=> Building science/py-rmf@py27 Started : Friday, 8 MAR 2019 at 07:23:40 UTC Platform: 5.5-DEVELOPMENT DragonFly v5.5.0.192.g15ae7f0-DEVELOPMENT #34: Tue Feb 19 09:07:07 PST 2019 root@pkgbox64.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 -------------------------------------------------- -- Environment -------------------------------------------------- UNAME_r=5.5-SYNTH UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=DragonFly 5.5-SYNTH UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 TERM=dumb PKG_CACHEDIR=/var/cache/pkg8 PKG_DBDIR=/var/db/pkg8 PORTSDIR=/xports LANG=C HOME=/root USER=root -------------------------------------------------- -- Options -------------------------------------------------- -------------------------------------------------- -- CONFIGURE_ENV -------------------------------------------------- PYTHON="/usr/local/bin/python2.7" XDG_DATA_HOME=/construction/science/py-rmf XDG_CONFIG_HOME=/construction/science/py-rmf HOME=/construction/science/py-rmf TMPDIR="/tmp" PATH=/construction/science/py-rmf/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc80 -------------------------------------------------- -- CONFIGURE_ARGS -------------------------------------------------- -------------------------------------------------- -- MAKE_ENV -------------------------------------------------- XDG_DATA_HOME=/construction/science/py-rmf XDG_CONFIG_HOME=/construction/science/py-rmf HOME=/construction/science/py-rmf TMPDIR="/tmp" PATH=/construction/science/py-rmf/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc80 PREFIX=/usr/local LOCALBASE=/usr/local NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -lRMF " LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" -------------------------------------------------- -- MAKE_ARGS -------------------------------------------------- DESTDIR=/construction/science/py-rmf/stage -------------------------------------------------- -- PLIST_SUB -------------------------------------------------- CMAKE_BUILD_TYPE="release" PYTHON_INCLUDEDIR=include/python2.7 PYTHON_LIBDIR=lib/python2.7 PYTHON_PLATFORM=dragonfly5 PYTHON_PYOEXTENSION=pyo PYTHON_SITELIBDIR=lib/python2.7/site-packages PYTHON_SUFFIX=27 PYTHON_VER=2.7 PYTHON_VERSION=python2.7 PYTHON2="" PYTHON3="@comment " OSREL=5.5 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/rmf" EXAMPLESDIR="share/examples/rmf" DATADIR="share/rmf" WWWDIR="www/rmf" ETCDIR="etc/rmf" -------------------------------------------------- -- SUB_LIST -------------------------------------------------- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/rmf DOCSDIR=/usr/local/share/doc/rmf EXAMPLESDIR=/usr/local/share/examples/rmf WWWDIR=/usr/local/www/rmf ETCDIR=/usr/local/etc/rmf -------------------------------------------------- -- /etc/make.conf -------------------------------------------------- SYNTHPROFILE=Release-BE USE_PACKAGE_DEPENDS_ONLY=yes PACKAGE_BUILDING=yes BATCH=yes PKG_CREATE_VERBOSE=yes PORTSDIR=/xports DISTDIR=/distfiles WRKDIRPREFIX=/construction PORT_DBDIR=/options PACKAGES=/packages MAKE_JOBS_NUMBER_LIMIT=5 LICENSES_ACCEPTED= NONE HAVE_COMPAT_IA32_KERN= CONFIGURE_MAX_CMD_LEN=262144 _PERL5_FROM_BIN=5.28.1 _ALTCCVERSION_921dbbb2=none _OBJC_ALTCCVERSION_921dbbb2=none _SMP_CPUS=8 UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=500500 OSVERSION=9999999 OSREL=5.5 _OSRELEASE=5.5-SYNTH PYTHONBASE=/usr/local _PKG_CHECKED=1 -------------------------------------------------------------------------------- -- Phase: check-sanity -------------------------------------------------------------------------------- ===> License APACHE20 accepted by the user -------------------------------------------------------------------------------- -- Phase: pkg-depends -------------------------------------------------------------------------------- ===> py27-rmf-1.1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.10.5_5.txz Installing pkg-1.10.5_5... Extracting pkg-1.10.5_5: .......... done ===> py27-rmf-1.1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py27-rmf-1.1 -------------------------------------------------------------------------------- -- Phase: fetch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: fetch -------------------------------------------------------------------------------- ===> License APACHE20 accepted by the user ===> Fetching all distfiles required by py27-rmf-1.1 for building -------------------------------------------------------------------------------- -- Phase: checksum -------------------------------------------------------------------------------- ===> License APACHE20 accepted by the user ===> Fetching all distfiles required by py27-rmf-1.1 for building => SHA256 Checksum OK for salilab-rmf-1.1-f917cf2_GH0.tar.gz. -------------------------------------------------------------------------------- -- Phase: extract-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: extract -------------------------------------------------------------------------------- ===> License APACHE20 accepted by the user ===> Fetching all distfiles required by py27-rmf-1.1 for building ===> Extracting for py27-rmf-1.1 => SHA256 Checksum OK for salilab-rmf-1.1-f917cf2_GH0.tar.gz. -------------------------------------------------------------------------------- -- Phase: patch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: patch -------------------------------------------------------------------------------- ===> Patching for py27-rmf-1.1 ===> Applying ports patches for py27-rmf-1.1 -------------------------------------------------------------------------------- -- Phase: build-depends -------------------------------------------------------------------------------- ===> py27-rmf-1.1 depends on executable: swig3.0 - not found ===> Installing existing package /packages/All/swig30-3.0.12.txz Installing swig30-3.0.12... `-- Installing lua52-5.2.4... | `-- Installing libedit-3.1.20181209_2,1... | | `-- Installing ncurses-6.1.20190112... | | `-- Extracting ncurses-6.1.20190112: .......... done | `-- Extracting libedit-3.1.20181209_2,1: .......... done `-- Extracting lua52-5.2.4: ......... done `-- Installing pcre-8.42_1... `-- Extracting pcre-8.42_1: .......... done Extracting swig30-3.0.12: .......... done ===> py27-rmf-1.1 depends on executable: swig3.0 - found ===> Returning to build of py27-rmf-1.1 ===> py27-rmf-1.1 depends on file: /usr/local/bin/cmake - not found ===> Installing existing package /packages/All/cmake-3.13.4.txz Installing cmake-3.13.4... `-- Installing curl-7.64.0_1... | `-- Installing ca_root_nss-3.42.1... | `-- Extracting ca_root_nss-3.42.1: ........ done | `-- Installing krb5-1.17_1... | | `-- Installing gettext-runtime-0.19.8.1_2... | | `-- Installing indexinfo-0.3.1... | | `-- Extracting indexinfo-0.3.1: .... done | | `-- Extracting gettext-runtime-0.19.8.1_2: .......... done | | `-- Installing libressl-2.8.3... | | `-- Extracting libressl-2.8.3: .......... done | | `-- Installing readline-7.0.5... | | `-- Extracting readline-7.0.5: .......... done | `-- Extracting krb5-1.17_1: .......... done | `-- Installing libnghttp2-1.36.0... | `-- Extracting libnghttp2-1.36.0: .......... done `-- Extracting curl-7.64.0_1: .......... done `-- Installing expat-2.2.6_1... `-- Extracting expat-2.2.6_1: .......... done `-- Installing jsoncpp-1.8.1_5... `-- Extracting jsoncpp-1.8.1_5: .......... done `-- Installing libarchive-3.3.3,1... | `-- Installing liblz4-1.8.3,1... | `-- Extracting liblz4-1.8.3,1: .......... done | `-- Installing lzo2-2.10_1... | `-- Extracting lzo2-2.10_1: .......... done `-- Extracting libarchive-3.3.3,1: .......... done `-- Installing libuv-1.26.0... `-- Extracting libuv-1.26.0: .......... done `-- Installing rhash-1.3.5... `-- Extracting rhash-1.3.5: .......... done Extracting cmake-3.13.4: .......... done Message from ca_root_nss-3.42.1: ********************************* WARNING ********************************* FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. *********************************** NOTE ********************************** This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem *************************************************************************** ===> py27-rmf-1.1 depends on file: /usr/local/bin/cmake - found ===> Returning to build of py27-rmf-1.1 ===> py27-rmf-1.1 depends on file: /usr/local/bin/python2.7 - not found ===> Installing existing package /packages/All/python27-2.7.15.txz Installing python27-2.7.15... `-- Installing libffi-3.2.1_3... `-- Extracting libffi-3.2.1_3: .......... done Extracting python27-2.7.15: .......... done Message from python27-2.7.15: =========================================================================== Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: bsddb databases/py-bsddb gdbm databases/py-gdbm sqlite3 databases/py-sqlite3 tkinter x11-toolkits/py-tkinter =========================================================================== ===> py27-rmf-1.1 depends on file: /usr/local/bin/python2.7 - found ===> Returning to build of py27-rmf-1.1 -------------------------------------------------------------------------------- -- Phase: lib-depends -------------------------------------------------------------------------------- ===> py27-rmf-1.1 depends on shared library: libRMF.so - not found ===> Installing existing package /packages/All/rmf-1.1_4.txz Installing rmf-1.1_4... `-- Installing boost-libs-1.69.0_1... | `-- Installing icu-63.1_1,1... | `-- Extracting icu-63.1_1,1: .......... done `-- Extracting boost-libs-1.69.0_1: .......... done `-- Installing hdf-szip-2.1.1... `-- Extracting hdf-szip-2.1.1: .......... done `-- Installing hdf5-1.10.1_2... `-- Extracting hdf5-1.10.1_2: .......... done Extracting rmf-1.1_4: .......... done Message from boost-libs-1.69.0_1: You have built the Boost library with thread support. Don't forget to add -pthread to your linker options when linking your code. ===> py27-rmf-1.1 depends on shared library: libRMF.so - found (/usr/local/lib/libRMF.so) ===> Returning to build of py27-rmf-1.1 -------------------------------------------------------------------------------- -- Phase: configure -------------------------------------------------------------------------------- ===> Configuring for py27-rmf-1.1 ===> Performing out-of-source build /bin/mkdir -p /construction/science/py-rmf/.build -- The C compiler identification is GNU 8.1.0 -- The CXX compiler identification is GNU 8.1.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Looking for pthread.h -- Looking for pthread.h - found -- Found Threads: TRUE -- Boost version: 1.69.0 -- Found the following Boost libraries: -- system -- filesystem -- thread -- program_options -- iostreams -- chrono -- date_time -- atomic -- regex -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/local/lib/libhdf5.so;/usr/local/lib/libsz.so;/usr/lib/libz.so;/usr/lib/libdl.so;/usr/lib/libm.so (found version "1.10.1") -- Found HDF5: /usr/local/lib/libhdf5.so;/usr/local/lib/libsz.so;/usr/lib/libz.so;/usr/lib/libdl.so;/usr/lib/libm.so (found suitable version "1.10.1", minimum required is "1.8") -- Deprecated backends (and hdf5) are enabled -- GCC version: 8.1 -- Enabling g++ C++11 support -- GCC version: 8.1 -- No conversion issue -- Running Making RMF/HDF5.h -- Updating /construction/science/py-rmf/.build/include/RMF/HDF5.h -- Running Making RMF.h -- Updating /construction/science/py-rmf/.build/include/RMF.h -- Running setup_cmake.py -- Running Running setup_cmake.py -- Updating ./test/Files.cmake Updating ./bin/Files.cmake Updating ./examples/Files.cmake Updating ./src/Files.cmake Updating ./tools/dev_tools/test/Files.cmake Updating ./benchmark/Files.cmake -- Logging disabled -- Found SWIG: /usr/local/bin/swig3.0 (found suitable version "3.0.12", minimum required is "1.3.40") -- Python binary is /construction/science/py-rmf/.bin/python (version 2.7.15) -- Found PythonLibs: /usr/local/lib/libpython2.7.so (found suitable exact version "2.7.15") CMake Warning (dev) at /usr/local/share/cmake/Modules/UseSWIG.cmake:564 (message): Policy CMP0078 is not set. Run "cmake --help-policy CMP0078" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): swig/CMakeLists.txt:45 (SWIG_ADD_LIBRARY) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at /usr/local/share/cmake/Modules/UseSWIG.cmake:564 (message): Policy CMP0078 is not set. Run "cmake --help-policy CMP0078" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): swig/CMakeLists.txt:84 (SWIG_ADD_LIBRARY) This warning is for project developers. Use -Wno-dev to suppress it. -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_CXX_FLAGS_DEBUG CMAKE_C_FLAGS_DEBUG CMAKE_C_FLAGS_RELEASE CMAKE_EXE_LINKER_FLAGS CMAKE_SHARED_LINKER_FLAGS -- Build files have been written to: /construction/science/py-rmf/.build -------------------------------------------------------------------------------- -- Phase: build -------------------------------------------------------------------------------- ===> Building for py27-rmf-1.1 /usr/local/bin/cmake -S/construction/science/py-rmf/rmf-f917cf2 -B/construction/science/py-rmf/.build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/local/bin/cmake -E cmake_progress_start /construction/science/py-rmf/.build/CMakeFiles /construction/science/py-rmf/.build/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all --- include/CMakeFiles/RMF-decorators.dir/all --- --- swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/all --- --- include/CMakeFiles/RMF-decorators.dir/all --- /usr/bin/make -f include/CMakeFiles/RMF-decorators.dir/build.make include/CMakeFiles/RMF-decorators.dir/depend --- swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/all --- /usr/bin/make -f swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/build.make swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/depend --- include/CMakeFiles/RMF-decorators.dir/all --- --- include/CMakeFiles/RMF-decorators.dir/depend --- --- swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/all --- --- swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/depend --- --- include/CMakeFiles/RMF-decorators.dir/all --- cd /construction/science/py-rmf/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/py-rmf/rmf-f917cf2 /construction/science/py-rmf/rmf-f917cf2/include /construction/science/py-rmf/.build /construction/science/py-rmf/.build/include /construction/science/py-rmf/.build/include/CMakeFiles/RMF-decorators.dir/DependInfo.cmake --- swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/all --- cd /construction/science/py-rmf/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/py-rmf/rmf-f917cf2 /construction/science/py-rmf/rmf-f917cf2/swig /construction/science/py-rmf/.build /construction/science/py-rmf/.build/swig /construction/science/py-rmf/.build/swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/DependInfo.cmake --- include/CMakeFiles/RMF-decorators.dir/all --- Scanning dependencies of target RMF-decorators /usr/bin/make -f include/CMakeFiles/RMF-decorators.dir/build.make include/CMakeFiles/RMF-decorators.dir/build --- include/RMF/decorator/physics.h --- [ 14%] Making decorator headers python /construction/science/py-rmf/rmf-f917cf2/tools/build/make_decorators.py --- swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/all --- Scanning dependencies of target RMF_HDF5_swig_compilation /usr/bin/make -f swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/build.make swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/build --- swig/CMakeFiles/_RMF_HDF5.dir/RMF_HDF5PYTHON.stamp --- [ 28%] Swig compile RMF_HDF5.i for python cd /construction/science/py-rmf/.build/swig && /usr/local/bin/cmake -E make_directory /construction/science/py-rmf/.build/lib /construction/science/py-rmf/.build/lib cd /construction/science/py-rmf/.build/swig && /usr/local/bin/cmake -E touch /construction/science/py-rmf/.build/swig/CMakeFiles/_RMF_HDF5.dir/RMF_HDF5PYTHON.stamp cd /construction/science/py-rmf/.build/swig && /usr/local/bin/cmake -E env SWIG_LIB=/usr/local/share/swig/3.0.12 /usr/local/bin/swig3.0 -python -castmode -naturalvar -Wextra -fvirtual -DPySwigIterator=RMF_HDF5_PySwigIterator -c++ -DSwigPyIterator=RMF_HDF5_SwigPyIterator -DRMFEXPORT -outdir /construction/science/py-rmf/.build/lib -c++ -I/construction/science/py-rmf/rmf-f917cf2/swig -I/construction/science/py-rmf/rmf-f917cf2/include -I/construction/science/py-rmf/.build/include -I/usr/local/include -I/usr/local/include/python2.7 -o /construction/science/py-rmf/.build/lib/RMF_HDF5PYTHON_wrap.cxx /construction/science/py-rmf/rmf-f917cf2/swig/RMF_HDF5.i --- include/CMakeFiles/RMF-decorators.dir/all --- Exception in thread Thread-4 (most likely raised during interpreter shutdown): [ 28%] Built target RMF-decorators --- swig/CMakeFiles/RMF_swig_compilation.dir/all --- /usr/bin/make -f swig/CMakeFiles/RMF_swig_compilation.dir/build.make swig/CMakeFiles/RMF_swig_compilation.dir/depend --- swig/CMakeFiles/RMF_swig_compilation.dir/depend --- cd /construction/science/py-rmf/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/py-rmf/rmf-f917cf2 /construction/science/py-rmf/rmf-f917cf2/swig /construction/science/py-rmf/.build /construction/science/py-rmf/.build/swig /construction/science/py-rmf/.build/swig/CMakeFiles/RMF_swig_compilation.dir/DependInfo.cmake Scanning dependencies of target RMF_swig_compilation /usr/bin/make -f swig/CMakeFiles/RMF_swig_compilation.dir/build.make swig/CMakeFiles/RMF_swig_compilation.dir/build --- swig/CMakeFiles/_RMF.dir/RMFPYTHON.stamp --- [ 42%] Swig compile RMF.i for python cd /construction/science/py-rmf/.build/swig && /usr/local/bin/cmake -E make_directory /construction/science/py-rmf/.build/lib /construction/science/py-rmf/.build/lib cd /construction/science/py-rmf/.build/swig && /usr/local/bin/cmake -E touch /construction/science/py-rmf/.build/swig/CMakeFiles/_RMF.dir/RMFPYTHON.stamp cd /construction/science/py-rmf/.build/swig && /usr/local/bin/cmake -E env SWIG_LIB=/usr/local/share/swig/3.0.12 /usr/local/bin/swig3.0 -python -castmode -naturalvar -Wextra -fvirtual -DPySwigIterator=RMF_PySwigIterator -c++ -DSwigPyIterator=RMF_SwigPyIterator -DRMFEXPORT -outdir /construction/science/py-rmf/.build/lib -c++ -I/construction/science/py-rmf/rmf-f917cf2/swig -I/construction/science/py-rmf/rmf-f917cf2/include -I/construction/science/py-rmf/.build/include -I/usr/local/include -I/usr/local/include/python2.7 -o /construction/science/py-rmf/.build/lib/RMFPYTHON_wrap.cxx /construction/science/py-rmf/rmf-f917cf2/swig/RMF.i /construction/science/py-rmf/rmf-f917cf2/include/RMF/BufferConstHandle.h:48: Warning 467: Overloaded method RMF::BufferConstHandle::BufferConstHandle(std::vector< char,std::allocator< char > > const &) not supported (incomplete type checking rule - no precedence level in typecheck typemap for 'std::vector< char,std::allocator< char > > const &'). --- swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/all --- [ 42%] Built target RMF_HDF5_swig_compilation --- swig/CMakeFiles/_RMF_HDF5.dir/all --- /usr/bin/make -f swig/CMakeFiles/_RMF_HDF5.dir/build.make swig/CMakeFiles/_RMF_HDF5.dir/depend --- swig/CMakeFiles/_RMF_HDF5.dir/depend --- cd /construction/science/py-rmf/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/py-rmf/rmf-f917cf2 /construction/science/py-rmf/rmf-f917cf2/swig /construction/science/py-rmf/.build /construction/science/py-rmf/.build/swig /construction/science/py-rmf/.build/swig/CMakeFiles/_RMF_HDF5.dir/DependInfo.cmake Scanning dependencies of target _RMF_HDF5 /usr/bin/make -f swig/CMakeFiles/_RMF_HDF5.dir/build.make swig/CMakeFiles/_RMF_HDF5.dir/build --- swig/CMakeFiles/_RMF_HDF5.dir/__/lib/RMF_HDF5PYTHON_wrap.cxx.o --- [ 57%] Building CXX object swig/CMakeFiles/_RMF_HDF5.dir/__/lib/RMF_HDF5PYTHON_wrap.cxx.o cd /construction/science/py-rmf/.build/swig && /usr/bin/c++ -DRMF_SWIG_WRAPPER -D_RMF_HDF5_EXPORTS -I/construction/science/py-rmf/rmf-f917cf2/swig -I/construction/science/py-rmf/rmf-f917cf2/include -I/construction/science/py-rmf/.build/include -I/usr/local/include -I/usr/local/include/python2.7 -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -fPIC --std=c++11 -o CMakeFiles/_RMF_HDF5.dir/__/lib/RMF_HDF5PYTHON_wrap.cxx.o -c /construction/science/py-rmf/.build/lib/RMF_HDF5PYTHON_wrap.cxx --- swig/CMakeFiles/RMF_swig_compilation.dir/all --- [ 57%] Built target RMF_swig_compilation --- swig/CMakeFiles/_RMF.dir/all --- /usr/bin/make -f swig/CMakeFiles/_RMF.dir/build.make swig/CMakeFiles/_RMF.dir/depend --- swig/CMakeFiles/_RMF.dir/depend --- cd /construction/science/py-rmf/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/py-rmf/rmf-f917cf2 /construction/science/py-rmf/rmf-f917cf2/swig /construction/science/py-rmf/.build /construction/science/py-rmf/.build/swig /construction/science/py-rmf/.build/swig/CMakeFiles/_RMF.dir/DependInfo.cmake Scanning dependencies of target _RMF /usr/bin/make -f swig/CMakeFiles/_RMF.dir/build.make swig/CMakeFiles/_RMF.dir/build --- swig/CMakeFiles/_RMF.dir/__/lib/RMFPYTHON_wrap.cxx.o --- [ 71%] Building CXX object swig/CMakeFiles/_RMF.dir/__/lib/RMFPYTHON_wrap.cxx.o cd /construction/science/py-rmf/.build/swig && /usr/bin/c++ -DRMF_SWIG_WRAPPER -D_RMF_EXPORTS -I/construction/science/py-rmf/rmf-f917cf2/swig -I/construction/science/py-rmf/rmf-f917cf2/include -I/construction/science/py-rmf/.build/include -I/usr/local/include -I/usr/local/include/python2.7 -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -fPIC --std=c++11 -o CMakeFiles/_RMF.dir/__/lib/RMFPYTHON_wrap.cxx.o -c /construction/science/py-rmf/.build/lib/RMFPYTHON_wrap.cxx --- swig/CMakeFiles/_RMF_HDF5.dir/all --- /construction/science/py-rmf/.build/lib/RMF_HDF5PYTHON_wrap.cxx: In function 'void SWIG_Python_addvarlink(PyObject*, char*, PyObject* (*)(), int (*)(PyObject*))': /construction/science/py-rmf/.build/lib/RMF_HDF5PYTHON_wrap.cxx:89319:16: warning: 'char* strncpy(char*, const char*, size_t)' specified bound depends on the length of the source argument [-Wstringop-overflow=] strncpy(gv->name,name,size); ~~~~~~~^~~~~~~~~~~~~~~~~~~~ /construction/science/py-rmf/.build/lib/RMF_HDF5PYTHON_wrap.cxx:89316:27: note: length computed here size_t size = strlen(name)+1; ~~~~~~^~~~~~ --- swig/CMakeFiles/_RMF.dir/all --- /construction/science/py-rmf/.build/lib/RMFPYTHON_wrap.cxx: In function 'void SWIG_Python_addvarlink(PyObject*, char*, PyObject* (*)(), int (*)(PyObject*))': /construction/science/py-rmf/.build/lib/RMFPYTHON_wrap.cxx:169725:16: warning: 'char* strncpy(char*, const char*, size_t)' specified bound depends on the length of the source argument [-Wstringop-overflow=] strncpy(gv->name,name,size); ~~~~~~~^~~~~~~~~~~~~~~~~~~~ /construction/science/py-rmf/.build/lib/RMFPYTHON_wrap.cxx:169722:27: note: length computed here size_t size = strlen(name)+1; ~~~~~~^~~~~~ --- swig/CMakeFiles/_RMF_HDF5.dir/all --- --- lib/_RMF_HDF5.so --- [ 85%] Linking CXX shared module ../lib/_RMF_HDF5.so cd /construction/science/py-rmf/.build/swig && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/_RMF_HDF5.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -lRMF -shared -o ../lib/_RMF_HDF5.so CMakeFiles/_RMF_HDF5.dir/__/lib/RMF_HDF5PYTHON_wrap.cxx.o -L/usr/local/lib [ 85%] Built target _RMF_HDF5 --- swig/CMakeFiles/_RMF.dir/all --- --- lib/_RMF.so --- [100%] Linking CXX shared module ../lib/_RMF.so cd /construction/science/py-rmf/.build/swig && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/_RMF.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -lRMF -shared -o ../lib/_RMF.so CMakeFiles/_RMF.dir/__/lib/RMFPYTHON_wrap.cxx.o -L/usr/local/lib [100%] Built target _RMF /usr/local/bin/cmake -E cmake_progress_start /construction/science/py-rmf/.build/CMakeFiles 0 -------------------------------------------------------------------------------- -- Phase: run-depends -------------------------------------------------------------------------------- ===> py27-rmf-1.1 depends on file: /usr/local/bin/python2.7 - found -------------------------------------------------------------------------------- -- Phase: stage -------------------------------------------------------------------------------- ===> Staging for py27-rmf-1.1 ===> Generating temporary packing list /usr/local/bin/cmake -S/construction/science/py-rmf/rmf-f917cf2 -B/construction/science/py-rmf/.build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/local/bin/cmake -E cmake_progress_start /construction/science/py-rmf/.build/CMakeFiles /construction/science/py-rmf/.build/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all /usr/bin/make -f include/CMakeFiles/RMF-decorators.dir/build.make include/CMakeFiles/RMF-decorators.dir/depend cd /construction/science/py-rmf/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/py-rmf/rmf-f917cf2 /construction/science/py-rmf/rmf-f917cf2/include /construction/science/py-rmf/.build /construction/science/py-rmf/.build/include /construction/science/py-rmf/.build/include/CMakeFiles/RMF-decorators.dir/DependInfo.cmake /usr/bin/make -f include/CMakeFiles/RMF-decorators.dir/build.make include/CMakeFiles/RMF-decorators.dir/build [ 14%] Built target RMF-decorators /usr/bin/make -f swig/CMakeFiles/RMF_swig_compilation.dir/build.make swig/CMakeFiles/RMF_swig_compilation.dir/depend cd /construction/science/py-rmf/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/py-rmf/rmf-f917cf2 /construction/science/py-rmf/rmf-f917cf2/swig /construction/science/py-rmf/.build /construction/science/py-rmf/.build/swig /construction/science/py-rmf/.build/swig/CMakeFiles/RMF_swig_compilation.dir/DependInfo.cmake /usr/bin/make -f swig/CMakeFiles/RMF_swig_compilation.dir/build.make swig/CMakeFiles/RMF_swig_compilation.dir/build [ 28%] Built target RMF_swig_compilation /usr/bin/make -f swig/CMakeFiles/_RMF.dir/build.make swig/CMakeFiles/_RMF.dir/depend cd /construction/science/py-rmf/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/py-rmf/rmf-f917cf2 /construction/science/py-rmf/rmf-f917cf2/swig /construction/science/py-rmf/.build /construction/science/py-rmf/.build/swig /construction/science/py-rmf/.build/swig/CMakeFiles/_RMF.dir/DependInfo.cmake /usr/bin/make -f swig/CMakeFiles/_RMF.dir/build.make swig/CMakeFiles/_RMF.dir/build [ 57%] Built target _RMF /usr/bin/make -f swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/build.make swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/depend cd /construction/science/py-rmf/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/py-rmf/rmf-f917cf2 /construction/science/py-rmf/rmf-f917cf2/swig /construction/science/py-rmf/.build /construction/science/py-rmf/.build/swig /construction/science/py-rmf/.build/swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/DependInfo.cmake /usr/bin/make -f swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/build.make swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/build [ 71%] Built target RMF_HDF5_swig_compilation /usr/bin/make -f swig/CMakeFiles/_RMF_HDF5.dir/build.make swig/CMakeFiles/_RMF_HDF5.dir/depend cd /construction/science/py-rmf/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/py-rmf/rmf-f917cf2 /construction/science/py-rmf/rmf-f917cf2/swig /construction/science/py-rmf/.build /construction/science/py-rmf/.build/swig /construction/science/py-rmf/.build/swig/CMakeFiles/_RMF_HDF5.dir/DependInfo.cmake /usr/bin/make -f swig/CMakeFiles/_RMF_HDF5.dir/build.make swig/CMakeFiles/_RMF_HDF5.dir/build [100%] Built target _RMF_HDF5 /usr/local/bin/cmake -E cmake_progress_start /construction/science/py-rmf/.build/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall Installing the project stripped... /usr/local/bin/cmake -DCMAKE_INSTALL_DO_STRIP=1 -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /construction/science/py-rmf/stage/usr/local/lib/python2.7/site-packages/_RMF.so -- Installing: /construction/science/py-rmf/stage/usr/local/lib/python2.7/site-packages/RMF.py -- Installing: /construction/science/py-rmf/stage/usr/local/lib/python2.7/site-packages/_RMF_HDF5.so -- Installing: /construction/science/py-rmf/stage/usr/local/lib/python2.7/site-packages/RMF_HDF5.py ====> Compressing man pages (compress-man) -------------------------------------------------------------------------------- -- Phase: package -------------------------------------------------------------------------------- ===> Building package for py27-rmf-1.1 file sizes/checksums [7]: . done packing files [7]: . done packing directories [0]: . done -------------------------------------------------- -- Termination -------------------------------------------------- Finished: Friday, 8 MAR 2019 at 07:30:30 UTC Duration: 00:06:49