=> Building science/py-phonopy@py36 Started : Thursday, 7 MAR 2019 at 13:02:01 UTC Platform: 5.5-DEVELOPMENT DragonFly v5.5.0.192.g15ae7f0-DEVELOPMENT #34: Tue Feb 19 09:07:07 PST 2019 root@pkgbox64.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 -------------------------------------------------- -- Environment -------------------------------------------------- UNAME_r=5.5-SYNTH UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=DragonFly 5.5-SYNTH UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 TERM=dumb PKG_CACHEDIR=/var/cache/pkg8 PKG_DBDIR=/var/db/pkg8 PORTSDIR=/xports LANG=C HOME=/root USER=root -------------------------------------------------- -- Options -------------------------------------------------- -------------------------------------------------- -- CONFIGURE_ENV -------------------------------------------------- PYTHON="/usr/local/bin/python3.6" XDG_DATA_HOME=/construction/science/py-phonopy XDG_CONFIG_HOME=/construction/science/py-phonopy HOME=/construction/science/py-phonopy TMPDIR="/tmp" PATH=/construction/science/py-phonopy/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc80 -------------------------------------------------- -- CONFIGURE_ARGS -------------------------------------------------- -------------------------------------------------- -- MAKE_ENV -------------------------------------------------- XDG_DATA_HOME=/construction/science/py-phonopy XDG_CONFIG_HOME=/construction/science/py-phonopy HOME=/construction/science/py-phonopy TMPDIR="/tmp" PATH=/construction/science/py-phonopy/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc80 LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local LOCALBASE=/usr/local NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" " LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" -------------------------------------------------- -- MAKE_ARGS -------------------------------------------------- DESTDIR=/construction/science/py-phonopy/stage -------------------------------------------------- -- PLIST_SUB -------------------------------------------------- PYTHON_INCLUDEDIR=include/python3.6m PYTHON_LIBDIR=lib/python3.6 PYTHON_PLATFORM=dragonfly5 PYTHON_PYOEXTENSION=opt-1.pyc PYTHON_SITELIBDIR=lib/python3.6/site-packages PYTHON_SUFFIX=36 PYTHON_VER=3.6 PYTHON_VERSION=python3.6 PYTHON2="@comment " PYTHON3="" OSREL=5.5 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/phonopy" EXAMPLESDIR="share/examples/phonopy" DATADIR="share/phonopy" WWWDIR="www/phonopy" ETCDIR="etc/phonopy" -------------------------------------------------- -- SUB_LIST -------------------------------------------------- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/phonopy DOCSDIR=/usr/local/share/doc/phonopy EXAMPLESDIR=/usr/local/share/examples/phonopy WWWDIR=/usr/local/www/phonopy ETCDIR=/usr/local/etc/phonopy -------------------------------------------------- -- /etc/make.conf -------------------------------------------------- SYNTHPROFILE=Release-BE USE_PACKAGE_DEPENDS_ONLY=yes PACKAGE_BUILDING=yes BATCH=yes PKG_CREATE_VERBOSE=yes PORTSDIR=/xports DISTDIR=/distfiles WRKDIRPREFIX=/construction PORT_DBDIR=/options PACKAGES=/packages MAKE_JOBS_NUMBER_LIMIT=5 LICENSES_ACCEPTED= NONE HAVE_COMPAT_IA32_KERN= CONFIGURE_MAX_CMD_LEN=262144 _PERL5_FROM_BIN=5.26.2 _ALTCCVERSION_921dbbb2=none _OBJC_ALTCCVERSION_921dbbb2=none _SMP_CPUS=8 UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=500500 OSVERSION=9999999 OSREL=5.5 _OSRELEASE=5.5-SYNTH PYTHONBASE=/usr/local _PKG_CHECKED=1 -------------------------------------------------------------------------------- -- Phase: check-sanity -------------------------------------------------------------------------------- ===> License BSD3CLAUSE accepted by the user -------------------------------------------------------------------------------- -- Phase: pkg-depends -------------------------------------------------------------------------------- ===> py36-phonopy-1.13.2.107_1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.10.5_5.txz Installing pkg-1.10.5_5... Extracting pkg-1.10.5_5: .......... done ===> py36-phonopy-1.13.2.107_1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py36-phonopy-1.13.2.107_1 -------------------------------------------------------------------------------- -- Phase: fetch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: fetch -------------------------------------------------------------------------------- ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by py36-phonopy-1.13.2.107_1 for building -------------------------------------------------------------------------------- -- Phase: checksum -------------------------------------------------------------------------------- ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by py36-phonopy-1.13.2.107_1 for building => SHA256 Checksum OK for phonopy-1.13.2.107.tar.gz. -------------------------------------------------------------------------------- -- Phase: extract-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: extract -------------------------------------------------------------------------------- ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by py36-phonopy-1.13.2.107_1 for building ===> Extracting for py36-phonopy-1.13.2.107_1 => SHA256 Checksum OK for phonopy-1.13.2.107.tar.gz. -------------------------------------------------------------------------------- -- Phase: patch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: patch -------------------------------------------------------------------------------- ===> Patching for py36-phonopy-1.13.2.107_1 -------------------------------------------------------------------------------- -- Phase: build-depends -------------------------------------------------------------------------------- ===> py36-phonopy-1.13.2.107_1 depends on package: py36-numpy>0 - not found ===> Installing existing package /packages/All/py36-numpy-1.16.1,1.txz Installing py36-numpy-1.16.1,1... `-- Installing gcc5-5.5.0_6... | `-- Installing binutils-2.32,1... | | `-- Installing gettext-runtime-0.19.8.1_2... | | `-- Installing indexinfo-0.3.1... | | `-- Extracting indexinfo-0.3.1: .... done | | `-- Extracting gettext-runtime-0.19.8.1_2: .......... done | `-- Extracting binutils-2.32,1: .......... done | `-- Installing gmp-6.1.2_1... | `-- Extracting gmp-6.1.2_1: .......... done | `-- Installing mpc-1.1.0_2... | | `-- Installing mpfr-4.0.2... | | `-- Extracting mpfr-4.0.2: .......... done | `-- Extracting mpc-1.1.0_2: ......... done `-- Extracting gcc5-5.5.0_6: .......... done `-- Installing openblas-0.2.20_7,1... `-- Extracting openblas-0.2.20_7,1: ......... done `-- Installing py36-setuptools-40.8.0... | `-- Installing python36-3.6.8... | | `-- Installing expat-2.2.6_1... | | `-- Extracting expat-2.2.6_1: .......... done | | `-- Installing libffi-3.2.1_3... | | `-- Extracting libffi-3.2.1_3: .......... done | | `-- Installing libressl-2.8.3... | | `-- Extracting libressl-2.8.3: .......... done | | `-- Installing ncurses-6.1.20190112... | | `-- Extracting ncurses-6.1.20190112: .......... done | | `-- Installing readline-7.0.5... | | `-- Extracting readline-7.0.5: .......... done | `-- Extracting python36-3.6.8: .......... done `-- Extracting py36-setuptools-40.8.0: .......... done `-- Installing suitesparse-5.2.0_2... | `-- Installing lapack-3.5.0_6... | | `-- Installing blas-3.5.0_5... | | `-- Extracting blas-3.5.0_5: ....... done | `-- Extracting lapack-3.5.0_6: .......... done | `-- Installing metis-5.1.0_7... | `-- Extracting metis-5.1.0_7: .......... done `-- Extracting suitesparse-5.2.0_2: .......... done Extracting py36-numpy-1.16.1,1: .......... done Message from gcc5-5.5.0_6: To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc5 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===> NOTICE: This port is deprecated; you may wish to reconsider installing it: Unsupported by upstream. Use GCC 7 or newer instead.. Message from python36-3.6.8: =========================================================================== Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py36-gdbm databases/py-gdbm@py36 py36-sqlite3 databases/py-sqlite3@py36 py36-tkinter x11-toolkits/py-tkinter@py36 =========================================================================== Message from py36-setuptools-40.8.0: ******************************************************************* Only /usr/local/bin/easy_install-3.6 script has been installed since Python 3.6 is not the default Python version. ******************************************************************* Message from metis-5.1.0_7: ===> NOTICE: The metis port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> py36-phonopy-1.13.2.107_1 depends on package: py36-numpy>0 - found ===> Returning to build of py36-phonopy-1.13.2.107_1 ===> py36-phonopy-1.13.2.107_1 depends on package: py36-h5py>0 - not found ===> Installing existing package /packages/All/py36-h5py-2.9.0_1.txz Installing py36-h5py-2.9.0_1... `-- Installing hdf5-1.10.1_2... | `-- Installing hdf-szip-2.1.1... | `-- Extracting hdf-szip-2.1.1: .......... done `-- Extracting hdf5-1.10.1_2: .......... done `-- Installing py36-six-1.12.0... `-- Extracting py36-six-1.12.0: .......... done Extracting py36-h5py-2.9.0_1: .......... done ===> py36-phonopy-1.13.2.107_1 depends on package: py36-h5py>0 - found ===> Returning to build of py36-phonopy-1.13.2.107_1 ===> py36-phonopy-1.13.2.107_1 depends on package: py36-matplotlib>0 - not found ===> Installing existing package /packages/All/py36-matplotlib-2.1.2_5.txz Installing py36-matplotlib-2.1.2_5... `-- Installing fontconfig-2.12.6,1... | `-- Installing freetype2-2.9.1... | `-- Extracting freetype2-2.9.1: .......... done `-- Extracting fontconfig-2.12.6,1: .......... done Running fc-cache to build fontconfig cache... /usr/local/share/fonts: skipping, no such directory /usr/local/lib/X11/fonts: skipping, no such directory /var/db/fontconfig: cleaning cache directory fc-cache: succeeded `-- Installing png-1.6.36... `-- Extracting png-1.6.36: .......... done `-- Installing py36-cycler-0.10.0... `-- Extracting py36-cycler-0.10.0: .......... done `-- Installing py36-dateutil-2.7.3... `-- Extracting py36-dateutil-2.7.3: .......... done `-- Installing py36-pyparsing-2.3.1... `-- Extracting py36-pyparsing-2.3.1: .......... done `-- Installing py36-pytz-2018.9,1... `-- Extracting py36-pytz-2018.9,1: .......... done `-- Installing py36-tkinter-3.6.8_6... | `-- Installing tcl86-8.6.9_1... | `-- Extracting tcl86-8.6.9_1: .......... done | `-- Installing tk86-8.6.9_1... | | `-- Installing libX11-1.6.7,1... | | `-- Installing libXau-1.0.8_5... | | `-- Extracting libXau-1.0.8_5: .......... done | | `-- Installing libXdmcp-1.1.2_2... | | | `-- Installing xorgproto-2018.4... | | | `-- Extracting xorgproto-2018.4: .......... done | | `-- Extracting libXdmcp-1.1.2_2: ......... done | | `-- Installing libxcb-1.13.1... | | | `-- Installing libpthread-stubs-0.4... | | | `-- Extracting libpthread-stubs-0.4: .... done | | | `-- Installing libxml2-2.9.8... | | | `-- Extracting libxml2-2.9.8: .......... done | | `-- Extracting libxcb-1.13.1: .......... done | | `-- Extracting libX11-1.6.7,1: .......... done | | `-- Installing libXScrnSaver-1.2.3_2... | | `-- Installing libXext-1.3.3_3,1... | | `-- Extracting libXext-1.3.3_3,1: .......... done | | `-- Extracting libXScrnSaver-1.2.3_2: .......... done | | `-- Installing libXft-2.3.2_3... | | `-- Installing libXrender-0.9.10_2... | | `-- Extracting libXrender-0.9.10_2: .......... done | | `-- Extracting libXft-2.3.2_3: .......... done | `-- Extracting tk86-8.6.9_1: .......... done `-- Extracting py36-tkinter-3.6.8_6: ........ done `-- Installing py36-tornado-5.1.1... `-- Extracting py36-tornado-5.1.1: .......... done Extracting py36-matplotlib-2.1.2_5: .......... done Message from freetype2-2.9.1: The 2.7.x series now uses the new subpixel hinting mode (V40 port's option) as the default, emulating a modern version of ClearType. This change inevitably leads to different rendering results, and you might change port's options to adapt it to your taste (or use the new "FREETYPE_PROPERTIES" environment variable). The environment variable "FREETYPE_PROPERTIES" can be used to control the driver properties. Example: FREETYPE_PROPERTIES=truetype:interpreter-version=35 \ cff:no-stem-darkening=1 \ autofitter:warping=1 This allows to select, say, the subpixel hinting mode at runtime for a given application. The controllable properties are listed in the section "Controlling FreeType Modules" in the reference's table of contents (/usr/local/share/doc/freetype2/reference/ft2-toc.html, if documentation was installed). ===> py36-phonopy-1.13.2.107_1 depends on package: py36-matplotlib>0 - found ===> Returning to build of py36-phonopy-1.13.2.107_1 ===> py36-phonopy-1.13.2.107_1 depends on package: py36-yaml>0 - not found ===> Installing existing package /packages/All/py36-yaml-3.13.txz Installing py36-yaml-3.13... Extracting py36-yaml-3.13: .......... done ===> py36-phonopy-1.13.2.107_1 depends on package: py36-yaml>0 - found ===> Returning to build of py36-phonopy-1.13.2.107_1 ===> py36-phonopy-1.13.2.107_1 depends on executable: cython-3.6 - not found ===> Installing existing package /packages/All/py36-cython-0.29.txz Installing py36-cython-0.29... Extracting py36-cython-0.29: .......... done ===> py36-phonopy-1.13.2.107_1 depends on executable: cython-3.6 - found ===> Returning to build of py36-phonopy-1.13.2.107_1 ===> py36-phonopy-1.13.2.107_1 depends on package: py36-setuptools>0 - found ===> py36-phonopy-1.13.2.107_1 depends on file: /usr/local/bin/python3.6 - found -------------------------------------------------------------------------------- -- Phase: lib-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: configure -------------------------------------------------------------------------------- ===> Configuring for py36-phonopy-1.13.2.107_1 setuptools is used. running config -------------------------------------------------------------------------------- -- Phase: build -------------------------------------------------------------------------------- ===> Building for py36-phonopy-1.13.2.107_1 setuptools is used. running build running build_py creating build creating build/lib.dragonfly-5.5-SYNTH-x86_64-3.6 creating build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy copying phonopy/__init__.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy copying phonopy/api_gruneisen.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy copying phonopy/api_phonopy.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy copying phonopy/api_qha.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy copying phonopy/file_IO.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy copying phonopy/units.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy copying phonopy/version.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy creating build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/cui copying phonopy/cui/__init__.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/cui copying phonopy/cui/load.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/cui copying phonopy/cui/phonopy_argparse.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/cui copying phonopy/cui/settings.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/cui copying phonopy/cui/show_symmetry.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/cui creating build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/gruneisen copying phonopy/gruneisen/__init__.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/gruneisen copying phonopy/gruneisen/band_structure.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/gruneisen copying phonopy/gruneisen/core.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/gruneisen copying phonopy/gruneisen/mesh.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/gruneisen copying phonopy/gruneisen/thermal_properties.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/gruneisen creating build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/harmonic copying phonopy/harmonic/__init__.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/harmonic copying phonopy/harmonic/derivative_dynmat.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/harmonic copying phonopy/harmonic/displacement.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/harmonic copying phonopy/harmonic/dynamical_matrix.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/harmonic copying phonopy/harmonic/dynmat_to_fc.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/harmonic copying phonopy/harmonic/force_constants.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/harmonic copying phonopy/harmonic/forces.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/harmonic creating build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/interface copying phonopy/interface/FHIaims.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/interface copying phonopy/interface/__init__.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/interface copying phonopy/interface/abinit.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/interface copying phonopy/interface/cif.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/interface copying phonopy/interface/cp2k.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/interface copying phonopy/interface/crystal.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/interface copying phonopy/interface/elk.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/interface copying phonopy/interface/phonopy_yaml.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/interface copying phonopy/interface/qe.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/interface copying phonopy/interface/siesta.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/interface copying phonopy/interface/vasp.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/interface copying phonopy/interface/wien2k.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/interface creating build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon copying phonopy/phonon/__init__.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon copying phonopy/phonon/animation.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon copying phonopy/phonon/band_structure.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon copying phonopy/phonon/degeneracy.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon copying phonopy/phonon/dos.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon copying phonopy/phonon/group_velocity.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon copying phonopy/phonon/irreps.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon copying phonopy/phonon/mesh.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon copying phonopy/phonon/modulation.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon copying phonopy/phonon/moment.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon copying phonopy/phonon/qpoints.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon copying phonopy/phonon/tetrahedron_mesh.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon copying phonopy/phonon/thermal_displacement.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon copying phonopy/phonon/thermal_properties.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon creating build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/qha copying phonopy/qha/__init__.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/qha copying phonopy/qha/core.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/qha copying phonopy/qha/electron.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/qha copying phonopy/qha/eos.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/qha creating build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/spectrum copying phonopy/spectrum/__init__.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/spectrum copying phonopy/spectrum/dynamic_structure_factor.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/spectrum copying phonopy/spectrum/velocity.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/spectrum creating build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/structure copying phonopy/structure/__init__.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/structure copying phonopy/structure/atoms.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/structure copying phonopy/structure/brillouin_zone.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/structure copying phonopy/structure/cells.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/structure copying phonopy/structure/grid_points.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/structure copying phonopy/structure/spglib.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/structure copying phonopy/structure/symmetry.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/structure copying phonopy/structure/tetrahedron_method.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/structure creating build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/unfolding copying phonopy/unfolding/__init__.py -> build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/unfolding running build_ext building 'phonopy._phonopy' extension creating build/temp.dragonfly-5.5-SYNTH-x86_64-3.6 creating build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c creating build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/harmonic creating build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/kspclib cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/harmonic_h -Ic/kspclib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/_phonopy.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/_phonopy.o In file included from /usr/local/lib/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/local/lib/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from c/_phonopy.c:39: /usr/local/lib/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/harmonic_h -Ic/kspclib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/harmonic/dynmat.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/harmonic/dynmat.o cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/harmonic_h -Ic/kspclib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/harmonic/derivative_dynmat.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/harmonic/derivative_dynmat.o cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/harmonic_h -Ic/kspclib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/kspclib/kgrid.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/kspclib/kgrid.o cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/harmonic_h -Ic/kspclib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/kspclib/tetrahedron_method.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/kspclib/tetrahedron_method.o cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/_phonopy.o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/harmonic/dynmat.o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/harmonic/derivative_dynmat.o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/kspclib/kgrid.o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/kspclib/tetrahedron_method.o -L/usr/local/lib -lpython3.6m -o build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/_phonopy.so building 'phonopy._spglib' extension creating build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/_spglib.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/_spglib.o In file included from /usr/local/lib/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/local/lib/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from c/_spglib.c:37: /usr/local/lib/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/spglib/arithmetic.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/arithmetic.o cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/spglib/cell.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/cell.o cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/spglib/delaunay.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/delaunay.o cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/spglib/determination.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/determination.o cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/spglib/hall_symbol.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/hall_symbol.o cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/spglib/kgrid.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/kgrid.o cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/spglib/kpoint.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/kpoint.o cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/spglib/mathfunc.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/mathfunc.o cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/spglib/niggli.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/niggli.o cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/spglib/overlap.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/overlap.o cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/spglib/pointgroup.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/pointgroup.o cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/spglib/primitive.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/primitive.o cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/spglib/refinement.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/refinement.o cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/spglib/sitesym_database.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/sitesym_database.o cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/spglib/site_symmetry.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/site_symmetry.o cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/spglib/spacegroup.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/spacegroup.o cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/spglib/spg_database.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/spg_database.o cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/spglib/spglib.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/spglib.o cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/spglib/spin.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/spin.o cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c c/spglib/symmetry.c -o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/symmetry.o cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/_spglib.o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/arithmetic.o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/cell.o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/delaunay.o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/determination.o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/hall_symbol.o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/kgrid.o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/kpoint.o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/mathfunc.o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/niggli.o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/overlap.o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/pointgroup.o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/primitive.o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/refinement.o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/sitesym_database.o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/site_symmetry.o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/spacegroup.o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/spg_database.o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/spglib.o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/spin.o build/temp.dragonfly-5.5-SYNTH-x86_64-3.6/c/spglib/symmetry.o -L/usr/local/lib -lpython3.6m -o build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/_spglib.so running build_scripts creating build/scripts-3.6 copying and adjusting scripts/phonopy -> build/scripts-3.6 copying and adjusting scripts/phonopy-qha -> build/scripts-3.6 copying and adjusting scripts/phonopy-FHI-aims -> build/scripts-3.6 copying and adjusting scripts/phonopy-bandplot -> build/scripts-3.6 copying and adjusting scripts/phonopy-vasp-born -> build/scripts-3.6 copying and adjusting scripts/phonopy-vasp-efe -> build/scripts-3.6 copying and adjusting scripts/phonopy-crystal-born -> build/scripts-3.6 copying and adjusting scripts/phonopy-propplot -> build/scripts-3.6 copying and adjusting scripts/phonopy-tdplot -> build/scripts-3.6 copying and adjusting scripts/phonopy-dispmanager -> build/scripts-3.6 copying and adjusting scripts/phonopy-gruneisen -> build/scripts-3.6 copying and adjusting scripts/phonopy-gruneisenplot -> build/scripts-3.6 copying and adjusting scripts/phonopy-pdosplot -> build/scripts-3.6 changing mode of build/scripts-3.6/phonopy from 644 to 755 changing mode of build/scripts-3.6/phonopy-qha from 644 to 755 changing mode of build/scripts-3.6/phonopy-FHI-aims from 644 to 755 changing mode of build/scripts-3.6/phonopy-bandplot from 644 to 755 changing mode of build/scripts-3.6/phonopy-vasp-born from 644 to 755 changing mode of build/scripts-3.6/phonopy-vasp-efe from 644 to 755 changing mode of build/scripts-3.6/phonopy-crystal-born from 644 to 755 changing mode of build/scripts-3.6/phonopy-propplot from 644 to 755 changing mode of build/scripts-3.6/phonopy-tdplot from 644 to 755 changing mode of build/scripts-3.6/phonopy-dispmanager from 644 to 755 changing mode of build/scripts-3.6/phonopy-gruneisen from 644 to 755 changing mode of build/scripts-3.6/phonopy-gruneisenplot from 644 to 755 changing mode of build/scripts-3.6/phonopy-pdosplot from 644 to 755 -------------------------------------------------------------------------------- -- Phase: run-depends -------------------------------------------------------------------------------- ===> py36-phonopy-1.13.2.107_1 depends on package: py36-numpy>0 - found ===> py36-phonopy-1.13.2.107_1 depends on package: py36-h5py>0 - found ===> py36-phonopy-1.13.2.107_1 depends on package: py36-matplotlib>0 - found ===> py36-phonopy-1.13.2.107_1 depends on package: py36-yaml>0 - found ===> py36-phonopy-1.13.2.107_1 depends on package: py36-setuptools>0 - found ===> py36-phonopy-1.13.2.107_1 depends on file: /usr/local/bin/python3.6 - found -------------------------------------------------------------------------------- -- Phase: stage -------------------------------------------------------------------------------- ===> Staging for py36-phonopy-1.13.2.107_1 ===> Generating temporary packing list setuptools is used. running install running build running build_py running build_ext running build_scripts running install_lib creating /construction/science/py-phonopy/stage/usr/local/lib/python3.6 creating /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages creating /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/_spglib.so -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/_phonopy.so -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy creating /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/spectrum copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/spectrum/__init__.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/spectrum copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/spectrum/velocity.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/spectrum copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/spectrum/dynamic_structure_factor.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/spectrum creating /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon/modulation.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon/qpoints.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon/animation.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon/mesh.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon/__init__.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon/irreps.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon/group_velocity.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon/moment.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon/dos.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon/thermal_displacement.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon/thermal_properties.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon/tetrahedron_mesh.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon/degeneracy.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/phonon/band_structure.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon creating /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/harmonic copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/harmonic/force_constants.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/harmonic copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/harmonic/displacement.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/harmonic copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/harmonic/derivative_dynmat.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/harmonic copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/harmonic/__init__.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/harmonic copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/harmonic/dynmat_to_fc.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/harmonic copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/harmonic/dynamical_matrix.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/harmonic copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/harmonic/forces.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/harmonic creating /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/qha copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/qha/eos.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/qha copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/qha/electron.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/qha copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/qha/core.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/qha copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/qha/__init__.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/qha creating /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/structure copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/structure/symmetry.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/structure copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/structure/spglib.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/structure copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/structure/grid_points.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/structure copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/structure/cells.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/structure copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/structure/brillouin_zone.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/structure copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/structure/atoms.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/structure copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/structure/__init__.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/structure copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/structure/tetrahedron_method.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/structure creating /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/gruneisen copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/gruneisen/core.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/gruneisen copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/gruneisen/band_structure.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/gruneisen copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/gruneisen/__init__.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/gruneisen copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/gruneisen/thermal_properties.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/gruneisen copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/gruneisen/mesh.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/gruneisen creating /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/interface copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/interface/phonopy_yaml.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/interface copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/interface/wien2k.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/interface copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/interface/vasp.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/interface copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/interface/siesta.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/interface copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/interface/elk.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/interface copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/interface/crystal.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/interface copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/interface/cp2k.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/interface copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/interface/cif.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/interface copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/interface/abinit.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/interface copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/interface/__init__.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/interface copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/interface/FHIaims.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/interface copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/interface/qe.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/interface copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/version.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/units.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/api_phonopy.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/file_IO.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/api_gruneisen.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy creating /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/cui copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/cui/show_symmetry.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/cui copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/cui/settings.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/cui copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/cui/phonopy_argparse.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/cui copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/cui/load.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/cui copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/cui/__init__.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/cui copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/__init__.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/api_qha.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy creating /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/unfolding copying build/lib.dragonfly-5.5-SYNTH-x86_64-3.6/phonopy/unfolding/__init__.py -> /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/unfolding byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/spectrum/__init__.py to __init__.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/spectrum/velocity.py to velocity.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/spectrum/dynamic_structure_factor.py to dynamic_structure_factor.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon/modulation.py to modulation.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon/qpoints.py to qpoints.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon/animation.py to animation.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon/mesh.py to mesh.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon/__init__.py to __init__.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon/irreps.py to irreps.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon/group_velocity.py to group_velocity.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon/moment.py to moment.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon/dos.py to dos.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon/thermal_displacement.py to thermal_displacement.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon/thermal_properties.py to thermal_properties.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon/tetrahedron_mesh.py to tetrahedron_mesh.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon/degeneracy.py to degeneracy.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/phonon/band_structure.py to band_structure.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/harmonic/force_constants.py to force_constants.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/harmonic/displacement.py to displacement.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/harmonic/derivative_dynmat.py to derivative_dynmat.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/harmonic/__init__.py to __init__.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/harmonic/dynmat_to_fc.py to dynmat_to_fc.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/harmonic/dynamical_matrix.py to dynamical_matrix.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/harmonic/forces.py to forces.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/qha/eos.py to eos.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/qha/electron.py to electron.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/qha/core.py to core.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/qha/__init__.py to __init__.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/structure/symmetry.py to symmetry.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/structure/spglib.py to spglib.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/structure/grid_points.py to grid_points.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/structure/cells.py to cells.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/structure/brillouin_zone.py to brillouin_zone.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/structure/atoms.py to atoms.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/structure/__init__.py to __init__.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/structure/tetrahedron_method.py to tetrahedron_method.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/gruneisen/core.py to core.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/gruneisen/band_structure.py to band_structure.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/gruneisen/__init__.py to __init__.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/gruneisen/thermal_properties.py to thermal_properties.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/gruneisen/mesh.py to mesh.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/interface/phonopy_yaml.py to phonopy_yaml.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/interface/wien2k.py to wien2k.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/interface/vasp.py to vasp.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/interface/siesta.py to siesta.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/interface/elk.py to elk.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/interface/crystal.py to crystal.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/interface/cp2k.py to cp2k.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/interface/cif.py to cif.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/interface/abinit.py to abinit.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/interface/__init__.py to __init__.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/interface/FHIaims.py to FHIaims.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/interface/qe.py to qe.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/version.py to version.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/units.py to units.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/api_phonopy.py to api_phonopy.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/file_IO.py to file_IO.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/api_gruneisen.py to api_gruneisen.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/cui/show_symmetry.py to show_symmetry.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/cui/settings.py to settings.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/cui/phonopy_argparse.py to phonopy_argparse.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/cui/load.py to load.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/cui/__init__.py to __init__.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/__init__.py to __init__.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/api_qha.py to api_qha.cpython-36.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy/unfolding/__init__.py to __init__.cpython-36.pyc writing byte-compilation script '/tmp/tmp91wmd4e8.py' /usr/local/bin/python3.6 /tmp/tmp91wmd4e8.py removing /tmp/tmp91wmd4e8.py running install_egg_info running egg_info writing phonopy.egg-info/PKG-INFO writing dependency_links to phonopy.egg-info/dependency_links.txt writing requirements to phonopy.egg-info/requires.txt writing top-level names to phonopy.egg-info/top_level.txt reading manifest file 'phonopy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*.pyc' found under directory 'test' writing manifest file 'phonopy.egg-info/SOURCES.txt' Copying phonopy.egg-info to /construction/science/py-phonopy/stage/usr/local/lib/python3.6/site-packages/phonopy-1.13.2.107-py3.6.egg-info running install_scripts copying build/scripts-3.6/phonopy-qha -> /construction/science/py-phonopy/stage/usr/local/bin copying build/scripts-3.6/phonopy-propplot -> /construction/science/py-phonopy/stage/usr/local/bin copying build/scripts-3.6/phonopy -> /construction/science/py-phonopy/stage/usr/local/bin copying build/scripts-3.6/phonopy-crystal-born -> /construction/science/py-phonopy/stage/usr/local/bin copying build/scripts-3.6/phonopy-vasp-efe -> /construction/science/py-phonopy/stage/usr/local/bin copying build/scripts-3.6/phonopy-dispmanager -> /construction/science/py-phonopy/stage/usr/local/bin copying build/scripts-3.6/phonopy-gruneisenplot -> /construction/science/py-phonopy/stage/usr/local/bin copying build/scripts-3.6/phonopy-gruneisen -> /construction/science/py-phonopy/stage/usr/local/bin copying build/scripts-3.6/phonopy-vasp-born -> /construction/science/py-phonopy/stage/usr/local/bin copying build/scripts-3.6/phonopy-pdosplot -> /construction/science/py-phonopy/stage/usr/local/bin copying build/scripts-3.6/phonopy-bandplot -> /construction/science/py-phonopy/stage/usr/local/bin copying build/scripts-3.6/phonopy-tdplot -> /construction/science/py-phonopy/stage/usr/local/bin copying build/scripts-3.6/phonopy-FHI-aims -> /construction/science/py-phonopy/stage/usr/local/bin changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy-qha to 755 changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy-propplot to 755 changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy to 755 changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy-crystal-born to 755 changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy-vasp-efe to 755 changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy-dispmanager to 755 changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy-gruneisenplot to 755 changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy-gruneisen to 755 changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy-vasp-born to 755 changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy-pdosplot to 755 changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy-bandplot to 755 changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy-tdplot to 755 changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy-FHI-aims to 755 writing list of installed files to '/construction/science/py-phonopy/.PLIST.pymodtmp' ====> Compressing man pages (compress-man) -------------------------------------------------------------------------------- -- Phase: package -------------------------------------------------------------------------------- ===> Building package for py36-phonopy-1.13.2.107_1 file sizes/checksums [221]: ... done packing files [221]: ... done packing directories [0]: . done -------------------------------------------------- -- Termination -------------------------------------------------- Finished: Thursday, 7 MAR 2019 at 13:02:47 UTC Duration: 00:00:46