=> Building math/nauty Started : Friday, 8 MAR 2019 at 19:22:57 UTC Platform: 5.5-DEVELOPMENT DragonFly v5.5.0.192.g15ae7f0-DEVELOPMENT #34: Tue Feb 19 09:07:07 PST 2019 root@pkgbox64.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 -------------------------------------------------- -- Environment -------------------------------------------------- UNAME_r=5.5-SYNTH UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=DragonFly 5.5-SYNTH UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 TERM=dumb PKG_CACHEDIR=/var/cache/pkg8 PKG_DBDIR=/var/db/pkg8 PORTSDIR=/xports LANG=C HOME=/root USER=root -------------------------------------------------- -- Options -------------------------------------------------- ===> The following configuration options are available for nauty-2.4r2: DOCS=on: Build and/or install documentation ===> Use 'make config' to modify these settings -------------------------------------------------- -- CONFIGURE_ENV -------------------------------------------------- MAKE=gmake XDG_DATA_HOME=/construction/math/nauty XDG_CONFIG_HOME=/construction/math/nauty HOME=/construction/math/nauty TMPDIR="/tmp" PATH=/construction/math/nauty/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc80 CONFIG_SITE=/xports/Templates/config.site lt_cv_sys_max_cmd_len=262144 -------------------------------------------------- -- CONFIGURE_ARGS -------------------------------------------------- --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} -------------------------------------------------- -- MAKE_ENV -------------------------------------------------- XDG_DATA_HOME=/construction/math/nauty XDG_CONFIG_HOME=/construction/math/nauty HOME=/construction/math/nauty TMPDIR="/tmp" PATH=/construction/math/nauty/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc80 PREFIX=/usr/local LOCALBASE=/usr/local NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" " LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" -------------------------------------------------- -- MAKE_ARGS -------------------------------------------------- DESTDIR=/construction/math/nauty/stage -------------------------------------------------- -- PLIST_SUB -------------------------------------------------- PORTDOCS="" OSREL=5.5 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/nauty" EXAMPLESDIR="share/examples/nauty" DATADIR="share/nauty" WWWDIR="www/nauty" ETCDIR="etc/nauty" -------------------------------------------------- -- SUB_LIST -------------------------------------------------- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/nauty DOCSDIR=/usr/local/share/doc/nauty EXAMPLESDIR=/usr/local/share/examples/nauty WWWDIR=/usr/local/www/nauty ETCDIR=/usr/local/etc/nauty -------------------------------------------------- -- /etc/make.conf -------------------------------------------------- SYNTHPROFILE=Release-BE USE_PACKAGE_DEPENDS_ONLY=yes PACKAGE_BUILDING=yes BATCH=yes PKG_CREATE_VERBOSE=yes PORTSDIR=/xports DISTDIR=/distfiles WRKDIRPREFIX=/construction PORT_DBDIR=/options PACKAGES=/packages MAKE_JOBS_NUMBER_LIMIT=5 LICENSES_ACCEPTED= NONE HAVE_COMPAT_IA32_KERN= CONFIGURE_MAX_CMD_LEN=262144 _PERL5_FROM_BIN=5.26.2 _ALTCCVERSION_921dbbb2=none _OBJC_ALTCCVERSION_921dbbb2=none _SMP_CPUS=8 UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=500500 OSVERSION=9999999 OSREL=5.5 _OSRELEASE=5.5-SYNTH PYTHONBASE=/usr/local _PKG_CHECKED=1 -------------------------------------------------------------------------------- -- Phase: check-sanity -------------------------------------------------------------------------------- ===> NOTICE: The nauty port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License NAUTY accepted by the user -------------------------------------------------------------------------------- -- Phase: pkg-depends -------------------------------------------------------------------------------- ===> nauty-2.4r2 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.10.5_5.txz Installing pkg-1.10.5_5... Extracting pkg-1.10.5_5: .......... done ===> nauty-2.4r2 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of nauty-2.4r2 -------------------------------------------------------------------------------- -- Phase: fetch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: fetch -------------------------------------------------------------------------------- ===> NOTICE: The nauty port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License NAUTY accepted by the user ===> Fetching all distfiles required by nauty-2.4r2 for building -------------------------------------------------------------------------------- -- Phase: checksum -------------------------------------------------------------------------------- ===> NOTICE: The nauty port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License NAUTY accepted by the user ===> Fetching all distfiles required by nauty-2.4r2 for building => SHA256 Checksum OK for nauty24r2.tar.gz. -------------------------------------------------------------------------------- -- Phase: extract-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: extract -------------------------------------------------------------------------------- ===> NOTICE: The nauty port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License NAUTY accepted by the user ===> Fetching all distfiles required by nauty-2.4r2 for building ===> Extracting for nauty-2.4r2 => SHA256 Checksum OK for nauty24r2.tar.gz. -------------------------------------------------------------------------------- -- Phase: patch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: patch -------------------------------------------------------------------------------- ===> Patching for nauty-2.4r2 -------------------------------------------------------------------------------- -- Phase: build-depends -------------------------------------------------------------------------------- ===> nauty-2.4r2 depends on executable: gmake - not found ===> Installing existing package /packages/All/gmake-4.2.1_3.txz Installing gmake-4.2.1_3... `-- Installing gettext-runtime-0.19.8.1_2... | `-- Installing indexinfo-0.3.1... | `-- Extracting indexinfo-0.3.1: .... done `-- Extracting gettext-runtime-0.19.8.1_2: .......... done Extracting gmake-4.2.1_3: .......... done ===> nauty-2.4r2 depends on executable: gmake - found ===> Returning to build of nauty-2.4r2 -------------------------------------------------------------------------------- -- Phase: lib-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: configure -------------------------------------------------------------------------------- ===> Configuring for nauty-2.4r2 configure: loading site script /xports/Templates/config.site checking build system type... x86_64-portbld-dragonfly5.5 checking host system type... x86_64-portbld-dragonfly5.5 checking for gcc... cc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ISO C89... none needed CFLAGS=-pipe -O2 -fno-strict-aliasing MORECFLAGS= checking for sys/wait.h that is POSIX.1 compatible... (cached) yes checking how to run the C preprocessor... cpp checking for grep that handles long lines and -e... (cached) /usr/bin/grep checking for egrep... (cached) /usr/bin/egrep checking for ANSI C header files... (cached) yes checking for sys/types.h... (cached) yes checking for sys/stat.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for memory.h... (cached) yes checking for strings.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for unistd.h... (cached) yes checking for stddef.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/types.h... (cached) yes checking for sys/wait.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for errno.h... (cached) yes checking for pid_t... (cached) yes checking if malloc is declared in stdlib.h or malloc.h... 1 checking if ftell is declared in stdio.h... 1 checking if fdopen is declared in stdio.h... 1 checking if popen is declared in stdio.h... 1 checking if putenv is declared in stdlib.h... 1 checking if setenv is declared in stdlib.h... 1 checking if INFINITY is declared in math.h... 1 checking for int... (cached) yes checking size of int... 4 checking for long... (cached) yes checking size of long... 8 checking for long long... (cached) yes checking size of long long... 8 checking for an ANSI C-conforming const... yes checking for isatty... yes checking for times... (cached) yes checking for time... (cached) yes checking for gettimeofday... (cached) yes checking for times... (cached) yes checking for getrusage... (cached) yes checking for perror... yes checking for pipe... (cached) yes checking for wait... yes checking for popen... yes checking for putenv... (cached) yes checking for setenv... (cached) yes checking for getc_unlocked... yes checking for flockfile... yes checking for gsort... no checking for sort... sort checking if sort supports the -k switch... 1 configure: creating ./config.status config.status: creating makefile config.status: creating nauty.h config.status: creating naututil.h config.status: creating gtools.h -------------------------------------------------------------------------------- -- Phase: build -------------------------------------------------------------------------------- ===> Building for nauty-2.4r2 gmake[1]: Entering directory '/construction/math/nauty/nauty24r2' cc -c -pipe -O2 -fno-strict-aliasing naututil.c cc -c -pipe -O2 -fno-strict-aliasing nauty.c cc -c -pipe -O2 -fno-strict-aliasing nautil.c cc -c -pipe -O2 -fno-strict-aliasing nautinv.c cc -c -pipe -O2 -fno-strict-aliasing naugraph.c cc -c -pipe -O2 -fno-strict-aliasing rng.c cc -c -pipe -O2 -fno-strict-aliasing gtools.c cc -c -pipe -O2 -fno-strict-aliasing gtnauty.c cc -c -pipe -O2 -fno-strict-aliasing nausparse.c cc -c -pipe -O2 -fno-strict-aliasing gutil2.c cc -c -pipe -O2 -fno-strict-aliasing -DMAXN=WORDSIZE -o nauty1.o nauty.c cc -c -pipe -O2 -fno-strict-aliasing -DMAXN=WORDSIZE -o nautil1.o nautil.c cc -c -pipe -O2 -fno-strict-aliasing -DMAXN=WORDSIZE -o naugraph1.o naugraph.c cc -o showg -pipe -O2 -fno-strict-aliasing showg.c cc -c -pipe -O2 -fno-strict-aliasing gutil1.c cc -c -pipe -O2 -fno-strict-aliasing -DMAXN=WORDSIZE -DWORDSIZE=32 -o gtoolsW1.o gtools.c cc -c -pipe -O2 -fno-strict-aliasing -DMAXN=WORDSIZE -DWORDSIZE=32 -o nautyW1.o nauty.c cc -c -pipe -O2 -fno-strict-aliasing -DMAXN=WORDSIZE -DWORDSIZE=32 -o nautilW1.o nautil.c cc -c -pipe -O2 -fno-strict-aliasing -DMAXN=WORDSIZE -DWORDSIZE=32 -o naugraphW1.o naugraph.c cc -c -pipe -O2 -fno-strict-aliasing naugroup.c cc -o planarg -pipe -O2 -fno-strict-aliasing \ planarg.c planarity.c gtools.o planarg.c:169:1: warning: return type defaults to 'int' [-Wimplicit-int] main(int argc, char *argv[]) ^~~~ cc -o gentourng -pipe -O2 -fno-strict-aliasing -DMAXN=24 gentourng.c gtools.o nauty1.o \ nautil1.o naugraph1.o cc -o dreadnaut -pipe -O2 -fno-strict-aliasing dreadnaut.c \ naututil.o nauty.o nautil.o nautinv.o naugraph.o rng.o planarity.c:6975:8: warning: type defaults to 'int' in declaration of 'embedg_init_insert_TE' [-Wimplicit-int] static embedg_init_insert_TE (t_ver_edge *, int, int *, t_dlcl *); ^~~~~~~~~~~~~~~~~~~~~ planarity.c:7287:1: warning: return type defaults to 'int' [-Wimplicit-int] embedg_init_insert_TE (t_ver_edge *embed_graph, int n, int *edge_pos, t_dlcl *p) ^~~~~~~~~~~~~~~~~~~~~ cc -o copyg -pipe -O2 -fno-strict-aliasing copyg.c gtools.o copyg.c:30:1: warning: return type defaults to 'int' [-Wimplicit-int] main(int argc, char *argv[]) ^~~~ cc -o listg -pipe -O2 -fno-strict-aliasing listg.c gtools.o nautil.o cc -o labelg -pipe -O2 -fno-strict-aliasing labelg.c gtools.o gtnauty.o \ nauty.o nautil.o naugraph.o nautinv.o nausparse.o \ gutil2.o cc -o dretog -pipe -O2 -fno-strict-aliasing dretog.c \ gtools.o naututil.o nautil.o rng.o naugraph.o cc -o amtog -pipe -O2 -fno-strict-aliasing amtog.c gtools.o cc -o geng -pipe -O2 -fno-strict-aliasing -DMAXN=32 geng.c gtools.o nauty1.o \ nautil1.o naugraph1.o cc -o complg -pipe -O2 -fno-strict-aliasing complg.c gtools.o gtnauty.o \ nauty.o nautil.o naugraph.o nausparse.o cc -o shortg -pipe -O2 -fno-strict-aliasing shortg.c gtools.o gtnauty.o nautinv.o \ nauty.o nautil.o naugraph.o nausparse.o gutil2.o cc -o NRswitchg -pipe -O2 -fno-strict-aliasing NRswitchg.c gtools.o gtnauty.o \ nauty.o nautil.o naugraph.o nausparse.o shortg.c: In function 'main': shortg.c:440:14: warning: implicit declaration of function 'loopcount'; did you mean 'edgecount'? [-Wimplicit-function-declaration] loops = loopcount(g,m,n); ^~~~~~~~~ edgecount shortg.c:641:16: warning: implicit declaration of function 'wait'; did you mean 'main'? [-Wimplicit-function-declaration] while (wait(&status) != sortpid) {} ^~~~ main cc -o biplabg -pipe -O2 -fno-strict-aliasing biplabg.c \ gtools.o nautil.o naugraph.o gutil1.o biplabg.c: In function 'biplabel': biplabg.c:37:7: warning: implicit declaration of function 'twocolouring' [-Wimplicit-function-declaration] if (!twocolouring(g,colour,m,n)) return FALSE; ^~~~~~~~~~~~ cc -o addedgeg -pipe -O2 -fno-strict-aliasing addedgeg.c gtools.o gtnauty.o \ nauty.o nautil.o naugraph.o gutil1.o nausparse.o cc -o deledgeg -pipe -O2 -fno-strict-aliasing deledgeg.c gtools.o gtnauty.o \ nauty.o nautil.o naugraph.o nausparse.o cc -o countg -pipe -O2 -fno-strict-aliasing testg.c gtools.o gtnauty.o gutil1.o \ gutil2.o nauty.o nautil.o naugraph.o nausparse.o cc -o pickg -pipe -O2 -fno-strict-aliasing testg.c gtools.o gtnauty.o gutil1.o \ gutil2.o nauty.o nautil.o naugraph.o nausparse.o cc -o genrang -pipe -O2 -fno-strict-aliasing genrang.c nausparse.o \ gtools.o nautil.o naututil.o naugraph.o rng.o cc -o newedgeg -pipe -O2 -fno-strict-aliasing newedgeg.c gtools.o gtnauty.o \ nauty.o nautil.o naugraph.o nausparse.o cc -o catg -pipe -O2 -fno-strict-aliasing catg.c gtools.o cc -o genbg -pipe -O2 -fno-strict-aliasing -DMAXN=WORDSIZE -DWORDSIZE=32 genbg.c gtoolsW1.o \ nautyW1.o nautilW1.o naugraphW1.o genbg.c:1368:1: warning: return type defaults to 'int' [-Wimplicit-int] main(int argc, char *argv[]) ^~~~ cc -o directg -pipe -O2 -fno-strict-aliasing directg.c gtools.o \ nauty.o nautil.o naugraph.o naugroup.o directg.c:440:1: warning: return type defaults to 'int' [-Wimplicit-int] main(int argc, char *argv[]) ^~~~ cc -o multig -pipe -O2 -fno-strict-aliasing multig.c gtools.o \ nauty.o nautil.o naugraph.o naugroup.o gmake[1]: Leaving directory '/construction/math/nauty/nauty24r2' -------------------------------------------------------------------------------- -- Phase: run-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: stage -------------------------------------------------------------------------------- ===> Staging for nauty-2.4r2 ===> Generating temporary packing list install -s -m 555 /construction/math/nauty/nauty24r2/NRswitchg /construction/math/nauty/stage/usr/local/bin install -s -m 555 /construction/math/nauty/nauty24r2/addedgeg /construction/math/nauty/stage/usr/local/bin install -s -m 555 /construction/math/nauty/nauty24r2/amtog /construction/math/nauty/stage/usr/local/bin install -s -m 555 /construction/math/nauty/nauty24r2/biplabg /construction/math/nauty/stage/usr/local/bin install -s -m 555 /construction/math/nauty/nauty24r2/catg /construction/math/nauty/stage/usr/local/bin install -s -m 555 /construction/math/nauty/nauty24r2/complg /construction/math/nauty/stage/usr/local/bin install -s -m 555 /construction/math/nauty/nauty24r2/copyg /construction/math/nauty/stage/usr/local/bin install -s -m 555 /construction/math/nauty/nauty24r2/countg /construction/math/nauty/stage/usr/local/bin install -s -m 555 /construction/math/nauty/nauty24r2/deledgeg /construction/math/nauty/stage/usr/local/bin install -s -m 555 /construction/math/nauty/nauty24r2/directg /construction/math/nauty/stage/usr/local/bin install -s -m 555 /construction/math/nauty/nauty24r2/dreadnaut /construction/math/nauty/stage/usr/local/bin install -s -m 555 /construction/math/nauty/nauty24r2/dretog /construction/math/nauty/stage/usr/local/bin install -s -m 555 /construction/math/nauty/nauty24r2/genbg /construction/math/nauty/stage/usr/local/bin install -s -m 555 /construction/math/nauty/nauty24r2/geng /construction/math/nauty/stage/usr/local/bin install -s -m 555 /construction/math/nauty/nauty24r2/genrang /construction/math/nauty/stage/usr/local/bin install -s -m 555 /construction/math/nauty/nauty24r2/gentourng /construction/math/nauty/stage/usr/local/bin install -s -m 555 /construction/math/nauty/nauty24r2/labelg /construction/math/nauty/stage/usr/local/bin install -s -m 555 /construction/math/nauty/nauty24r2/listg /construction/math/nauty/stage/usr/local/bin install -s -m 555 /construction/math/nauty/nauty24r2/multig /construction/math/nauty/stage/usr/local/bin install -s -m 555 /construction/math/nauty/nauty24r2/newedgeg /construction/math/nauty/stage/usr/local/bin install -s -m 555 /construction/math/nauty/nauty24r2/pickg /construction/math/nauty/stage/usr/local/bin install -s -m 555 /construction/math/nauty/nauty24r2/planarg /construction/math/nauty/stage/usr/local/bin install -s -m 555 /construction/math/nauty/nauty24r2/shortg /construction/math/nauty/stage/usr/local/bin install -s -m 555 /construction/math/nauty/nauty24r2/showg /construction/math/nauty/stage/usr/local/bin install -m 0644 /construction/math/nauty/nauty24r2/nug.pdf /construction/math/nauty/stage/usr/local/share/doc/nauty ====> Compressing man pages (compress-man) -------------------------------------------------------------------------------- -- Phase: package -------------------------------------------------------------------------------- ===> Building package for nauty-2.4r2 file sizes/checksums [28]: . done packing files [28]: . done packing directories [0]: . done -------------------------------------------------- -- Termination -------------------------------------------------- Finished: Friday, 8 MAR 2019 at 19:23:18 UTC Duration: 00:00:20