=> Building biology/graphlan Started : Thursday, 7 MAR 2019 at 18:15:33 UTC Platform: 5.5-DEVELOPMENT DragonFly v5.5.0.192.g15ae7f0-DEVELOPMENT #34: Tue Feb 19 09:07:07 PST 2019 root@pkgbox64.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 -------------------------------------------------- -- Environment -------------------------------------------------- UNAME_r=5.5-SYNTH UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=DragonFly 5.5-SYNTH UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 TERM=dumb PKG_CACHEDIR=/var/cache/pkg8 PKG_DBDIR=/var/db/pkg8 PORTSDIR=/xports LANG=C HOME=/root USER=root -------------------------------------------------- -- Options -------------------------------------------------- -------------------------------------------------- -- CONFIGURE_ENV -------------------------------------------------- PYTHON="/usr/local/bin/python2.7" XDG_DATA_HOME=/construction/biology/graphlan XDG_CONFIG_HOME=/construction/biology/graphlan HOME=/construction/biology/graphlan TMPDIR="/tmp" PATH=/construction/biology/graphlan/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc80 -------------------------------------------------- -- CONFIGURE_ARGS -------------------------------------------------- -------------------------------------------------- -- MAKE_ENV -------------------------------------------------- XDG_DATA_HOME=/construction/biology/graphlan XDG_CONFIG_HOME=/construction/biology/graphlan HOME=/construction/biology/graphlan TMPDIR="/tmp" PATH=/construction/biology/graphlan/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc80 PREFIX=/usr/local LOCALBASE=/usr/local NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" " LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" -------------------------------------------------- -- MAKE_ARGS -------------------------------------------------- DESTDIR=/construction/biology/graphlan/stage -------------------------------------------------- -- PLIST_SUB -------------------------------------------------- PYTHON_INCLUDEDIR=include/python2.7 PYTHON_LIBDIR=lib/python2.7 PYTHON_PLATFORM=dragonfly5 PYTHON_PYOEXTENSION=pyo PYTHON_SITELIBDIR=lib/python2.7/site-packages PYTHON_SUFFIX=27 PYTHON_VER=2.7 PYTHON_VERSION=python2.7 PYTHON2="" PYTHON3="@comment " OSREL=5.5 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/graphlan" EXAMPLESDIR="share/examples/graphlan" DATADIR="share/graphlan" WWWDIR="www/graphlan" ETCDIR="etc/graphlan" -------------------------------------------------- -- SUB_LIST -------------------------------------------------- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/graphlan DOCSDIR=/usr/local/share/doc/graphlan EXAMPLESDIR=/usr/local/share/examples/graphlan WWWDIR=/usr/local/www/graphlan ETCDIR=/usr/local/etc/graphlan -------------------------------------------------- -- /etc/make.conf -------------------------------------------------- SYNTHPROFILE=Release-BE USE_PACKAGE_DEPENDS_ONLY=yes PACKAGE_BUILDING=yes BATCH=yes PKG_CREATE_VERBOSE=yes PORTSDIR=/xports DISTDIR=/distfiles WRKDIRPREFIX=/construction PORT_DBDIR=/options PACKAGES=/packages MAKE_JOBS_NUMBER_LIMIT=5 LICENSES_ACCEPTED= NONE HAVE_COMPAT_IA32_KERN= CONFIGURE_MAX_CMD_LEN=262144 _PERL5_FROM_BIN=5.26.2 _ALTCCVERSION_921dbbb2=none _OBJC_ALTCCVERSION_921dbbb2=none _SMP_CPUS=8 UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=500500 OSVERSION=9999999 OSREL=5.5 _OSRELEASE=5.5-SYNTH PYTHONBASE=/usr/local _PKG_CHECKED=1 -------------------------------------------------------------------------------- -- Phase: check-sanity -------------------------------------------------------------------------------- ===> License MIT accepted by the user -------------------------------------------------------------------------------- -- Phase: pkg-depends -------------------------------------------------------------------------------- ===> graphlan-1.1.3 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.10.5_5.txz Installing pkg-1.10.5_5... Extracting pkg-1.10.5_5: .......... done ===> graphlan-1.1.3 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of graphlan-1.1.3 -------------------------------------------------------------------------------- -- Phase: fetch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: fetch -------------------------------------------------------------------------------- ===> License MIT accepted by the user => graphlan-v1.1.3-66ec7cfce81e.tar.gz doesn't seem to exist in /distfiles/. => Attempting to fetch https://bitbucket.org/nsegata/graphlan/get/66ec7cfce81e.tar.gz?dummy=/graphlan-v1.1.3-66ec7cfce81e.tar.gz graphlan-v1.1.3-66ec7cfce81e.tar.gz 2547 kB 0 Bps => pyphlan-eae40ebc0030.tar.gz doesn't seem to exist in /distfiles/. => Attempting to fetch https://bitbucket.org/nsegata/pyphlan/get/eae40ebc0030.tar.gz?dummy=/pyphlan-eae40ebc0030.tar.gz pyphlan-eae40ebc0030.tar.gz 26 kB 0 Bps => export2graphlan-c168a100f37e.tar.gz doesn't seem to exist in /distfiles/. => Attempting to fetch https://bitbucket.org/CibioCM/export2graphlan/get/c168a100f37e.tar.gz?dummy=/export2graphlan-c168a100f37e.tar.gz export2graphlan-c168a100f37e.tar.gz 536 kB 0 Bps ===> Fetching all distfiles required by graphlan-1.1.3 for building -------------------------------------------------------------------------------- -- Phase: checksum -------------------------------------------------------------------------------- ===> License MIT accepted by the user ===> Fetching all distfiles required by graphlan-1.1.3 for building => SHA256 Checksum OK for graphlan-v1.1.3-66ec7cfce81e.tar.gz. => SHA256 Checksum OK for pyphlan-eae40ebc0030.tar.gz. => SHA256 Checksum OK for export2graphlan-c168a100f37e.tar.gz. -------------------------------------------------------------------------------- -- Phase: extract-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: extract -------------------------------------------------------------------------------- ===> License MIT accepted by the user ===> Fetching all distfiles required by graphlan-1.1.3 for building ===> Extracting for graphlan-1.1.3 => SHA256 Checksum OK for graphlan-v1.1.3-66ec7cfce81e.tar.gz. => SHA256 Checksum OK for pyphlan-eae40ebc0030.tar.gz. => SHA256 Checksum OK for export2graphlan-c168a100f37e.tar.gz. -------------------------------------------------------------------------------- -- Phase: patch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: patch -------------------------------------------------------------------------------- ===> Patching for graphlan-1.1.3 -------------------------------------------------------------------------------- -- Phase: build-depends -------------------------------------------------------------------------------- ===> graphlan-1.1.3 depends on file: /usr/local/bin/python2.7 - not found ===> Installing existing package /packages/All/python27-2.7.15.txz Installing python27-2.7.15... `-- Installing expat-2.2.6_1... `-- Extracting expat-2.2.6_1: .......... done `-- Installing gettext-runtime-0.19.8.1_2... | `-- Installing indexinfo-0.3.1... | `-- Extracting indexinfo-0.3.1: .... done `-- Extracting gettext-runtime-0.19.8.1_2: .......... done `-- Installing libffi-3.2.1_3... `-- Extracting libffi-3.2.1_3: .......... done `-- Installing libressl-2.8.3... `-- Extracting libressl-2.8.3: .......... done `-- Installing ncurses-6.1.20190112... `-- Extracting ncurses-6.1.20190112: .......... done `-- Installing readline-7.0.5... `-- Extracting readline-7.0.5: .......... done Extracting python27-2.7.15: .......... done Message from python27-2.7.15: =========================================================================== Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: bsddb databases/py-bsddb gdbm databases/py-gdbm sqlite3 databases/py-sqlite3 tkinter x11-toolkits/py-tkinter =========================================================================== ===> graphlan-1.1.3 depends on file: /usr/local/bin/python2.7 - found ===> Returning to build of graphlan-1.1.3 -------------------------------------------------------------------------------- -- Phase: lib-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: configure -------------------------------------------------------------------------------- ===> Configuring for graphlan-1.1.3 -------------------------------------------------------------------------------- -- Phase: build -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: run-depends -------------------------------------------------------------------------------- ===> graphlan-1.1.3 depends on file: /usr/local/bin/python2.7 - found -------------------------------------------------------------------------------- -- Phase: stage -------------------------------------------------------------------------------- ===> Staging for graphlan-1.1.3 ===> Generating temporary packing list /bin/cp -r /construction/biology/graphlan/nsegata-graphlan-66ec7cfce81e /construction/biology/graphlan/stage/usr/local/share/graphlan ====> Compressing man pages (compress-man) -------------------------------------------------------------------------------- -- Phase: package -------------------------------------------------------------------------------- ===> Building package for graphlan-1.1.3 file sizes/checksums [70]: . done packing files [70]: . done packing directories [0]: . done -------------------------------------------------- -- Termination -------------------------------------------------- Finished: Thursday, 7 MAR 2019 at 18:15:52 UTC Duration: 00:00:19