=> Building science/py-qcelemental@py36 Started : Wednesday, 24 JUL 2019 at 11:43:18 UTC Platform: 5.7-DEVELOPMENT DragonFly v5.7.0.83.g49866-DEVELOPMENT #40: Sun Jun 30 03:00:04 PDT 2019 root@pkgbox64.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 -------------------------------------------------- -- Environment -------------------------------------------------- UNAME_r=5.6-SYNTH UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=DragonFly 5.6-SYNTH UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 TERM=dumb PKG_CACHEDIR=/var/cache/pkg8 PKG_DBDIR=/var/db/pkg8 PORTSDIR=/xports LANG=C HOME=/root USER=root -------------------------------------------------- -- Options -------------------------------------------------- -------------------------------------------------- -- CONFIGURE_ENV -------------------------------------------------- PYTHON="/usr/local/bin/python3.6" XDG_DATA_HOME=/construction/science/py-qcelemental XDG_CONFIG_HOME=/construction/science/py-qcelemental HOME=/construction/science/py-qcelemental TMPDIR="/tmp" PATH=/construction/science/py-qcelemental/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc80 -------------------------------------------------- -- CONFIGURE_ARGS -------------------------------------------------- -------------------------------------------------- -- MAKE_ENV -------------------------------------------------- XDG_DATA_HOME=/construction/science/py-qcelemental XDG_CONFIG_HOME=/construction/science/py-qcelemental HOME=/construction/science/py-qcelemental TMPDIR="/tmp" PATH=/construction/science/py-qcelemental/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc80 LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local LOCALBASE=/usr/local NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" " LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" -------------------------------------------------- -- MAKE_ARGS -------------------------------------------------- DESTDIR=/construction/science/py-qcelemental/stage -------------------------------------------------- -- PLIST_SUB -------------------------------------------------- PYTHON_INCLUDEDIR=include/python3.6m PYTHON_LIBDIR=lib/python3.6 PYTHON_PLATFORM=dragonfly5 PYTHON_SITELIBDIR=lib/python3.6/site-packages PYTHON_SUFFIX=36 PYTHON_VER=3.6 PYTHON_VERSION=python3.6 PYTHON2="@comment " PYTHON3="" OSREL=5.6 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/qcelemental" EXAMPLESDIR="share/examples/qcelemental" DATADIR="share/qcelemental" WWWDIR="www/qcelemental" ETCDIR="etc/qcelemental" -------------------------------------------------- -- SUB_LIST -------------------------------------------------- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/qcelemental DOCSDIR=/usr/local/share/doc/qcelemental EXAMPLESDIR=/usr/local/share/examples/qcelemental WWWDIR=/usr/local/www/qcelemental ETCDIR=/usr/local/etc/qcelemental -------------------------------------------------- -- /etc/make.conf -------------------------------------------------- SYNTHPROFILE=Release-5.6 USE_PACKAGE_DEPENDS_ONLY=yes PACKAGE_BUILDING=yes BATCH=yes PKG_CREATE_VERBOSE=yes PORTSDIR=/xports DISTDIR=/distfiles WRKDIRPREFIX=/construction PORT_DBDIR=/options PACKAGES=/packages MAKE_JOBS_NUMBER_LIMIT=5 LICENSES_ACCEPTED= NONE HAVE_COMPAT_IA32_KERN= CONFIGURE_MAX_CMD_LEN=262144 _PERL5_FROM_BIN=5.28.1 _ALTCCVERSION_921dbbb2=none _OBJC_ALTCCVERSION_921dbbb2=none _SMP_CPUS=8 UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=500601 OSVERSION=9999999 OSREL=5.6 _OSRELEASE=5.6-SYNTH PYTHONBASE=/usr/local _PKG_CHECKED=1 -------------------------------------------------------------------------------- -- Phase: check-sanity -------------------------------------------------------------------------------- ===> License BSD3CLAUSE accepted by the user -------------------------------------------------------------------------------- -- Phase: pkg-depends -------------------------------------------------------------------------------- ===> py36-qcelemental-0.4.2 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.11.1.txz Installing pkg-1.11.1... Extracting pkg-1.11.1: .......... done ===> py36-qcelemental-0.4.2 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py36-qcelemental-0.4.2 -------------------------------------------------------------------------------- -- Phase: fetch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: fetch -------------------------------------------------------------------------------- ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by py36-qcelemental-0.4.2 for building -------------------------------------------------------------------------------- -- Phase: checksum -------------------------------------------------------------------------------- ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by py36-qcelemental-0.4.2 for building => SHA256 Checksum OK for qcelemental-0.4.2.tar.gz. -------------------------------------------------------------------------------- -- Phase: extract-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: extract -------------------------------------------------------------------------------- ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by py36-qcelemental-0.4.2 for building ===> Extracting for py36-qcelemental-0.4.2 => SHA256 Checksum OK for qcelemental-0.4.2.tar.gz. -------------------------------------------------------------------------------- -- Phase: patch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: patch -------------------------------------------------------------------------------- ===> Patching for py36-qcelemental-0.4.2 -------------------------------------------------------------------------------- -- Phase: build-depends -------------------------------------------------------------------------------- ===> py36-qcelemental-0.4.2 depends on package: py36-setuptools>0 - not found ===> Installing existing package /packages/All/py36-setuptools-41.0.1.txz Installing py36-setuptools-41.0.1... `-- Installing python36-3.6.9... | `-- Installing expat-2.2.6_1... | `-- Extracting expat-2.2.6_1: .......... done | `-- Installing gettext-runtime-0.20.1... | | `-- Installing indexinfo-0.3.1... | | `-- Extracting indexinfo-0.3.1: .... done | `-- Extracting gettext-runtime-0.20.1: .......... done | `-- Installing libffi-3.2.1_3... | `-- Extracting libffi-3.2.1_3: .......... done | `-- Installing libressl-2.9.2... | `-- Extracting libressl-2.9.2: .......... done | `-- Installing ncurses-6.1.20190525... | `-- Extracting ncurses-6.1.20190525: .......... done | `-- Installing readline-8.0.0... | `-- Extracting readline-8.0.0: .......... done `-- Extracting python36-3.6.9: .......... done Extracting py36-setuptools-41.0.1: .......... done Message from python36-3.6.9: =========================================================================== Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py36-gdbm databases/py-gdbm@py36 py36-sqlite3 databases/py-sqlite3@py36 py36-tkinter x11-toolkits/py-tkinter@py36 =========================================================================== ===> py36-qcelemental-0.4.2 depends on package: py36-setuptools>0 - found ===> Returning to build of py36-qcelemental-0.4.2 ===> py36-qcelemental-0.4.2 depends on file: /usr/local/bin/python3.6 - found -------------------------------------------------------------------------------- -- Phase: lib-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: configure -------------------------------------------------------------------------------- ===> Configuring for py36-qcelemental-0.4.2 running config /usr/local/lib/python3.6/site-packages/setuptools/dist.py:472: UserWarning: Normalizing 'v0.4.2' to '0.4.2' normalized_version, -------------------------------------------------------------------------------- -- Phase: build -------------------------------------------------------------------------------- ===> Building for py36-qcelemental-0.4.2 running build running build_py creating build creating build/lib creating build/lib/qcelemental copying qcelemental/exceptions.py -> build/lib/qcelemental copying qcelemental/testing.py -> build/lib/qcelemental copying qcelemental/_version.py -> build/lib/qcelemental copying qcelemental/extras.py -> build/lib/qcelemental copying qcelemental/__init__.py -> build/lib/qcelemental copying qcelemental/datum.py -> build/lib/qcelemental copying qcelemental/periodic_table.py -> build/lib/qcelemental copying qcelemental/covalent_radii.py -> build/lib/qcelemental creating build/lib/qcelemental/molparse copying qcelemental/molparse/from_schema.py -> build/lib/qcelemental/molparse copying qcelemental/molparse/__init__.py -> build/lib/qcelemental/molparse copying qcelemental/molparse/pubchem.py -> build/lib/qcelemental/molparse copying qcelemental/molparse/to_string.py -> build/lib/qcelemental/molparse copying qcelemental/molparse/chgmult.py -> build/lib/qcelemental/molparse copying qcelemental/molparse/to_schema.py -> build/lib/qcelemental/molparse copying qcelemental/molparse/from_arrays.py -> build/lib/qcelemental/molparse copying qcelemental/molparse/nucleus.py -> build/lib/qcelemental/molparse copying qcelemental/molparse/from_string.py -> build/lib/qcelemental/molparse copying qcelemental/molparse/regex.py -> build/lib/qcelemental/molparse creating build/lib/qcelemental/util copying qcelemental/util/np_blockwise.py -> build/lib/qcelemental/util copying qcelemental/util/test_gph_uno_bipartite.py -> build/lib/qcelemental/util copying qcelemental/util/misc.py -> build/lib/qcelemental/util copying qcelemental/util/gph_uno_bipartite.py -> build/lib/qcelemental/util copying qcelemental/util/internal.py -> build/lib/qcelemental/util copying qcelemental/util/importing.py -> build/lib/qcelemental/util copying qcelemental/util/scipy_hungarian.py -> build/lib/qcelemental/util copying qcelemental/util/__init__.py -> build/lib/qcelemental/util copying qcelemental/util/np_rand3drot.py -> build/lib/qcelemental/util copying qcelemental/util/test_scipy_hungarian.py -> build/lib/qcelemental/util copying qcelemental/util/itertools.py -> build/lib/qcelemental/util creating build/lib/qcelemental/physical_constants copying qcelemental/physical_constants/__init__.py -> build/lib/qcelemental/physical_constants copying qcelemental/physical_constants/ureg.py -> build/lib/qcelemental/physical_constants copying qcelemental/physical_constants/context.py -> build/lib/qcelemental/physical_constants creating build/lib/qcelemental/tests copying qcelemental/tests/test_units.py -> build/lib/qcelemental/tests copying qcelemental/tests/test_molparse_to_schema.py -> build/lib/qcelemental/tests copying qcelemental/tests/test_datum.py -> build/lib/qcelemental/tests copying qcelemental/tests/test_molparse_validate_and_fill_chgmult.py -> build/lib/qcelemental/tests copying qcelemental/tests/test_testing.py -> build/lib/qcelemental/tests copying qcelemental/tests/test_molparse_align_chiral.py -> build/lib/qcelemental/tests copying qcelemental/tests/test_molparse_from_string.py -> build/lib/qcelemental/tests copying qcelemental/tests/test_molparse_from_schema.py -> build/lib/qcelemental/tests copying qcelemental/tests/test_constants.py -> build/lib/qcelemental/tests copying qcelemental/tests/test_periodictable.py -> build/lib/qcelemental/tests copying qcelemental/tests/test_model_serials.py -> build/lib/qcelemental/tests copying qcelemental/tests/addons.py -> build/lib/qcelemental/tests copying qcelemental/tests/test_molparse_parse_nucleus_label.py -> build/lib/qcelemental/tests copying qcelemental/tests/test_importing.py -> build/lib/qcelemental/tests copying qcelemental/tests/test_molparse_to_string.py -> build/lib/qcelemental/tests copying qcelemental/tests/test_molparse_reconcile_nucleus.py -> build/lib/qcelemental/tests copying qcelemental/tests/test_covalentradii.py -> build/lib/qcelemental/tests copying qcelemental/tests/test_utils.py -> build/lib/qcelemental/tests copying qcelemental/tests/test_molparse_pubchem.py -> build/lib/qcelemental/tests copying qcelemental/tests/__init__.py -> build/lib/qcelemental/tests copying qcelemental/tests/test_molecule.py -> build/lib/qcelemental/tests creating build/lib/qcelemental/molutil copying qcelemental/molutil/align.py -> build/lib/qcelemental/molutil copying qcelemental/molutil/__init__.py -> build/lib/qcelemental/molutil copying qcelemental/molutil/test_align.py -> build/lib/qcelemental/molutil creating build/lib/qcelemental/data copying qcelemental/data/nist_2014_codata.py -> build/lib/qcelemental/data copying qcelemental/data/__init__.py -> build/lib/qcelemental/data copying qcelemental/data/nist_2011_atomic_weights.py -> build/lib/qcelemental/data copying qcelemental/data/alvarez_2008_covalent_radii.py -> build/lib/qcelemental/data creating build/lib/qcelemental/models copying qcelemental/models/common_models.py -> build/lib/qcelemental/models copying qcelemental/models/molecule.py -> build/lib/qcelemental/models copying qcelemental/models/__init__.py -> build/lib/qcelemental/models copying qcelemental/models/procedures.py -> build/lib/qcelemental/models copying qcelemental/models/results.py -> build/lib/qcelemental/models copying qcelemental/models/align.py -> build/lib/qcelemental/models running egg_info writing qcelemental.egg-info/PKG-INFO writing dependency_links to qcelemental.egg-info/dependency_links.txt writing requirements to qcelemental.egg-info/requires.txt writing top-level names to qcelemental.egg-info/top_level.txt reading manifest file 'qcelemental.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' /usr/local/lib/python3.6/site-packages/setuptools/dist.py:472: UserWarning: Normalizing 'v0.4.2' to '0.4.2' normalized_version, warning: no files found matching '*.json' under directory 'qcelemental' warning: no previously-included files matching '*.py' found under directory 'qcelemental/checkup_data' warning: no previously-included files matching '*.md' found under directory 'qcelemental/checkup_data' writing manifest file 'qcelemental.egg-info/SOURCES.txt' copying qcelemental/data/README.md -> build/lib/qcelemental/data UPDATING build/lib/qcelemental/_version.py set build/lib/qcelemental/_version.py to 'v0.4.2' -------------------------------------------------------------------------------- -- Phase: run-depends -------------------------------------------------------------------------------- ===> py36-qcelemental-0.4.2 depends on package: py36-numpy>0 - not found ===> Installing existing package /packages/All/py36-numpy-1.16.4,1.txz Installing py36-numpy-1.16.4,1... `-- Installing gcc8-8.3.0_2... | `-- Installing binutils-2.32_1,1... | `-- Extracting binutils-2.32_1,1: .......... done | `-- Installing gmp-6.1.2_1... | `-- Extracting gmp-6.1.2_1: .......... done | `-- Installing mpc-1.1.0_2... | | `-- Installing mpfr-4.0.2... | | `-- Extracting mpfr-4.0.2: .......... done | `-- Extracting mpc-1.1.0_2: ......... done `-- Extracting gcc8-8.3.0_2: .......... done `-- Installing openblas-0.2.20_8,1... `-- Extracting openblas-0.2.20_8,1: ......... done `-- Installing suitesparse-5.2.0_3... | `-- Installing lapack-3.5.0_7... | | `-- Installing blas-3.5.0_5... | | `-- Extracting blas-3.5.0_5: ....... done | `-- Extracting lapack-3.5.0_7: .......... done | `-- Installing metis-5.1.0_7... | `-- Extracting metis-5.1.0_7: .......... done `-- Extracting suitesparse-5.2.0_3: .......... done Extracting py36-numpy-1.16.4,1: .......... done Message from gcc8-8.3.0_2: To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc8 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. Message from metis-5.1.0_7: ===> NOTICE: The metis port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> py36-qcelemental-0.4.2 depends on package: py36-numpy>0 - found ===> Returning to build of py36-qcelemental-0.4.2 ===> py36-qcelemental-0.4.2 depends on package: py36-Pint>0 - not found ===> Installing existing package /packages/All/py36-Pint-0.8.1.txz Installing py36-Pint-0.8.1... Extracting py36-Pint-0.8.1: .......... done ===> py36-qcelemental-0.4.2 depends on package: py36-Pint>0 - found ===> Returning to build of py36-qcelemental-0.4.2 ===> py36-qcelemental-0.4.2 depends on package: py36-pydantic>=0.20 - not found ===> Installing existing package /packages/All/py36-pydantic-0.29.txz Installing py36-pydantic-0.29... `-- Installing py36-dataclasses-0.6... `-- Extracting py36-dataclasses-0.6: .......... done Extracting py36-pydantic-0.29: .......... done ===> py36-qcelemental-0.4.2 depends on package: py36-pydantic>=0.20 - found ===> Returning to build of py36-qcelemental-0.4.2 ===> py36-qcelemental-0.4.2 depends on package: py36-setuptools>0 - found ===> py36-qcelemental-0.4.2 depends on file: /usr/local/bin/python3.6 - found -------------------------------------------------------------------------------- -- Phase: stage -------------------------------------------------------------------------------- ===> Staging for py36-qcelemental-0.4.2 ===> Generating temporary packing list running install running build running build_py running egg_info writing qcelemental.egg-info/PKG-INFO writing dependency_links to qcelemental.egg-info/dependency_links.txt writing requirements to qcelemental.egg-info/requires.txt writing top-level names to qcelemental.egg-info/top_level.txt reading manifest file 'qcelemental.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' /usr/local/lib/python3.6/site-packages/setuptools/dist.py:472: UserWarning: Normalizing 'v0.4.2' to '0.4.2' normalized_version, warning: no files found matching '*.json' under directory 'qcelemental' warning: no previously-included files matching '*.py' found under directory 'qcelemental/checkup_data' warning: no previously-included files matching '*.md' found under directory 'qcelemental/checkup_data' writing manifest file 'qcelemental.egg-info/SOURCES.txt' UPDATING build/lib/qcelemental/_version.py set build/lib/qcelemental/_version.py to 'v0.4.2' running install_lib creating /construction/science/py-qcelemental/stage/usr/local/lib/python3.6 creating /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages creating /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental copying build/lib/qcelemental/__init__.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental copying build/lib/qcelemental/periodic_table.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental copying build/lib/qcelemental/extras.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental copying build/lib/qcelemental/covalent_radii.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental copying build/lib/qcelemental/testing.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental creating /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/util copying build/lib/qcelemental/util/misc.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/util copying build/lib/qcelemental/util/test_gph_uno_bipartite.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/util copying build/lib/qcelemental/util/itertools.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/util copying build/lib/qcelemental/util/gph_uno_bipartite.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/util copying build/lib/qcelemental/util/__init__.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/util copying build/lib/qcelemental/util/np_blockwise.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/util copying build/lib/qcelemental/util/scipy_hungarian.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/util copying build/lib/qcelemental/util/test_scipy_hungarian.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/util copying build/lib/qcelemental/util/internal.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/util copying build/lib/qcelemental/util/importing.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/util copying build/lib/qcelemental/util/np_rand3drot.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/util copying build/lib/qcelemental/_version.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental creating /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molutil copying build/lib/qcelemental/molutil/test_align.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molutil copying build/lib/qcelemental/molutil/align.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molutil copying build/lib/qcelemental/molutil/__init__.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molutil creating /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molparse copying build/lib/qcelemental/molparse/from_string.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molparse copying build/lib/qcelemental/molparse/from_arrays.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molparse copying build/lib/qcelemental/molparse/to_string.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molparse copying build/lib/qcelemental/molparse/to_schema.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molparse copying build/lib/qcelemental/molparse/from_schema.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molparse copying build/lib/qcelemental/molparse/chgmult.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molparse copying build/lib/qcelemental/molparse/__init__.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molparse copying build/lib/qcelemental/molparse/nucleus.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molparse copying build/lib/qcelemental/molparse/pubchem.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molparse copying build/lib/qcelemental/molparse/regex.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molparse copying build/lib/qcelemental/datum.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental creating /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/data copying build/lib/qcelemental/data/alvarez_2008_covalent_radii.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/data copying build/lib/qcelemental/data/nist_2014_codata.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/data copying build/lib/qcelemental/data/nist_2011_atomic_weights.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/data copying build/lib/qcelemental/data/__init__.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/data copying build/lib/qcelemental/data/README.md -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/data creating /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/models copying build/lib/qcelemental/models/procedures.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/models copying build/lib/qcelemental/models/common_models.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/models copying build/lib/qcelemental/models/molecule.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/models copying build/lib/qcelemental/models/align.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/models copying build/lib/qcelemental/models/results.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/models copying build/lib/qcelemental/models/__init__.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/models creating /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/physical_constants copying build/lib/qcelemental/physical_constants/context.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/physical_constants copying build/lib/qcelemental/physical_constants/ureg.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/physical_constants copying build/lib/qcelemental/physical_constants/__init__.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/physical_constants creating /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests copying build/lib/qcelemental/tests/test_molparse_reconcile_nucleus.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests copying build/lib/qcelemental/tests/test_testing.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests copying build/lib/qcelemental/tests/test_molparse_to_string.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests copying build/lib/qcelemental/tests/test_molparse_pubchem.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests copying build/lib/qcelemental/tests/test_molparse_to_schema.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests copying build/lib/qcelemental/tests/test_constants.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests copying build/lib/qcelemental/tests/test_datum.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests copying build/lib/qcelemental/tests/test_molparse_validate_and_fill_chgmult.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests copying build/lib/qcelemental/tests/test_importing.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests copying build/lib/qcelemental/tests/test_molparse_from_schema.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests copying build/lib/qcelemental/tests/test_utils.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests copying build/lib/qcelemental/tests/test_units.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests copying build/lib/qcelemental/tests/test_periodictable.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests copying build/lib/qcelemental/tests/test_model_serials.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests copying build/lib/qcelemental/tests/test_molparse_align_chiral.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests copying build/lib/qcelemental/tests/test_molparse_from_string.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests copying build/lib/qcelemental/tests/addons.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests copying build/lib/qcelemental/tests/test_molparse_parse_nucleus_label.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests copying build/lib/qcelemental/tests/__init__.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests copying build/lib/qcelemental/tests/test_molecule.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests copying build/lib/qcelemental/tests/test_covalentradii.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests copying build/lib/qcelemental/exceptions.py -> /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/__init__.py to __init__.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/periodic_table.py to periodic_table.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/extras.py to extras.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/covalent_radii.py to covalent_radii.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/testing.py to testing.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/util/misc.py to misc.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/util/test_gph_uno_bipartite.py to test_gph_uno_bipartite.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/util/itertools.py to itertools.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/util/gph_uno_bipartite.py to gph_uno_bipartite.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/util/__init__.py to __init__.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/util/np_blockwise.py to np_blockwise.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/util/scipy_hungarian.py to scipy_hungarian.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/util/test_scipy_hungarian.py to test_scipy_hungarian.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/util/internal.py to internal.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/util/importing.py to importing.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/util/np_rand3drot.py to np_rand3drot.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/_version.py to _version.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molutil/test_align.py to test_align.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molutil/align.py to align.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molutil/__init__.py to __init__.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molparse/from_string.py to from_string.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molparse/from_arrays.py to from_arrays.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molparse/to_string.py to to_string.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molparse/to_schema.py to to_schema.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molparse/from_schema.py to from_schema.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molparse/chgmult.py to chgmult.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molparse/__init__.py to __init__.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molparse/nucleus.py to nucleus.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molparse/pubchem.py to pubchem.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/molparse/regex.py to regex.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/datum.py to datum.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/data/alvarez_2008_covalent_radii.py to alvarez_2008_covalent_radii.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/data/nist_2014_codata.py to nist_2014_codata.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/data/nist_2011_atomic_weights.py to nist_2011_atomic_weights.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/data/__init__.py to __init__.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/models/procedures.py to procedures.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/models/common_models.py to common_models.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/models/molecule.py to molecule.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/models/align.py to align.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/models/results.py to results.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/models/__init__.py to __init__.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/physical_constants/context.py to context.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/physical_constants/ureg.py to ureg.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/physical_constants/__init__.py to __init__.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests/test_molparse_reconcile_nucleus.py to test_molparse_reconcile_nucleus.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests/test_testing.py to test_testing.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests/test_molparse_to_string.py to test_molparse_to_string.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests/test_molparse_pubchem.py to test_molparse_pubchem.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests/test_molparse_to_schema.py to test_molparse_to_schema.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests/test_constants.py to test_constants.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests/test_datum.py to test_datum.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests/test_molparse_validate_and_fill_chgmult.py to test_molparse_validate_and_fill_chgmult.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests/test_importing.py to test_importing.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests/test_molparse_from_schema.py to test_molparse_from_schema.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests/test_utils.py to test_utils.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests/test_units.py to test_units.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests/test_periodictable.py to test_periodictable.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests/test_model_serials.py to test_model_serials.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests/test_molparse_align_chiral.py to test_molparse_align_chiral.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests/test_molparse_from_string.py to test_molparse_from_string.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests/addons.py to addons.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests/test_molparse_parse_nucleus_label.py to test_molparse_parse_nucleus_label.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests/__init__.py to __init__.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests/test_molecule.py to test_molecule.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/tests/test_covalentradii.py to test_covalentradii.cpython-36.pyc byte-compiling /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental/exceptions.py to exceptions.cpython-36.pyc writing byte-compilation script '/tmp/tmpgxsqdr69.py' /usr/local/bin/python3.6 /tmp/tmpgxsqdr69.py removing /tmp/tmpgxsqdr69.py running install_egg_info Copying qcelemental.egg-info to /construction/science/py-qcelemental/stage/usr/local/lib/python3.6/site-packages/qcelemental-0.4.2-py3.6.egg-info running install_scripts writing list of installed files to '/construction/science/py-qcelemental/.PLIST.pymodtmp' ====> Compressing man pages (compress-man) -------------------------------------------------------------------------------- -- Phase: package -------------------------------------------------------------------------------- ===> Building package for py36-qcelemental-0.4.2 file sizes/checksums [208]: ... done packing files [208]: ... done packing directories [0]: . done -------------------------------------------------- -- Termination -------------------------------------------------- Finished: Wednesday, 24 JUL 2019 at 11:43:47 UTC Duration: 00:00:29