=> Building biology/py-dnaio@py36 Started : Tuesday, 23 JUL 2019 at 23:49:59 UTC Platform: 5.7-DEVELOPMENT DragonFly v5.7.0.83.g49866-DEVELOPMENT #40: Sun Jun 30 03:00:04 PDT 2019 root@pkgbox64.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 -------------------------------------------------- -- Environment -------------------------------------------------- UNAME_r=5.6-SYNTH UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=DragonFly 5.6-SYNTH UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 TERM=dumb PKG_CACHEDIR=/var/cache/pkg8 PKG_DBDIR=/var/db/pkg8 PORTSDIR=/xports LANG=C HOME=/root USER=root -------------------------------------------------- -- Options -------------------------------------------------- -------------------------------------------------- -- CONFIGURE_ENV -------------------------------------------------- PYTHON="/usr/local/bin/python3.6" XDG_DATA_HOME=/construction/biology/py-dnaio XDG_CONFIG_HOME=/construction/biology/py-dnaio HOME=/construction/biology/py-dnaio TMPDIR="/tmp" PATH=/construction/biology/py-dnaio/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc80 -------------------------------------------------- -- CONFIGURE_ARGS -------------------------------------------------- -------------------------------------------------- -- MAKE_ENV -------------------------------------------------- XDG_DATA_HOME=/construction/biology/py-dnaio XDG_CONFIG_HOME=/construction/biology/py-dnaio HOME=/construction/biology/py-dnaio TMPDIR="/tmp" PATH=/construction/biology/py-dnaio/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc80 LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local LOCALBASE=/usr/local NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" " LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" -------------------------------------------------- -- MAKE_ARGS -------------------------------------------------- DESTDIR=/construction/biology/py-dnaio/stage -------------------------------------------------- -- PLIST_SUB -------------------------------------------------- PYTHON_INCLUDEDIR=include/python3.6m PYTHON_LIBDIR=lib/python3.6 PYTHON_PLATFORM=dragonfly5 PYTHON_SITELIBDIR=lib/python3.6/site-packages PYTHON_SUFFIX=36 PYTHON_VER=3.6 PYTHON_VERSION=python3.6 PYTHON2="@comment " PYTHON3="" OSREL=5.6 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/dnaio" EXAMPLESDIR="share/examples/dnaio" DATADIR="share/dnaio" WWWDIR="www/dnaio" ETCDIR="etc/dnaio" -------------------------------------------------- -- SUB_LIST -------------------------------------------------- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/dnaio DOCSDIR=/usr/local/share/doc/dnaio EXAMPLESDIR=/usr/local/share/examples/dnaio WWWDIR=/usr/local/www/dnaio ETCDIR=/usr/local/etc/dnaio -------------------------------------------------- -- /etc/make.conf -------------------------------------------------- SYNTHPROFILE=Release-5.6 USE_PACKAGE_DEPENDS_ONLY=yes PACKAGE_BUILDING=yes BATCH=yes PKG_CREATE_VERBOSE=yes PORTSDIR=/xports DISTDIR=/distfiles WRKDIRPREFIX=/construction PORT_DBDIR=/options PACKAGES=/packages MAKE_JOBS_NUMBER_LIMIT=5 LICENSES_ACCEPTED= NONE HAVE_COMPAT_IA32_KERN= CONFIGURE_MAX_CMD_LEN=262144 _PERL5_FROM_BIN=5.28.1 _ALTCCVERSION_921dbbb2=none _OBJC_ALTCCVERSION_921dbbb2=none _SMP_CPUS=8 UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=500601 OSVERSION=9999999 OSREL=5.6 _OSRELEASE=5.6-SYNTH PYTHONBASE=/usr/local _PKG_CHECKED=1 -------------------------------------------------------------------------------- -- Phase: check-sanity -------------------------------------------------------------------------------- ===> License MIT accepted by the user -------------------------------------------------------------------------------- -- Phase: pkg-depends -------------------------------------------------------------------------------- ===> py36-dnaio-0.3 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.11.1.txz Installing pkg-1.11.1... Extracting pkg-1.11.1: .......... done ===> py36-dnaio-0.3 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py36-dnaio-0.3 -------------------------------------------------------------------------------- -- Phase: fetch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: fetch -------------------------------------------------------------------------------- ===> License MIT accepted by the user ===> Fetching all distfiles required by py36-dnaio-0.3 for building -------------------------------------------------------------------------------- -- Phase: checksum -------------------------------------------------------------------------------- ===> License MIT accepted by the user ===> Fetching all distfiles required by py36-dnaio-0.3 for building => SHA256 Checksum OK for dnaio-0.3.tar.gz. -------------------------------------------------------------------------------- -- Phase: extract-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: extract -------------------------------------------------------------------------------- ===> License MIT accepted by the user ===> Fetching all distfiles required by py36-dnaio-0.3 for building ===> Extracting for py36-dnaio-0.3 => SHA256 Checksum OK for dnaio-0.3.tar.gz. -------------------------------------------------------------------------------- -- Phase: patch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: patch -------------------------------------------------------------------------------- ===> Patching for py36-dnaio-0.3 -------------------------------------------------------------------------------- -- Phase: build-depends -------------------------------------------------------------------------------- ===> py36-dnaio-0.3 depends on package: py36-setuptools>0 - not found ===> Installing existing package /packages/All/py36-setuptools-41.0.1.txz Installing py36-setuptools-41.0.1... `-- Installing python36-3.6.9... | `-- Installing expat-2.2.6_1... | `-- Extracting expat-2.2.6_1: .......... done | `-- Installing gettext-runtime-0.20.1... | | `-- Installing indexinfo-0.3.1... | | `-- Extracting indexinfo-0.3.1: .... done | `-- Extracting gettext-runtime-0.20.1: .......... done | `-- Installing libffi-3.2.1_3... | `-- Extracting libffi-3.2.1_3: .......... done | `-- Installing libressl-2.9.2... | `-- Extracting libressl-2.9.2: .......... done | `-- Installing ncurses-6.1.20190525... | `-- Extracting ncurses-6.1.20190525: .......... done | `-- Installing readline-8.0.0... | `-- Extracting readline-8.0.0: .......... done `-- Extracting python36-3.6.9: .......... done Extracting py36-setuptools-41.0.1: .......... done Message from python36-3.6.9: =========================================================================== Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py36-gdbm databases/py-gdbm@py36 py36-sqlite3 databases/py-sqlite3@py36 py36-tkinter x11-toolkits/py-tkinter@py36 =========================================================================== ===> py36-dnaio-0.3 depends on package: py36-setuptools>0 - found ===> Returning to build of py36-dnaio-0.3 ===> py36-dnaio-0.3 depends on file: /usr/local/bin/python3.6 - found -------------------------------------------------------------------------------- -- Phase: lib-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: configure -------------------------------------------------------------------------------- ===> Configuring for py36-dnaio-0.3 running config -------------------------------------------------------------------------------- -- Phase: build -------------------------------------------------------------------------------- ===> Building for py36-dnaio-0.3 running build running build_py creating build creating build/lib.dragonfly-5.6-SYNTH-x86_64-3.6 creating build/lib.dragonfly-5.6-SYNTH-x86_64-3.6/dnaio copying src/dnaio/__init__.py -> build/lib.dragonfly-5.6-SYNTH-x86_64-3.6/dnaio copying src/dnaio/chunks.py -> build/lib.dragonfly-5.6-SYNTH-x86_64-3.6/dnaio copying src/dnaio/readers.py -> build/lib.dragonfly-5.6-SYNTH-x86_64-3.6/dnaio copying src/dnaio/writers.py -> build/lib.dragonfly-5.6-SYNTH-x86_64-3.6/dnaio copying src/dnaio/_util.py -> build/lib.dragonfly-5.6-SYNTH-x86_64-3.6/dnaio copying src/dnaio/exceptions.py -> build/lib.dragonfly-5.6-SYNTH-x86_64-3.6/dnaio copying src/dnaio/_version.py -> build/lib.dragonfly-5.6-SYNTH-x86_64-3.6/dnaio UPDATING build/lib.dragonfly-5.6-SYNTH-x86_64-3.6/dnaio/_version.py set build/lib.dragonfly-5.6-SYNTH-x86_64-3.6/dnaio/_version.py to '0.3' running build_ext building 'dnaio._core' extension creating build/temp.dragonfly-5.6-SYNTH-x86_64-3.6 creating build/temp.dragonfly-5.6-SYNTH-x86_64-3.6/src creating build/temp.dragonfly-5.6-SYNTH-x86_64-3.6/src/dnaio cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/local/include/python3.6m -c src/dnaio/_core.c -o build/temp.dragonfly-5.6-SYNTH-x86_64-3.6/src/dnaio/_core.o cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.6-SYNTH-x86_64-3.6/src/dnaio/_core.o -L/usr/local/lib -lpython3.6m -o build/lib.dragonfly-5.6-SYNTH-x86_64-3.6/dnaio/_core.so -------------------------------------------------------------------------------- -- Phase: run-depends -------------------------------------------------------------------------------- ===> py36-dnaio-0.3 depends on package: py36-setuptools>0 - found ===> py36-dnaio-0.3 depends on file: /usr/local/bin/python3.6 - found -------------------------------------------------------------------------------- -- Phase: stage -------------------------------------------------------------------------------- ===> Staging for py36-dnaio-0.3 ===> Generating temporary packing list running install running build running build_py UPDATING build/lib.dragonfly-5.6-SYNTH-x86_64-3.6/dnaio/_version.py set build/lib.dragonfly-5.6-SYNTH-x86_64-3.6/dnaio/_version.py to '0.3' running build_ext running install_lib creating /construction/biology/py-dnaio/stage/usr/local/lib/python3.6 creating /construction/biology/py-dnaio/stage/usr/local/lib/python3.6/site-packages creating /construction/biology/py-dnaio/stage/usr/local/lib/python3.6/site-packages/dnaio copying build/lib.dragonfly-5.6-SYNTH-x86_64-3.6/dnaio/__init__.py -> /construction/biology/py-dnaio/stage/usr/local/lib/python3.6/site-packages/dnaio copying build/lib.dragonfly-5.6-SYNTH-x86_64-3.6/dnaio/_version.py -> /construction/biology/py-dnaio/stage/usr/local/lib/python3.6/site-packages/dnaio copying build/lib.dragonfly-5.6-SYNTH-x86_64-3.6/dnaio/exceptions.py -> /construction/biology/py-dnaio/stage/usr/local/lib/python3.6/site-packages/dnaio copying build/lib.dragonfly-5.6-SYNTH-x86_64-3.6/dnaio/readers.py -> /construction/biology/py-dnaio/stage/usr/local/lib/python3.6/site-packages/dnaio copying build/lib.dragonfly-5.6-SYNTH-x86_64-3.6/dnaio/writers.py -> /construction/biology/py-dnaio/stage/usr/local/lib/python3.6/site-packages/dnaio copying build/lib.dragonfly-5.6-SYNTH-x86_64-3.6/dnaio/chunks.py -> /construction/biology/py-dnaio/stage/usr/local/lib/python3.6/site-packages/dnaio copying build/lib.dragonfly-5.6-SYNTH-x86_64-3.6/dnaio/_util.py -> /construction/biology/py-dnaio/stage/usr/local/lib/python3.6/site-packages/dnaio copying build/lib.dragonfly-5.6-SYNTH-x86_64-3.6/dnaio/_core.so -> /construction/biology/py-dnaio/stage/usr/local/lib/python3.6/site-packages/dnaio byte-compiling /construction/biology/py-dnaio/stage/usr/local/lib/python3.6/site-packages/dnaio/__init__.py to __init__.cpython-36.pyc byte-compiling /construction/biology/py-dnaio/stage/usr/local/lib/python3.6/site-packages/dnaio/_version.py to _version.cpython-36.pyc byte-compiling /construction/biology/py-dnaio/stage/usr/local/lib/python3.6/site-packages/dnaio/exceptions.py to exceptions.cpython-36.pyc byte-compiling /construction/biology/py-dnaio/stage/usr/local/lib/python3.6/site-packages/dnaio/readers.py to readers.cpython-36.pyc byte-compiling /construction/biology/py-dnaio/stage/usr/local/lib/python3.6/site-packages/dnaio/writers.py to writers.cpython-36.pyc byte-compiling /construction/biology/py-dnaio/stage/usr/local/lib/python3.6/site-packages/dnaio/chunks.py to chunks.cpython-36.pyc byte-compiling /construction/biology/py-dnaio/stage/usr/local/lib/python3.6/site-packages/dnaio/_util.py to _util.cpython-36.pyc writing byte-compilation script '/tmp/tmpt0unfsll.py' /usr/local/bin/python3.6 /tmp/tmpt0unfsll.py removing /tmp/tmpt0unfsll.py running install_egg_info running egg_info writing src/dnaio.egg-info/PKG-INFO writing dependency_links to src/dnaio.egg-info/dependency_links.txt writing requirements to src/dnaio.egg-info/requires.txt writing top-level names to src/dnaio.egg-info/top_level.txt reading manifest file 'src/dnaio.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'src/dnaio.egg-info/SOURCES.txt' Copying src/dnaio.egg-info to /construction/biology/py-dnaio/stage/usr/local/lib/python3.6/site-packages/dnaio-0.3-py3.6.egg-info running install_scripts writing list of installed files to '/construction/biology/py-dnaio/.PLIST.pymodtmp' ====> Compressing man pages (compress-man) -------------------------------------------------------------------------------- -- Phase: package -------------------------------------------------------------------------------- ===> Building package for py36-dnaio-0.3 file sizes/checksums [30]: . done packing files [30]: . done packing directories [0]: . done -------------------------------------------------- -- Termination -------------------------------------------------- Finished: Tuesday, 23 JUL 2019 at 23:50:58 UTC Duration: 00:00:58