=> Building math/py-scikit-umfpack@py36 Started : Tuesday, 9 JUL 2019 at 12:49:40 UTC Platform: 5.7-DEVELOPMENT DragonFly v5.7.0.83.g49866-DEVELOPMENT #40: Sun Jun 30 03:00:04 PDT 2019 root@pkgbox64.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 -------------------------------------------------- -- Environment -------------------------------------------------- UNAME_r=5.4-SYNTH UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=DragonFly 5.4-SYNTH UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 TERM=dumb PKG_CACHEDIR=/var/cache/pkg8 PKG_DBDIR=/var/db/pkg8 PORTSDIR=/xports LANG=C HOME=/root USER=root -------------------------------------------------- -- Options -------------------------------------------------- -------------------------------------------------- -- CONFIGURE_ENV -------------------------------------------------- PYTHON="/usr/local/bin/python3.6" XDG_DATA_HOME=/construction/math/py-scikit-umfpack XDG_CONFIG_HOME=/construction/math/py-scikit-umfpack HOME=/construction/math/py-scikit-umfpack TMPDIR="/tmp" PATH=/construction/math/py-scikit-umfpack/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc80 -------------------------------------------------- -- CONFIGURE_ARGS -------------------------------------------------- -------------------------------------------------- -- MAKE_ENV -------------------------------------------------- XDG_DATA_HOME=/construction/math/py-scikit-umfpack XDG_CONFIG_HOME=/construction/math/py-scikit-umfpack HOME=/construction/math/py-scikit-umfpack TMPDIR="/tmp" PATH=/construction/math/py-scikit-umfpack/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc80 LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local LOCALBASE=/usr/local NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" " LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" -------------------------------------------------- -- MAKE_ARGS -------------------------------------------------- DESTDIR=/construction/math/py-scikit-umfpack/stage -------------------------------------------------- -- PLIST_SUB -------------------------------------------------- PYTHON_INCLUDEDIR=include/python3.6m PYTHON_LIBDIR=lib/python3.6 PYTHON_PLATFORM=dragonfly5 PYTHON_SITELIBDIR=lib/python3.6/site-packages PYTHON_SUFFIX=36 PYTHON_VER=3.6 PYTHON_VERSION=python3.6 PYTHON2="@comment " PYTHON3="" OSREL=5.4 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/scikit-umfpack" EXAMPLESDIR="share/examples/scikit-umfpack" DATADIR="share/scikit-umfpack" WWWDIR="www/scikit-umfpack" ETCDIR="etc/scikit-umfpack" -------------------------------------------------- -- SUB_LIST -------------------------------------------------- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/scikit-umfpack DOCSDIR=/usr/local/share/doc/scikit-umfpack EXAMPLESDIR=/usr/local/share/examples/scikit-umfpack WWWDIR=/usr/local/www/scikit-umfpack ETCDIR=/usr/local/etc/scikit-umfpack -------------------------------------------------- -- /etc/make.conf -------------------------------------------------- SYNTHPROFILE=Release-5.4 USE_PACKAGE_DEPENDS_ONLY=yes PACKAGE_BUILDING=yes BATCH=yes PKG_CREATE_VERBOSE=yes PORTSDIR=/xports DISTDIR=/distfiles WRKDIRPREFIX=/construction PORT_DBDIR=/options PACKAGES=/packages MAKE_JOBS_NUMBER_LIMIT=5 HAVE_COMPAT_IA32_KERN= CONFIGURE_MAX_CMD_LEN=262144 _PERL5_FROM_BIN=5.28.1 _ALTCCVERSION_921dbbb2=none _OBJC_ALTCCVERSION_921dbbb2=none _SMP_CPUS=8 UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=500400 OSVERSION=9999999 OSREL=5.4 _OSRELEASE=5.4-SYNTH PYTHONBASE=/usr/local _PKG_CHECKED=1 -------------------------------------------------------------------------------- -- Phase: check-sanity -------------------------------------------------------------------------------- ===> License BSD2CLAUSE accepted by the user -------------------------------------------------------------------------------- -- Phase: pkg-depends -------------------------------------------------------------------------------- ===> py36-scikit-umfpack-0.3.2_1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.11.1.txz Installing pkg-1.11.1... Extracting pkg-1.11.1: .......... done ===> py36-scikit-umfpack-0.3.2_1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py36-scikit-umfpack-0.3.2_1 -------------------------------------------------------------------------------- -- Phase: fetch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: fetch -------------------------------------------------------------------------------- ===> License BSD2CLAUSE accepted by the user ===> Fetching all distfiles required by py36-scikit-umfpack-0.3.2_1 for building -------------------------------------------------------------------------------- -- Phase: checksum -------------------------------------------------------------------------------- ===> License BSD2CLAUSE accepted by the user ===> Fetching all distfiles required by py36-scikit-umfpack-0.3.2_1 for building => SHA256 Checksum OK for scikit-umfpack-0.3.2.tar.gz. -------------------------------------------------------------------------------- -- Phase: extract-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: extract -------------------------------------------------------------------------------- ===> License BSD2CLAUSE accepted by the user ===> Fetching all distfiles required by py36-scikit-umfpack-0.3.2_1 for building ===> Extracting for py36-scikit-umfpack-0.3.2_1 => SHA256 Checksum OK for scikit-umfpack-0.3.2.tar.gz. -------------------------------------------------------------------------------- -- Phase: patch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: patch -------------------------------------------------------------------------------- ===> Patching for py36-scikit-umfpack-0.3.2_1 -------------------------------------------------------------------------------- -- Phase: build-depends -------------------------------------------------------------------------------- ===> py36-scikit-umfpack-0.3.2_1 depends on package: py36-numpy>0 - not found ===> Installing existing package /packages/All/py36-numpy-1.16.1_2,1.txz Installing py36-numpy-1.16.1_2,1... `-- Installing gcc8-8.3.0_2... | `-- Installing binutils-2.32_1,1... | | `-- Installing gettext-runtime-0.20.1... | | `-- Installing indexinfo-0.3.1... | | `-- Extracting indexinfo-0.3.1: .... done | | `-- Extracting gettext-runtime-0.20.1: .......... done | `-- Extracting binutils-2.32_1,1: .......... done | `-- Installing gmp-6.1.2_1... | `-- Extracting gmp-6.1.2_1: .......... done | `-- Installing mpc-1.1.0_2... | | `-- Installing mpfr-4.0.2... | | `-- Extracting mpfr-4.0.2: .......... done | `-- Extracting mpc-1.1.0_2: ......... done `-- Extracting gcc8-8.3.0_2: .......... done `-- Installing openblas-0.2.20_8,1... `-- Extracting openblas-0.2.20_8,1: ......... done `-- Installing py36-setuptools-41.0.0... | `-- Installing python36-3.6.8_2... | | `-- Installing expat-2.2.6_1... | | `-- Extracting expat-2.2.6_1: .......... done | | `-- Installing libffi-3.2.1_3... | | `-- Extracting libffi-3.2.1_3: .......... done | | `-- Installing libressl-2.9.2... | | `-- Extracting libressl-2.9.2: .......... done | | `-- Installing ncurses-6.1.20190525... | | `-- Extracting ncurses-6.1.20190525: .......... done | | `-- Installing readline-8.0.0... | | `-- Extracting readline-8.0.0: .......... done | `-- Extracting python36-3.6.8_2: .......... done `-- Extracting py36-setuptools-41.0.0: .......... done `-- Installing suitesparse-5.2.0_3... | `-- Installing lapack-3.5.0_7... | | `-- Installing blas-3.5.0_5... | | `-- Extracting blas-3.5.0_5: ....... done | `-- Extracting lapack-3.5.0_7: .......... done | `-- Installing metis-5.1.0_7... | `-- Extracting metis-5.1.0_7: .......... done `-- Extracting suitesparse-5.2.0_3: .......... done Extracting py36-numpy-1.16.1_2,1: .......... done Message from gcc8-8.3.0_2: To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc8 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. Message from python36-3.6.8_2: =========================================================================== Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py36-gdbm databases/py-gdbm@py36 py36-sqlite3 databases/py-sqlite3@py36 py36-tkinter x11-toolkits/py-tkinter@py36 =========================================================================== Message from metis-5.1.0_7: ===> NOTICE: The metis port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> py36-scikit-umfpack-0.3.2_1 depends on package: py36-numpy>0 - found ===> Returning to build of py36-scikit-umfpack-0.3.2_1 ===> py36-scikit-umfpack-0.3.2_1 depends on package: py36-scipy>0 - not found ===> Installing existing package /packages/All/py36-scipy-1.2.0_1.txz Installing py36-scipy-1.2.0_1... Extracting py36-scipy-1.2.0_1: .......... done ===> py36-scikit-umfpack-0.3.2_1 depends on package: py36-scipy>0 - found ===> Returning to build of py36-scikit-umfpack-0.3.2_1 ===> py36-scikit-umfpack-0.3.2_1 depends on executable: swig3.0 - not found ===> Installing existing package /packages/All/swig30-3.0.12.txz Installing swig30-3.0.12... `-- Installing lua52-5.2.4... | `-- Installing libedit-3.1.20190324,1... | `-- Extracting libedit-3.1.20190324,1: .......... done `-- Extracting lua52-5.2.4: ......... done `-- Installing pcre-8.43_1... `-- Extracting pcre-8.43_1: .......... done Extracting swig30-3.0.12: .......... done ===> py36-scikit-umfpack-0.3.2_1 depends on executable: swig3.0 - found ===> Returning to build of py36-scikit-umfpack-0.3.2_1 ===> py36-scikit-umfpack-0.3.2_1 depends on executable: cython-3.6 - not found ===> Installing existing package /packages/All/py36-cython-0.29_1.txz Installing py36-cython-0.29_1... Extracting py36-cython-0.29_1: .......... done ===> py36-scikit-umfpack-0.3.2_1 depends on executable: cython-3.6 - found ===> Returning to build of py36-scikit-umfpack-0.3.2_1 ===> py36-scikit-umfpack-0.3.2_1 depends on package: py36-setuptools>0 - found ===> py36-scikit-umfpack-0.3.2_1 depends on file: /usr/local/bin/python3.6 - found -------------------------------------------------------------------------------- -- Phase: lib-depends -------------------------------------------------------------------------------- ===> py36-scikit-umfpack-0.3.2_1 depends on shared library: libblas.so - found (/usr/local/lib/libblas.so) ===> py36-scikit-umfpack-0.3.2_1 depends on shared library: libcblas.so - not found ===> Installing existing package /packages/All/cblas-1.0_11.txz Installing cblas-1.0_11... Extracting cblas-1.0_11: ......... done Message from cblas-1.0_11: ===> NOTICE: The cblas port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> py36-scikit-umfpack-0.3.2_1 depends on shared library: libcblas.so - found (/usr/local/lib/libcblas.so) ===> Returning to build of py36-scikit-umfpack-0.3.2_1 ===> py36-scikit-umfpack-0.3.2_1 depends on shared library: libumfpack.so - found (/usr/local/lib/libumfpack.so) -------------------------------------------------------------------------------- -- Phase: configure -------------------------------------------------------------------------------- ===> Configuring for py36-scikit-umfpack-0.3.2_1 umfpack_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpiqekjwmx/tmp creating /tmp/tmpiqekjwmx/tmp/tmpiqekjwmx compile options: '-MMD -MF /tmp/tmpiqekjwmx/file.c.d -c' cc: /tmp/tmpiqekjwmx/file.c amd_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmphv3d_vuu/tmp creating /tmp/tmphv3d_vuu/tmp/tmphv3d_vuu compile options: '-MMD -MF /tmp/tmphv3d_vuu/file.c.d -c' cc: /tmp/tmphv3d_vuu/file.c customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpsnwif2rc/tmp creating /tmp/tmpsnwif2rc/tmp/tmpsnwif2rc compile options: '-MMD -MF /tmp/tmpsnwif2rc/file.c.d -c' cc: /tmp/tmpsnwif2rc/file.c FOUND: libraries = ['amd', 'amd'] library_dirs = ['/usr/local/lib'] include_dirs = ['/usr/local/include/suitesparse'] define_macros = [('SCIPY_AMD_H', None)] swig_opts = ['-I/usr/local/include/suitesparse'] customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp1281s82p/tmp creating /tmp/tmp1281s82p/tmp/tmp1281s82p compile options: '-MMD -MF /tmp/tmp1281s82p/file.c.d -c' cc: /tmp/tmp1281s82p/file.c FOUND: libraries = ['umfpack', 'amd', 'amd', 'umfpack'] library_dirs = ['/usr/local/lib'] include_dirs = ['/usr/local/include/suitesparse'] define_macros = [('SCIPY_UMFPACK_H', None), ('SCIPY_AMD_H', None)] swig_opts = ['-I/usr/local/include/suitesparse', '-I/usr/local/include/suitesparse'] blas_opt_info: blas_mkl_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpoap49ve2/tmp creating /tmp/tmpoap49ve2/tmp/tmpoap49ve2 compile options: '-MMD -MF /tmp/tmpoap49ve2/file.c.d -c' cc: /tmp/tmpoap49ve2/file.c libraries mkl_rt not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.4/8.3.0/../../../'] NOT AVAILABLE blis_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpsd8sbdyu/tmp creating /tmp/tmpsd8sbdyu/tmp/tmpsd8sbdyu compile options: '-MMD -MF /tmp/tmpsd8sbdyu/file.c.d -c' cc: /tmp/tmpsd8sbdyu/file.c libraries blis not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.4/8.3.0/../../../'] NOT AVAILABLE atlas_3_10_blas_threads_info: Setting PTATLAS=ATLAS customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpdjy51n7r/tmp creating /tmp/tmpdjy51n7r/tmp/tmpdjy51n7r compile options: '-MMD -MF /tmp/tmpdjy51n7r/file.c.d -c' cc: /tmp/tmpdjy51n7r/file.c libraries tatlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.4/8.3.0/../../../'] NOT AVAILABLE atlas_3_10_blas_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpdkikj55k/tmp creating /tmp/tmpdkikj55k/tmp/tmpdkikj55k compile options: '-MMD -MF /tmp/tmpdkikj55k/file.c.d -c' cc: /tmp/tmpdkikj55k/file.c libraries satlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.4/8.3.0/../../../'] NOT AVAILABLE atlas_blas_threads_info: Setting PTATLAS=ATLAS customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpm9og1zn8/tmp creating /tmp/tmpm9og1zn8/tmp/tmpm9og1zn8 compile options: '-MMD -MF /tmp/tmpm9og1zn8/file.c.d -c' cc: /tmp/tmpm9og1zn8/file.c libraries ptf77blas,ptcblas,atlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.4/8.3.0/../../../'] NOT AVAILABLE atlas_blas_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpy1f7e7ue/tmp creating /tmp/tmpy1f7e7ue/tmp/tmpy1f7e7ue compile options: '-MMD -MF /tmp/tmpy1f7e7ue/file.c.d -c' cc: /tmp/tmpy1f7e7ue/file.c libraries f77blas,cblas,atlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.4/8.3.0/../../../'] NOT AVAILABLE accelerate_info: NOT AVAILABLE blas_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmppfycbo8b/tmp creating /tmp/tmppfycbo8b/tmp/tmppfycbo8b compile options: '-MMD -MF /tmp/tmppfycbo8b/file.c.d -c' cc: /tmp/tmppfycbo8b/file.c customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpmj6hkqr1/tmp creating /tmp/tmpmj6hkqr1/tmp/tmpmj6hkqr1 compile options: '-MMD -MF /tmp/tmpmj6hkqr1/file.c.d -c' cc: /tmp/tmpmj6hkqr1/file.c C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpds1_khs_/tmp creating /tmp/tmpds1_khs_/tmp/tmpds1_khs_ compile options: '-I/usr/include -I/usr/local/include -I/usr/local/include/suitesparse -c' cc: /tmp/tmpds1_khs_/source.c cc /tmp/tmpds1_khs_/tmp/tmpds1_khs_/source.o -L/usr/local/lib -lcblas -o /tmp/tmpds1_khs_/a.out customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp71hj3mj2/tmp creating /tmp/tmp71hj3mj2/tmp/tmp71hj3mj2 compile options: '-MMD -MF /tmp/tmp71hj3mj2/file.c.d -c' cc: /tmp/tmp71hj3mj2/file.c FOUND: libraries = ['cblas', 'blas'] library_dirs = ['/usr/local/lib'] include_dirs = ['/usr/include', '/usr/local/include', '/usr/local/include/suitesparse'] language = c define_macros = [('HAVE_CBLAS', None)] FOUND: define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)] libraries = ['cblas', 'blas'] library_dirs = ['/usr/local/lib'] include_dirs = ['/usr/include', '/usr/local/include', '/usr/local/include/suitesparse'] language = c running config /usr/local/lib/python3.6/site-packages/numpy/distutils/system_info.py:638: UserWarning: Atlas (http://math-atlas.sourceforge.net/) libraries not found. Directories to search for the libraries can be specified in the numpy/distutils/site.cfg file (section [atlas]) or by setting the ATLAS environment variable. self.calc_info() -------------------------------------------------------------------------------- -- Phase: build -------------------------------------------------------------------------------- ===> Building for py36-scikit-umfpack-0.3.2_1 umfpack_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmppexat29n/tmp creating /tmp/tmppexat29n/tmp/tmppexat29n compile options: '-MMD -MF /tmp/tmppexat29n/file.c.d -c' cc: /tmp/tmppexat29n/file.c amd_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpz2gxlrst/tmp creating /tmp/tmpz2gxlrst/tmp/tmpz2gxlrst compile options: '-MMD -MF /tmp/tmpz2gxlrst/file.c.d -c' cc: /tmp/tmpz2gxlrst/file.c customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp0gul1mxv/tmp creating /tmp/tmp0gul1mxv/tmp/tmp0gul1mxv compile options: '-MMD -MF /tmp/tmp0gul1mxv/file.c.d -c' cc: /tmp/tmp0gul1mxv/file.c FOUND: libraries = ['amd', 'amd'] library_dirs = ['/usr/local/lib'] include_dirs = ['/usr/local/include/suitesparse'] define_macros = [('SCIPY_AMD_H', None)] swig_opts = ['-I/usr/local/include/suitesparse'] customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpc11nzb66/tmp creating /tmp/tmpc11nzb66/tmp/tmpc11nzb66 compile options: '-MMD -MF /tmp/tmpc11nzb66/file.c.d -c' cc: /tmp/tmpc11nzb66/file.c FOUND: libraries = ['umfpack', 'amd', 'amd', 'umfpack'] library_dirs = ['/usr/local/lib'] include_dirs = ['/usr/local/include/suitesparse'] define_macros = [('SCIPY_UMFPACK_H', None), ('SCIPY_AMD_H', None)] swig_opts = ['-I/usr/local/include/suitesparse', '-I/usr/local/include/suitesparse'] blas_opt_info: blas_mkl_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpl4e2gt3l/tmp creating /tmp/tmpl4e2gt3l/tmp/tmpl4e2gt3l compile options: '-MMD -MF /tmp/tmpl4e2gt3l/file.c.d -c' cc: /tmp/tmpl4e2gt3l/file.c libraries mkl_rt not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.4/8.3.0/../../../'] NOT AVAILABLE blis_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmps7mr7awh/tmp creating /tmp/tmps7mr7awh/tmp/tmps7mr7awh compile options: '-MMD -MF /tmp/tmps7mr7awh/file.c.d -c' cc: /tmp/tmps7mr7awh/file.c libraries blis not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.4/8.3.0/../../../'] NOT AVAILABLE atlas_3_10_blas_threads_info: Setting PTATLAS=ATLAS customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpvzq3xf_x/tmp creating /tmp/tmpvzq3xf_x/tmp/tmpvzq3xf_x compile options: '-MMD -MF /tmp/tmpvzq3xf_x/file.c.d -c' cc: /tmp/tmpvzq3xf_x/file.c libraries tatlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.4/8.3.0/../../../'] NOT AVAILABLE atlas_3_10_blas_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpt_bred9n/tmp creating /tmp/tmpt_bred9n/tmp/tmpt_bred9n compile options: '-MMD -MF /tmp/tmpt_bred9n/file.c.d -c' cc: /tmp/tmpt_bred9n/file.c libraries satlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.4/8.3.0/../../../'] NOT AVAILABLE atlas_blas_threads_info: Setting PTATLAS=ATLAS customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpesm7d08b/tmp creating /tmp/tmpesm7d08b/tmp/tmpesm7d08b compile options: '-MMD -MF /tmp/tmpesm7d08b/file.c.d -c' cc: /tmp/tmpesm7d08b/file.c libraries ptf77blas,ptcblas,atlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.4/8.3.0/../../../'] NOT AVAILABLE atlas_blas_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpojmwuff7/tmp creating /tmp/tmpojmwuff7/tmp/tmpojmwuff7 compile options: '-MMD -MF /tmp/tmpojmwuff7/file.c.d -c' cc: /tmp/tmpojmwuff7/file.c libraries f77blas,cblas,atlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.4/8.3.0/../../../'] NOT AVAILABLE accelerate_info: NOT AVAILABLE blas_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpev0zd8ov/tmp creating /tmp/tmpev0zd8ov/tmp/tmpev0zd8ov compile options: '-MMD -MF /tmp/tmpev0zd8ov/file.c.d -c' cc: /tmp/tmpev0zd8ov/file.c customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp8mn9pt4q/tmp creating /tmp/tmp8mn9pt4q/tmp/tmp8mn9pt4q compile options: '-MMD -MF /tmp/tmp8mn9pt4q/file.c.d -c' cc: /tmp/tmp8mn9pt4q/file.c C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpu389x9ov/tmp creating /tmp/tmpu389x9ov/tmp/tmpu389x9ov compile options: '-I/usr/include -I/usr/local/include -I/usr/local/include/suitesparse -c' cc: /tmp/tmpu389x9ov/source.c cc /tmp/tmpu389x9ov/tmp/tmpu389x9ov/source.o -L/usr/local/lib -lcblas -o /tmp/tmpu389x9ov/a.out customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpdom45r12/tmp creating /tmp/tmpdom45r12/tmp/tmpdom45r12 compile options: '-MMD -MF /tmp/tmpdom45r12/file.c.d -c' cc: /tmp/tmpdom45r12/file.c FOUND: libraries = ['cblas', 'blas'] library_dirs = ['/usr/local/lib'] include_dirs = ['/usr/include', '/usr/local/include', '/usr/local/include/suitesparse'] language = c define_macros = [('HAVE_CBLAS', None)] FOUND: define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)] libraries = ['cblas', 'blas'] library_dirs = ['/usr/local/lib'] include_dirs = ['/usr/include', '/usr/local/include', '/usr/local/include/suitesparse'] language = c running build running config_cc unifing config_cc, config, build_clib, build_ext, build commands --compiler options running config_fc unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options running build_src build_src building extension "scikits.umfpack.__umfpack" sources creating build creating build/src.dragonfly-5.4-SYNTH-x86_64-3.6 creating build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits creating build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack adding 'scikits/umfpack/umfpack.i' to sources. swig: scikits/umfpack/umfpack.i swig -python -I/usr/local/include/suitesparse -I/usr/local/include/suitesparse -I/usr/local/include/suitesparse -I/usr/include -I/usr/local/include -o build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c -outdir build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack scikits/umfpack/umfpack.i building data_files sources build_src: building npy-pkg config files running build_py creating build/lib.dragonfly-5.4-SYNTH-x86_64-3.6 creating build/lib.dragonfly-5.4-SYNTH-x86_64-3.6/scikits creating build/lib.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack copying scikits/umfpack/__init__.py -> build/lib.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack copying scikits/umfpack/_umfpack.py -> build/lib.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack copying scikits/umfpack/setup.py -> build/lib.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack copying scikits/umfpack/interface.py -> build/lib.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack copying scikits/umfpack/version.py -> build/lib.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack copying scikits/umfpack/umfpack.py -> build/lib.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack copying build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack.py -> build/lib.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack running build_ext customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp0n7qwp_b/tmp creating /tmp/tmp0n7qwp_b/tmp/tmp0n7qwp_b compile options: '-MMD -MF /tmp/tmp0n7qwp_b/file.c.d -c' cc: /tmp/tmp0n7qwp_b/file.c customize UnixCCompiler using build_ext building 'scikits.umfpack.__umfpack' extension compiling C sources C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating build/temp.dragonfly-5.4-SYNTH-x86_64-3.6/build creating build/temp.dragonfly-5.4-SYNTH-x86_64-3.6/build/src.dragonfly-5.4-SYNTH-x86_64-3.6 creating build/temp.dragonfly-5.4-SYNTH-x86_64-3.6/build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits creating build/temp.dragonfly-5.4-SYNTH-x86_64-3.6/build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack compile options: '-DSCIPY_UMFPACK_H -DSCIPY_AMD_H -DNO_ATLAS_INFO=1 -DHAVE_CBLAS -I/usr/local/include/suitesparse -I/usr/include -I/usr/local/include -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c' cc: build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c In file included from /usr/local/lib/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/local/lib/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3028: /usr/local/lib/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_dl_solve': build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3485:52: warning: passing argument 2 of 'umfpack_dl_solve' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_solve(arg1,(long long const (*))arg2,(long long const (*))arg3,(double const (*))arg4,arg5,(double const (*))arg6,arg7,(double const (*))arg8,arg9); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:48, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_solve.h:26:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ap [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3485:78: warning: passing argument 3 of 'umfpack_dl_solve' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_solve(arg1,(long long const (*))arg2,(long long const (*))arg3,(double const (*))arg4,arg5,(double const (*))arg6,arg7,(double const (*))arg8,arg9); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:48, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_solve.h:27:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ai [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_zl_solve': build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3649:52: warning: passing argument 2 of 'umfpack_zl_solve' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_solve(arg1,(long long const (*))arg2,(long long const (*))arg3,(double const (*))arg4,(double const (*))arg5,arg6,arg7,(double const (*))arg8,(double const (*))arg9,arg10,(double const (*))arg11,arg12); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:48, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_solve.h:52:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ap [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3649:78: warning: passing argument 3 of 'umfpack_zl_solve' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_solve(arg1,(long long const (*))arg2,(long long const (*))arg3,(double const (*))arg4,(double const (*))arg5,arg6,arg7,(double const (*))arg8,(double const (*))arg9,arg10,(double const (*))arg11,arg12); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:48, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_solve.h:53:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ai [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_dl_triplet_to_col': build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3921:71: warning: passing argument 4 of 'umfpack_dl_triplet_to_col' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_triplet_to_col(arg1,arg2,arg3,(long long const (*))arg4,(long long const (*))arg5,(double const (*))arg6,arg7,arg8,arg9,arg10); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:58, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_triplet_to_col.h:29:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ti [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3921:97: warning: passing argument 5 of 'umfpack_dl_triplet_to_col' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_triplet_to_col(arg1,arg2,arg3,(long long const (*))arg4,(long long const (*))arg5,(double const (*))arg6,arg7,arg8,arg9,arg10); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:58, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_triplet_to_col.h:30:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Tj [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_zl_triplet_to_col': build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:4153:71: warning: passing argument 4 of 'umfpack_zl_triplet_to_col' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_triplet_to_col(arg1,arg2,arg3,(long long const (*))arg4,(long long const (*))arg5,(double const (*))arg6,(double const (*))arg7,arg8,arg9,arg10,arg11,arg12); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:58, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_triplet_to_col.h:57:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ti [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:4153:97: warning: passing argument 5 of 'umfpack_zl_triplet_to_col' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_triplet_to_col(arg1,arg2,arg3,(long long const (*))arg4,(long long const (*))arg5,(double const (*))arg6,(double const (*))arg7,arg8,arg9,arg10,arg11,arg12); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:58, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_triplet_to_col.h:58:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Tj [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_dl_col_to_triplet': build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:4223:61: warning: passing argument 2 of 'umfpack_dl_col_to_triplet' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_col_to_triplet(arg1,(long long const (*))arg2,arg3); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:59, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_col_to_triplet.h:20:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ap [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_zl_col_to_triplet': build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:4293:61: warning: passing argument 2 of 'umfpack_zl_col_to_triplet' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_col_to_triplet(arg1,(long long const (*))arg2,arg3); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:59, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_col_to_triplet.h:34:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ap [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_dl_transpose': build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:4469:61: warning: passing argument 3 of 'umfpack_dl_transpose' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_transpose(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(long long const (*))arg6,(long long const (*))arg7,arg8,arg9,arg10); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:60, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_transpose.h:28:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ap [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:4469:87: warning: passing argument 4 of 'umfpack_dl_transpose' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_transpose(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(long long const (*))arg6,(long long const (*))arg7,arg8,arg9,arg10); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:60, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_transpose.h:29:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ai [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:4469:136: warning: passing argument 6 of 'umfpack_dl_transpose' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_transpose(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(long long const (*))arg6,(long long const (*))arg7,arg8,arg9,arg10); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:60, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_transpose.h:31:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long P [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:4469:162: warning: passing argument 7 of 'umfpack_dl_transpose' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_transpose(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(long long const (*))arg6,(long long const (*))arg7,arg8,arg9,arg10); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:60, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_transpose.h:32:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Q [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_zl_transpose': build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:4687:61: warning: passing argument 3 of 'umfpack_zl_transpose' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_transpose(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(double const (*))arg6,(long long const (*))arg7,(long long const (*))arg8,arg9,arg10,arg11,arg12,arg13); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:60, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_transpose.h:57:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ap [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:4687:87: warning: passing argument 4 of 'umfpack_zl_transpose' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_transpose(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(double const (*))arg6,(long long const (*))arg7,(long long const (*))arg8,arg9,arg10,arg11,arg12,arg13); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:60, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_transpose.h:58:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ai [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:4687:159: warning: passing argument 7 of 'umfpack_zl_transpose' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_transpose(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(double const (*))arg6,(long long const (*))arg7,(long long const (*))arg8,arg9,arg10,arg11,arg12,arg13); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:60, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_transpose.h:60:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long P [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:4687:185: warning: passing argument 8 of 'umfpack_zl_transpose' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_transpose(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(double const (*))arg6,(long long const (*))arg7,(long long const (*))arg8,arg9,arg10,arg11,arg12,arg13); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:60, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_transpose.h:61:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Q [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_dl_symbolic': build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:5362:60: warning: passing argument 3 of 'umfpack_dl_symbolic' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_symbolic(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,arg6,(double const (*))arg7,arg8); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:46, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_symbolic.h:26:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ap [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:5362:86: warning: passing argument 4 of 'umfpack_dl_symbolic' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_symbolic(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,arg6,(double const (*))arg7,arg8); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:46, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_symbolic.h:27:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ai [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_zl_symbolic': build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:5502:60: warning: passing argument 3 of 'umfpack_zl_symbolic' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_symbolic(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(double const (*))arg6,arg7,(double const (*))arg8,arg9); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:46, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_symbolic.h:50:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ap [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:5502:86: warning: passing argument 4 of 'umfpack_zl_symbolic' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_symbolic(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(double const (*))arg6,arg7,(double const (*))arg8,arg9); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:46, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_symbolic.h:51:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ai [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_dl_numeric': build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:5618:49: warning: passing argument 1 of 'umfpack_dl_numeric' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_numeric((long long const (*))arg1,(long long const (*))arg2,(double const (*))arg3,arg4,arg5,(double const (*))arg6,arg7); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:47, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_numeric.h:23:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ap [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:5618:75: warning: passing argument 2 of 'umfpack_dl_numeric' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_numeric((long long const (*))arg1,(long long const (*))arg2,(double const (*))arg3,arg4,arg5,(double const (*))arg6,arg7); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:47, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_numeric.h:24:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ai [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_zl_numeric': build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:5744:49: warning: passing argument 1 of 'umfpack_zl_numeric' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_numeric((long long const (*))arg1,(long long const (*))arg2,(double const (*))arg3,(double const (*))arg4,arg5,arg6,(double const (*))arg7,arg8); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:47, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_numeric.h:45:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ap [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:5744:75: warning: passing argument 2 of 'umfpack_zl_numeric' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_numeric((long long const (*))arg1,(long long const (*))arg2,(double const (*))arg3,(double const (*))arg4,arg5,arg6,(double const (*))arg7,arg8); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:47, from build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_numeric.h:46:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ai [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.4-SYNTH-x86_64-3.6/build/src.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.o -L/usr/local/lib -L/usr/local/lib -lrt -lumfpack -lamd -lamd -lumfpack -lcblas -lblas -lpython3.6m -o build/lib.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/__umfpack.so /usr/local/lib/python3.6/site-packages/numpy/distutils/system_info.py:638: UserWarning: Atlas (http://math-atlas.sourceforge.net/) libraries not found. Directories to search for the libraries can be specified in the numpy/distutils/site.cfg file (section [atlas]) or by setting the ATLAS environment variable. self.calc_info() -------------------------------------------------------------------------------- -- Phase: run-depends -------------------------------------------------------------------------------- ===> py36-scikit-umfpack-0.3.2_1 depends on package: py36-numpy>0 - found ===> py36-scikit-umfpack-0.3.2_1 depends on package: py36-scipy>0 - found ===> py36-scikit-umfpack-0.3.2_1 depends on package: py36-setuptools>0 - found ===> py36-scikit-umfpack-0.3.2_1 depends on file: /usr/local/bin/python3.6 - found -------------------------------------------------------------------------------- -- Phase: stage -------------------------------------------------------------------------------- ===> Staging for py36-scikit-umfpack-0.3.2_1 ===> Generating temporary packing list umfpack_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpe81k1og6/tmp creating /tmp/tmpe81k1og6/tmp/tmpe81k1og6 compile options: '-MMD -MF /tmp/tmpe81k1og6/file.c.d -c' cc: /tmp/tmpe81k1og6/file.c amd_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp8l1qlvwj/tmp creating /tmp/tmp8l1qlvwj/tmp/tmp8l1qlvwj compile options: '-MMD -MF /tmp/tmp8l1qlvwj/file.c.d -c' cc: /tmp/tmp8l1qlvwj/file.c customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpe7a9x8c1/tmp creating /tmp/tmpe7a9x8c1/tmp/tmpe7a9x8c1 compile options: '-MMD -MF /tmp/tmpe7a9x8c1/file.c.d -c' cc: /tmp/tmpe7a9x8c1/file.c FOUND: libraries = ['amd', 'amd'] library_dirs = ['/usr/local/lib'] include_dirs = ['/usr/local/include/suitesparse'] define_macros = [('SCIPY_AMD_H', None)] swig_opts = ['-I/usr/local/include/suitesparse'] customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpxo9hn2oc/tmp creating /tmp/tmpxo9hn2oc/tmp/tmpxo9hn2oc compile options: '-MMD -MF /tmp/tmpxo9hn2oc/file.c.d -c' cc: /tmp/tmpxo9hn2oc/file.c FOUND: libraries = ['umfpack', 'amd', 'amd', 'umfpack'] library_dirs = ['/usr/local/lib'] include_dirs = ['/usr/local/include/suitesparse'] define_macros = [('SCIPY_UMFPACK_H', None), ('SCIPY_AMD_H', None)] swig_opts = ['-I/usr/local/include/suitesparse', '-I/usr/local/include/suitesparse'] blas_opt_info: blas_mkl_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpmrooa577/tmp creating /tmp/tmpmrooa577/tmp/tmpmrooa577 compile options: '-MMD -MF /tmp/tmpmrooa577/file.c.d -c' cc: /tmp/tmpmrooa577/file.c libraries mkl_rt not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.4/8.3.0/../../../'] NOT AVAILABLE blis_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpmak085yj/tmp creating /tmp/tmpmak085yj/tmp/tmpmak085yj compile options: '-MMD -MF /tmp/tmpmak085yj/file.c.d -c' cc: /tmp/tmpmak085yj/file.c libraries blis not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.4/8.3.0/../../../'] NOT AVAILABLE atlas_3_10_blas_threads_info: Setting PTATLAS=ATLAS customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpzdmv59bh/tmp creating /tmp/tmpzdmv59bh/tmp/tmpzdmv59bh compile options: '-MMD -MF /tmp/tmpzdmv59bh/file.c.d -c' cc: /tmp/tmpzdmv59bh/file.c libraries tatlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.4/8.3.0/../../../'] NOT AVAILABLE atlas_3_10_blas_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpjk421vai/tmp creating /tmp/tmpjk421vai/tmp/tmpjk421vai compile options: '-MMD -MF /tmp/tmpjk421vai/file.c.d -c' cc: /tmp/tmpjk421vai/file.c libraries satlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.4/8.3.0/../../../'] NOT AVAILABLE atlas_blas_threads_info: Setting PTATLAS=ATLAS customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp3e00g5ir/tmp creating /tmp/tmp3e00g5ir/tmp/tmp3e00g5ir compile options: '-MMD -MF /tmp/tmp3e00g5ir/file.c.d -c' cc: /tmp/tmp3e00g5ir/file.c libraries ptf77blas,ptcblas,atlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.4/8.3.0/../../../'] NOT AVAILABLE atlas_blas_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp2xmcljy_/tmp creating /tmp/tmp2xmcljy_/tmp/tmp2xmcljy_ compile options: '-MMD -MF /tmp/tmp2xmcljy_/file.c.d -c' cc: /tmp/tmp2xmcljy_/file.c libraries f77blas,cblas,atlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.4/8.3.0/../../../'] NOT AVAILABLE accelerate_info: NOT AVAILABLE blas_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp68suwnc7/tmp creating /tmp/tmp68suwnc7/tmp/tmp68suwnc7 compile options: '-MMD -MF /tmp/tmp68suwnc7/file.c.d -c' cc: /tmp/tmp68suwnc7/file.c customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp2aa5ky3t/tmp creating /tmp/tmp2aa5ky3t/tmp/tmp2aa5ky3t compile options: '-MMD -MF /tmp/tmp2aa5ky3t/file.c.d -c' cc: /tmp/tmp2aa5ky3t/file.c C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp6_ix0ch4/tmp creating /tmp/tmp6_ix0ch4/tmp/tmp6_ix0ch4 compile options: '-I/usr/include -I/usr/local/include -I/usr/local/include/suitesparse -c' cc: /tmp/tmp6_ix0ch4/source.c cc /tmp/tmp6_ix0ch4/tmp/tmp6_ix0ch4/source.o -L/usr/local/lib -lcblas -o /tmp/tmp6_ix0ch4/a.out customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpthbusaee/tmp creating /tmp/tmpthbusaee/tmp/tmpthbusaee compile options: '-MMD -MF /tmp/tmpthbusaee/file.c.d -c' cc: /tmp/tmpthbusaee/file.c FOUND: libraries = ['cblas', 'blas'] library_dirs = ['/usr/local/lib'] include_dirs = ['/usr/include', '/usr/local/include', '/usr/local/include/suitesparse'] language = c define_macros = [('HAVE_CBLAS', None)] FOUND: define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)] libraries = ['cblas', 'blas'] library_dirs = ['/usr/local/lib'] include_dirs = ['/usr/include', '/usr/local/include', '/usr/local/include/suitesparse'] language = c running install running build running config_cc unifing config_cc, config, build_clib, build_ext, build commands --compiler options running config_fc unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options running build_src build_src building extension "scikits.umfpack.__umfpack" sources adding 'scikits/umfpack/umfpack.i' to sources. building data_files sources build_src: building npy-pkg config files running build_py copying scikits/umfpack/version.py -> build/lib.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack running build_ext customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpju4y5nx8/tmp creating /tmp/tmpju4y5nx8/tmp/tmpju4y5nx8 compile options: '-MMD -MF /tmp/tmpju4y5nx8/file.c.d -c' cc: /tmp/tmpju4y5nx8/file.c customize UnixCCompiler using build_ext running install_lib creating /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6 creating /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages creating /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits creating /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack copying build/lib.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/setup.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack copying build/lib.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/umfpack.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack copying build/lib.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/interface.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack copying build/lib.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack copying build/lib.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/version.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack copying build/lib.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/__init__.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack copying build/lib.dragonfly-5.4-SYNTH-x86_64-3.6/scikits/umfpack/__umfpack.so -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack byte-compiling /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack/setup.py to setup.cpython-36.pyc byte-compiling /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack/umfpack.py to umfpack.cpython-36.pyc byte-compiling /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack/interface.py to interface.cpython-36.pyc byte-compiling /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack/_umfpack.py to _umfpack.cpython-36.pyc byte-compiling /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack/version.py to version.cpython-36.pyc byte-compiling /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack/__init__.py to __init__.cpython-36.pyc writing byte-compilation script '/tmp/tmpuiu6zup0.py' /usr/local/bin/python3.6 /tmp/tmpuiu6zup0.py removing /tmp/tmpuiu6zup0.py running install_data creating /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack/tests copying scikits/umfpack/tests/test_interface.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack/tests/ copying scikits/umfpack/tests/test_umfpack.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack/tests/ copying scikits/umfpack/tests/try_umfpack.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack/tests/ copying scikits/__init__.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits copying MANIFEST.in -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/ running install_clib customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpfppk7r83/tmp creating /tmp/tmpfppk7r83/tmp/tmpfppk7r83 compile options: '-MMD -MF /tmp/tmpfppk7r83/file.c.d -c' cc: /tmp/tmpfppk7r83/file.c running install_egg_info running egg_info creating scikit_umfpack.egg-info writing scikit_umfpack.egg-info/PKG-INFO writing dependency_links to scikit_umfpack.egg-info/dependency_links.txt writing requirements to scikit_umfpack.egg-info/requires.txt writing top-level names to scikit_umfpack.egg-info/top_level.txt writing manifest file 'scikit_umfpack.egg-info/SOURCES.txt' reading manifest file 'scikit_umfpack.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'scikit_umfpack.egg-info/SOURCES.txt' Copying scikit_umfpack.egg-info to /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikit_umfpack-0.3.2-py3.6.egg-info running install_scripts writing list of installed files to '/construction/math/py-scikit-umfpack/.PLIST.pymodtmp' /usr/local/lib/python3.6/site-packages/numpy/distutils/system_info.py:638: UserWarning: Atlas (http://math-atlas.sourceforge.net/) libraries not found. Directories to search for the libraries can be specified in the numpy/distutils/site.cfg file (section [atlas]) or by setting the ATLAS environment variable. self.calc_info() ====> Compressing man pages (compress-man) -------------------------------------------------------------------------------- -- Phase: package -------------------------------------------------------------------------------- ===> Building package for py36-scikit-umfpack-0.3.2_1 file sizes/checksums [33]: . done packing files [33]: . done packing directories [0]: . done -------------------------------------------------- -- Termination -------------------------------------------------- Finished: Tuesday, 9 JUL 2019 at 12:50:53 UTC Duration: 00:01:12