=> Building math/py-scikit-umfpack@py36 Started : Saturday, 21 JUL 2018 at 18:59:10 UTC Platform: 5.3-DEVELOPMENT DragonFly v5.3.0.242.g757c0-DEVELOPMENT #30: Tue May 8 14:06:27 PDT 2018 root@pkgbox64.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 -------------------------------------------------- -- Environment -------------------------------------------------- UNAME_r=5.2-SYNTH UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=DragonFly 5.2-SYNTH UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 TERM=dumb PKG_CACHEDIR=/var/cache/pkg8 PKG_DBDIR=/var/db/pkg8 PORTSDIR=/xports LANG=C HOME=/root USER=root -------------------------------------------------- -- Options -------------------------------------------------- -------------------------------------------------- -- CONFIGURE_ENV -------------------------------------------------- PYTHON="/usr/local/bin/python3.6" XDG_DATA_HOME=/construction/math/py-scikit-umfpack XDG_CONFIG_HOME=/construction/math/py-scikit-umfpack HOME=/construction/math/py-scikit-umfpack TMPDIR="/tmp" PATH=/construction/math/py-scikit-umfpack/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc50 -------------------------------------------------- -- CONFIGURE_ARGS -------------------------------------------------- -------------------------------------------------- -- MAKE_ENV -------------------------------------------------- XDG_DATA_HOME=/construction/math/py-scikit-umfpack XDG_CONFIG_HOME=/construction/math/py-scikit-umfpack HOME=/construction/math/py-scikit-umfpack TMPDIR="/tmp" PATH=/construction/math/py-scikit-umfpack/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc50 LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local LOCALBASE=/usr/local NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS="" LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" -------------------------------------------------- -- MAKE_ARGS -------------------------------------------------- DESTDIR=/construction/math/py-scikit-umfpack/stage -------------------------------------------------- -- PLIST_SUB -------------------------------------------------- PORTDOCS="" PORTEXAMPLES="" PYTHON_INCLUDEDIR=include/python3.6m PYTHON_LIBDIR=lib/python3.6 PYTHON_PLATFORM=dragonfly5 PYTHON_PYOEXTENSION=opt-1.pyc PYTHON_SITELIBDIR=lib/python3.6/site-packages PYTHON_SUFFIX=36 PYTHON_VER=3.6 PYTHON_VERSION=python3.6 PYTHON2="@comment " PYTHON3="" OSREL=5.2 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/scikit-umfpack" EXAMPLESDIR="share/examples/scikit-umfpack" DATADIR="share/scikit-umfpack" WWWDIR="www/scikit-umfpack" ETCDIR="etc/scikit-umfpack" -------------------------------------------------- -- SUB_LIST -------------------------------------------------- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/scikit-umfpack DOCSDIR=/usr/local/share/doc/scikit-umfpack EXAMPLESDIR=/usr/local/share/examples/scikit-umfpack WWWDIR=/usr/local/www/scikit-umfpack ETCDIR=/usr/local/etc/scikit-umfpack -------------------------------------------------- -- /etc/make.conf -------------------------------------------------- SYNTHPROFILE=Release-5.2 USE_PACKAGE_DEPENDS_ONLY=yes PACKAGE_BUILDING=yes BATCH=yes PKG_CREATE_VERBOSE=yes PORTSDIR=/xports DISTDIR=/distfiles WRKDIRPREFIX=/construction PORT_DBDIR=/options PACKAGES=/packages MAKE_JOBS_NUMBER_LIMIT=5 LICENSES_ACCEPTED= NONE HAVE_COMPAT_IA32_KERN= CONFIGURE_MAX_CMD_LEN=262144 _PERL5_FROM_BIN=5.26.1 _ALTCCVERSION_921dbbb2=none _OBJC_ALTCCVERSION_921dbbb2=none _SMP_CPUS=8 UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=500200 OSVERSION=9999999 OSREL=5.2 _OSRELEASE=5.2-SYNTH PYTHONBASE=/usr/local _PKG_CHECKED=1 -------------------------------------------------------------------------------- -- Phase: check-sanity -------------------------------------------------------------------------------- ===> License BSD2CLAUSE accepted by the user -------------------------------------------------------------------------------- -- Phase: pkg-depends -------------------------------------------------------------------------------- ===> py36-scikit-umfpack-0.3.1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.10.5_1.txz Installing pkg-1.10.5_1... Extracting pkg-1.10.5_1: .......... done ===> py36-scikit-umfpack-0.3.1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py36-scikit-umfpack-0.3.1 -------------------------------------------------------------------------------- -- Phase: fetch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: fetch -------------------------------------------------------------------------------- ===> License BSD2CLAUSE accepted by the user ===> Fetching all distfiles required by py36-scikit-umfpack-0.3.1 for building -------------------------------------------------------------------------------- -- Phase: checksum -------------------------------------------------------------------------------- ===> License BSD2CLAUSE accepted by the user ===> Fetching all distfiles required by py36-scikit-umfpack-0.3.1 for building => SHA256 Checksum OK for scikit-umfpack-0.3.1.tar.gz. -------------------------------------------------------------------------------- -- Phase: extract-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: extract -------------------------------------------------------------------------------- ===> License BSD2CLAUSE accepted by the user ===> Fetching all distfiles required by py36-scikit-umfpack-0.3.1 for building ===> Extracting for py36-scikit-umfpack-0.3.1 => SHA256 Checksum OK for scikit-umfpack-0.3.1.tar.gz. -------------------------------------------------------------------------------- -- Phase: patch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: patch -------------------------------------------------------------------------------- ===> Patching for py36-scikit-umfpack-0.3.1 -------------------------------------------------------------------------------- -- Phase: build-depends -------------------------------------------------------------------------------- ===> py36-scikit-umfpack-0.3.1 depends on package: py36-numpy>0 - not found ===> Installing existing package /packages/All/py36-numpy-1.14.3,1.txz Installing py36-numpy-1.14.3,1... `-- Installing gcc5-5.5.0_4... | `-- Installing binutils-2.30_3,1... | | `-- Installing gettext-runtime-0.19.8.1_1... | | `-- Installing indexinfo-0.3.1... | | `-- Extracting indexinfo-0.3.1: .... done | | `-- Extracting gettext-runtime-0.19.8.1_1: .......... done | `-- Extracting binutils-2.30_3,1: .......... done | `-- Installing gmp-6.1.2... | `-- Extracting gmp-6.1.2: .......... done | `-- Installing mpc-1.1.0_1... | | `-- Installing mpfr-4.0.1... | | `-- Extracting mpfr-4.0.1: .......... done | `-- Extracting mpc-1.1.0_1: ......... done `-- Extracting gcc5-5.5.0_4: .......... done `-- Installing openblas-0.2.20_2,1... `-- Extracting openblas-0.2.20_2,1: ......... done `-- Installing py36-setuptools-39.2.0... | `-- Installing python36-3.6.5... | | `-- Installing expat-2.2.5... | | `-- Extracting expat-2.2.5: .......... done | | `-- Installing libffi-3.2.1_2... | | `-- Extracting libffi-3.2.1_2: .......... done | | `-- Installing libressl-2.7.4... | | `-- Extracting libressl-2.7.4: .......... done | | `-- Installing ncurses-6.0.0s20171223_1... | | `-- Extracting ncurses-6.0.0s20171223_1: .......... done | | `-- Installing readline-7.0.3_1... | | `-- Extracting readline-7.0.3_1: .......... done | `-- Extracting python36-3.6.5: .......... done `-- Extracting py36-setuptools-39.2.0: .......... done `-- Installing suitesparse-5.2.0... | `-- Installing lapack-3.5.0_4... | | `-- Installing blas-3.5.0_4... | | `-- Extracting blas-3.5.0_4: ....... done | `-- Extracting lapack-3.5.0_4: .......... done | `-- Installing metis-5.1.0_4... | `-- Extracting metis-5.1.0_4: .......... done `-- Extracting suitesparse-5.2.0: .......... done Extracting py36-numpy-1.14.3,1: .......... done Message from gcc5-5.5.0_4: To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc5 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===> NOTICE: This port is deprecated; you may wish to reconsider installing it: Unsupported by upstream. Use GCC 6 or newer instead.. Message from python36-3.6.5: =========================================================================== Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py36-gdbm databases/py-gdbm@py36 py36-sqlite3 databases/py-sqlite3@py36 py36-tkinter x11-toolkits/py-tkinter@py36 =========================================================================== Message from py36-setuptools-39.2.0: ******************************************************************* Only /usr/local/bin/easy_install-3.6 script has been installed since Python 3.6 is not the default Python version. ******************************************************************* Message from metis-5.1.0_4: ===> NOTICE: The metis port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> py36-scikit-umfpack-0.3.1 depends on package: py36-numpy>0 - found ===> Returning to build of py36-scikit-umfpack-0.3.1 ===> py36-scikit-umfpack-0.3.1 depends on package: py36-scipy>0 - not found ===> Installing existing package /packages/All/py36-scipy-1.1.0.txz Installing py36-scipy-1.1.0... Extracting py36-scipy-1.1.0: .......... done ===> py36-scikit-umfpack-0.3.1 depends on package: py36-scipy>0 - found ===> Returning to build of py36-scikit-umfpack-0.3.1 ===> py36-scikit-umfpack-0.3.1 depends on executable: swig3.0 - not found ===> Installing existing package /packages/All/swig30-3.0.12.txz Installing swig30-3.0.12... `-- Installing lua52-5.2.4... | `-- Installing libedit-3.1.20170329_2,1... | `-- Extracting libedit-3.1.20170329_2,1: .......... done `-- Extracting lua52-5.2.4: ......... done `-- Installing pcre-8.42... `-- Extracting pcre-8.42: .......... done Extracting swig30-3.0.12: .......... done Message from lua52-5.2.4: ===> NOTICE: The lua52 port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> py36-scikit-umfpack-0.3.1 depends on executable: swig3.0 - found ===> Returning to build of py36-scikit-umfpack-0.3.1 ===> py36-scikit-umfpack-0.3.1 depends on executable: cython-3.6 - not found ===> Installing existing package /packages/All/py36-cython-0.28.2.txz Installing py36-cython-0.28.2... Extracting py36-cython-0.28.2: .......... done ===> py36-scikit-umfpack-0.3.1 depends on executable: cython-3.6 - found ===> Returning to build of py36-scikit-umfpack-0.3.1 ===> py36-scikit-umfpack-0.3.1 depends on package: py36-setuptools>0 - found ===> py36-scikit-umfpack-0.3.1 depends on file: /usr/local/bin/python3.6 - found -------------------------------------------------------------------------------- -- Phase: lib-depends -------------------------------------------------------------------------------- ===> py36-scikit-umfpack-0.3.1 depends on shared library: libblas.so - found (/usr/local/lib/libblas.so) ===> py36-scikit-umfpack-0.3.1 depends on shared library: libcblas.so - not found ===> Installing existing package /packages/All/cblas-1.0_8.txz Installing cblas-1.0_8... Extracting cblas-1.0_8: ......... done Message from cblas-1.0_8: ===> NOTICE: The cblas port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> py36-scikit-umfpack-0.3.1 depends on shared library: libcblas.so - found (/usr/local/lib/libcblas.so) ===> Returning to build of py36-scikit-umfpack-0.3.1 ===> py36-scikit-umfpack-0.3.1 depends on shared library: libumfpack.so - found (/usr/local/lib/libumfpack.so) -------------------------------------------------------------------------------- -- Phase: configure -------------------------------------------------------------------------------- ===> Configuring for py36-scikit-umfpack-0.3.1 umfpack_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpx4vhb_nk/tmp creating /tmp/tmpx4vhb_nk/tmp/tmpx4vhb_nk compile options: '-MMD -MF /tmp/tmpx4vhb_nk/file.c.d -c' cc: /tmp/tmpx4vhb_nk/file.c amd_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpjki7rc0q/tmp creating /tmp/tmpjki7rc0q/tmp/tmpjki7rc0q compile options: '-MMD -MF /tmp/tmpjki7rc0q/file.c.d -c' cc: /tmp/tmpjki7rc0q/file.c customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpewbwvjqs/tmp creating /tmp/tmpewbwvjqs/tmp/tmpewbwvjqs compile options: '-MMD -MF /tmp/tmpewbwvjqs/file.c.d -c' cc: /tmp/tmpewbwvjqs/file.c FOUND: libraries = ['amd', 'amd'] library_dirs = ['/usr/local/lib'] include_dirs = ['/usr/local/include/suitesparse'] define_macros = [('SCIPY_AMD_H', None)] swig_opts = ['-I/usr/local/include/suitesparse'] customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpgdfrvnz2/tmp creating /tmp/tmpgdfrvnz2/tmp/tmpgdfrvnz2 compile options: '-MMD -MF /tmp/tmpgdfrvnz2/file.c.d -c' cc: /tmp/tmpgdfrvnz2/file.c FOUND: libraries = ['umfpack', 'amd', 'amd', 'umfpack'] library_dirs = ['/usr/local/lib'] include_dirs = ['/usr/local/include/suitesparse'] define_macros = [('SCIPY_UMFPACK_H', None), ('SCIPY_AMD_H', None)] swig_opts = ['-I/usr/local/include/suitesparse', '-I/usr/local/include/suitesparse'] blas_opt_info: blas_mkl_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpoztz7k9i/tmp creating /tmp/tmpoztz7k9i/tmp/tmpoztz7k9i compile options: '-MMD -MF /tmp/tmpoztz7k9i/file.c.d -c' cc: /tmp/tmpoztz7k9i/file.c libraries mkl_rt not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly5.2/5.5.0/../../../'] NOT AVAILABLE blis_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpb500z667/tmp creating /tmp/tmpb500z667/tmp/tmpb500z667 compile options: '-MMD -MF /tmp/tmpb500z667/file.c.d -c' cc: /tmp/tmpb500z667/file.c libraries blis not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly5.2/5.5.0/../../../'] NOT AVAILABLE atlas_3_10_blas_threads_info: Setting PTATLAS=ATLAS customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpaa7865s_/tmp creating /tmp/tmpaa7865s_/tmp/tmpaa7865s_ compile options: '-MMD -MF /tmp/tmpaa7865s_/file.c.d -c' cc: /tmp/tmpaa7865s_/file.c libraries tatlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly5.2/5.5.0/../../../'] NOT AVAILABLE atlas_3_10_blas_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpblubr_36/tmp creating /tmp/tmpblubr_36/tmp/tmpblubr_36 compile options: '-MMD -MF /tmp/tmpblubr_36/file.c.d -c' cc: /tmp/tmpblubr_36/file.c libraries satlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly5.2/5.5.0/../../../'] NOT AVAILABLE atlas_blas_threads_info: Setting PTATLAS=ATLAS customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp2wa1l8_s/tmp creating /tmp/tmp2wa1l8_s/tmp/tmp2wa1l8_s compile options: '-MMD -MF /tmp/tmp2wa1l8_s/file.c.d -c' cc: /tmp/tmp2wa1l8_s/file.c libraries ptf77blas,ptcblas,atlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly5.2/5.5.0/../../../'] NOT AVAILABLE atlas_blas_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp2big9_qx/tmp creating /tmp/tmp2big9_qx/tmp/tmp2big9_qx compile options: '-MMD -MF /tmp/tmp2big9_qx/file.c.d -c' cc: /tmp/tmp2big9_qx/file.c libraries f77blas,cblas,atlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly5.2/5.5.0/../../../'] NOT AVAILABLE blas_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpuanbm0n7/tmp creating /tmp/tmpuanbm0n7/tmp/tmpuanbm0n7 compile options: '-MMD -MF /tmp/tmpuanbm0n7/file.c.d -c' cc: /tmp/tmpuanbm0n7/file.c customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpy9qfcbou/tmp creating /tmp/tmpy9qfcbou/tmp/tmpy9qfcbou compile options: '-MMD -MF /tmp/tmpy9qfcbou/file.c.d -c' cc: /tmp/tmpy9qfcbou/file.c C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpqiolpt9y/tmp creating /tmp/tmpqiolpt9y/tmp/tmpqiolpt9y compile options: '-I/usr/include -I/usr/local/include -I/usr/local/include/suitesparse -c' cc: /tmp/tmpqiolpt9y/source.c cc /tmp/tmpqiolpt9y/tmp/tmpqiolpt9y/source.o -L/usr/local/lib -lcblas -o /tmp/tmpqiolpt9y/a.out customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpikvsjneb/tmp creating /tmp/tmpikvsjneb/tmp/tmpikvsjneb compile options: '-MMD -MF /tmp/tmpikvsjneb/file.c.d -c' cc: /tmp/tmpikvsjneb/file.c FOUND: libraries = ['cblas', 'blas'] library_dirs = ['/usr/local/lib'] include_dirs = ['/usr/include', '/usr/local/include', '/usr/local/include/suitesparse'] language = c define_macros = [('HAVE_CBLAS', None)] FOUND: define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)] libraries = ['cblas', 'blas'] library_dirs = ['/usr/local/lib'] include_dirs = ['/usr/include', '/usr/local/include', '/usr/local/include/suitesparse'] language = c running config /usr/local/lib/python3.6/site-packages/numpy/distutils/system_info.py:624: UserWarning: Atlas (http://math-atlas.sourceforge.net/) libraries not found. Directories to search for the libraries can be specified in the numpy/distutils/site.cfg file (section [atlas]) or by setting the ATLAS environment variable. self.calc_info() -------------------------------------------------------------------------------- -- Phase: build -------------------------------------------------------------------------------- ===> Building for py36-scikit-umfpack-0.3.1 umfpack_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpikd7bskr/tmp creating /tmp/tmpikd7bskr/tmp/tmpikd7bskr compile options: '-MMD -MF /tmp/tmpikd7bskr/file.c.d -c' cc: /tmp/tmpikd7bskr/file.c amd_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp08hie6jx/tmp creating /tmp/tmp08hie6jx/tmp/tmp08hie6jx compile options: '-MMD -MF /tmp/tmp08hie6jx/file.c.d -c' cc: /tmp/tmp08hie6jx/file.c customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmphc8t8tca/tmp creating /tmp/tmphc8t8tca/tmp/tmphc8t8tca compile options: '-MMD -MF /tmp/tmphc8t8tca/file.c.d -c' cc: /tmp/tmphc8t8tca/file.c FOUND: libraries = ['amd', 'amd'] library_dirs = ['/usr/local/lib'] include_dirs = ['/usr/local/include/suitesparse'] define_macros = [('SCIPY_AMD_H', None)] swig_opts = ['-I/usr/local/include/suitesparse'] customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp_yaxiplp/tmp creating /tmp/tmp_yaxiplp/tmp/tmp_yaxiplp compile options: '-MMD -MF /tmp/tmp_yaxiplp/file.c.d -c' cc: /tmp/tmp_yaxiplp/file.c FOUND: libraries = ['umfpack', 'amd', 'amd', 'umfpack'] library_dirs = ['/usr/local/lib'] include_dirs = ['/usr/local/include/suitesparse'] define_macros = [('SCIPY_UMFPACK_H', None), ('SCIPY_AMD_H', None)] swig_opts = ['-I/usr/local/include/suitesparse', '-I/usr/local/include/suitesparse'] blas_opt_info: blas_mkl_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpcbwc1mza/tmp creating /tmp/tmpcbwc1mza/tmp/tmpcbwc1mza compile options: '-MMD -MF /tmp/tmpcbwc1mza/file.c.d -c' cc: /tmp/tmpcbwc1mza/file.c libraries mkl_rt not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly5.2/5.5.0/../../../'] NOT AVAILABLE blis_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp5uqsjv91/tmp creating /tmp/tmp5uqsjv91/tmp/tmp5uqsjv91 compile options: '-MMD -MF /tmp/tmp5uqsjv91/file.c.d -c' cc: /tmp/tmp5uqsjv91/file.c libraries blis not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly5.2/5.5.0/../../../'] NOT AVAILABLE atlas_3_10_blas_threads_info: Setting PTATLAS=ATLAS customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpeajxrglt/tmp creating /tmp/tmpeajxrglt/tmp/tmpeajxrglt compile options: '-MMD -MF /tmp/tmpeajxrglt/file.c.d -c' cc: /tmp/tmpeajxrglt/file.c libraries tatlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly5.2/5.5.0/../../../'] NOT AVAILABLE atlas_3_10_blas_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpw7od9a28/tmp creating /tmp/tmpw7od9a28/tmp/tmpw7od9a28 compile options: '-MMD -MF /tmp/tmpw7od9a28/file.c.d -c' cc: /tmp/tmpw7od9a28/file.c libraries satlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly5.2/5.5.0/../../../'] NOT AVAILABLE atlas_blas_threads_info: Setting PTATLAS=ATLAS customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp1880jlvt/tmp creating /tmp/tmp1880jlvt/tmp/tmp1880jlvt compile options: '-MMD -MF /tmp/tmp1880jlvt/file.c.d -c' cc: /tmp/tmp1880jlvt/file.c libraries ptf77blas,ptcblas,atlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly5.2/5.5.0/../../../'] NOT AVAILABLE atlas_blas_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpy5tasqeg/tmp creating /tmp/tmpy5tasqeg/tmp/tmpy5tasqeg compile options: '-MMD -MF /tmp/tmpy5tasqeg/file.c.d -c' cc: /tmp/tmpy5tasqeg/file.c libraries f77blas,cblas,atlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly5.2/5.5.0/../../../'] NOT AVAILABLE blas_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpxfj751eg/tmp creating /tmp/tmpxfj751eg/tmp/tmpxfj751eg compile options: '-MMD -MF /tmp/tmpxfj751eg/file.c.d -c' cc: /tmp/tmpxfj751eg/file.c customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp1nme4l44/tmp creating /tmp/tmp1nme4l44/tmp/tmp1nme4l44 compile options: '-MMD -MF /tmp/tmp1nme4l44/file.c.d -c' cc: /tmp/tmp1nme4l44/file.c C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp8kmproi2/tmp creating /tmp/tmp8kmproi2/tmp/tmp8kmproi2 compile options: '-I/usr/include -I/usr/local/include -I/usr/local/include/suitesparse -c' cc: /tmp/tmp8kmproi2/source.c cc /tmp/tmp8kmproi2/tmp/tmp8kmproi2/source.o -L/usr/local/lib -lcblas -o /tmp/tmp8kmproi2/a.out customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmptepand56/tmp creating /tmp/tmptepand56/tmp/tmptepand56 compile options: '-MMD -MF /tmp/tmptepand56/file.c.d -c' cc: /tmp/tmptepand56/file.c FOUND: libraries = ['cblas', 'blas'] library_dirs = ['/usr/local/lib'] include_dirs = ['/usr/include', '/usr/local/include', '/usr/local/include/suitesparse'] language = c define_macros = [('HAVE_CBLAS', None)] FOUND: define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)] libraries = ['cblas', 'blas'] library_dirs = ['/usr/local/lib'] include_dirs = ['/usr/include', '/usr/local/include', '/usr/local/include/suitesparse'] language = c running build running config_cc unifing config_cc, config, build_clib, build_ext, build commands --compiler options running config_fc unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options running build_src build_src building extension "scikits.umfpack.__umfpack" sources creating build creating build/src.dragonfly-5.2-SYNTH-x86_64-3.6 creating build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits creating build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack adding 'scikits/umfpack/umfpack.i' to sources. swig: scikits/umfpack/umfpack.i swig -python -I/usr/local/include/suitesparse -I/usr/local/include/suitesparse -I/usr/local/include/suitesparse -I/usr/include -I/usr/local/include -o build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c -outdir build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack scikits/umfpack/umfpack.i building data_files sources build_src: building npy-pkg config files running build_py creating build/lib.dragonfly-5.2-SYNTH-x86_64-3.6 creating build/lib.dragonfly-5.2-SYNTH-x86_64-3.6/scikits creating build/lib.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack copying scikits/umfpack/version.py -> build/lib.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack copying scikits/umfpack/setup.py -> build/lib.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack copying scikits/umfpack/umfpack.py -> build/lib.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack copying scikits/umfpack/__init__.py -> build/lib.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack copying scikits/umfpack/_umfpack.py -> build/lib.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack copying scikits/umfpack/interface.py -> build/lib.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack copying build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack.py -> build/lib.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack running build_ext customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpql2cn1yy/tmp creating /tmp/tmpql2cn1yy/tmp/tmpql2cn1yy compile options: '-MMD -MF /tmp/tmpql2cn1yy/file.c.d -c' cc: /tmp/tmpql2cn1yy/file.c customize UnixCCompiler using build_ext building 'scikits.umfpack.__umfpack' extension compiling C sources C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating build/temp.dragonfly-5.2-SYNTH-x86_64-3.6/build creating build/temp.dragonfly-5.2-SYNTH-x86_64-3.6/build/src.dragonfly-5.2-SYNTH-x86_64-3.6 creating build/temp.dragonfly-5.2-SYNTH-x86_64-3.6/build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits creating build/temp.dragonfly-5.2-SYNTH-x86_64-3.6/build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack compile options: '-DSCIPY_UMFPACK_H -DSCIPY_AMD_H -DNO_ATLAS_INFO=1 -DHAVE_CBLAS -I/usr/local/include/suitesparse -I/usr/include -I/usr/local/include -I/usr/local/lib/python3.6/site-packages/numpy/core/include -I/usr/local/include/python3.6m -c' cc: build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c In file included from /usr/local/lib/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1816:0, from /usr/local/lib/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/local/lib/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3028: /usr/local/lib/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_dl_solve': build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3485:52: warning: passing argument 2 of 'umfpack_dl_solve' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_solve(arg1,(long long const (*))arg2,(long long const (*))arg3,(double const (*))arg4,arg5,(double const (*))arg6,arg7,(double const (*))arg8,arg9); ^ In file included from /usr/local/include/suitesparse/umfpack.h:48:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_solve.h:23:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_dl_solve ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3485:78: warning: passing argument 3 of 'umfpack_dl_solve' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_solve(arg1,(long long const (*))arg2,(long long const (*))arg3,(double const (*))arg4,arg5,(double const (*))arg6,arg7,(double const (*))arg8,arg9); ^ In file included from /usr/local/include/suitesparse/umfpack.h:48:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_solve.h:23:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_dl_solve ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_zl_solve': build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3649:52: warning: passing argument 2 of 'umfpack_zl_solve' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_solve(arg1,(long long const (*))arg2,(long long const (*))arg3,(double const (*))arg4,(double const (*))arg5,arg6,arg7,(double const (*))arg8,(double const (*))arg9,arg10,(double const (*))arg11,arg12); ^ In file included from /usr/local/include/suitesparse/umfpack.h:48:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_solve.h:49:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_zl_solve ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3649:78: warning: passing argument 3 of 'umfpack_zl_solve' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_solve(arg1,(long long const (*))arg2,(long long const (*))arg3,(double const (*))arg4,(double const (*))arg5,arg6,arg7,(double const (*))arg8,(double const (*))arg9,arg10,(double const (*))arg11,arg12); ^ In file included from /usr/local/include/suitesparse/umfpack.h:48:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_solve.h:49:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_zl_solve ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_dl_triplet_to_col': build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3921:71: warning: passing argument 4 of 'umfpack_dl_triplet_to_col' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_triplet_to_col(arg1,arg2,arg3,(long long const (*))arg4,(long long const (*))arg5,(double const (*))arg6,arg7,arg8,arg9,arg10); ^ In file included from /usr/local/include/suitesparse/umfpack.h:58:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_triplet_to_col.h:24:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_dl_triplet_to_col ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3921:97: warning: passing argument 5 of 'umfpack_dl_triplet_to_col' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_triplet_to_col(arg1,arg2,arg3,(long long const (*))arg4,(long long const (*))arg5,(double const (*))arg6,arg7,arg8,arg9,arg10); ^ In file included from /usr/local/include/suitesparse/umfpack.h:58:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_triplet_to_col.h:24:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_dl_triplet_to_col ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_zl_triplet_to_col': build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:4153:71: warning: passing argument 4 of 'umfpack_zl_triplet_to_col' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_triplet_to_col(arg1,arg2,arg3,(long long const (*))arg4,(long long const (*))arg5,(double const (*))arg6,(double const (*))arg7,arg8,arg9,arg10,arg11,arg12); ^ In file included from /usr/local/include/suitesparse/umfpack.h:58:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_triplet_to_col.h:52:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_zl_triplet_to_col ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:4153:97: warning: passing argument 5 of 'umfpack_zl_triplet_to_col' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_triplet_to_col(arg1,arg2,arg3,(long long const (*))arg4,(long long const (*))arg5,(double const (*))arg6,(double const (*))arg7,arg8,arg9,arg10,arg11,arg12); ^ In file included from /usr/local/include/suitesparse/umfpack.h:58:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_triplet_to_col.h:52:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_zl_triplet_to_col ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_dl_col_to_triplet': build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:4223:61: warning: passing argument 2 of 'umfpack_dl_col_to_triplet' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_col_to_triplet(arg1,(long long const (*))arg2,arg3); ^ In file included from /usr/local/include/suitesparse/umfpack.h:59:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_col_to_triplet.h:17:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_dl_col_to_triplet ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_zl_col_to_triplet': build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:4293:61: warning: passing argument 2 of 'umfpack_zl_col_to_triplet' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_col_to_triplet(arg1,(long long const (*))arg2,arg3); ^ In file included from /usr/local/include/suitesparse/umfpack.h:59:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_col_to_triplet.h:31:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_zl_col_to_triplet ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_dl_transpose': build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:4469:61: warning: passing argument 3 of 'umfpack_dl_transpose' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_transpose(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(long long const (*))arg6,(long long const (*))arg7,arg8,arg9,arg10); ^ In file included from /usr/local/include/suitesparse/umfpack.h:60:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_transpose.h:24:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_dl_transpose ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:4469:87: warning: passing argument 4 of 'umfpack_dl_transpose' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_transpose(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(long long const (*))arg6,(long long const (*))arg7,arg8,arg9,arg10); ^ In file included from /usr/local/include/suitesparse/umfpack.h:60:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_transpose.h:24:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_dl_transpose ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:4469:136: warning: passing argument 6 of 'umfpack_dl_transpose' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_transpose(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(long long const (*))arg6,(long long const (*))arg7,arg8,arg9,arg10); ^ In file included from /usr/local/include/suitesparse/umfpack.h:60:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_transpose.h:24:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_dl_transpose ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:4469:162: warning: passing argument 7 of 'umfpack_dl_transpose' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_transpose(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(long long const (*))arg6,(long long const (*))arg7,arg8,arg9,arg10); ^ In file included from /usr/local/include/suitesparse/umfpack.h:60:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_transpose.h:24:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_dl_transpose ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_zl_transpose': build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:4687:61: warning: passing argument 3 of 'umfpack_zl_transpose' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_transpose(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(double const (*))arg6,(long long const (*))arg7,(long long const (*))arg8,arg9,arg10,arg11,arg12,arg13); ^ In file included from /usr/local/include/suitesparse/umfpack.h:60:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_transpose.h:53:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_zl_transpose ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:4687:87: warning: passing argument 4 of 'umfpack_zl_transpose' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_transpose(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(double const (*))arg6,(long long const (*))arg7,(long long const (*))arg8,arg9,arg10,arg11,arg12,arg13); ^ In file included from /usr/local/include/suitesparse/umfpack.h:60:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_transpose.h:53:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_zl_transpose ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:4687:159: warning: passing argument 7 of 'umfpack_zl_transpose' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_transpose(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(double const (*))arg6,(long long const (*))arg7,(long long const (*))arg8,arg9,arg10,arg11,arg12,arg13); ^ In file included from /usr/local/include/suitesparse/umfpack.h:60:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_transpose.h:53:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_zl_transpose ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:4687:185: warning: passing argument 8 of 'umfpack_zl_transpose' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_transpose(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(double const (*))arg6,(long long const (*))arg7,(long long const (*))arg8,arg9,arg10,arg11,arg12,arg13); ^ In file included from /usr/local/include/suitesparse/umfpack.h:60:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_transpose.h:53:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_zl_transpose ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_dl_symbolic': build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:5362:60: warning: passing argument 3 of 'umfpack_dl_symbolic' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_symbolic(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,arg6,(double const (*))arg7,arg8); ^ In file included from /usr/local/include/suitesparse/umfpack.h:46:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_symbolic.h:22:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_dl_symbolic ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:5362:86: warning: passing argument 4 of 'umfpack_dl_symbolic' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_symbolic(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,arg6,(double const (*))arg7,arg8); ^ In file included from /usr/local/include/suitesparse/umfpack.h:46:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_symbolic.h:22:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_dl_symbolic ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_zl_symbolic': build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:5502:60: warning: passing argument 3 of 'umfpack_zl_symbolic' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_symbolic(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(double const (*))arg6,arg7,(double const (*))arg8,arg9); ^ In file included from /usr/local/include/suitesparse/umfpack.h:46:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_symbolic.h:46:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_zl_symbolic ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:5502:86: warning: passing argument 4 of 'umfpack_zl_symbolic' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_symbolic(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(double const (*))arg6,arg7,(double const (*))arg8,arg9); ^ In file included from /usr/local/include/suitesparse/umfpack.h:46:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_symbolic.h:46:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_zl_symbolic ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_dl_numeric': build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:5618:49: warning: passing argument 1 of 'umfpack_dl_numeric' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_numeric((long long const (*))arg1,(long long const (*))arg2,(double const (*))arg3,arg4,arg5,(double const (*))arg6,arg7); ^ In file included from /usr/local/include/suitesparse/umfpack.h:47:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_numeric.h:21:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_dl_numeric ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:5618:75: warning: passing argument 2 of 'umfpack_dl_numeric' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_numeric((long long const (*))arg1,(long long const (*))arg2,(double const (*))arg3,arg4,arg5,(double const (*))arg6,arg7); ^ In file included from /usr/local/include/suitesparse/umfpack.h:47:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_numeric.h:21:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_dl_numeric ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_zl_numeric': build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:5744:49: warning: passing argument 1 of 'umfpack_zl_numeric' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_numeric((long long const (*))arg1,(long long const (*))arg2,(double const (*))arg3,(double const (*))arg4,arg5,arg6,(double const (*))arg7,arg8); ^ In file included from /usr/local/include/suitesparse/umfpack.h:47:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_numeric.h:43:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_zl_numeric ^ build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:5744:75: warning: passing argument 2 of 'umfpack_zl_numeric' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_numeric((long long const (*))arg1,(long long const (*))arg2,(double const (*))arg3,(double const (*))arg4,arg5,arg6,(double const (*))arg7,arg8); ^ In file included from /usr/local/include/suitesparse/umfpack.h:47:0, from build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.c:3027: /usr/local/include/suitesparse/umfpack_numeric.h:43:18: note: expected 'const long int *' but argument is of type 'const long long int *' SuiteSparse_long umfpack_zl_numeric ^ cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.2-SYNTH-x86_64-3.6/build/src.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack_wrap.o -L/usr/local/lib -L/usr/local/lib -lrt -lumfpack -lamd -lamd -lumfpack -lcblas -lblas -lpython3.6m -o build/lib.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/__umfpack.so /usr/local/lib/python3.6/site-packages/numpy/distutils/system_info.py:624: UserWarning: Atlas (http://math-atlas.sourceforge.net/) libraries not found. Directories to search for the libraries can be specified in the numpy/distutils/site.cfg file (section [atlas]) or by setting the ATLAS environment variable. self.calc_info() -------------------------------------------------------------------------------- -- Phase: run-depends -------------------------------------------------------------------------------- ===> py36-scikit-umfpack-0.3.1 depends on package: py36-numpy>0 - found ===> py36-scikit-umfpack-0.3.1 depends on package: py36-scipy>0 - found ===> py36-scikit-umfpack-0.3.1 depends on package: py36-setuptools>0 - found ===> py36-scikit-umfpack-0.3.1 depends on file: /usr/local/bin/python3.6 - found -------------------------------------------------------------------------------- -- Phase: stage -------------------------------------------------------------------------------- ===> Staging for py36-scikit-umfpack-0.3.1 ===> Generating temporary packing list umfpack_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp3nql3ijh/tmp creating /tmp/tmp3nql3ijh/tmp/tmp3nql3ijh compile options: '-MMD -MF /tmp/tmp3nql3ijh/file.c.d -c' cc: /tmp/tmp3nql3ijh/file.c amd_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp6el43smx/tmp creating /tmp/tmp6el43smx/tmp/tmp6el43smx compile options: '-MMD -MF /tmp/tmp6el43smx/file.c.d -c' cc: /tmp/tmp6el43smx/file.c customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpx25iv7he/tmp creating /tmp/tmpx25iv7he/tmp/tmpx25iv7he compile options: '-MMD -MF /tmp/tmpx25iv7he/file.c.d -c' cc: /tmp/tmpx25iv7he/file.c FOUND: libraries = ['amd', 'amd'] library_dirs = ['/usr/local/lib'] include_dirs = ['/usr/local/include/suitesparse'] define_macros = [('SCIPY_AMD_H', None)] swig_opts = ['-I/usr/local/include/suitesparse'] customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpdgv2_zw1/tmp creating /tmp/tmpdgv2_zw1/tmp/tmpdgv2_zw1 compile options: '-MMD -MF /tmp/tmpdgv2_zw1/file.c.d -c' cc: /tmp/tmpdgv2_zw1/file.c FOUND: libraries = ['umfpack', 'amd', 'amd', 'umfpack'] library_dirs = ['/usr/local/lib'] include_dirs = ['/usr/local/include/suitesparse'] define_macros = [('SCIPY_UMFPACK_H', None), ('SCIPY_AMD_H', None)] swig_opts = ['-I/usr/local/include/suitesparse', '-I/usr/local/include/suitesparse'] blas_opt_info: blas_mkl_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpoohp0enj/tmp creating /tmp/tmpoohp0enj/tmp/tmpoohp0enj compile options: '-MMD -MF /tmp/tmpoohp0enj/file.c.d -c' cc: /tmp/tmpoohp0enj/file.c libraries mkl_rt not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly5.2/5.5.0/../../../'] NOT AVAILABLE blis_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmps9gk11jl/tmp creating /tmp/tmps9gk11jl/tmp/tmps9gk11jl compile options: '-MMD -MF /tmp/tmps9gk11jl/file.c.d -c' cc: /tmp/tmps9gk11jl/file.c libraries blis not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly5.2/5.5.0/../../../'] NOT AVAILABLE atlas_3_10_blas_threads_info: Setting PTATLAS=ATLAS customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp6l9_abyz/tmp creating /tmp/tmp6l9_abyz/tmp/tmp6l9_abyz compile options: '-MMD -MF /tmp/tmp6l9_abyz/file.c.d -c' cc: /tmp/tmp6l9_abyz/file.c libraries tatlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly5.2/5.5.0/../../../'] NOT AVAILABLE atlas_3_10_blas_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpreqxaflu/tmp creating /tmp/tmpreqxaflu/tmp/tmpreqxaflu compile options: '-MMD -MF /tmp/tmpreqxaflu/file.c.d -c' cc: /tmp/tmpreqxaflu/file.c libraries satlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly5.2/5.5.0/../../../'] NOT AVAILABLE atlas_blas_threads_info: Setting PTATLAS=ATLAS customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpq1j1jfx0/tmp creating /tmp/tmpq1j1jfx0/tmp/tmpq1j1jfx0 compile options: '-MMD -MF /tmp/tmpq1j1jfx0/file.c.d -c' cc: /tmp/tmpq1j1jfx0/file.c libraries ptf77blas,ptcblas,atlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly5.2/5.5.0/../../../'] NOT AVAILABLE atlas_blas_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp3ts0oo1b/tmp creating /tmp/tmp3ts0oo1b/tmp/tmp3ts0oo1b compile options: '-MMD -MF /tmp/tmp3ts0oo1b/file.c.d -c' cc: /tmp/tmp3ts0oo1b/file.c libraries f77blas,cblas,atlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly5.2/5.5.0/../../../'] NOT AVAILABLE blas_info: customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpnucmc34r/tmp creating /tmp/tmpnucmc34r/tmp/tmpnucmc34r compile options: '-MMD -MF /tmp/tmpnucmc34r/file.c.d -c' cc: /tmp/tmpnucmc34r/file.c customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpjkeacw3u/tmp creating /tmp/tmpjkeacw3u/tmp/tmpjkeacw3u compile options: '-MMD -MF /tmp/tmpjkeacw3u/file.c.d -c' cc: /tmp/tmpjkeacw3u/file.c C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp98y4sd58/tmp creating /tmp/tmp98y4sd58/tmp/tmp98y4sd58 compile options: '-I/usr/include -I/usr/local/include -I/usr/local/include/suitesparse -c' cc: /tmp/tmp98y4sd58/source.c cc /tmp/tmp98y4sd58/tmp/tmp98y4sd58/source.o -L/usr/local/lib -lcblas -o /tmp/tmp98y4sd58/a.out customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp9sj9ykp7/tmp creating /tmp/tmp9sj9ykp7/tmp/tmp9sj9ykp7 compile options: '-MMD -MF /tmp/tmp9sj9ykp7/file.c.d -c' cc: /tmp/tmp9sj9ykp7/file.c FOUND: libraries = ['cblas', 'blas'] library_dirs = ['/usr/local/lib'] include_dirs = ['/usr/include', '/usr/local/include', '/usr/local/include/suitesparse'] language = c define_macros = [('HAVE_CBLAS', None)] FOUND: define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)] libraries = ['cblas', 'blas'] library_dirs = ['/usr/local/lib'] include_dirs = ['/usr/include', '/usr/local/include', '/usr/local/include/suitesparse'] language = c running install running build running config_cc unifing config_cc, config, build_clib, build_ext, build commands --compiler options running config_fc unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options running build_src build_src building extension "scikits.umfpack.__umfpack" sources adding 'scikits/umfpack/umfpack.i' to sources. building data_files sources build_src: building npy-pkg config files running build_py copying scikits/umfpack/version.py -> build/lib.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack running build_ext customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp7zlb8i9j/tmp creating /tmp/tmp7zlb8i9j/tmp/tmp7zlb8i9j compile options: '-MMD -MF /tmp/tmp7zlb8i9j/file.c.d -c' cc: /tmp/tmp7zlb8i9j/file.c customize UnixCCompiler using build_ext running install_lib creating /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6 creating /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages creating /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits creating /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack copying build/lib.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/__umfpack.so -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack copying build/lib.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/interface.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack copying build/lib.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/version.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack copying build/lib.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/umfpack.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack copying build/lib.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/__init__.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack copying build/lib.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/_umfpack.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack copying build/lib.dragonfly-5.2-SYNTH-x86_64-3.6/scikits/umfpack/setup.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack byte-compiling /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack/interface.py to interface.cpython-36.pyc byte-compiling /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack/version.py to version.cpython-36.pyc byte-compiling /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack/umfpack.py to umfpack.cpython-36.pyc byte-compiling /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack/__init__.py to __init__.cpython-36.pyc byte-compiling /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack/_umfpack.py to _umfpack.cpython-36.pyc byte-compiling /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack/setup.py to setup.cpython-36.pyc writing byte-compilation script '/tmp/tmpfl17chcu.py' /usr/local/bin/python3.6 /tmp/tmpfl17chcu.py removing /tmp/tmpfl17chcu.py running install_data creating /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack/tests copying scikits/umfpack/tests/test_umfpack.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack/tests/ copying scikits/umfpack/tests/test_interface.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack/tests/ copying scikits/umfpack/tests/try_umfpack.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits/umfpack/tests/ copying scikits/__init__.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikits copying MANIFEST.in -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/ running install_clib customize UnixCCompiler C compiler: cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp1pt54d4g/tmp creating /tmp/tmp1pt54d4g/tmp/tmp1pt54d4g compile options: '-MMD -MF /tmp/tmp1pt54d4g/file.c.d -c' cc: /tmp/tmp1pt54d4g/file.c running install_egg_info running egg_info creating scikit_umfpack.egg-info writing scikit_umfpack.egg-info/PKG-INFO writing dependency_links to scikit_umfpack.egg-info/dependency_links.txt writing requirements to scikit_umfpack.egg-info/requires.txt writing top-level names to scikit_umfpack.egg-info/top_level.txt writing manifest file 'scikit_umfpack.egg-info/SOURCES.txt' reading manifest file 'scikit_umfpack.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'scikit_umfpack.egg-info/SOURCES.txt' Copying scikit_umfpack.egg-info to /construction/math/py-scikit-umfpack/stage/usr/local/lib/python3.6/site-packages/scikit_umfpack-0.3.1-py3.6.egg-info running install_scripts writing list of installed files to '/construction/math/py-scikit-umfpack/.PLIST.pymodtmp' /usr/local/lib/python3.6/site-packages/numpy/distutils/system_info.py:624: UserWarning: Atlas (http://math-atlas.sourceforge.net/) libraries not found. Directories to search for the libraries can be specified in the numpy/distutils/site.cfg file (section [atlas]) or by setting the ATLAS environment variable. self.calc_info() ====> Compressing man pages (compress-man) -------------------------------------------------------------------------------- -- Phase: package -------------------------------------------------------------------------------- ===> Building package for py36-scikit-umfpack-0.3.1 file sizes/checksums [33]: . done packing files [33]: . done packing directories [0]: . done -------------------------------------------------- -- Termination -------------------------------------------------- Finished: Saturday, 21 JUL 2018 at 19:00:16 UTC Duration: 00:01:06