=> Building biology/rainbow Started : Wednesday, 11 APR 2018 at 02:47:51 UTC Platform: 5.3-DEVELOPMENT DragonFly v5.3.0.81.g32506c-DEVELOPMENT #29: Tue Apr 10 08:49:52 PDT 2018 marino@pkgbox64.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 -------------------------------------------------- -- Environment -------------------------------------------------- UNAME_r=5.2-SYNTH UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=DragonFly 5.2-SYNTH UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 TERM=dumb PKG_CACHEDIR=/var/cache/pkg8 PKG_DBDIR=/var/db/pkg8 PORTSDIR=/xports LANG=C HOME=/root USER=root -------------------------------------------------- -- Options -------------------------------------------------- -------------------------------------------------- -- CONFIGURE_ENV -------------------------------------------------- MAKE=gmake XDG_DATA_HOME=/construction/biology/rainbow XDG_CONFIG_HOME=/construction/biology/rainbow HOME=/construction/biology/rainbow TMPDIR="/tmp" PATH=/construction/biology/rainbow/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc50 -------------------------------------------------- -- CONFIGURE_ARGS -------------------------------------------------- -------------------------------------------------- -- MAKE_ENV -------------------------------------------------- XDG_DATA_HOME=/construction/biology/rainbow XDG_CONFIG_HOME=/construction/biology/rainbow HOME=/construction/biology/rainbow TMPDIR="/tmp" PATH=/construction/biology/rainbow/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc50 PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS="" LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" -------------------------------------------------- -- MAKE_ARGS -------------------------------------------------- DESTDIR=/construction/biology/rainbow/stage -------------------------------------------------- -- PLIST_SUB -------------------------------------------------- PORTDOCS="" PORTEXAMPLES="" OSREL=5.2 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/rainbow" EXAMPLESDIR="share/examples/rainbow" DATADIR="share/rainbow" WWWDIR="www/rainbow" ETCDIR="etc/rainbow" -------------------------------------------------- -- SUB_LIST -------------------------------------------------- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/rainbow DOCSDIR=/usr/local/share/doc/rainbow EXAMPLESDIR=/usr/local/share/examples/rainbow WWWDIR=/usr/local/www/rainbow ETCDIR=/usr/local/etc/rainbow -------------------------------------------------- -- /etc/make.conf -------------------------------------------------- SYNTHPROFILE=Release-5.2 USE_PACKAGE_DEPENDS_ONLY=yes PACKAGE_BUILDING=yes BATCH=yes PKG_CREATE_VERBOSE=yes PORTSDIR=/xports DISTDIR=/distfiles WRKDIRPREFIX=/construction PORT_DBDIR=/options PACKAGES=/packages MAKE_JOBS_NUMBER_LIMIT=5 LICENSES_ACCEPTED= NONE HAVE_COMPAT_IA32_KERN= CONFIGURE_MAX_CMD_LEN=262144 _SMP_CPUS=8 UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=500200 OSVERSION=9999999 OSREL=5.2 _OSRELEASE=5.2-SYNTH -------------------------------------------------------------------------------- -- Phase: check-sanity -------------------------------------------------------------------------------- ===> License GPLv3+ accepted by the user -------------------------------------------------------------------------------- -- Phase: pkg-depends -------------------------------------------------------------------------------- ===> rainbow-2.0.4 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.10.5.txz Installing pkg-1.10.5... Extracting pkg-1.10.5: .......... done ===> rainbow-2.0.4 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of rainbow-2.0.4 -------------------------------------------------------------------------------- -- Phase: fetch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: fetch -------------------------------------------------------------------------------- ===> License GPLv3+ accepted by the user => rainbow_2.0.4.tar.gz doesn't seem to exist in /distfiles/. => Attempting to fetch https://downloads.sourceforge.net/project/bio-rainbow/rainbow_2.0.4.tar.gz rainbow_2.0.4.tar.gz 75 kB 0 Bps ===> Fetching all distfiles required by rainbow-2.0.4 for building -------------------------------------------------------------------------------- -- Phase: checksum -------------------------------------------------------------------------------- ===> License GPLv3+ accepted by the user ===> Fetching all distfiles required by rainbow-2.0.4 for building => SHA256 Checksum OK for rainbow_2.0.4.tar.gz. -------------------------------------------------------------------------------- -- Phase: extract-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: extract -------------------------------------------------------------------------------- ===> License GPLv3+ accepted by the user ===> Fetching all distfiles required by rainbow-2.0.4 for building ===> Extracting for rainbow-2.0.4 => SHA256 Checksum OK for rainbow_2.0.4.tar.gz. -------------------------------------------------------------------------------- -- Phase: patch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: patch -------------------------------------------------------------------------------- ===> Patching for rainbow-2.0.4 ===> Applying ports patches for rainbow-2.0.4 -------------------------------------------------------------------------------- -- Phase: build-depends -------------------------------------------------------------------------------- ===> rainbow-2.0.4 depends on executable: gmake - not found ===> Installing existing package /packages/All/gmake-4.2.1_2.txz Installing gmake-4.2.1_2... `-- Installing gettext-runtime-0.19.8.1_1... | `-- Installing indexinfo-0.3.1... | `-- Extracting indexinfo-0.3.1: .... done `-- Extracting gettext-runtime-0.19.8.1_1: .......... done Extracting gmake-4.2.1_2: .......... done ===> rainbow-2.0.4 depends on executable: gmake - found ===> Returning to build of rainbow-2.0.4 -------------------------------------------------------------------------------- -- Phase: lib-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: configure -------------------------------------------------------------------------------- ===> Configuring for rainbow-2.0.4 -------------------------------------------------------------------------------- -- Phase: build -------------------------------------------------------------------------------- ===> Building for rainbow-2.0.4 gmake[1]: Entering directory '/construction/biology/rainbow/rainbow_2.0.4' cc -c -pipe -O2 -fno-strict-aliasing -D_FILE_OFFSET_BITS=64 main.c -o main.o cc -c -pipe -O2 -fno-strict-aliasing -D_FILE_OFFSET_BITS=64 divide.c -o divide.o cc -c -pipe -O2 -fno-strict-aliasing -D_FILE_OFFSET_BITS=64 file_reader.c -o file_reader.o cc -c -pipe -O2 -fno-strict-aliasing -D_FILE_OFFSET_BITS=64 asm_R2.c -o asm_R2.o cc -c -pipe -O2 -fno-strict-aliasing -D_FILE_OFFSET_BITS=64 mergectg.c -o mergectg.o cc -c -pipe -O2 -fno-strict-aliasing -D_FILE_OFFSET_BITS=64 cluster.c -o cluster.o cc -c -pipe -O2 -fno-strict-aliasing -D_FILE_OFFSET_BITS=64 ezmsim.c -o ezmsim.o cc -c -pipe -O2 -fno-strict-aliasing -D_FILE_OFFSET_BITS=64 rbasm_main.c -o rbasm_main.o cc -pipe -O2 -fno-strict-aliasing -o rbasm asm_R2.o rbasm_main.o file_reader.o -lm cc -pipe -O2 -fno-strict-aliasing -o rainbow main.o divide.o file_reader.o asm_R2.o mergectg.o cluster.o -lm cc -pipe -O2 -fno-strict-aliasing -o ezmsim ezmsim.o -lm gmake[1]: Leaving directory '/construction/biology/rainbow/rainbow_2.0.4' -------------------------------------------------------------------------------- -- Phase: run-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: stage -------------------------------------------------------------------------------- ===> Staging for rainbow-2.0.4 ===> Generating temporary packing list install -s -m 555 /construction/biology/rainbow/rainbow_2.0.4/rainbow /construction/biology/rainbow/rainbow_2.0.4/ezmsim /construction/biology/rainbow/rainbow_2.0.4/rbasm /construction/biology/rainbow/stage/usr/local/bin ====> Compressing man pages (compress-man) -------------------------------------------------------------------------------- -- Phase: package -------------------------------------------------------------------------------- ===> Building package for rainbow-2.0.4 file sizes/checksums [6]: . done packing files [6]: . done packing directories [0]: . done -------------------------------------------------- -- Termination -------------------------------------------------- Finished: Wednesday, 11 APR 2018 at 02:47:59 UTC Duration: 00:00:07