=> Building science/pynn Started : Wednesday, 22 NOV 2017 at 07:22:51 UTC Platform: 5.1-DEVELOPMENT DragonFly v5.1.0.211.g5913f-DEVELOPMENT #23: Mon Nov 6 09:10:01 PST 2017 root@pkgbox64.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 -------------------------------------------------- -- Environment -------------------------------------------------- UNAME_r=5.0-SYNTH UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=DragonFly 5.0-SYNTH UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 TERM=dumb PKG_CACHEDIR=/var/cache/pkg8 PKG_DBDIR=/var/db/pkg8 PORTSDIR=/xports LANG=C HOME=/root USER=root -------------------------------------------------- -- Options -------------------------------------------------- -------------------------------------------------- -- CONFIGURE_ENV -------------------------------------------------- PYTHON="/usr/local/bin/python2.7" XDG_DATA_HOME=/construction/science/pynn XDG_CONFIG_HOME=/construction/science/pynn HOME=/construction/science/pynn TMPDIR="/tmp" PATH=/construction/science/pynn/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc50 -------------------------------------------------- -- CONFIGURE_ARGS -------------------------------------------------- -------------------------------------------------- -- MAKE_ENV -------------------------------------------------- XDG_DATA_HOME=/construction/science/pynn XDG_CONFIG_HOME=/construction/science/pynn HOME=/construction/science/pynn TMPDIR="/tmp" PATH=/construction/science/pynn/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc50 LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS="" LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" -------------------------------------------------- -- MAKE_ARGS -------------------------------------------------- DESTDIR=/construction/science/pynn/stage -------------------------------------------------- -- PLIST_SUB -------------------------------------------------- PYTHON_INCLUDEDIR=include/python2.7 PYTHON_LIBDIR=lib/python2.7 PYTHON_PLATFORM=dragonfly5 PYTHON_PYOEXTENSION=pyo PYTHON_SITELIBDIR=lib/python2.7/site-packages PYTHON_SUFFIX=27 PYTHON_VER=2.7 PYTHON_VERSION=python2.7 PYTHON2="" PYTHON3="@comment " OSREL=5.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local PORTDOCS="" PORTEXAMPLES="" LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/pynn" EXAMPLESDIR="share/examples/pynn" DATADIR="share/pynn" WWWDIR="www/pynn" ETCDIR="etc/pynn" -------------------------------------------------- -- SUB_LIST -------------------------------------------------- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/pynn DOCSDIR=/usr/local/share/doc/pynn EXAMPLESDIR=/usr/local/share/examples/pynn WWWDIR=/usr/local/www/pynn ETCDIR=/usr/local/etc/pynn -------------------------------------------------- -- /etc/make.conf -------------------------------------------------- SYNTHPROFILE=Release-5.0 USE_PACKAGE_DEPENDS_ONLY=yes PACKAGE_BUILDING=yes BATCH=yes PKG_CREATE_VERBOSE=yes PORTSDIR=/xports DISTDIR=/distfiles WRKDIRPREFIX=/construction PORT_DBDIR=/options PACKAGES=/packages MAKE_JOBS_NUMBER_LIMIT=5 HAVE_COMPAT_IA32_KERN= CONFIGURE_MAX_CMD_LEN=262144 _SMP_CPUS=8 UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=500000 OSVERSION=9999999 OSREL=5.0 _OSRELEASE=5.0-SYNTH -------------------------------------------------------------------------------- -- Phase: check-sanity -------------------------------------------------------------------------------- ===> NOTICE: The pynn port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License CeCILL accepted by the user -------------------------------------------------------------------------------- -- Phase: pkg-depends -------------------------------------------------------------------------------- ===> py27-pynn-0.9.1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.10.2.txz Installing pkg-1.10.2... Extracting pkg-1.10.2: .......... done ===> py27-pynn-0.9.1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py27-pynn-0.9.1 -------------------------------------------------------------------------------- -- Phase: fetch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: fetch -------------------------------------------------------------------------------- ===> NOTICE: The pynn port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License CeCILL accepted by the user ===> Fetching all distfiles required by py27-pynn-0.9.1 for building -------------------------------------------------------------------------------- -- Phase: checksum -------------------------------------------------------------------------------- ===> NOTICE: The pynn port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License CeCILL accepted by the user ===> Fetching all distfiles required by py27-pynn-0.9.1 for building => SHA256 Checksum OK for PyNN-0.9.1.tar.gz. -------------------------------------------------------------------------------- -- Phase: extract-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: extract -------------------------------------------------------------------------------- ===> NOTICE: The pynn port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License CeCILL accepted by the user ===> Fetching all distfiles required by py27-pynn-0.9.1 for building ===> Extracting for py27-pynn-0.9.1 => SHA256 Checksum OK for PyNN-0.9.1.tar.gz. -------------------------------------------------------------------------------- -- Phase: patch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: patch -------------------------------------------------------------------------------- ===> Patching for py27-pynn-0.9.1 -------------------------------------------------------------------------------- -- Phase: build-depends -------------------------------------------------------------------------------- ===> py27-pynn-0.9.1 depends on file: /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py - not found ===> Installing existing package /packages/All/py27-numpy-1.13.3,1.txz Installing py27-numpy-1.13.3,1... `-- Installing blas-3.5.0_3... | `-- Installing gcc5-5.5.0... | | `-- Installing binutils-2.28,1... | | `-- Installing gettext-runtime-0.19.8.1_1... | | | `-- Installing indexinfo-0.3.1... | | | `-- Extracting indexinfo-0.3.1: .... done | | `-- Extracting gettext-runtime-0.19.8.1_1: .......... done | | `-- Extracting binutils-2.28,1: .......... done | | `-- Installing gmp-6.1.2... | | `-- Extracting gmp-6.1.2: .......... done | | `-- Installing mpc-1.0.3... | | `-- Installing mpfr-3.1.6... | | `-- Extracting mpfr-3.1.6: .......... done | | `-- Extracting mpc-1.0.3: ...... done | `-- Extracting gcc5-5.5.0: .......... done `-- Extracting blas-3.5.0_3: ....... done `-- Installing cblas-1.0_7... `-- Extracting cblas-1.0_7: ......... done `-- Installing lapack-3.5.0_3... `-- Extracting lapack-3.5.0_3: .......... done `-- Installing py27-setuptools-36.5.0... | `-- Installing python27-2.7.14_1... | | `-- Installing expat-2.2.1... | | `-- Extracting expat-2.2.1: .......... done | | `-- Installing libffi-3.2.1_1... | | `-- Extracting libffi-3.2.1_1: .......... done | | `-- Installing libressl-2.6.3... | | `-- Extracting libressl-2.6.3: .......... done | | `-- Installing ncurses-6.0.0s20171007_1... | | `-- Extracting ncurses-6.0.0s20171007_1: .......... done | | `-- Installing readline-7.0.3_1... | | `-- Extracting readline-7.0.3_1: .......... done | `-- Extracting python27-2.7.14_1: .......... done `-- Extracting py27-setuptools-36.5.0: .......... done `-- Installing suitesparse-4.0.2_7... | `-- Installing openblas-0.2.20_1,1... | `-- Extracting openblas-0.2.20_1,1: ......... done `-- Extracting suitesparse-4.0.2_7: .......... done Extracting py27-numpy-1.13.3,1: .......... done Message from gcc5-5.5.0: To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc5 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. Message from cblas-1.0_7: ===> NOTICE: The cblas port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port Message from python27-2.7.14_1: =========================================================================== Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: bsddb databases/py-bsddb gdbm databases/py-gdbm sqlite3 databases/py-sqlite3 tkinter x11-toolkits/py-tkinter =========================================================================== ===> py27-pynn-0.9.1 depends on file: /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py - found ===> Returning to build of py27-pynn-0.9.1 ===> py27-pynn-0.9.1 depends on package: py27-setuptools>0 - found ===> py27-pynn-0.9.1 depends on file: /usr/local/bin/python2.7 - found -------------------------------------------------------------------------------- -- Phase: lib-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: configure -------------------------------------------------------------------------------- ===> Configuring for py27-pynn-0.9.1 running config -------------------------------------------------------------------------------- -- Phase: build -------------------------------------------------------------------------------- ===> Building for py27-pynn-0.9.1 running build running build_py creating build creating build/lib creating build/lib/pyNN copying pyNN/connectors.py -> build/lib/pyNN copying pyNN/multisim.py -> build/lib/pyNN copying pyNN/core.py -> build/lib/pyNN copying pyNN/space.py -> build/lib/pyNN copying pyNN/errors.py -> build/lib/pyNN copying pyNN/random.py -> build/lib/pyNN copying pyNN/models.py -> build/lib/pyNN copying pyNN/parameters.py -> build/lib/pyNN copying pyNN/__init__.py -> build/lib/pyNN creating build/lib/pyNN/nest copying pyNN/nest/synapses.py -> build/lib/pyNN/nest copying pyNN/nest/cells.py -> build/lib/pyNN/nest copying pyNN/nest/conversion.py -> build/lib/pyNN/nest copying pyNN/nest/simulator.py -> build/lib/pyNN/nest copying pyNN/nest/__init__.py -> build/lib/pyNN/nest copying pyNN/nest/connectors.py -> build/lib/pyNN/nest copying pyNN/nest/recording.py -> build/lib/pyNN/nest copying pyNN/nest/populations.py -> build/lib/pyNN/nest copying pyNN/nest/projections.py -> build/lib/pyNN/nest copying pyNN/nest/nineml.py -> build/lib/pyNN/nest copying pyNN/nest/random.py -> build/lib/pyNN/nest creating build/lib/pyNN/neuron copying pyNN/neuron/cells.py -> build/lib/pyNN/neuron copying pyNN/neuron/random.py -> build/lib/pyNN/neuron copying pyNN/neuron/connectors.py -> build/lib/pyNN/neuron copying pyNN/neuron/recording.py -> build/lib/pyNN/neuron copying pyNN/neuron/projections.py -> build/lib/pyNN/neuron copying pyNN/neuron/nineml.py -> build/lib/pyNN/neuron copying pyNN/neuron/simulator.py -> build/lib/pyNN/neuron copying pyNN/neuron/__init__.py -> build/lib/pyNN/neuron copying pyNN/neuron/populations.py -> build/lib/pyNN/neuron creating build/lib/pyNN/brian copying pyNN/brian/recording.py -> build/lib/pyNN/brian copying pyNN/brian/cells.py -> build/lib/pyNN/brian copying pyNN/brian/populations.py -> build/lib/pyNN/brian copying pyNN/brian/simulator.py -> build/lib/pyNN/brian copying pyNN/brian/projections.py -> build/lib/pyNN/brian copying pyNN/brian/__init__.py -> build/lib/pyNN/brian creating build/lib/pyNN/common copying pyNN/common/populations.py -> build/lib/pyNN/common copying pyNN/common/procedural_api.py -> build/lib/pyNN/common copying pyNN/common/projections.py -> build/lib/pyNN/common copying pyNN/common/control.py -> build/lib/pyNN/common copying pyNN/common/__init__.py -> build/lib/pyNN/common creating build/lib/pyNN/mock copying pyNN/mock/__init__.py -> build/lib/pyNN/mock copying pyNN/mock/populations.py -> build/lib/pyNN/mock copying pyNN/mock/recording.py -> build/lib/pyNN/mock copying pyNN/mock/projections.py -> build/lib/pyNN/mock copying pyNN/mock/standardmodels.py -> build/lib/pyNN/mock copying pyNN/mock/simulator.py -> build/lib/pyNN/mock creating build/lib/pyNN/neuroml copying pyNN/neuroml/recording.py -> build/lib/pyNN/neuroml copying pyNN/neuroml/projections.py -> build/lib/pyNN/neuroml copying pyNN/neuroml/simulator.py -> build/lib/pyNN/neuroml copying pyNN/neuroml/__init__.py -> build/lib/pyNN/neuroml copying pyNN/neuroml/populations.py -> build/lib/pyNN/neuroml creating build/lib/pyNN/recording copying pyNN/recording/files.py -> build/lib/pyNN/recording copying pyNN/recording/__init__.py -> build/lib/pyNN/recording creating build/lib/pyNN/standardmodels copying pyNN/standardmodels/__init__.py -> build/lib/pyNN/standardmodels copying pyNN/standardmodels/cellannotated.py -> build/lib/pyNN/standardmodels copying pyNN/standardmodels/cells.py -> build/lib/pyNN/standardmodels copying pyNN/standardmodels/synapses.py -> build/lib/pyNN/standardmodels copying pyNN/standardmodels/electrodes.py -> build/lib/pyNN/standardmodels creating build/lib/pyNN/descriptions copying pyNN/descriptions/__init__.py -> build/lib/pyNN/descriptions creating build/lib/pyNN/nest/standardmodels copying pyNN/nest/standardmodels/electrodes.py -> build/lib/pyNN/nest/standardmodels copying pyNN/nest/standardmodels/cells.py -> build/lib/pyNN/nest/standardmodels copying pyNN/nest/standardmodels/__init__.py -> build/lib/pyNN/nest/standardmodels copying pyNN/nest/standardmodels/synapses.py -> build/lib/pyNN/nest/standardmodels creating build/lib/pyNN/neuroml/standardmodels copying pyNN/neuroml/standardmodels/synapses.py -> build/lib/pyNN/neuroml/standardmodels copying pyNN/neuroml/standardmodels/__init__.py -> build/lib/pyNN/neuroml/standardmodels copying pyNN/neuroml/standardmodels/electrodes.py -> build/lib/pyNN/neuroml/standardmodels copying pyNN/neuroml/standardmodels/cells.py -> build/lib/pyNN/neuroml/standardmodels creating build/lib/pyNN/neuron/standardmodels copying pyNN/neuron/standardmodels/synapses.py -> build/lib/pyNN/neuron/standardmodels copying pyNN/neuron/standardmodels/cells.py -> build/lib/pyNN/neuron/standardmodels copying pyNN/neuron/standardmodels/__init__.py -> build/lib/pyNN/neuron/standardmodels copying pyNN/neuron/standardmodels/electrodes.py -> build/lib/pyNN/neuron/standardmodels creating build/lib/pyNN/brian/standardmodels copying pyNN/brian/standardmodels/synapses.py -> build/lib/pyNN/brian/standardmodels copying pyNN/brian/standardmodels/__init__.py -> build/lib/pyNN/brian/standardmodels copying pyNN/brian/standardmodels/cells.py -> build/lib/pyNN/brian/standardmodels copying pyNN/brian/standardmodels/electrodes.py -> build/lib/pyNN/brian/standardmodels creating build/lib/pyNN/utility copying pyNN/utility/__init__.py -> build/lib/pyNN/utility copying pyNN/utility/plotting.py -> build/lib/pyNN/utility creating build/lib/pyNN/nineml copying pyNN/nineml/__init__.py -> build/lib/pyNN/nineml copying pyNN/nineml/projections.py -> build/lib/pyNN/nineml copying pyNN/nineml/standardmodels.py -> build/lib/pyNN/nineml copying pyNN/nineml/utility.py -> build/lib/pyNN/nineml copying pyNN/nineml/synapses.py -> build/lib/pyNN/nineml copying pyNN/nineml/cells.py -> build/lib/pyNN/nineml copying pyNN/nineml/read.py -> build/lib/pyNN/nineml copying pyNN/nineml/populations.py -> build/lib/pyNN/nineml copying pyNN/nineml/connectors.py -> build/lib/pyNN/nineml copying pyNN/nineml/simulator.py -> build/lib/pyNN/nineml copying pyNN/nineml/recording.py -> build/lib/pyNN/nineml creating build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/vecstim.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/expisyn.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/gammastim.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/stochastic_synapse.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/stdwa_songabbott.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/hh_traub.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/quantal_stp.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/izhikevich.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/gif.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/tmisyn.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/reset.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/gap.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/tmgsyn.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/alphasyn.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/stdwa_guetig.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/stdwa_symm.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/gsfa_grr.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/netstim2.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/stdwa_softlimits.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/adexp.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/alphaisyn.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/stdwa_vogels2011.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/stochastic_tsodyksmarkram.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/refrac.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/poisson_stim_refractory.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/tsodyksmarkram.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/ProbAMPANMDA_EMS.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/ProbGABAAB_EMS.mod -> build/lib/pyNN/neuron/nmodl creating build/lib/pyNN/nest/extensions copying pyNN/nest/extensions/stochastic_stp_connection_impl.h -> build/lib/pyNN/nest/extensions copying pyNN/nest/extensions/pynn_extensions.h -> build/lib/pyNN/nest/extensions copying pyNN/nest/extensions/stochastic_stp_connection.h -> build/lib/pyNN/nest/extensions copying pyNN/nest/extensions/simple_stochastic_connection.h -> build/lib/pyNN/nest/extensions copying pyNN/nest/extensions/pynn_extensions.cpp -> build/lib/pyNN/nest/extensions copying pyNN/nest/extensions/CMakeLists.txt -> build/lib/pyNN/nest/extensions creating build/lib/pyNN/nest/extensions/sli copying pyNN/nest/extensions/sli/pynn_extensions-init.sli -> build/lib/pyNN/nest/extensions/sli creating build/lib/pyNN/descriptions/templates creating build/lib/pyNN/descriptions/templates/string copying pyNN/descriptions/templates/string/population_default.txt -> build/lib/pyNN/descriptions/templates/string copying pyNN/descriptions/templates/string/synapsedynamics_default.txt -> build/lib/pyNN/descriptions/templates/string copying pyNN/descriptions/templates/string/modeltype_default.txt -> build/lib/pyNN/descriptions/templates/string copying pyNN/descriptions/templates/string/populationview_default.txt -> build/lib/pyNN/descriptions/templates/string copying pyNN/descriptions/templates/string/projection_default.txt -> build/lib/pyNN/descriptions/templates/string copying pyNN/descriptions/templates/string/assembly_default.txt -> build/lib/pyNN/descriptions/templates/string creating build/lib/pyNN/descriptions/templates/cheetah copying pyNN/descriptions/templates/cheetah/projection_default.txt -> build/lib/pyNN/descriptions/templates/cheetah copying pyNN/descriptions/templates/cheetah/modeltype_default.txt -> build/lib/pyNN/descriptions/templates/cheetah copying pyNN/descriptions/templates/cheetah/population_default.txt -> build/lib/pyNN/descriptions/templates/cheetah copying pyNN/descriptions/templates/cheetah/assembly_default.txt -> build/lib/pyNN/descriptions/templates/cheetah copying pyNN/descriptions/templates/cheetah/synapsedynamics_default.txt -> build/lib/pyNN/descriptions/templates/cheetah copying pyNN/descriptions/templates/cheetah/populationview_default.txt -> build/lib/pyNN/descriptions/templates/cheetah copying pyNN/descriptions/templates/cheetah/population_old.txt -> build/lib/pyNN/descriptions/templates/cheetah creating build/lib/pyNN/descriptions/templates/jinja2 copying pyNN/descriptions/templates/jinja2/population_default.txt -> build/lib/pyNN/descriptions/templates/jinja2 copying pyNN/descriptions/templates/jinja2/synapsedynamics_default.txt -> build/lib/pyNN/descriptions/templates/jinja2 copying pyNN/descriptions/templates/jinja2/modeltype_default.txt -> build/lib/pyNN/descriptions/templates/jinja2 copying pyNN/descriptions/templates/jinja2/populationview_default.txt -> build/lib/pyNN/descriptions/templates/jinja2 copying pyNN/descriptions/templates/jinja2/population_old.txt -> build/lib/pyNN/descriptions/templates/jinja2 copying pyNN/descriptions/templates/jinja2/assembly_default.txt -> build/lib/pyNN/descriptions/templates/jinja2 copying pyNN/descriptions/templates/jinja2/projection_default.txt -> build/lib/pyNN/descriptions/templates/jinja2 Unable to find nrnivmodl. It will not be possible to use the pyNN.neuron module. -------------------------------------------------------------------------------- -- Phase: run-depends -------------------------------------------------------------------------------- ===> py27-pynn-0.9.1 depends on file: /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py - found ===> py27-pynn-0.9.1 depends on package: py27-setuptools>0 - found ===> py27-pynn-0.9.1 depends on file: /usr/local/bin/python2.7 - found -------------------------------------------------------------------------------- -- Phase: stage -------------------------------------------------------------------------------- ===> Staging for py27-pynn-0.9.1 ===> Generating temporary packing list running install running build running build_py Unable to find nrnivmodl. It will not be possible to use the pyNN.neuron module. running install_lib creating /construction/science/pynn/stage/usr/local/lib/python2.7 creating /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages creating /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN creating /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuroml copying build/lib/pyNN/neuroml/projections.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuroml copying build/lib/pyNN/neuroml/populations.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuroml copying build/lib/pyNN/neuroml/__init__.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuroml copying build/lib/pyNN/neuroml/simulator.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuroml creating /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuroml/standardmodels copying build/lib/pyNN/neuroml/standardmodels/cells.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuroml/standardmodels copying build/lib/pyNN/neuroml/standardmodels/synapses.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuroml/standardmodels copying build/lib/pyNN/neuroml/standardmodels/electrodes.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuroml/standardmodels copying build/lib/pyNN/neuroml/standardmodels/__init__.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuroml/standardmodels copying build/lib/pyNN/neuroml/recording.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuroml creating /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/recording copying build/lib/pyNN/recording/__init__.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/recording copying build/lib/pyNN/recording/files.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/recording creating /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/common copying build/lib/pyNN/common/populations.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/common copying build/lib/pyNN/common/__init__.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/common copying build/lib/pyNN/common/procedural_api.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/common copying build/lib/pyNN/common/projections.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/common copying build/lib/pyNN/common/control.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/common copying build/lib/pyNN/errors.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN copying build/lib/pyNN/parameters.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN creating /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/utility copying build/lib/pyNN/utility/__init__.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/utility copying build/lib/pyNN/utility/plotting.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/utility creating /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/mock copying build/lib/pyNN/mock/simulator.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/mock copying build/lib/pyNN/mock/__init__.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/mock copying build/lib/pyNN/mock/populations.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/mock copying build/lib/pyNN/mock/projections.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/mock copying build/lib/pyNN/mock/recording.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/mock copying build/lib/pyNN/mock/standardmodels.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/mock creating /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/brian copying build/lib/pyNN/brian/recording.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/brian copying build/lib/pyNN/brian/populations.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/brian copying build/lib/pyNN/brian/__init__.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/brian creating /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/brian/standardmodels copying build/lib/pyNN/brian/standardmodels/__init__.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/brian/standardmodels copying build/lib/pyNN/brian/standardmodels/cells.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/brian/standardmodels copying build/lib/pyNN/brian/standardmodels/electrodes.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/brian/standardmodels copying build/lib/pyNN/brian/standardmodels/synapses.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/brian/standardmodels copying build/lib/pyNN/brian/projections.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/brian copying build/lib/pyNN/brian/simulator.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/brian copying build/lib/pyNN/brian/cells.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/brian creating /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nineml copying build/lib/pyNN/nineml/read.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nineml copying build/lib/pyNN/nineml/populations.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nineml copying build/lib/pyNN/nineml/utility.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nineml copying build/lib/pyNN/nineml/recording.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nineml copying build/lib/pyNN/nineml/connectors.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nineml copying build/lib/pyNN/nineml/__init__.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nineml copying build/lib/pyNN/nineml/projections.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nineml copying build/lib/pyNN/nineml/cells.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nineml copying build/lib/pyNN/nineml/synapses.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nineml copying build/lib/pyNN/nineml/simulator.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nineml copying build/lib/pyNN/nineml/standardmodels.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nineml copying build/lib/pyNN/core.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN creating /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions creating /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions/templates creating /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions/templates/string copying build/lib/pyNN/descriptions/templates/string/population_default.txt -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions/templates/string copying build/lib/pyNN/descriptions/templates/string/populationview_default.txt -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions/templates/string copying build/lib/pyNN/descriptions/templates/string/projection_default.txt -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions/templates/string copying build/lib/pyNN/descriptions/templates/string/synapsedynamics_default.txt -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions/templates/string copying build/lib/pyNN/descriptions/templates/string/assembly_default.txt -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions/templates/string copying build/lib/pyNN/descriptions/templates/string/modeltype_default.txt -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions/templates/string creating /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions/templates/jinja2 copying build/lib/pyNN/descriptions/templates/jinja2/population_default.txt -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions/templates/jinja2 copying build/lib/pyNN/descriptions/templates/jinja2/population_old.txt -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions/templates/jinja2 copying build/lib/pyNN/descriptions/templates/jinja2/synapsedynamics_default.txt -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions/templates/jinja2 copying build/lib/pyNN/descriptions/templates/jinja2/modeltype_default.txt -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions/templates/jinja2 copying build/lib/pyNN/descriptions/templates/jinja2/assembly_default.txt -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions/templates/jinja2 copying build/lib/pyNN/descriptions/templates/jinja2/projection_default.txt -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions/templates/jinja2 copying build/lib/pyNN/descriptions/templates/jinja2/populationview_default.txt -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions/templates/jinja2 creating /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions/templates/cheetah copying build/lib/pyNN/descriptions/templates/cheetah/assembly_default.txt -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions/templates/cheetah copying build/lib/pyNN/descriptions/templates/cheetah/projection_default.txt -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions/templates/cheetah copying build/lib/pyNN/descriptions/templates/cheetah/populationview_default.txt -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions/templates/cheetah copying build/lib/pyNN/descriptions/templates/cheetah/population_default.txt -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions/templates/cheetah copying build/lib/pyNN/descriptions/templates/cheetah/population_old.txt -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions/templates/cheetah copying build/lib/pyNN/descriptions/templates/cheetah/synapsedynamics_default.txt -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions/templates/cheetah copying build/lib/pyNN/descriptions/templates/cheetah/modeltype_default.txt -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions/templates/cheetah copying build/lib/pyNN/descriptions/__init__.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions copying build/lib/pyNN/multisim.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN creating /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/standardmodels copying build/lib/pyNN/standardmodels/electrodes.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/standardmodels copying build/lib/pyNN/standardmodels/cellannotated.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/standardmodels copying build/lib/pyNN/standardmodels/synapses.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/standardmodels copying build/lib/pyNN/standardmodels/cells.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/standardmodels copying build/lib/pyNN/standardmodels/__init__.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/standardmodels copying build/lib/pyNN/connectors.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN copying build/lib/pyNN/models.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN copying build/lib/pyNN/random.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN creating /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron copying build/lib/pyNN/neuron/populations.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron copying build/lib/pyNN/neuron/random.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron copying build/lib/pyNN/neuron/cells.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron creating /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/standardmodels copying build/lib/pyNN/neuron/standardmodels/__init__.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/standardmodels copying build/lib/pyNN/neuron/standardmodels/electrodes.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/standardmodels copying build/lib/pyNN/neuron/standardmodels/cells.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/standardmodels copying build/lib/pyNN/neuron/standardmodels/synapses.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/standardmodels creating /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/netstim2.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/stdwa_symm.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/gap.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/stdwa_softlimits.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/refrac.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/tsodyksmarkram.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/stochastic_tsodyksmarkram.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/gif.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/stdwa_vogels2011.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/alphaisyn.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/stochastic_synapse.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/adexp.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/vecstim.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/ProbGABAAB_EMS.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/stdwa_guetig.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/tmisyn.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/quantal_stp.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/ProbAMPANMDA_EMS.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/izhikevich.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/stdwa_songabbott.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/expisyn.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/hh_traub.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/gammastim.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/gsfa_grr.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/reset.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/alphasyn.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/tmgsyn.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/nmodl/poisson_stim_refractory.mod -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nmodl copying build/lib/pyNN/neuron/projections.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron copying build/lib/pyNN/neuron/__init__.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron copying build/lib/pyNN/neuron/connectors.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron copying build/lib/pyNN/neuron/nineml.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron copying build/lib/pyNN/neuron/recording.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron copying build/lib/pyNN/neuron/simulator.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron copying build/lib/pyNN/__init__.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN creating /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest copying build/lib/pyNN/nest/connectors.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest copying build/lib/pyNN/nest/synapses.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest creating /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/extensions copying build/lib/pyNN/nest/extensions/simple_stochastic_connection.h -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/extensions copying build/lib/pyNN/nest/extensions/pynn_extensions.h -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/extensions copying build/lib/pyNN/nest/extensions/stochastic_stp_connection.h -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/extensions copying build/lib/pyNN/nest/extensions/CMakeLists.txt -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/extensions copying build/lib/pyNN/nest/extensions/pynn_extensions.cpp -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/extensions copying build/lib/pyNN/nest/extensions/stochastic_stp_connection_impl.h -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/extensions creating /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/extensions/sli copying build/lib/pyNN/nest/extensions/sli/pynn_extensions-init.sli -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/extensions/sli copying build/lib/pyNN/nest/populations.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest copying build/lib/pyNN/nest/recording.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest copying build/lib/pyNN/nest/conversion.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest copying build/lib/pyNN/nest/projections.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest copying build/lib/pyNN/nest/nineml.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest creating /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/standardmodels copying build/lib/pyNN/nest/standardmodels/cells.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/standardmodels copying build/lib/pyNN/nest/standardmodels/electrodes.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/standardmodels copying build/lib/pyNN/nest/standardmodels/__init__.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/standardmodels copying build/lib/pyNN/nest/standardmodels/synapses.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/standardmodels copying build/lib/pyNN/nest/simulator.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest copying build/lib/pyNN/nest/cells.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest copying build/lib/pyNN/nest/__init__.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest copying build/lib/pyNN/nest/random.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest copying build/lib/pyNN/space.py -> /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuroml/projections.py to projections.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuroml/populations.py to populations.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuroml/__init__.py to __init__.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuroml/simulator.py to simulator.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuroml/standardmodels/cells.py to cells.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuroml/standardmodels/synapses.py to synapses.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuroml/standardmodels/electrodes.py to electrodes.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuroml/standardmodels/__init__.py to __init__.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuroml/recording.py to recording.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/recording/__init__.py to __init__.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/recording/files.py to files.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/common/populations.py to populations.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/common/__init__.py to __init__.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/common/procedural_api.py to procedural_api.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/common/projections.py to projections.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/common/control.py to control.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/errors.py to errors.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/parameters.py to parameters.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/utility/__init__.py to __init__.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/utility/plotting.py to plotting.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/mock/simulator.py to simulator.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/mock/__init__.py to __init__.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/mock/populations.py to populations.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/mock/projections.py to projections.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/mock/recording.py to recording.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/mock/standardmodels.py to standardmodels.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/brian/recording.py to recording.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/brian/populations.py to populations.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/brian/__init__.py to __init__.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/brian/standardmodels/__init__.py to __init__.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/brian/standardmodels/cells.py to cells.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/brian/standardmodels/electrodes.py to electrodes.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/brian/standardmodels/synapses.py to synapses.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/brian/projections.py to projections.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/brian/simulator.py to simulator.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/brian/cells.py to cells.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nineml/read.py to read.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nineml/populations.py to populations.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nineml/utility.py to utility.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nineml/recording.py to recording.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nineml/connectors.py to connectors.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nineml/__init__.py to __init__.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nineml/projections.py to projections.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nineml/cells.py to cells.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nineml/synapses.py to synapses.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nineml/simulator.py to simulator.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nineml/standardmodels.py to standardmodels.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/core.py to core.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/descriptions/__init__.py to __init__.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/multisim.py to multisim.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/standardmodels/electrodes.py to electrodes.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/standardmodels/cellannotated.py to cellannotated.pyc File "/usr/local/lib/python2.7/site-packages/pyNN/standardmodels/cellannotated.py", line 39 #Leaky IAF ^ SyntaxError: invalid syntax byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/standardmodels/synapses.py to synapses.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/standardmodels/cells.py to cells.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/standardmodels/__init__.py to __init__.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/connectors.py to connectors.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/models.py to models.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/random.py to random.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/populations.py to populations.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/random.py to random.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/cells.py to cells.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/standardmodels/__init__.py to __init__.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/standardmodels/electrodes.py to electrodes.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/standardmodels/cells.py to cells.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/standardmodels/synapses.py to synapses.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/projections.py to projections.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/__init__.py to __init__.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/connectors.py to connectors.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/nineml.py to nineml.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/recording.py to recording.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/neuron/simulator.py to simulator.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/__init__.py to __init__.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/connectors.py to connectors.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/synapses.py to synapses.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/populations.py to populations.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/recording.py to recording.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/conversion.py to conversion.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/projections.py to projections.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/nineml.py to nineml.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/standardmodels/cells.py to cells.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/standardmodels/electrodes.py to electrodes.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/standardmodels/__init__.py to __init__.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/standardmodels/synapses.py to synapses.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/simulator.py to simulator.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/cells.py to cells.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/__init__.py to __init__.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/nest/random.py to random.pyc byte-compiling /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/pyNN/space.py to space.pyc writing byte-compilation script '/tmp/tmp9hakBX.py' /usr/local/bin/python2.7 -O /tmp/tmp9hakBX.py File "/usr/local/lib/python2.7/site-packages/pyNN/standardmodels/cellannotated.py", line 39 #Leaky IAF ^ SyntaxError: invalid syntax removing /tmp/tmp9hakBX.py running install_egg_info running egg_info creating PyNN.egg-info writing PyNN.egg-info/PKG-INFO writing top-level names to PyNN.egg-info/top_level.txt writing dependency_links to PyNN.egg-info/dependency_links.txt writing manifest file 'PyNN.egg-info/SOURCES.txt' reading manifest file 'PyNN.egg-info/SOURCES.txt' writing manifest file 'PyNN.egg-info/SOURCES.txt' Copying PyNN.egg-info to /construction/science/pynn/stage/usr/local/lib/python2.7/site-packages/PyNN-0.9.1-py2.7.egg-info running install_scripts writing list of installed files to '/construction/science/pynn/.PLIST.pymodtmp' ====> Compressing man pages (compress-man) -------------------------------------------------------------------------------- -- Phase: package -------------------------------------------------------------------------------- ===> Building package for py27-pynn-0.9.1 file sizes/checksums [324]: .... done packing files [324]: .... done packing directories [0]: . done -------------------------------------------------- -- Termination -------------------------------------------------- Finished: Wednesday, 22 NOV 2017 at 07:23:23 UTC Duration: 00:00:31