=> Building math/py-pymc3@py27 Started : Thursday, 19 APR 2018 at 01:26:19 UTC Platform: 5.3-DEVELOPMENT DragonFly v5.3.0.81.g32506c-DEVELOPMENT #29: Tue Apr 10 08:49:52 PDT 2018 marino@pkgbox64.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 -------------------------------------------------- -- Environment -------------------------------------------------- UNAME_r=5.0-SYNTH UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=DragonFly 5.0-SYNTH UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 TERM=dumb PKG_CACHEDIR=/var/cache/pkg8 PKG_DBDIR=/var/db/pkg8 PORTSDIR=/xports LANG=C HOME=/root USER=root -------------------------------------------------- -- Options -------------------------------------------------- -------------------------------------------------- -- CONFIGURE_ENV -------------------------------------------------- PYTHON="/usr/local/bin/python2.7" XDG_DATA_HOME=/construction/math/py-pymc3 XDG_CONFIG_HOME=/construction/math/py-pymc3 HOME=/construction/math/py-pymc3 TMPDIR="/tmp" PATH=/construction/math/py-pymc3/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc50 -------------------------------------------------- -- CONFIGURE_ARGS -------------------------------------------------- -------------------------------------------------- -- MAKE_ENV -------------------------------------------------- XDG_DATA_HOME=/construction/math/py-pymc3 XDG_CONFIG_HOME=/construction/math/py-pymc3 HOME=/construction/math/py-pymc3 TMPDIR="/tmp" PATH=/construction/math/py-pymc3/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc50 LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS="" LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" -------------------------------------------------- -- MAKE_ARGS -------------------------------------------------- DESTDIR=/construction/math/py-pymc3/stage -------------------------------------------------- -- PLIST_SUB -------------------------------------------------- PORTDOCS="" PORTEXAMPLES="" PYTHON_INCLUDEDIR=include/python2.7 PYTHON_LIBDIR=lib/python2.7 PYTHON_PLATFORM=dragonfly5 PYTHON_PYOEXTENSION=pyo PYTHON_SITELIBDIR=lib/python2.7/site-packages PYTHON_SUFFIX=27 PYTHON_VER=2.7 PYTHON_VERSION=python2.7 PYTHON2="" PYTHON3="@comment " OSREL=5.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/py27-pymc3" EXAMPLESDIR="share/examples/py27-pymc3" DATADIR="share/py27-pymc3" WWWDIR="www/py27-pymc3" ETCDIR="etc/py27-pymc3" -------------------------------------------------- -- SUB_LIST -------------------------------------------------- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/py27-pymc3 DOCSDIR=/usr/local/share/doc/py27-pymc3 EXAMPLESDIR=/usr/local/share/examples/py27-pymc3 WWWDIR=/usr/local/www/py27-pymc3 ETCDIR=/usr/local/etc/py27-pymc3 -------------------------------------------------- -- /etc/make.conf -------------------------------------------------- SYNTHPROFILE=Release-5.0 USE_PACKAGE_DEPENDS_ONLY=yes PACKAGE_BUILDING=yes BATCH=yes PKG_CREATE_VERBOSE=yes PORTSDIR=/xports DISTDIR=/distfiles WRKDIRPREFIX=/construction PORT_DBDIR=/options PACKAGES=/packages MAKE_JOBS_NUMBER_LIMIT=5 LICENSES_ACCEPTED= NONE HAVE_COMPAT_IA32_KERN= CONFIGURE_MAX_CMD_LEN=262144 _SMP_CPUS=8 UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=500000 OSVERSION=9999999 OSREL=5.0 _OSRELEASE=5.0-SYNTH -------------------------------------------------------------------------------- -- Phase: check-sanity -------------------------------------------------------------------------------- ===> License APACHE20 accepted by the user -------------------------------------------------------------------------------- -- Phase: pkg-depends -------------------------------------------------------------------------------- ===> py27-pymc3-3.3 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.10.5.txz Installing pkg-1.10.5... Extracting pkg-1.10.5: .......... done ===> py27-pymc3-3.3 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py27-pymc3-3.3 -------------------------------------------------------------------------------- -- Phase: fetch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: fetch -------------------------------------------------------------------------------- ===> License APACHE20 accepted by the user ===> Fetching all distfiles required by py27-pymc3-3.3 for building -------------------------------------------------------------------------------- -- Phase: checksum -------------------------------------------------------------------------------- ===> License APACHE20 accepted by the user ===> Fetching all distfiles required by py27-pymc3-3.3 for building => SHA256 Checksum OK for pymc-devs-pymc3-v3.3_GH0.tar.gz. -------------------------------------------------------------------------------- -- Phase: extract-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: extract -------------------------------------------------------------------------------- ===> License APACHE20 accepted by the user ===> Fetching all distfiles required by py27-pymc3-3.3 for building ===> Extracting for py27-pymc3-3.3 => SHA256 Checksum OK for pymc-devs-pymc3-v3.3_GH0.tar.gz. -------------------------------------------------------------------------------- -- Phase: patch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: patch -------------------------------------------------------------------------------- ===> Patching for py27-pymc3-3.3 -------------------------------------------------------------------------------- -- Phase: build-depends -------------------------------------------------------------------------------- ===> py27-pymc3-3.3 depends on package: py27-setuptools>0 - not found ===> Installing existing package /packages/All/py27-setuptools-39.0.1.txz Installing py27-setuptools-39.0.1... `-- Installing python27-2.7.14_1... | `-- Installing expat-2.2.5... | `-- Extracting expat-2.2.5: .......... done | `-- Installing gettext-runtime-0.19.8.1_1... | | `-- Installing indexinfo-0.3.1... | | `-- Extracting indexinfo-0.3.1: .... done | `-- Extracting gettext-runtime-0.19.8.1_1: .......... done | `-- Installing libffi-3.2.1_2... | `-- Extracting libffi-3.2.1_2: .......... done | `-- Installing libressl-2.6.4... | `-- Extracting libressl-2.6.4: .......... done | `-- Installing ncurses-6.0.0s20171223_1... | `-- Extracting ncurses-6.0.0s20171223_1: .......... done | `-- Installing readline-7.0.3_1... | `-- Extracting readline-7.0.3_1: .......... done `-- Extracting python27-2.7.14_1: .......... done Extracting py27-setuptools-39.0.1: .......... done Message from python27-2.7.14_1: =========================================================================== Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: bsddb databases/py-bsddb gdbm databases/py-gdbm sqlite3 databases/py-sqlite3 tkinter x11-toolkits/py-tkinter =========================================================================== ===> py27-pymc3-3.3 depends on package: py27-setuptools>0 - found ===> Returning to build of py27-pymc3-3.3 ===> py27-pymc3-3.3 depends on file: /usr/local/bin/python2.7 - found -------------------------------------------------------------------------------- -- Phase: lib-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: configure -------------------------------------------------------------------------------- ===> Configuring for py27-pymc3-3.3 running config -------------------------------------------------------------------------------- -- Phase: build -------------------------------------------------------------------------------- ===> Building for py27-pymc3-3.3 running build running build_py creating build creating build/lib creating build/lib/pymc3 copying pymc3/exceptions.py -> build/lib/pymc3 copying pymc3/math.py -> build/lib/pymc3 copying pymc3/memoize.py -> build/lib/pymc3 copying pymc3/model.py -> build/lib/pymc3 copying pymc3/sampling.py -> build/lib/pymc3 copying pymc3/stats.py -> build/lib/pymc3 copying pymc3/theanof.py -> build/lib/pymc3 copying pymc3/util.py -> build/lib/pymc3 copying pymc3/vartypes.py -> build/lib/pymc3 copying pymc3/__init__.py -> build/lib/pymc3 copying pymc3/blocking.py -> build/lib/pymc3 copying pymc3/data.py -> build/lib/pymc3 copying pymc3/diagnostics.py -> build/lib/pymc3 creating build/lib/pymc3/external copying pymc3/external/__init__.py -> build/lib/pymc3/external creating build/lib/pymc3/glm copying pymc3/glm/__init__.py -> build/lib/pymc3/glm copying pymc3/glm/families.py -> build/lib/pymc3/glm copying pymc3/glm/linear.py -> build/lib/pymc3/glm copying pymc3/glm/utils.py -> build/lib/pymc3/glm creating build/lib/pymc3/gp copying pymc3/gp/__init__.py -> build/lib/pymc3/gp copying pymc3/gp/cov.py -> build/lib/pymc3/gp copying pymc3/gp/gp.py -> build/lib/pymc3/gp copying pymc3/gp/mean.py -> build/lib/pymc3/gp copying pymc3/gp/util.py -> build/lib/pymc3/gp creating build/lib/pymc3/plots copying pymc3/plots/__init__.py -> build/lib/pymc3/plots copying pymc3/plots/artists.py -> build/lib/pymc3/plots copying pymc3/plots/autocorrplot.py -> build/lib/pymc3/plots copying pymc3/plots/compareplot.py -> build/lib/pymc3/plots copying pymc3/plots/densityplot.py -> build/lib/pymc3/plots copying pymc3/plots/energyplot.py -> build/lib/pymc3/plots copying pymc3/plots/forestplot.py -> build/lib/pymc3/plots copying pymc3/plots/kdeplot.py -> build/lib/pymc3/plots copying pymc3/plots/posteriorplot.py -> build/lib/pymc3/plots copying pymc3/plots/traceplot.py -> build/lib/pymc3/plots copying pymc3/plots/utils.py -> build/lib/pymc3/plots creating build/lib/pymc3/step_methods copying pymc3/step_methods/__init__.py -> build/lib/pymc3/step_methods copying pymc3/step_methods/arraystep.py -> build/lib/pymc3/step_methods copying pymc3/step_methods/compound.py -> build/lib/pymc3/step_methods copying pymc3/step_methods/elliptical_slice.py -> build/lib/pymc3/step_methods copying pymc3/step_methods/gibbs.py -> build/lib/pymc3/step_methods copying pymc3/step_methods/metropolis.py -> build/lib/pymc3/step_methods copying pymc3/step_methods/sgmcmc.py -> build/lib/pymc3/step_methods copying pymc3/step_methods/slicer.py -> build/lib/pymc3/step_methods copying pymc3/step_methods/smc.py -> build/lib/pymc3/step_methods copying pymc3/step_methods/step_sizes.py -> build/lib/pymc3/step_methods creating build/lib/pymc3/tests copying pymc3/tests/__init__.py -> build/lib/pymc3/tests copying pymc3/tests/backend_fixtures.py -> build/lib/pymc3/tests copying pymc3/tests/checks.py -> build/lib/pymc3/tests copying pymc3/tests/conftest.py -> build/lib/pymc3/tests copying pymc3/tests/helpers.py -> build/lib/pymc3/tests copying pymc3/tests/models.py -> build/lib/pymc3/tests copying pymc3/tests/sampler_fixtures.py -> build/lib/pymc3/tests copying pymc3/tests/test_diagnostics.py -> build/lib/pymc3/tests copying pymc3/tests/test_dist_math.py -> build/lib/pymc3/tests copying pymc3/tests/test_distribution_defaults.py -> build/lib/pymc3/tests copying pymc3/tests/test_distributions.py -> build/lib/pymc3/tests copying pymc3/tests/test_distributions_random.py -> build/lib/pymc3/tests copying pymc3/tests/test_distributions_timeseries.py -> build/lib/pymc3/tests copying pymc3/tests/test_examples.py -> build/lib/pymc3/tests copying pymc3/tests/test_glm.py -> build/lib/pymc3/tests copying pymc3/tests/test_gp.py -> build/lib/pymc3/tests copying pymc3/tests/test_hdf5_backend.py -> build/lib/pymc3/tests copying pymc3/tests/test_hmc.py -> build/lib/pymc3/tests copying pymc3/tests/test_math.py -> build/lib/pymc3/tests copying pymc3/tests/test_memo.py -> build/lib/pymc3/tests copying pymc3/tests/test_minibatches.py -> build/lib/pymc3/tests copying pymc3/tests/test_missing.py -> build/lib/pymc3/tests copying pymc3/tests/test_mixture.py -> build/lib/pymc3/tests copying pymc3/tests/test_model.py -> build/lib/pymc3/tests copying pymc3/tests/test_model_func.py -> build/lib/pymc3/tests copying pymc3/tests/test_model_helpers.py -> build/lib/pymc3/tests copying pymc3/tests/test_modelcontext.py -> build/lib/pymc3/tests copying pymc3/tests/test_models_linear.py -> build/lib/pymc3/tests copying pymc3/tests/test_models_utils.py -> build/lib/pymc3/tests copying pymc3/tests/test_ndarray_backend.py -> build/lib/pymc3/tests copying pymc3/tests/test_pickling.py -> build/lib/pymc3/tests copying pymc3/tests/test_plots.py -> build/lib/pymc3/tests copying pymc3/tests/test_posdef_sym.py -> build/lib/pymc3/tests copying pymc3/tests/test_posteriors.py -> build/lib/pymc3/tests copying pymc3/tests/test_profile.py -> build/lib/pymc3/tests copying pymc3/tests/test_quadpotential.py -> build/lib/pymc3/tests copying pymc3/tests/test_random.py -> build/lib/pymc3/tests copying pymc3/tests/test_sampling.py -> build/lib/pymc3/tests copying pymc3/tests/test_sgfs.py -> build/lib/pymc3/tests copying pymc3/tests/test_shared.py -> build/lib/pymc3/tests copying pymc3/tests/test_smc.py -> build/lib/pymc3/tests copying pymc3/tests/test_special_functions.py -> build/lib/pymc3/tests copying pymc3/tests/test_sqlite_backend.py -> build/lib/pymc3/tests copying pymc3/tests/test_starting.py -> build/lib/pymc3/tests copying pymc3/tests/test_stats.py -> build/lib/pymc3/tests copying pymc3/tests/test_step.py -> build/lib/pymc3/tests copying pymc3/tests/test_text_backend.py -> build/lib/pymc3/tests copying pymc3/tests/test_theanof.py -> build/lib/pymc3/tests copying pymc3/tests/test_tracetab.py -> build/lib/pymc3/tests copying pymc3/tests/test_transforms.py -> build/lib/pymc3/tests copying pymc3/tests/test_tuning.py -> build/lib/pymc3/tests copying pymc3/tests/test_types.py -> build/lib/pymc3/tests copying pymc3/tests/test_updates.py -> build/lib/pymc3/tests copying pymc3/tests/test_util.py -> build/lib/pymc3/tests copying pymc3/tests/test_variational_inference.py -> build/lib/pymc3/tests creating build/lib/pymc3/tuning copying pymc3/tuning/__init__.py -> build/lib/pymc3/tuning copying pymc3/tuning/scaling.py -> build/lib/pymc3/tuning copying pymc3/tuning/starting.py -> build/lib/pymc3/tuning creating build/lib/pymc3/variational copying pymc3/variational/__init__.py -> build/lib/pymc3/variational copying pymc3/variational/approximations.py -> build/lib/pymc3/variational copying pymc3/variational/callbacks.py -> build/lib/pymc3/variational copying pymc3/variational/flows.py -> build/lib/pymc3/variational copying pymc3/variational/inference.py -> build/lib/pymc3/variational copying pymc3/variational/operators.py -> build/lib/pymc3/variational copying pymc3/variational/opvi.py -> build/lib/pymc3/variational copying pymc3/variational/stein.py -> build/lib/pymc3/variational copying pymc3/variational/test_functions.py -> build/lib/pymc3/variational copying pymc3/variational/updates.py -> build/lib/pymc3/variational creating build/lib/pymc3/backends copying pymc3/backends/__init__.py -> build/lib/pymc3/backends copying pymc3/backends/base.py -> build/lib/pymc3/backends copying pymc3/backends/hdf5.py -> build/lib/pymc3/backends copying pymc3/backends/ndarray.py -> build/lib/pymc3/backends copying pymc3/backends/report.py -> build/lib/pymc3/backends copying pymc3/backends/smc_text.py -> build/lib/pymc3/backends copying pymc3/backends/sqlite.py -> build/lib/pymc3/backends copying pymc3/backends/text.py -> build/lib/pymc3/backends copying pymc3/backends/tracetab.py -> build/lib/pymc3/backends creating build/lib/pymc3/distributions copying pymc3/distributions/__init__.py -> build/lib/pymc3/distributions copying pymc3/distributions/bound.py -> build/lib/pymc3/distributions copying pymc3/distributions/continuous.py -> build/lib/pymc3/distributions copying pymc3/distributions/discrete.py -> build/lib/pymc3/distributions copying pymc3/distributions/dist_math.py -> build/lib/pymc3/distributions copying pymc3/distributions/distribution.py -> build/lib/pymc3/distributions copying pymc3/distributions/mixture.py -> build/lib/pymc3/distributions copying pymc3/distributions/multivariate.py -> build/lib/pymc3/distributions copying pymc3/distributions/special.py -> build/lib/pymc3/distributions copying pymc3/distributions/timeseries.py -> build/lib/pymc3/distributions copying pymc3/distributions/transforms.py -> build/lib/pymc3/distributions creating build/lib/pymc3/examples copying pymc3/examples/disaster_model.py -> build/lib/pymc3/examples copying pymc3/examples/disaster_model_theano_op.py -> build/lib/pymc3/examples copying pymc3/examples/factor_potential.py -> build/lib/pymc3/examples copying pymc3/examples/garch_example.py -> build/lib/pymc3/examples copying pymc3/examples/gelman_bioassay.py -> build/lib/pymc3/examples copying pymc3/examples/gelman_schools.py -> build/lib/pymc3/examples copying pymc3/examples/lasso_missing.py -> build/lib/pymc3/examples copying pymc3/examples/lightspeed_example.py -> build/lib/pymc3/examples copying pymc3/examples/samplers_mvnormal.py -> build/lib/pymc3/examples copying pymc3/examples/simpletest.py -> build/lib/pymc3/examples copying pymc3/examples/GHME_2013.py -> build/lib/pymc3/examples copying pymc3/examples/LKJ_correlation.py -> build/lib/pymc3/examples copying pymc3/examples/__init__.py -> build/lib/pymc3/examples copying pymc3/examples/arbitrary_stochastic.py -> build/lib/pymc3/examples copying pymc3/examples/arma_example.py -> build/lib/pymc3/examples copying pymc3/examples/baseball.py -> build/lib/pymc3/examples copying pymc3/examples/censored_data.py -> build/lib/pymc3/examples copying pymc3/examples/custom_dists.py -> build/lib/pymc3/examples creating build/lib/pymc3/step_methods/hmc copying pymc3/step_methods/hmc/__init__.py -> build/lib/pymc3/step_methods/hmc copying pymc3/step_methods/hmc/base_hmc.py -> build/lib/pymc3/step_methods/hmc copying pymc3/step_methods/hmc/hmc.py -> build/lib/pymc3/step_methods/hmc copying pymc3/step_methods/hmc/integration.py -> build/lib/pymc3/step_methods/hmc copying pymc3/step_methods/hmc/nuts.py -> build/lib/pymc3/step_methods/hmc copying pymc3/step_methods/hmc/quadpotential.py -> build/lib/pymc3/step_methods/hmc copying pymc3/step_methods/hmc/trajectory.py -> build/lib/pymc3/step_methods/hmc running egg_info creating pymc3.egg-info writing requirements to pymc3.egg-info/requires.txt writing pymc3.egg-info/PKG-INFO writing top-level names to pymc3.egg-info/top_level.txt writing dependency_links to pymc3.egg-info/dependency_links.txt writing manifest file 'pymc3.egg-info/SOURCES.txt' reading manifest file 'pymc3.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*' under directory 'source' writing manifest file 'pymc3.egg-info/SOURCES.txt' creating build/lib/pymc3/examples/data copying pymc3/examples/data/Guber1999data.txt -> build/lib/pymc3/examples/data copying pymc3/examples/data/HtWt.csv -> build/lib/pymc3/examples/data copying pymc3/examples/data/SP500.csv -> build/lib/pymc3/examples/data copying pymc3/examples/data/cty.dat -> build/lib/pymc3/examples/data copying pymc3/examples/data/efron-morris-75-data.tsv -> build/lib/pymc3/examples/data copying pymc3/examples/data/extrahard_MC_500_5_4.npz.npy -> build/lib/pymc3/examples/data copying pymc3/examples/data/extrahard_MC_500_5_4_reference_classes.npy -> build/lib/pymc3/examples/data copying pymc3/examples/data/milk.csv -> build/lib/pymc3/examples/data copying pymc3/examples/data/monthly_in_situ_co2_mlo.csv -> build/lib/pymc3/examples/data copying pymc3/examples/data/pancreatitis.csv -> build/lib/pymc3/examples/data copying pymc3/examples/data/radon.csv -> build/lib/pymc3/examples/data copying pymc3/examples/data/rugby.csv -> build/lib/pymc3/examples/data copying pymc3/examples/data/srrs2.dat -> build/lib/pymc3/examples/data copying pymc3/examples/data/stock_prices.csv -> build/lib/pymc3/examples/data copying pymc3/examples/data/test_scores.csv -> build/lib/pymc3/examples/data copying pymc3/examples/data/wells.dat -> build/lib/pymc3/examples/data creating build/lib/pymc3/examples/data/pmf copying pymc3/examples/data/pmf/jester-dataset-v1-dense-first-1000.csv -> build/lib/pymc3/examples/data/pmf copying pymc3/examples/data/pmf/jokes.json -> build/lib/pymc3/examples/data/pmf creating build/lib/pymc3/examples/data/pmf/6bb8d06c69c0666e6da14c094d4320d115f1ffc8 copying pymc3/examples/data/pmf/6bb8d06c69c0666e6da14c094d4320d115f1ffc8/shapes.json -> build/lib/pymc3/examples/data/pmf/6bb8d06c69c0666e6da14c094d4320d115f1ffc8 copying pymc3/examples/data/pmf/6bb8d06c69c0666e6da14c094d4320d115f1ffc8/test.txt -> build/lib/pymc3/examples/data/pmf/6bb8d06c69c0666e6da14c094d4320d115f1ffc8 copying pymc3/examples/data/pmf/6bb8d06c69c0666e6da14c094d4320d115f1ffc8/train.txt -> build/lib/pymc3/examples/data/pmf/6bb8d06c69c0666e6da14c094d4320d115f1ffc8 -------------------------------------------------------------------------------- -- Phase: run-depends -------------------------------------------------------------------------------- ===> py27-pymc3-3.3 depends on package: py27-h5py>=2.7.0 - not found ===> Installing existing package /packages/All/py27-h5py-2.7.1_1.txz Installing py27-h5py-2.7.1_1... `-- Installing hdf5-1.10.1_1... | `-- Installing hdf-szip-2.1_2... | `-- Extracting hdf-szip-2.1_2: ........ done `-- Extracting hdf5-1.10.1_1: .......... done `-- Installing py27-numpy-1.13.3_2,1... | `-- Installing gcc5-5.5.0_2... | | `-- Installing binutils-2.30_2,1... | | `-- Extracting binutils-2.30_2,1: .......... done | | `-- Installing gmp-6.1.2... | | `-- Extracting gmp-6.1.2: .......... done | | `-- Installing mpc-1.1.0... | | `-- Installing mpfr-3.1.6... | | `-- Extracting mpfr-3.1.6: .......... done | | `-- Extracting mpc-1.1.0: ...... done | `-- Extracting gcc5-5.5.0_2: .......... done | `-- Installing openblas-0.2.20_2,1... | `-- Extracting openblas-0.2.20_2,1: ......... done | `-- Installing suitesparse-4.0.2_8... | `-- Extracting suitesparse-4.0.2_8: .......... done `-- Extracting py27-numpy-1.13.3_2,1: .......... done `-- Installing py27-six-1.11.0... `-- Extracting py27-six-1.11.0: .......... done Extracting py27-h5py-2.7.1_1: .......... done Message from gcc5-5.5.0_2: To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc5 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===> NOTICE: This port is deprecated; you may wish to reconsider installing it: Unsupported by upstream. Use GCC 6 or newer instead.. ===> py27-pymc3-3.3 depends on package: py27-h5py>=2.7.0 - found ===> Returning to build of py27-pymc3-3.3 ===> py27-pymc3-3.3 depends on package: py27-joblib>=0.9 - not found ===> Installing existing package /packages/All/py27-joblib-0.9.4.txz Installing py27-joblib-0.9.4... Extracting py27-joblib-0.9.4: .......... done ===> py27-pymc3-3.3 depends on package: py27-joblib>=0.9 - found ===> Returning to build of py27-pymc3-3.3 ===> py27-pymc3-3.3 depends on package: py27-pandas>=0.18.0 - not found ===> Installing existing package /packages/All/py27-pandas-0.22.0_1.txz Installing py27-pandas-0.22.0_1... `-- Installing py27-bottleneck-1.2.1_3... `-- Extracting py27-bottleneck-1.2.1_3: .......... done `-- Installing py27-dateutil-2.6.1... `-- Extracting py27-dateutil-2.6.1: .......... done `-- Installing py27-numexpr-2.6.4_1... `-- Extracting py27-numexpr-2.6.4_1: .......... done `-- Installing py27-pytz-2018.3,1... `-- Extracting py27-pytz-2018.3,1: .......... done `-- Installing py27-sqlite3-2.7.14_7... | `-- Installing sqlite3-3.22.0_1... | `-- Extracting sqlite3-3.22.0_1: .......... done `-- Extracting py27-sqlite3-2.7.14_7: ........ done Extracting py27-pandas-0.22.0_1: .......... done Message from py27-pandas-0.22.0_1: === If you wish, install math/py-statsmodels to enable parts of pandas.stats. === ===> py27-pymc3-3.3 depends on package: py27-pandas>=0.18.0 - found ===> Returning to build of py27-pymc3-3.3 ===> py27-pymc3-3.3 depends on package: py27-patsy>=0.4.0 - not found ===> Installing existing package /packages/All/py27-patsy-0.5.0_1.txz Installing py27-patsy-0.5.0_1... Extracting py27-patsy-0.5.0_1: .......... done ===> py27-pymc3-3.3 depends on package: py27-patsy>=0.4.0 - found ===> Returning to build of py27-pymc3-3.3 ===> py27-pymc3-3.3 depends on package: py27-six>=1.10.0 - found ===> py27-pymc3-3.3 depends on package: py27-theano>=1.0.0 - not found ===> Installing existing package /packages/All/py27-theano-1.0.1.txz Installing py27-theano-1.0.1... `-- Installing py27-scipy-0.19.0_5... `-- Extracting py27-scipy-0.19.0_5: .......... done Extracting py27-theano-1.0.1: .......... done Message from py27-theano-1.0.1: To use Theano in multi-threaded mode, install OpenBLAS with option OPENMP enabled, install py-numpy with OpenBLAS support and use this minimal ~/.theanorc: --------------------------- [global] cxx = c++ openmp = True [blas] ldflags = -lopenblasp --------------------------- You can control the number of threads used with OMP_NUM_THREADS environment variable. ===> py27-pymc3-3.3 depends on package: py27-theano>=1.0.0 - found ===> Returning to build of py27-pymc3-3.3 ===> py27-pymc3-3.3 depends on package: py27-tqdm>=4.8.4 - not found ===> Installing existing package /packages/All/py27-tqdm-4.19.6.txz Installing py27-tqdm-4.19.6... Extracting py27-tqdm-4.19.6: .......... done ===> py27-pymc3-3.3 depends on package: py27-tqdm>=4.8.4 - found ===> Returning to build of py27-pymc3-3.3 ===> py27-pymc3-3.3 depends on package: py27-setuptools>0 - found ===> py27-pymc3-3.3 depends on file: /usr/local/bin/python2.7 - found ===> py27-pymc3-3.3 depends on package: py27-enum34>=1.1.6 - not found ===> Installing existing package /packages/All/py27-enum34-1.1.6.txz Installing py27-enum34-1.1.6... Extracting py27-enum34-1.1.6: .......... done ===> py27-pymc3-3.3 depends on package: py27-enum34>=1.1.6 - found ===> Returning to build of py27-pymc3-3.3 -------------------------------------------------------------------------------- -- Phase: stage -------------------------------------------------------------------------------- ===> Staging for py27-pymc3-3.3 ===> Generating temporary packing list running install running build running build_py running egg_info writing requirements to pymc3.egg-info/requires.txt writing pymc3.egg-info/PKG-INFO writing top-level names to pymc3.egg-info/top_level.txt writing dependency_links to pymc3.egg-info/dependency_links.txt reading manifest file 'pymc3.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*' under directory 'source' writing manifest file 'pymc3.egg-info/SOURCES.txt' running install_lib creating /construction/math/py-pymc3/stage/usr/local/lib/python2.7 creating /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages creating /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3 copying build/lib/pymc3/vartypes.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3 copying build/lib/pymc3/util.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3 creating /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/variational copying build/lib/pymc3/variational/operators.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/variational copying build/lib/pymc3/variational/flows.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/variational copying build/lib/pymc3/variational/__init__.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/variational copying build/lib/pymc3/variational/updates.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/variational copying build/lib/pymc3/variational/test_functions.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/variational copying build/lib/pymc3/variational/stein.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/variational copying build/lib/pymc3/variational/opvi.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/variational copying build/lib/pymc3/variational/approximations.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/variational copying build/lib/pymc3/variational/callbacks.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/variational copying build/lib/pymc3/variational/inference.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/variational creating /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/glm copying build/lib/pymc3/glm/utils.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/glm copying build/lib/pymc3/glm/__init__.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/glm copying build/lib/pymc3/glm/linear.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/glm copying build/lib/pymc3/glm/families.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/glm copying build/lib/pymc3/stats.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3 creating /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_distributions_timeseries.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_variational_inference.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_special_functions.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_shared.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_model.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_pickling.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_random.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_examples.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_transforms.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_hmc.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_tracetab.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_models_linear.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_smc.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_types.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_dist_math.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_model_func.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/helpers.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_missing.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/backend_fixtures.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_glm.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_gp.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_profile.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_posdef_sym.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_minibatches.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_sampling.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_modelcontext.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_step.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_sgfs.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_theanof.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_quadpotential.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_distribution_defaults.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_stats.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_text_backend.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_models_utils.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_distributions_random.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_ndarray_backend.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/conftest.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_hdf5_backend.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_distributions.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/models.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_plots.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_model_helpers.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_memo.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_tuning.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_diagnostics.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_mixture.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/sampler_fixtures.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/checks.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_updates.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_util.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_sqlite_backend.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/__init__.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_starting.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_math.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests copying build/lib/pymc3/tests/test_posteriors.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests creating /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/backends copying build/lib/pymc3/backends/__init__.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/backends copying build/lib/pymc3/backends/text.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/backends copying build/lib/pymc3/backends/smc_text.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/backends copying build/lib/pymc3/backends/ndarray.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/backends copying build/lib/pymc3/backends/report.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/backends copying build/lib/pymc3/backends/hdf5.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/backends copying build/lib/pymc3/backends/tracetab.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/backends copying build/lib/pymc3/backends/base.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/backends copying build/lib/pymc3/backends/sqlite.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/backends creating /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/distributions copying build/lib/pymc3/distributions/mixture.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/distributions copying build/lib/pymc3/distributions/discrete.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/distributions copying build/lib/pymc3/distributions/bound.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/distributions copying build/lib/pymc3/distributions/multivariate.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/distributions copying build/lib/pymc3/distributions/transforms.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/distributions copying build/lib/pymc3/distributions/continuous.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/distributions copying build/lib/pymc3/distributions/dist_math.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/distributions copying build/lib/pymc3/distributions/__init__.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/distributions copying build/lib/pymc3/distributions/distribution.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/distributions copying build/lib/pymc3/distributions/timeseries.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/distributions copying build/lib/pymc3/distributions/special.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/distributions copying build/lib/pymc3/model.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3 copying build/lib/pymc3/blocking.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3 creating /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tuning copying build/lib/pymc3/tuning/__init__.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tuning copying build/lib/pymc3/tuning/scaling.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tuning copying build/lib/pymc3/tuning/starting.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tuning copying build/lib/pymc3/__init__.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3 copying build/lib/pymc3/data.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3 creating /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples copying build/lib/pymc3/examples/custom_dists.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples copying build/lib/pymc3/examples/censored_data.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples copying build/lib/pymc3/examples/baseball.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples copying build/lib/pymc3/examples/gelman_schools.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples copying build/lib/pymc3/examples/disaster_model_theano_op.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples copying build/lib/pymc3/examples/LKJ_correlation.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples copying build/lib/pymc3/examples/__init__.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples copying build/lib/pymc3/examples/disaster_model.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples copying build/lib/pymc3/examples/factor_potential.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples copying build/lib/pymc3/examples/samplers_mvnormal.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples copying build/lib/pymc3/examples/gelman_bioassay.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples copying build/lib/pymc3/examples/simpletest.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples copying build/lib/pymc3/examples/lightspeed_example.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples copying build/lib/pymc3/examples/GHME_2013.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples copying build/lib/pymc3/examples/lasso_missing.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples copying build/lib/pymc3/examples/arbitrary_stochastic.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples copying build/lib/pymc3/examples/garch_example.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples copying build/lib/pymc3/examples/arma_example.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples creating /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples/data copying build/lib/pymc3/examples/data/wells.dat -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples/data copying build/lib/pymc3/examples/data/extrahard_MC_500_5_4_reference_classes.npy -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples/data copying build/lib/pymc3/examples/data/srrs2.dat -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples/data creating /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples/data/pmf copying build/lib/pymc3/examples/data/pmf/jester-dataset-v1-dense-first-1000.csv -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples/data/pmf copying build/lib/pymc3/examples/data/pmf/jokes.json -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples/data/pmf creating /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples/data/pmf/6bb8d06c69c0666e6da14c094d4320d115f1ffc8 copying build/lib/pymc3/examples/data/pmf/6bb8d06c69c0666e6da14c094d4320d115f1ffc8/test.txt -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples/data/pmf/6bb8d06c69c0666e6da14c094d4320d115f1ffc8 copying build/lib/pymc3/examples/data/pmf/6bb8d06c69c0666e6da14c094d4320d115f1ffc8/train.txt -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples/data/pmf/6bb8d06c69c0666e6da14c094d4320d115f1ffc8 copying build/lib/pymc3/examples/data/pmf/6bb8d06c69c0666e6da14c094d4320d115f1ffc8/shapes.json -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples/data/pmf/6bb8d06c69c0666e6da14c094d4320d115f1ffc8 copying build/lib/pymc3/examples/data/SP500.csv -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples/data copying build/lib/pymc3/examples/data/HtWt.csv -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples/data copying build/lib/pymc3/examples/data/cty.dat -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples/data copying build/lib/pymc3/examples/data/rugby.csv -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples/data copying build/lib/pymc3/examples/data/pancreatitis.csv -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples/data copying build/lib/pymc3/examples/data/radon.csv -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples/data copying build/lib/pymc3/examples/data/efron-morris-75-data.tsv -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples/data copying build/lib/pymc3/examples/data/test_scores.csv -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples/data copying build/lib/pymc3/examples/data/extrahard_MC_500_5_4.npz.npy -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples/data copying build/lib/pymc3/examples/data/stock_prices.csv -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples/data copying build/lib/pymc3/examples/data/milk.csv -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples/data copying build/lib/pymc3/examples/data/monthly_in_situ_co2_mlo.csv -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples/data copying build/lib/pymc3/examples/data/Guber1999data.txt -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/examples/data copying build/lib/pymc3/math.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3 creating /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/external copying build/lib/pymc3/external/__init__.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/external copying build/lib/pymc3/theanof.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3 copying build/lib/pymc3/memoize.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3 copying build/lib/pymc3/diagnostics.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3 creating /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/gp copying build/lib/pymc3/gp/util.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/gp copying build/lib/pymc3/gp/__init__.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/gp copying build/lib/pymc3/gp/cov.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/gp copying build/lib/pymc3/gp/mean.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/gp copying build/lib/pymc3/gp/gp.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/gp copying build/lib/pymc3/exceptions.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3 copying build/lib/pymc3/sampling.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3 creating /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/plots copying build/lib/pymc3/plots/__init__.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/plots copying build/lib/pymc3/plots/artists.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/plots copying build/lib/pymc3/plots/kdeplot.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/plots copying build/lib/pymc3/plots/posteriorplot.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/plots copying build/lib/pymc3/plots/energyplot.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/plots copying build/lib/pymc3/plots/autocorrplot.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/plots copying build/lib/pymc3/plots/traceplot.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/plots copying build/lib/pymc3/plots/densityplot.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/plots copying build/lib/pymc3/plots/compareplot.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/plots copying build/lib/pymc3/plots/utils.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/plots copying build/lib/pymc3/plots/forestplot.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/plots creating /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/step_methods creating /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/step_methods/hmc copying build/lib/pymc3/step_methods/hmc/quadpotential.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/step_methods/hmc copying build/lib/pymc3/step_methods/hmc/hmc.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/step_methods/hmc copying build/lib/pymc3/step_methods/hmc/nuts.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/step_methods/hmc copying build/lib/pymc3/step_methods/hmc/integration.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/step_methods/hmc copying build/lib/pymc3/step_methods/hmc/trajectory.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/step_methods/hmc copying build/lib/pymc3/step_methods/hmc/base_hmc.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/step_methods/hmc copying build/lib/pymc3/step_methods/hmc/__init__.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/step_methods/hmc copying build/lib/pymc3/step_methods/__init__.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/step_methods copying build/lib/pymc3/step_methods/slicer.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/step_methods copying build/lib/pymc3/step_methods/compound.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/step_methods copying build/lib/pymc3/step_methods/smc.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/step_methods copying build/lib/pymc3/step_methods/sgmcmc.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/step_methods copying build/lib/pymc3/step_methods/gibbs.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/step_methods copying build/lib/pymc3/step_methods/elliptical_slice.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/step_methods copying build/lib/pymc3/step_methods/metropolis.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/step_methods copying build/lib/pymc3/step_methods/step_sizes.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/step_methods copying build/lib/pymc3/step_methods/arraystep.py -> /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/step_methods byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/vartypes.py to vartypes.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/util.py to util.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/variational/operators.py to operators.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/variational/flows.py to flows.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/variational/__init__.py to __init__.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/variational/updates.py to updates.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/variational/test_functions.py to test_functions.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/variational/stein.py to stein.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/variational/opvi.py to opvi.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/variational/approximations.py to approximations.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/variational/callbacks.py to callbacks.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/variational/inference.py to inference.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/glm/utils.py to utils.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/glm/__init__.py to __init__.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/glm/linear.py to linear.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/glm/families.py to families.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/stats.py to stats.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_distributions_timeseries.py to test_distributions_timeseries.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_variational_inference.py to test_variational_inference.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_special_functions.py to test_special_functions.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_shared.py to test_shared.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_model.py to test_model.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_pickling.py to test_pickling.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_random.py to test_random.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_examples.py to test_examples.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_transforms.py to test_transforms.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_hmc.py to test_hmc.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_tracetab.py to test_tracetab.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_models_linear.py to test_models_linear.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_smc.py to test_smc.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_types.py to test_types.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_dist_math.py to test_dist_math.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_model_func.py to test_model_func.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/helpers.py to helpers.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_missing.py to test_missing.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/backend_fixtures.py to backend_fixtures.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_glm.py to test_glm.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_gp.py to test_gp.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_profile.py to test_profile.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_posdef_sym.py to test_posdef_sym.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_minibatches.py to test_minibatches.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_sampling.py to test_sampling.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_modelcontext.py to test_modelcontext.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_step.py to test_step.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_sgfs.py to test_sgfs.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_theanof.py to test_theanof.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_quadpotential.py to test_quadpotential.pyc byte-compiling 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conftest.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_hdf5_backend.py to test_hdf5_backend.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_distributions.py to test_distributions.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/models.py to models.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_plots.py to test_plots.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_model_helpers.py to test_model_helpers.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_memo.py to test_memo.pyc byte-compiling /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/tests/test_tuning.py to test_tuning.pyc byte-compiling 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/construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3/step_methods/arraystep.py to arraystep.pyc writing byte-compilation script '/tmp/tmp7al1Cg.py' /usr/local/bin/python2.7 -O /tmp/tmp7al1Cg.py removing /tmp/tmp7al1Cg.py running install_egg_info Copying pymc3.egg-info to /construction/math/py-pymc3/stage/usr/local/lib/python2.7/site-packages/pymc3-3.3-py2.7.egg-info running install_scripts writing list of installed files to '/construction/math/py-pymc3/.PLIST.pymodtmp' ===> Creating unique files: Move MAN files needing SUFFIX ===> Creating unique files: Move files needing SUFFIX ====> Compressing man pages (compress-man) -------------------------------------------------------------------------------- -- Phase: package -------------------------------------------------------------------------------- ===> Building package for py27-pymc3-3.3 file sizes/checksums [500]: ..... done packing files [500]: ..... done packing directories [0]: . done -------------------------------------------------- -- Termination -------------------------------------------------- Finished: Thursday, 19 APR 2018 at 01:26:50 UTC Duration: 00:00:31