=> Building biology/libsbml Started : Thursday, 30 AUG 2018 at 10:55:08 UTC Platform: 5.3-DEVELOPMENT DragonFly 5.3-DEVELOPMENT #140: Wed Aug 29 22:06:30 PDT 2018 root@test.backplane.com:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 -------------------------------------------------- -- Environment -------------------------------------------------- UNAME_r=5.3-SYNTH UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=DragonFly 5.3-SYNTH UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 TERM=dumb PKG_CACHEDIR=/var/cache/pkg8 PKG_DBDIR=/var/db/pkg8 PORTSDIR=/xports LANG=C HOME=/root USER=root -------------------------------------------------- -- Options -------------------------------------------------- ===> The following configuration options are available for libsbml-5.17.0: EXAMPLES=on: Build and/or install examples PYTHON=off: Python bindings or support RUBY=off: Ruby bindings or support ===> Use 'make config' to modify these settings -------------------------------------------------- -- CONFIGURE_ENV -------------------------------------------------- XDG_DATA_HOME=/construction/biology/libsbml XDG_CONFIG_HOME=/construction/biology/libsbml HOME=/construction/biology/libsbml TMPDIR="/tmp" PATH=/construction/biology/libsbml/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc50 -------------------------------------------------- -- CONFIGURE_ARGS -------------------------------------------------- -------------------------------------------------- -- MAKE_ENV -------------------------------------------------- XDG_DATA_HOME=/construction/biology/libsbml XDG_CONFIG_HOME=/construction/biology/libsbml HOME=/construction/biology/libsbml TMPDIR="/tmp" PATH=/construction/biology/libsbml/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc50 PREFIX=/usr/local LOCALBASE=/usr/local NOPROFILE=1 CC="cc" CFLAGS="-pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing" CPP="cpp" CPPFLAGS="-DLIBICONV_PLUG" LDFLAGS=" -L/usr/lib" LIBS="" CXX="c++" CXXFLAGS=" -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" -------------------------------------------------- -- MAKE_ARGS -------------------------------------------------- DESTDIR=/construction/biology/libsbml/stage -------------------------------------------------- -- PLIST_SUB -------------------------------------------------- PORTVERSION=5.17.0 PORTDOCS="" PORTEXAMPLES="" EXAMPLES="" NO_EXAMPLES="@comment " PYTHON="@comment " NO_PYTHON="" RUBY="@comment " NO_RUBY="" CMAKE_BUILD_TYPE="release" GTK2_VERSION="2.10.0" GTK3_VERSION="3.0.0" OSREL=5.3 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/libsbml" EXAMPLESDIR="share/examples/libsbml" DATADIR="share/libsbml" WWWDIR="www/libsbml" ETCDIR="etc/libsbml" -------------------------------------------------- -- SUB_LIST -------------------------------------------------- EXAMPLES="" NO_EXAMPLES="@comment " PYTHON="@comment " NO_PYTHON="" RUBY="@comment " NO_RUBY="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/libsbml DOCSDIR=/usr/local/share/doc/libsbml EXAMPLESDIR=/usr/local/share/examples/libsbml WWWDIR=/usr/local/www/libsbml ETCDIR=/usr/local/etc/libsbml -------------------------------------------------- -- /etc/make.conf -------------------------------------------------- SYNTHPROFILE=LiveSystem USE_PACKAGE_DEPENDS_ONLY=yes PACKAGE_BUILDING=yes BATCH=yes PKG_CREATE_VERBOSE=yes PORTSDIR=/xports DISTDIR=/distfiles WRKDIRPREFIX=/construction PORT_DBDIR=/options PACKAGES=/packages MAKE_JOBS_NUMBER_LIMIT=12 _ALTCCVERSION_921dbbb2=none _OBJC_ALTCCVERSION_921dbbb2=none _SMP_CPUS=32 UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=500316 OSVERSION=9999999 OSREL=5.3 _OSRELEASE=5.3-SYNTH PYTHONBASE=/usr/local _PKG_CHECKED=1 -------------------------------------------------------------------------------- -- Phase: check-sanity -------------------------------------------------------------------------------- ===> NOTICE: The libsbml port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License LGPL21 accepted by the user -------------------------------------------------------------------------------- -- Phase: pkg-depends -------------------------------------------------------------------------------- ===> libsbml-5.17.0 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.10.5_1.txz Installing pkg-1.10.5_1... Extracting pkg-1.10.5_1: .......... done ===> libsbml-5.17.0 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of libsbml-5.17.0 -------------------------------------------------------------------------------- -- Phase: fetch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: fetch -------------------------------------------------------------------------------- ===> NOTICE: The libsbml port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License LGPL21 accepted by the user ===> Fetching all distfiles required by libsbml-5.17.0 for building -------------------------------------------------------------------------------- -- Phase: checksum -------------------------------------------------------------------------------- ===> NOTICE: The libsbml port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License LGPL21 accepted by the user ===> Fetching all distfiles required by libsbml-5.17.0 for building => SHA256 Checksum OK for libSBML-5.17.0-core-src.tar.gz. -------------------------------------------------------------------------------- -- Phase: extract-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: extract -------------------------------------------------------------------------------- ===> NOTICE: The libsbml port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License LGPL21 accepted by the user ===> Fetching all distfiles required by libsbml-5.17.0 for building ===> Extracting for libsbml-5.17.0 => SHA256 Checksum OK for libSBML-5.17.0-core-src.tar.gz. -------------------------------------------------------------------------------- -- Phase: patch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: patch -------------------------------------------------------------------------------- ===> Patching for libsbml-5.17.0 -------------------------------------------------------------------------------- -- Phase: build-depends -------------------------------------------------------------------------------- ===> libsbml-5.17.0 depends on file: /usr/local/bin/cmake - not found ===> Installing existing package /packages/All/cmake-3.11.4_1.txz Installing cmake-3.11.4_1... `-- Installing curl-7.60.0... | `-- Installing ca_root_nss-3.38... | `-- Extracting ca_root_nss-3.38: ........ done | `-- Installing krb5-1.16.1_5... | | `-- Installing gettext-runtime-0.19.8.1_1... | | `-- Installing indexinfo-0.3.1... | | `-- Extracting indexinfo-0.3.1: .... done | | `-- Extracting gettext-runtime-0.19.8.1_1: .......... done | | `-- Installing libressl-2.7.4... | | `-- Extracting libressl-2.7.4: .......... done | | `-- Installing pkgconf-1.4.2,1... | | `-- Extracting pkgconf-1.4.2,1: .......... done | | `-- Installing readline-7.0.3_1... | | `-- Installing ncurses-6.0.0s20171223_1... | | `-- Extracting ncurses-6.0.0s20171223_1: .......... done | | `-- Extracting readline-7.0.3_1: .......... done | `-- Extracting krb5-1.16.1_5: .......... done | `-- Installing libnghttp2-1.32.0... | `-- Extracting libnghttp2-1.32.0: .......... done `-- Extracting curl-7.60.0: .......... done `-- Installing expat-2.2.5... `-- Extracting expat-2.2.5: .......... done `-- Installing jsoncpp-1.8.1_3... `-- Extracting jsoncpp-1.8.1_3: .......... done `-- Installing libarchive-3.3.2,1... | `-- Installing liblz4-1.8.2,1... | `-- Extracting liblz4-1.8.2,1: .......... done | `-- Installing lzo2-2.10_1... | `-- Extracting lzo2-2.10_1: .......... done `-- Extracting libarchive-3.3.2,1: .......... done `-- Installing libuv-1.21.0... `-- Extracting libuv-1.21.0: .......... done `-- Installing rhash-1.3.5... `-- Extracting rhash-1.3.5: .......... done Extracting cmake-3.11.4_1: .......... done Message from ca_root_nss-3.38: ********************************* WARNING ********************************* FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. *********************************** NOTE ********************************** This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem *************************************************************************** ===> libsbml-5.17.0 depends on file: /usr/local/bin/cmake - found ===> Returning to build of libsbml-5.17.0 -------------------------------------------------------------------------------- -- Phase: lib-depends -------------------------------------------------------------------------------- ===> libsbml-5.17.0 depends on shared library: libxml2.so - not found ===> Installing existing package /packages/All/libxml2-2.9.7.txz Installing libxml2-2.9.7... Extracting libxml2-2.9.7: .......... done ===> libsbml-5.17.0 depends on shared library: libxml2.so - found (/usr/local/lib/libxml2.so) ===> Returning to build of libsbml-5.17.0 -------------------------------------------------------------------------------- -- Phase: configure -------------------------------------------------------------------------------- ===> Configuring for libsbml-5.17.0 ===> Performing out-of-source build /bin/mkdir -p /construction/biology/libsbml/.build -- The C compiler identification is GNU 5.4.1 -- The CXX compiler identification is GNU 5.4.1 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compile features -- Detecting C compile features - done -- Could NOT find SWIG (missing: SWIG_EXECUTABLE SWIG_DIR) -- Looking for BZ2_bzCompressInit in /usr/lib/libbz2.so -- Looking for BZ2_bzCompressInit in /usr/lib/libbz2.so - found -- Looking for gzopen in /usr/lib/libz.so -- Looking for gzopen in /usr/lib/libz.so - found -- Looking for include file check.h -- Looking for include file check.h - not found -- Looking for include file expat.h -- Looking for include file expat.h - not found -- Looking for include file errno.h -- Looking for include file errno.h - found -- Looking for include file ieeefp.h -- Looking for include file ieeefp.h - found -- Looking for include file math.h -- Looking for include file math.h - found -- Looking for include file sys/types.h -- Looking for include file sys/types.h - found -- Looking for include file float.h -- Looking for include file float.h - found -- Check if the system is big endian -- Searching 16 bit integer -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- Looking for sqrt in m -- Looking for sqrt in m - found -- ---------------------------------------------------------------------- libSBML version 5.17.0 ---------------------------------------------------------------------- More information and the latest version are available online at http://sbml.org/Software/libSBML Please report problems using the issue tracker at http://sbml.org/Software/libsbml/issue-tracker To contact the developers directly, email libsbml-team@googlegroups.com Configured on host 'test.backplane.com' host type = DragonFly host operating system = DragonFly 5.3-SYNTH host CPU architecture = x86_64 General build flags: CC = /usr/bin/cc CXX = /usr/bin/c++ CPPFLAGS = -DLINUX CFLAGS = -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fno-strict-aliasing -fPIC CXXFLAGS = -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC LDFLAGS = -L/usr/lib XML parser library configuration: XML library = libxml2 CPPFLAGS for XML = -I/usr/local/include/libxml2 LIBS for XML = /usr/local/lib/libxml2.so Other libSBML configuration settings: Installation $prefix = /usr/local -- Value of $LD_LIBRARY_PATH = -- Using SWIG = SWIG_EXECUTABLE-NOTFOUND (Version ) -- Using C++ namespace ('libsbml') = no -- -- Build examples = no -- -- Use Legacy Math = no -- -- Support for SBML Level 3 Packages: -- SBML 'layout' package = OFF -- -- Other potentially important settings: -- Compression support is enabled for .zip and .gz files -- Compression support is enabled for .bz2 files -- ---------------------------------------------------------------------- -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_CXX_FLAGS_DEBUG CMAKE_C_FLAGS_DEBUG CMAKE_MODULE_LINKER_FLAGS ICONV_INCLUDE_DIR ICONV_LIBRARIES ICONV_LIBRARY LIBICONV_INCLUDE_DIR LIBICONV_LIBRARIES LIBICONV_LIBRARY THREADS_HAVE_PTHREAD_ARG -- Build files have been written to: /construction/biology/libsbml/.build -------------------------------------------------------------------------------- -- Phase: build -------------------------------------------------------------------------------- ===> Building for libsbml-5.17.0 /usr/local/bin/cmake -H/construction/biology/libsbml/libsbml-5.17.0 -B/construction/biology/libsbml/.build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/local/bin/cmake -E cmake_progress_start /construction/biology/libsbml/.build/CMakeFiles /construction/biology/libsbml/.build/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all --- src/CMakeFiles/sbml.dir/all --- --- src/CMakeFiles/sbml-static.dir/all --- --- src/CMakeFiles/sbml.dir/all --- /usr/bin/make -f src/CMakeFiles/sbml.dir/build.make src/CMakeFiles/sbml.dir/depend --- src/CMakeFiles/sbml-static.dir/all --- /usr/bin/make -f src/CMakeFiles/sbml-static.dir/build.make src/CMakeFiles/sbml-static.dir/depend --- src/CMakeFiles/sbml.dir/all --- --- src/CMakeFiles/sbml.dir/depend --- --- src/CMakeFiles/sbml-static.dir/all --- --- src/CMakeFiles/sbml-static.dir/depend --- --- src/CMakeFiles/sbml.dir/all --- cd /construction/biology/libsbml/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/biology/libsbml/libsbml-5.17.0 /construction/biology/libsbml/libsbml-5.17.0/src /construction/biology/libsbml/.build /construction/biology/libsbml/.build/src /construction/biology/libsbml/.build/src/CMakeFiles/sbml.dir/DependInfo.cmake --- src/CMakeFiles/sbml-static.dir/all --- cd /construction/biology/libsbml/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/biology/libsbml/libsbml-5.17.0 /construction/biology/libsbml/libsbml-5.17.0/src /construction/biology/libsbml/.build /construction/biology/libsbml/.build/src /construction/biology/libsbml/.build/src/CMakeFiles/sbml-static.dir/DependInfo.cmake --- src/CMakeFiles/sbml.dir/all --- Scanning dependencies of target sbml /usr/bin/make -f src/CMakeFiles/sbml.dir/build.make src/CMakeFiles/sbml.dir/build --- src/CMakeFiles/sbml-static.dir/all --- Scanning dependencies of target sbml-static /usr/bin/make -f src/CMakeFiles/sbml-static.dir/build.make src/CMakeFiles/sbml-static.dir/build --- src/CMakeFiles/sbml.dir/all --- --- src/CMakeFiles/sbml.dir/sbml/annotation/CVTerm.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/annotation/Date.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/annotation/ModelCreator.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/annotation/ModelHistory.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/annotation/RDFAnnotationParser.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/common/libsbml-version.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/common/operationReturnValues.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/conversion/ConversionOption.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/conversion/ConversionProperties.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/conversion/RegisterConverters.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/conversion/SBMLConverter.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/annotation/CVTerm.cpp.o --- [ 0%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/CVTerm.cpp.o --- src/CMakeFiles/sbml.dir/sbml/annotation/ModelCreator.cpp.o --- [ 0%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/ModelCreator.cpp.o --- src/CMakeFiles/sbml.dir/sbml/annotation/Date.cpp.o --- [ 0%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/Date.cpp.o --- src/CMakeFiles/sbml.dir/sbml/common/operationReturnValues.cpp.o --- [ 0%] Building CXX object src/CMakeFiles/sbml.dir/sbml/common/operationReturnValues.cpp.o --- src/CMakeFiles/sbml.dir/sbml/annotation/CVTerm.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/annotation/CVTerm.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/annotation/CVTerm.cpp --- src/CMakeFiles/sbml.dir/sbml/conversion/ConversionOption.cpp.o --- [ 0%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/ConversionOption.cpp.o --- src/CMakeFiles/sbml.dir/sbml/annotation/ModelCreator.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/annotation/ModelCreator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/annotation/ModelCreator.cpp --- src/CMakeFiles/sbml.dir/sbml/annotation/Date.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/annotation/Date.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/annotation/Date.cpp --- src/CMakeFiles/sbml.dir/sbml/conversion/SBMLConverter.cpp.o --- [ 0%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLConverter.cpp.o --- src/CMakeFiles/sbml.dir/sbml/common/operationReturnValues.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/common/operationReturnValues.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/common/operationReturnValues.cpp --- src/CMakeFiles/sbml.dir/sbml/conversion/ConversionOption.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/ConversionOption.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/ConversionOption.cpp --- src/CMakeFiles/sbml.dir/sbml/conversion/ConversionProperties.cpp.o --- [ 0%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/ConversionProperties.cpp.o --- src/CMakeFiles/sbml.dir/sbml/conversion/SBMLConverter.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLConverter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/SBMLConverter.cpp --- src/CMakeFiles/sbml.dir/sbml/annotation/ModelHistory.cpp.o --- [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/ModelHistory.cpp.o --- src/CMakeFiles/sbml.dir/sbml/conversion/RegisterConverters.cpp.o --- [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/RegisterConverters.cpp.o --- src/CMakeFiles/sbml.dir/sbml/conversion/ConversionProperties.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/ConversionProperties.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/ConversionProperties.cpp --- src/CMakeFiles/sbml.dir/sbml/annotation/RDFAnnotationParser.cpp.o --- [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/RDFAnnotationParser.cpp.o --- src/CMakeFiles/sbml.dir/sbml/annotation/ModelHistory.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/annotation/ModelHistory.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/annotation/ModelHistory.cpp --- src/CMakeFiles/sbml.dir/sbml/conversion/RegisterConverters.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/RegisterConverters.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/RegisterConverters.cpp --- src/CMakeFiles/sbml.dir/sbml/annotation/RDFAnnotationParser.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/annotation/RDFAnnotationParser.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/annotation/RDFAnnotationParser.cpp --- src/CMakeFiles/sbml.dir/sbml/common/libsbml-version.cpp.o --- [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/common/libsbml-version.cpp.o --- src/CMakeFiles/sbml-static.dir/all --- --- src/CMakeFiles/sbml-static.dir/sbml/annotation/CVTerm.cpp.o --- --- src/CMakeFiles/sbml.dir/all --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/common/libsbml-version.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/common/libsbml-version.cpp --- src/CMakeFiles/sbml-static.dir/all --- [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/CVTerm.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/annotation/CVTerm.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/annotation/CVTerm.cpp --- src/CMakeFiles/sbml.dir/all --- --- src/CMakeFiles/sbml.dir/sbml/conversion/SBMLConverterRegistry.cpp.o --- [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLConverterRegistry.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLConverterRegistry.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/SBMLConverterRegistry.cpp --- src/CMakeFiles/sbml.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o --- [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/SBMLFunctionDefinitionConverter.cpp --- src/CMakeFiles/sbml.dir/sbml/conversion/SBMLIdConverter.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o --- [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/SBMLInferUnitsConverter.cpp --- src/CMakeFiles/sbml.dir/sbml/conversion/SBMLIdConverter.cpp.o --- [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLIdConverter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLIdConverter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/SBMLIdConverter.cpp --- src/CMakeFiles/sbml.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o --- [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/SBMLInitialAssignmentConverter.cpp --- src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o --- [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/SBMLLevel1Version1Converter.cpp --- src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o --- [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/SBMLLevelVersionConverter.cpp --- src/CMakeFiles/sbml-static.dir/all --- --- src/CMakeFiles/sbml-static.dir/sbml/annotation/Date.cpp.o --- [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/Date.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/annotation/Date.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/annotation/Date.cpp --- src/CMakeFiles/sbml.dir/all --- --- src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/conversion/SBMLRateOfConverter.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o --- [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o --- src/CMakeFiles/sbml.dir/sbml/conversion/SBMLRateOfConverter.cpp.o --- [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLRateOfConverter.cpp.o --- src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/SBMLLocalParameterConverter.cpp --- src/CMakeFiles/sbml.dir/sbml/conversion/SBMLRateOfConverter.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLRateOfConverter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/SBMLRateOfConverter.cpp --- src/CMakeFiles/sbml.dir/sbml/conversion/SBMLReactionConverter.cpp.o --- [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLReactionConverter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML 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-I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLRuleConverter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/SBMLRuleConverter.cpp --- src/CMakeFiles/sbml.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o --- [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/SBMLStripPackageConverter.cpp --- src/CMakeFiles/sbml.dir/sbml/conversion/SBMLUnitsConverter.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/extension/ASTBasePlugin.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/conversion/SBMLUnitsConverter.cpp.o --- [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLUnitsConverter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLUnitsConverter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/SBMLUnitsConverter.cpp --- src/CMakeFiles/sbml.dir/sbml/extension/ASTBasePlugin.cpp.o --- [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/ASTBasePlugin.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/ASTBasePlugin.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/extension/ASTBasePlugin.cpp --- src/CMakeFiles/sbml-static.dir/all --- --- src/CMakeFiles/sbml-static.dir/sbml/annotation/ModelCreator.cpp.o --- [ 5%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/ModelCreator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/annotation/ModelCreator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/annotation/ModelCreator.cpp --- src/CMakeFiles/sbml.dir/all --- --- src/CMakeFiles/sbml.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o --- [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/extension/ISBMLExtensionNamespaces.cpp --- src/CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPlugin.cpp.o --- [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPlugin.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPlugin.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/extension/SBMLDocumentPlugin.cpp --- src/CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o --- [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/extension/SBMLDocumentPluginNotRequired.cpp --- src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtension.cpp.o --- [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtension.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBMLExtension.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/extension/SBMLExtension.cpp --- src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionException.cpp.o --- [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionException.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionException.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/extension/SBMLExtensionException.cpp --- src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o --- [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/extension/SBMLExtensionNamespaces.cpp --- src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionRegistry.cpp.o --- [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionRegistry.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionRegistry.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/extension/SBMLExtensionRegistry.cpp --- src/CMakeFiles/sbml.dir/sbml/extension/SBaseExtensionPoint.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/extension/SBasePlugin.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/extension/SBaseExtensionPoint.cpp.o --- [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBaseExtensionPoint.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBaseExtensionPoint.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/extension/SBaseExtensionPoint.cpp --- src/CMakeFiles/sbml.dir/sbml/extension/SBasePlugin.cpp.o --- [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBasePlugin.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBasePlugin.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/extension/SBasePlugin.cpp --- src/CMakeFiles/sbml-static.dir/all --- --- src/CMakeFiles/sbml-static.dir/sbml/annotation/ModelHistory.cpp.o --- [ 7%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/ModelHistory.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/annotation/ModelHistory.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/annotation/ModelHistory.cpp --- src/CMakeFiles/sbml.dir/all --- --- src/CMakeFiles/sbml.dir/sbml/extension/SBasePluginCreatorBase.cpp.o --- [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBasePluginCreatorBase.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing 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/construction/biology/libsbml/libsbml-5.17.0/src/sbml/AlgebraicRule.cpp --- src/CMakeFiles/sbml.dir/sbml/AssignmentRule.cpp.o --- [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/AssignmentRule.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/AssignmentRule.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/AssignmentRule.cpp --- src/CMakeFiles/sbml.dir/sbml/Compartment.cpp.o --- [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Compartment.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/Compartment.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/Compartment.cpp --- src/CMakeFiles/sbml.dir/sbml/CompartmentType.cpp.o --- [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/CompartmentType.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ 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/construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/Constraint.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/Constraint.cpp --- src/CMakeFiles/sbml-static.dir/all --- [ 9%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/RDFAnnotationParser.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/annotation/RDFAnnotationParser.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/annotation/RDFAnnotationParser.cpp --- src/CMakeFiles/sbml.dir/all --- --- src/CMakeFiles/sbml.dir/sbml/Delay.cpp.o --- [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Delay.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/Delay.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/Delay.cpp --- src/CMakeFiles/sbml.dir/sbml/Event.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/EventAssignment.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/ExpectedAttributes.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/Event.cpp.o --- [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Event.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/Event.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/Event.cpp --- src/CMakeFiles/sbml.dir/sbml/EventAssignment.cpp.o --- [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/EventAssignment.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/EventAssignment.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/EventAssignment.cpp --- src/CMakeFiles/sbml.dir/sbml/ExpectedAttributes.cpp.o --- [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/ExpectedAttributes.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/ExpectedAttributes.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/ExpectedAttributes.cpp --- src/CMakeFiles/sbml.dir/sbml/FunctionDefinition.cpp.o --- [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/FunctionDefinition.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/FunctionDefinition.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/FunctionDefinition.cpp --- src/CMakeFiles/sbml.dir/sbml/InitialAssignment.cpp.o --- [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/InitialAssignment.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/InitialAssignment.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/InitialAssignment.cpp --- src/CMakeFiles/sbml.dir/sbml/KineticLaw.cpp.o --- [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/KineticLaw.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/KineticLaw.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/KineticLaw.cpp --- src/CMakeFiles/sbml.dir/sbml/ListOf.cpp.o --- [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/ListOf.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/ListOf.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/ListOf.cpp --- src/CMakeFiles/sbml.dir/sbml/LocalParameter.cpp.o --- [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/LocalParameter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/LocalParameter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/LocalParameter.cpp --- src/CMakeFiles/sbml.dir/sbml/Model.cpp.o --- [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Model.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/Model.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/Model.cpp --- src/CMakeFiles/sbml.dir/sbml/ModifierSpeciesReference.cpp.o --- [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/ModifierSpeciesReference.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/ModifierSpeciesReference.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/ModifierSpeciesReference.cpp --- src/CMakeFiles/sbml.dir/sbml/Parameter.cpp.o --- [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Parameter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/Parameter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/Parameter.cpp --- src/CMakeFiles/sbml.dir/sbml/Priority.cpp.o --- [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Priority.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/Priority.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/Priority.cpp --- src/CMakeFiles/sbml.dir/sbml/RateRule.cpp.o --- [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/RateRule.cpp.o --- src/CMakeFiles/sbml.dir/sbml/Reaction.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/RateRule.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/RateRule.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/RateRule.cpp --- src/CMakeFiles/sbml.dir/sbml/Reaction.cpp.o --- [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Reaction.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/Reaction.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/Reaction.cpp --- src/CMakeFiles/sbml.dir/sbml/Rule.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/SBMLConstructorException.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/Rule.cpp.o --- [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Rule.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/Rule.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/Rule.cpp --- src/CMakeFiles/sbml.dir/sbml/SBMLConstructorException.cpp.o --- [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLConstructorException.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLConstructorException.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBMLConstructorException.cpp --- src/CMakeFiles/sbml.dir/sbml/SBMLConvert.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/SBMLDocument.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/SBMLConvert.cpp.o --- [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLConvert.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLConvert.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBMLConvert.cpp --- src/CMakeFiles/sbml.dir/sbml/SBMLDocument.cpp.o --- [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLDocument.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLDocument.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBMLDocument.cpp --- src/CMakeFiles/sbml.dir/sbml/SBMLError.cpp.o --- [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLError.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLError.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBMLError.cpp --- src/CMakeFiles/sbml.dir/sbml/SBMLErrorLog.cpp.o --- [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLErrorLog.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLErrorLog.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBMLErrorLog.cpp --- src/CMakeFiles/sbml-static.dir/all --- --- src/CMakeFiles/sbml-static.dir/sbml/common/libsbml-version.cpp.o --- [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/common/libsbml-version.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/common/libsbml-version.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/common/libsbml-version.cpp --- src/CMakeFiles/sbml.dir/all --- --- src/CMakeFiles/sbml.dir/sbml/SBMLNamespaces.cpp.o --- [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLNamespaces.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLNamespaces.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBMLNamespaces.cpp --- src/CMakeFiles/sbml-static.dir/all --- --- src/CMakeFiles/sbml-static.dir/sbml/common/operationReturnValues.cpp.o --- [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/common/operationReturnValues.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/common/operationReturnValues.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/common/operationReturnValues.cpp --- src/CMakeFiles/sbml.dir/all --- --- src/CMakeFiles/sbml.dir/sbml/SBMLReader.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/SBMLTransforms.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/SBMLReader.cpp.o --- [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLReader.cpp.o --- src/CMakeFiles/sbml-static.dir/all --- --- src/CMakeFiles/sbml-static.dir/sbml/conversion/ConversionOption.cpp.o --- --- src/CMakeFiles/sbml.dir/all --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLReader.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBMLReader.cpp --- src/CMakeFiles/sbml-static.dir/all --- [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/ConversionOption.cpp.o --- src/CMakeFiles/sbml.dir/all --- --- src/CMakeFiles/sbml.dir/sbml/SBMLTransforms.cpp.o --- [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLTransforms.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLTransforms.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBMLTransforms.cpp --- src/CMakeFiles/sbml-static.dir/all --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/conversion/ConversionOption.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/ConversionOption.cpp --- src/CMakeFiles/sbml.dir/all --- --- src/CMakeFiles/sbml.dir/sbml/SBMLTypeCodes.cpp.o --- [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLTypeCodes.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLTypeCodes.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBMLTypeCodes.cpp --- src/CMakeFiles/sbml.dir/sbml/SBMLVisitor.cpp.o --- [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLVisitor.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLVisitor.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBMLVisitor.cpp --- src/CMakeFiles/sbml.dir/sbml/SBMLWriter.cpp.o --- [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLWriter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLWriter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBMLWriter.cpp --- src/CMakeFiles/sbml.dir/sbml/SBO.cpp.o --- [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBO.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBO.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBO.cpp --- src/CMakeFiles/sbml-static.dir/all --- --- src/CMakeFiles/sbml-static.dir/sbml/conversion/ConversionProperties.cpp.o --- [ 16%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/ConversionProperties.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/conversion/ConversionProperties.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/ConversionProperties.cpp --- src/CMakeFiles/sbml.dir/all --- --- src/CMakeFiles/sbml.dir/sbml/SBase.cpp.o --- [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBase.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBase.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBase.cpp --- src/CMakeFiles/sbml.dir/sbml/SimpleSpeciesReference.cpp.o --- [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SimpleSpeciesReference.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/SimpleSpeciesReference.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SimpleSpeciesReference.cpp --- src/CMakeFiles/sbml.dir/sbml/Species.cpp.o --- [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Species.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB 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-I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/SpeciesReference.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SpeciesReference.cpp --- src/CMakeFiles/sbml.dir/sbml/SpeciesType.cpp.o --- [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SpeciesType.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/SpeciesType.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SpeciesType.cpp --- src/CMakeFiles/sbml.dir/sbml/StoichiometryMath.cpp.o --- [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/StoichiometryMath.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/StoichiometryMath.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/StoichiometryMath.cpp --- src/CMakeFiles/sbml.dir/sbml/SyntaxChecker.cpp.o --- [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SyntaxChecker.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/SyntaxChecker.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SyntaxChecker.cpp --- src/CMakeFiles/sbml.dir/sbml/Trigger.cpp.o --- [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Trigger.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/Trigger.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/Trigger.cpp --- src/CMakeFiles/sbml-static.dir/all --- --- src/CMakeFiles/sbml-static.dir/sbml/conversion/RegisterConverters.cpp.o --- [ 18%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/RegisterConverters.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/conversion/RegisterConverters.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/RegisterConverters.cpp --- src/CMakeFiles/sbml.dir/all --- --- src/CMakeFiles/sbml.dir/sbml/Unit.cpp.o --- [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Unit.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/Unit.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/Unit.cpp --- src/CMakeFiles/sbml.dir/sbml/UnitDefinition.cpp.o --- [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/UnitDefinition.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/UnitDefinition.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/UnitDefinition.cpp --- src/CMakeFiles/sbml.dir/sbml/UnitKind.c.o --- --- src/CMakeFiles/sbml.dir/sbml/units/FormulaUnitsData.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/UnitKind.c.o --- [ 18%] Building C object src/CMakeFiles/sbml.dir/sbml/UnitKind.c.o cd /construction/biology/libsbml/.build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fPIC -o CMakeFiles/sbml.dir/sbml/UnitKind.c.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/UnitKind.c --- src/CMakeFiles/sbml.dir/sbml/units/UnitFormulaFormatter.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/units/UnitKindList.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/units/UnitFormulaFormatter.cpp.o --- [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/units/UnitFormulaFormatter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/units/UnitFormulaFormatter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/units/UnitFormulaFormatter.cpp --- src/CMakeFiles/sbml.dir/sbml/units/UnitKindList.cpp.o --- [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/units/UnitKindList.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX 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-I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/units/FormulaUnitsData.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/units/FormulaUnitsData.cpp --- src/CMakeFiles/sbml-static.dir/all --- --- src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverter.cpp.o --- [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/SBMLConverter.cpp --- src/CMakeFiles/sbml.dir/all --- --- src/CMakeFiles/sbml.dir/sbml/util/ElementFilter.cpp.o --- [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/ElementFilter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/ElementFilter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/util/ElementFilter.cpp --- src/CMakeFiles/sbml.dir/sbml/util/IdFilter.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/util/IdList.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/util/IdFilter.cpp.o --- [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/IdFilter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/IdFilter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/util/IdFilter.cpp --- src/CMakeFiles/sbml.dir/sbml/util/IdList.cpp.o --- [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/IdList.cpp.o --- src/CMakeFiles/sbml.dir/sbml/util/IdentifierTransformer.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/util/IdList.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/IdList.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/util/IdList.cpp --- src/CMakeFiles/sbml.dir/sbml/util/List.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/util/IdentifierTransformer.cpp.o --- [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/IdentifierTransformer.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/IdentifierTransformer.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/util/IdentifierTransformer.cpp --- src/CMakeFiles/sbml.dir/sbml/util/List.cpp.o --- [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/List.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/List.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/util/List.cpp --- src/CMakeFiles/sbml.dir/sbml/util/MetaIdFilter.cpp.o --- [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/MetaIdFilter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/MetaIdFilter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/util/MetaIdFilter.cpp --- src/CMakeFiles/sbml.dir/sbml/util/PrefixTransformer.cpp.o --- [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/PrefixTransformer.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/PrefixTransformer.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/util/PrefixTransformer.cpp --- src/CMakeFiles/sbml.dir/sbml/util/util.cpp.o --- [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/util.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/util.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/util/util.cpp --- src/CMakeFiles/sbml.dir/sbml/util/Stack.c.o --- [ 21%] Building C object src/CMakeFiles/sbml.dir/sbml/util/Stack.c.o cd /construction/biology/libsbml/.build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fPIC -o CMakeFiles/sbml.dir/sbml/util/Stack.c.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/util/Stack.c --- src/CMakeFiles/sbml.dir/sbml/util/StringBuffer.c.o --- --- src/CMakeFiles/sbml.dir/sbml/util/memory.c.o --- --- src/CMakeFiles/sbml.dir/sbml/util/StringBuffer.c.o --- [ 21%] Building C object src/CMakeFiles/sbml.dir/sbml/util/StringBuffer.c.o cd /construction/biology/libsbml/.build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fPIC -o CMakeFiles/sbml.dir/sbml/util/StringBuffer.c.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/util/StringBuffer.c --- src/CMakeFiles/sbml.dir/sbml/util/memory.c.o --- [ 22%] Building C object src/CMakeFiles/sbml.dir/sbml/util/memory.c.o cd /construction/biology/libsbml/.build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fPIC -o CMakeFiles/sbml.dir/sbml/util/memory.c.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/util/memory.c --- src/CMakeFiles/sbml.dir/sbml/validator/ConsistencyValidator.cpp.o --- [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/ConsistencyValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/ConsistencyValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/ConsistencyValidator.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o --- [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o --- src/CMakeFiles/sbml.dir/sbml/validator/InternalConsistencyValidator.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/IdentifierConsistencyValidator.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/InternalConsistencyValidator.cpp.o --- [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/InternalConsistencyValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/InternalConsistencyValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/InternalConsistencyValidator.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/L1CompatibilityValidator.cpp.o --- [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L1CompatibilityValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS 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-I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/L2v1CompatibilityValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/L2v1CompatibilityValidator.cpp --- src/CMakeFiles/sbml-static.dir/all --- --- src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverterRegistry.cpp.o --- [ 23%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverterRegistry.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB 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src/CMakeFiles/sbml.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/L2v2CompatibilityValidator.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o --- [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/L2v3CompatibilityValidator.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o --- [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/L2v4CompatibilityValidator.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o --- [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/L3v1CompatibilityValidator.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o --- [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/L3v2CompatibilityValidator.cpp --- src/CMakeFiles/sbml-static.dir/all --- --- src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o --- [ 24%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/SBMLFunctionDefinitionConverter.cpp --- src/CMakeFiles/sbml.dir/all --- --- src/CMakeFiles/sbml.dir/sbml/validator/MathMLConsistencyValidator.cpp.o --- [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/MathMLConsistencyValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/MathMLConsistencyValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/MathMLConsistencyValidator.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/ModelingPracticeValidator.cpp.o --- [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/ModelingPracticeValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/ModelingPracticeValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/ModelingPracticeValidator.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/OverdeterminedValidator.cpp.o --- [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/OverdeterminedValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/OverdeterminedValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/OverdeterminedValidator.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/SBMLExternalValidator.cpp.o --- [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/SBMLExternalValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/SBMLExternalValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/SBMLExternalValidator.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/SBMLInternalValidator.cpp.o --- [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/SBMLInternalValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/SBMLInternalValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/SBMLInternalValidator.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/SBMLValidator.cpp.o --- [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/SBMLValidator.cpp.o cd 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Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/SBOConsistencyValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/SBOConsistencyValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/SBOConsistencyValidator.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o --- [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/StrictUnitConsistencyValidator.cpp --- src/CMakeFiles/sbml-static.dir/all --- --- src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLIdConverter.cpp.o --- [ 26%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLIdConverter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLIdConverter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/SBMLIdConverter.cpp --- src/CMakeFiles/sbml.dir/all --- --- src/CMakeFiles/sbml.dir/sbml/validator/UnitConsistencyValidator.cpp.o --- [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/UnitConsistencyValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/UnitConsistencyValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/UnitConsistencyValidator.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/VConstraint.cpp.o --- [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/VConstraint.cpp.o cd 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/construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/ArgumentsUnitsCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/ArgumentsUnitsCheck.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/Validator.cpp.o --- [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/Validator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ 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src/CMakeFiles/sbml.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o --- [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/CiElementMathCheck.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/AssignmentRuleOrdering.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o --- [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/CiElementNot0DComp.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o --- [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/CompartmentOutsideCycles.cpp --- src/CMakeFiles/sbml-static.dir/all --- --- src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o --- [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/SBMLInferUnitsConverter.cpp --- src/CMakeFiles/sbml.dir/all --- --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o --- [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o --- [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/EqualityArgsMathCheck.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o --- [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/ExponentUnitsCheck.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o --- [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG 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CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionReferredToExists.cpp.o --- [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionReferredToExists.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionReferredToExists.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/FunctionReferredToExists.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/IdBase.cpp.o --- [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/IdBase.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/IdBase.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/IdBase.cpp --- src/CMakeFiles/sbml-static.dir/all --- --- src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o --- [ 30%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/SBMLInitialAssignmentConverter.cpp --- src/CMakeFiles/sbml.dir/all --- --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o --- [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing 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CMakeFiles/sbml.dir/sbml/validator/constraints/LambdaMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/LambdaMathCheck.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterMathCheck.cpp.o --- [ 32%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/LocalParameterMathCheck.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o --- [ 32%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/MathMLBase.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o --- [ 32%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/LogicalArgsMathCheck.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/MathMLBase.cpp.o --- [ 32%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/MathMLBase.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/MathMLBase.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/MathMLBase.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o --- [ 32%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/ModelUnitsDangling.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o --- [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/NumberArgsMathCheck.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o --- [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/NumericArgsMathCheck.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o --- [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/NumericReturnMathCheck.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o --- [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/OverDeterminedCheck.cpp --- src/CMakeFiles/sbml-static.dir/all --- --- src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o --- [ 33%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/SBMLLevel1Version1Converter.cpp --- src/CMakeFiles/sbml.dir/all --- --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o --- [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/PieceBooleanMathCheck.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o --- [ 34%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/PiecewiseValueMathCheck.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o --- [ 34%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/PowerUnitsCheck.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o --- [ 34%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o --- [ 34%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o --- [ 35%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCycles.cpp.o --- [ 35%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCycles.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCycles.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/RateOfCycles.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o --- [ 35%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/ReportEmptyListOf.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o --- [ 35%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/SpeciesReactionOrRule.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o --- [ 35%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX 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src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o --- [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/UniqueIdsInModel.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueMetaId.cpp.o --- [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueMetaId.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueMetaId.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/UniqueMetaId.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp.o --- [ 37%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o --- [ 37%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o --- [ 37%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp.o --- [ 37%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp.o --- [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o --- [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/UniqueVarsInRules.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/UnitsBase.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/UnitsBase.cpp.o --- [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UnitsBase.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UnitsBase.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/UnitsBase.cpp --- src/CMakeFiles/sbml.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o --- [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/ValidCnUnitsValue.cpp --- src/CMakeFiles/sbml.dir/sbml/math/ASTBase.cpp.o --- [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTBase.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG 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-o CMakeFiles/sbml.dir/sbml/math/ASTBinaryFunctionNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTBinaryFunctionNode.cpp --- src/CMakeFiles/sbml.dir/sbml/math/ASTCSymbol.cpp.o --- [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCSymbol.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCSymbol.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTCSymbol.cpp --- src/CMakeFiles/sbml.dir/sbml/math/ASTCSymbolAvogadroNode.cpp.o --- [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCSymbolAvogadroNode.cpp.o --- src/CMakeFiles/sbml.dir/sbml/math/ASTCSymbolDelayNode.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/math/ASTCSymbolAvogadroNode.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCSymbolAvogadroNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTCSymbolAvogadroNode.cpp --- src/CMakeFiles/sbml.dir/sbml/math/ASTCSymbolDelayNode.cpp.o --- [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCSymbolDelayNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCSymbolDelayNode.cpp.o -c 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/construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/SBMLLocalParameterConverter.cpp --- src/CMakeFiles/sbml.dir/all --- --- src/CMakeFiles/sbml.dir/sbml/math/ASTCSymbolRateOfNode.cpp.o --- [ 40%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCSymbolRateOfNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCSymbolRateOfNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTCSymbolRateOfNode.cpp --- src/CMakeFiles/sbml.dir/sbml/math/ASTCSymbolTimeNode.cpp.o --- [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCSymbolTimeNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCSymbolTimeNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTCSymbolTimeNode.cpp --- src/CMakeFiles/sbml.dir/sbml/math/ASTCiFunctionNode.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/math/ASTCiNumberNode.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/math/ASTCiFunctionNode.cpp.o --- [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCiFunctionNode.cpp.o --- src/CMakeFiles/sbml.dir/sbml/math/ASTCiNumberNode.cpp.o --- [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCiNumberNode.cpp.o --- src/CMakeFiles/sbml.dir/sbml/math/ASTCiFunctionNode.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG 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/construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTCiNumberNode.cpp --- src/CMakeFiles/sbml.dir/sbml/math/ASTCnBase.cpp.o --- [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCnBase.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCnBase.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTCnBase.cpp --- src/CMakeFiles/sbml.dir/sbml/math/ASTCnExponentialNode.cpp.o --- [ 42%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCnExponentialNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCnExponentialNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTCnExponentialNode.cpp --- src/CMakeFiles/sbml.dir/sbml/math/ASTCnIntegerNode.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/math/ASTCnRationalNode.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/math/ASTCnIntegerNode.cpp.o --- [ 42%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCnIntegerNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCnIntegerNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTCnIntegerNode.cpp --- src/CMakeFiles/sbml.dir/sbml/math/ASTCnRealNode.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/math/ASTCnRationalNode.cpp.o --- [ 42%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCnRationalNode.cpp.o --- src/CMakeFiles/sbml.dir/sbml/math/ASTConstantNumberNode.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/math/ASTCnRationalNode.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCnRationalNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTCnRationalNode.cpp --- src/CMakeFiles/sbml.dir/sbml/math/ASTCnRealNode.cpp.o --- [ 42%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCnRealNode.cpp.o --- src/CMakeFiles/sbml.dir/sbml/math/ASTConstantNumberNode.cpp.o --- [ 42%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTConstantNumberNode.cpp.o --- src/CMakeFiles/sbml.dir/sbml/math/ASTCnRealNode.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG 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/construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTConstantNumberNode.cpp --- src/CMakeFiles/sbml.dir/sbml/math/ASTFunction.cpp.o --- [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTFunction.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTFunction.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTFunction.cpp --- src/CMakeFiles/sbml.dir/sbml/math/ASTFunctionBase.cpp.o --- [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTFunctionBase.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTFunctionBase.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTFunctionBase.cpp --- src/CMakeFiles/sbml.dir/sbml/math/ASTLambdaFunctionNode.cpp.o --- [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTLambdaFunctionNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTLambdaFunctionNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTLambdaFunctionNode.cpp --- src/CMakeFiles/sbml-static.dir/all --- --- src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRateOfConverter.cpp.o --- [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRateOfConverter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRateOfConverter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/SBMLRateOfConverter.cpp --- src/CMakeFiles/sbml.dir/all --- --- src/CMakeFiles/sbml.dir/sbml/math/ASTNaryFunctionNode.cpp.o --- [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTNaryFunctionNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTNaryFunctionNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTNaryFunctionNode.cpp --- src/CMakeFiles/sbml.dir/sbml/math/ASTNode.cpp.o --- [ 44%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTNode.cpp --- src/CMakeFiles/sbml.dir/sbml/math/ASTNumber.cpp.o --- [ 44%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTNumber.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTNumber.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTNumber.cpp --- src/CMakeFiles/sbml.dir/sbml/math/ASTPiecewiseFunctionNode.cpp.o --- [ 44%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTPiecewiseFunctionNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTPiecewiseFunctionNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTPiecewiseFunctionNode.cpp --- src/CMakeFiles/sbml.dir/sbml/math/ASTQualifierNode.cpp.o --- [ 44%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTQualifierNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTQualifierNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTQualifierNode.cpp --- src/CMakeFiles/sbml.dir/sbml/math/ASTSemanticsNode.cpp.o --- [ 44%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTSemanticsNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTSemanticsNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTSemanticsNode.cpp --- src/CMakeFiles/sbml.dir/sbml/math/ASTTypes.cpp.o --- [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTTypes.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTTypes.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTTypes.cpp --- src/CMakeFiles/sbml.dir/sbml/math/ASTUnaryFunctionNode.cpp.o --- [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTUnaryFunctionNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTUnaryFunctionNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTUnaryFunctionNode.cpp --- src/CMakeFiles/sbml.dir/sbml/math/L3Parser.cpp.o --- [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/L3Parser.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/L3Parser.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/L3Parser.cpp --- src/CMakeFiles/sbml.dir/sbml/math/L3ParserSettings.cpp.o --- [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/L3ParserSettings.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/L3ParserSettings.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/L3ParserSettings.cpp --- src/CMakeFiles/sbml.dir/sbml/math/MathML.cpp.o --- [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/MathML.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/MathML.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/MathML.cpp --- src/CMakeFiles/sbml.dir/sbml/math/FormulaFormatter.c.o --- [ 46%] Building C object src/CMakeFiles/sbml.dir/sbml/math/FormulaFormatter.c.o cd /construction/biology/libsbml/.build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fPIC -o CMakeFiles/sbml.dir/sbml/math/FormulaFormatter.c.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/FormulaFormatter.c --- src/CMakeFiles/sbml.dir/sbml/math/FormulaParser.c.o --- [ 46%] Building C object src/CMakeFiles/sbml.dir/sbml/math/FormulaParser.c.o cd /construction/biology/libsbml/.build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fPIC -o CMakeFiles/sbml.dir/sbml/math/FormulaParser.c.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/FormulaParser.c --- src/CMakeFiles/sbml.dir/sbml/math/FormulaTokenizer.c.o --- --- src/CMakeFiles/sbml.dir/sbml/math/L3FormulaFormatter.c.o --- --- src/CMakeFiles/sbml.dir/sbml/math/FormulaTokenizer.c.o --- [ 46%] Building C object src/CMakeFiles/sbml.dir/sbml/math/FormulaTokenizer.c.o cd /construction/biology/libsbml/.build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fPIC -o CMakeFiles/sbml.dir/sbml/math/FormulaTokenizer.c.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/FormulaTokenizer.c --- src/CMakeFiles/sbml.dir/sbml/math/L3FormulaFormatter.c.o --- [ 46%] Building C object src/CMakeFiles/sbml.dir/sbml/math/L3FormulaFormatter.c.o cd /construction/biology/libsbml/.build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fPIC -o CMakeFiles/sbml.dir/sbml/math/L3FormulaFormatter.c.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/L3FormulaFormatter.c --- src/CMakeFiles/sbml-static.dir/all --- --- src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLReactionConverter.cpp.o --- [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLReactionConverter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLReactionConverter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/SBMLReactionConverter.cpp --- src/CMakeFiles/sbml.dir/all --- --- src/CMakeFiles/sbml.dir/sbml/compress/CompressCommon.cpp.o --- [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/CompressCommon.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/compress/CompressCommon.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/compress/CompressCommon.cpp --- src/CMakeFiles/sbml.dir/sbml/compress/InputDecompressor.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/compress/OutputCompressor.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/compress/InputDecompressor.cpp.o --- [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/InputDecompressor.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/compress/InputDecompressor.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/compress/InputDecompressor.cpp --- src/CMakeFiles/sbml.dir/sbml/compress/OutputCompressor.cpp.o --- [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/OutputCompressor.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/compress/OutputCompressor.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/compress/OutputCompressor.cpp --- src/CMakeFiles/sbml.dir/sbml/compress/bzfstream.cpp.o --- [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/bzfstream.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/compress/bzfstream.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/compress/bzfstream.cpp --- src/CMakeFiles/sbml.dir/sbml/compress/zip.c.o --- --- src/CMakeFiles/sbml.dir/sbml/compress/unzip.c.o --- --- src/CMakeFiles/sbml.dir/sbml/compress/zip.c.o --- [ 47%] Building C object src/CMakeFiles/sbml.dir/sbml/compress/zip.c.o cd /construction/biology/libsbml/.build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fPIC -o CMakeFiles/sbml.dir/sbml/compress/zip.c.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/compress/zip.c --- src/CMakeFiles/sbml.dir/sbml/compress/unzip.c.o --- [ 48%] Building C object src/CMakeFiles/sbml.dir/sbml/compress/unzip.c.o cd /construction/biology/libsbml/.build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fPIC -o CMakeFiles/sbml.dir/sbml/compress/unzip.c.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/compress/unzip.c --- src/CMakeFiles/sbml.dir/sbml/compress/ioapi.c.o --- [ 48%] Building C object src/CMakeFiles/sbml.dir/sbml/compress/ioapi.c.o cd /construction/biology/libsbml/.build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fPIC -o CMakeFiles/sbml.dir/sbml/compress/ioapi.c.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/compress/ioapi.c --- src/CMakeFiles/sbml.dir/sbml/compress/ioapi_mem.c.o --- [ 48%] Building C object src/CMakeFiles/sbml.dir/sbml/compress/ioapi_mem.c.o cd /construction/biology/libsbml/.build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fPIC -o CMakeFiles/sbml.dir/sbml/compress/ioapi_mem.c.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/compress/ioapi_mem.c --- src/CMakeFiles/sbml.dir/sbml/compress/zfstream.cpp.o --- [ 48%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/zfstream.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/compress/zfstream.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/compress/zfstream.cpp --- src/CMakeFiles/sbml.dir/sbml/compress/zipfstream.cpp.o --- [ 48%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/zipfstream.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/compress/zipfstream.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/compress/zipfstream.cpp --- src/CMakeFiles/sbml.dir/sbml/xml/XMLAttributes.cpp.o --- [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLAttributes.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLAttributes.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLAttributes.cpp --- src/CMakeFiles/sbml.dir/sbml/xml/XMLBuffer.cpp.o --- [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLBuffer.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLBuffer.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLBuffer.cpp --- src/CMakeFiles/sbml.dir/sbml/xml/XMLConstructorException.cpp.o --- [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLConstructorException.cpp.o --- src/CMakeFiles/sbml-static.dir/all --- --- src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRuleConverter.cpp.o --- --- src/CMakeFiles/sbml.dir/all --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLConstructorException.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLConstructorException.cpp --- src/CMakeFiles/sbml-static.dir/all --- [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRuleConverter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRuleConverter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/SBMLRuleConverter.cpp --- src/CMakeFiles/sbml.dir/all --- --- src/CMakeFiles/sbml.dir/sbml/xml/XMLError.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/xml/XMLErrorLog.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/xml/XMLError.cpp.o --- [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLError.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLError.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLError.cpp --- src/CMakeFiles/sbml.dir/sbml/xml/XMLErrorLog.cpp.o --- [ 50%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLErrorLog.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLErrorLog.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLErrorLog.cpp --- src/CMakeFiles/sbml.dir/sbml/xml/XMLLogOverride.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/xml/XMLFileBuffer.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/xml/XMLLogOverride.cpp.o --- [ 50%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLLogOverride.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLLogOverride.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLLogOverride.cpp --- src/CMakeFiles/sbml.dir/sbml/xml/XMLHandler.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/xml/XMLFileBuffer.cpp.o --- [ 50%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLFileBuffer.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLFileBuffer.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLFileBuffer.cpp --- src/CMakeFiles/sbml.dir/sbml/xml/XMLHandler.cpp.o --- [ 50%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLHandler.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLHandler.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLHandler.cpp --- src/CMakeFiles/sbml.dir/sbml/xml/XMLInputStream.cpp.o --- [ 50%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLInputStream.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLInputStream.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLInputStream.cpp --- src/CMakeFiles/sbml-static.dir/all --- --- src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o --- [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/SBMLStripPackageConverter.cpp --- src/CMakeFiles/sbml.dir/all --- --- src/CMakeFiles/sbml.dir/sbml/xml/XMLMemoryBuffer.cpp.o --- [ 52%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLMemoryBuffer.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLMemoryBuffer.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLMemoryBuffer.cpp --- src/CMakeFiles/sbml.dir/sbml/xml/XMLNamespaces.cpp.o --- [ 52%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLNamespaces.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLNamespaces.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLNamespaces.cpp --- src/CMakeFiles/sbml.dir/sbml/xml/XMLNode.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/xml/XMLOutputStream.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/xml/XMLParser.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/xml/XMLNode.cpp.o --- [ 52%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLNode.cpp --- src/CMakeFiles/sbml.dir/sbml/xml/XMLOutputStream.cpp.o --- [ 52%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLOutputStream.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLOutputStream.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLOutputStream.cpp --- src/CMakeFiles/sbml.dir/sbml/xml/XMLParser.cpp.o --- [ 52%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLParser.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLParser.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLParser.cpp --- src/CMakeFiles/sbml.dir/sbml/xml/XMLToken.cpp.o --- [ 53%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLToken.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLToken.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLToken.cpp --- src/CMakeFiles/sbml.dir/sbml/xml/XMLTokenizer.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/xml/XMLTriple.cpp.o --- --- src/CMakeFiles/sbml.dir/sbml/xml/XMLTokenizer.cpp.o --- [ 53%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLTokenizer.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLTokenizer.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLTokenizer.cpp --- src/CMakeFiles/sbml.dir/sbml/xml/XMLTriple.cpp.o --- [ 53%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLTriple.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLTriple.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLTriple.cpp --- src/CMakeFiles/sbml.dir/sbml/xml/LibXMLAttributes.cpp.o --- [ 53%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/LibXMLAttributes.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/LibXMLAttributes.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/LibXMLAttributes.cpp --- src/CMakeFiles/sbml.dir/sbml/xml/LibXMLHandler.cpp.o --- [ 54%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/LibXMLHandler.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/LibXMLHandler.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/LibXMLHandler.cpp --- src/CMakeFiles/sbml.dir/sbml/xml/LibXMLNamespaces.cpp.o --- [ 54%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/LibXMLNamespaces.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/LibXMLNamespaces.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/LibXMLNamespaces.cpp --- src/CMakeFiles/sbml.dir/sbml/xml/LibXMLParser.cpp.o --- [ 54%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/LibXMLParser.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/LibXMLParser.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/LibXMLParser.cpp --- src/CMakeFiles/sbml.dir/sbml/xml/LibXMLTranscode.cpp.o --- [ 54%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/LibXMLTranscode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -Dsbml_EXPORTS -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/LibXMLTranscode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/LibXMLTranscode.cpp --- src/CMakeFiles/sbml-static.dir/all --- --- src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLUnitsConverter.cpp.o --- [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLUnitsConverter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLUnitsConverter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/conversion/SBMLUnitsConverter.cpp --- src/CMakeFiles/sbml-static.dir/sbml/extension/ASTBasePlugin.cpp.o --- [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/ASTBasePlugin.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/extension/ASTBasePlugin.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/extension/ASTBasePlugin.cpp --- src/CMakeFiles/sbml-static.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o --- [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/extension/ISBMLExtensionNamespaces.cpp --- src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPlugin.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPlugin.cpp.o --- [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPlugin.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPlugin.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/extension/SBMLDocumentPlugin.cpp --- src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o --- [ 55%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o -c 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-I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBasePluginCreatorBase.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/extension/SBasePluginCreatorBase.cpp --- src/CMakeFiles/sbml-static.dir/sbml/AlgebraicRule.cpp.o --- [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/AlgebraicRule.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/AlgebraicRule.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/AlgebraicRule.cpp --- src/CMakeFiles/sbml-static.dir/sbml/AssignmentRule.cpp.o --- [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/AssignmentRule.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/AssignmentRule.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/AssignmentRule.cpp --- src/CMakeFiles/sbml-static.dir/sbml/Compartment.cpp.o --- [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Compartment.cpp.o --- src/CMakeFiles/sbml-static.dir/sbml/CompartmentType.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/Compartment.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/Compartment.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/Compartment.cpp --- src/CMakeFiles/sbml-static.dir/sbml/CompartmentType.cpp.o --- [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/CompartmentType.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/CompartmentType.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/CompartmentType.cpp --- src/CMakeFiles/sbml.dir/all --- cd /construction/biology/libsbml/.build/src && /usr/local/bin/cmake -E cmake_symlink_library libsbml.so.5.17.0 libsbml.so.5 libsbml.so [ 58%] Built target sbml --- src/CMakeFiles/sbml-static.dir/all --- --- src/CMakeFiles/sbml-static.dir/sbml/Constraint.cpp.o --- [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Constraint.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/Constraint.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/Constraint.cpp --- src/CMakeFiles/sbml-static.dir/sbml/Delay.cpp.o --- [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Delay.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/Delay.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/Delay.cpp --- src/CMakeFiles/sbml-static.dir/sbml/Event.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/EventAssignment.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/Event.cpp.o --- [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Event.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/Event.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/Event.cpp --- src/CMakeFiles/sbml-static.dir/sbml/EventAssignment.cpp.o --- [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/EventAssignment.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/EventAssignment.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/EventAssignment.cpp --- src/CMakeFiles/sbml-static.dir/sbml/ExpectedAttributes.cpp.o --- [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/ExpectedAttributes.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/ExpectedAttributes.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/ExpectedAttributes.cpp --- src/CMakeFiles/sbml-static.dir/sbml/FunctionDefinition.cpp.o --- [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/FunctionDefinition.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/FunctionDefinition.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/FunctionDefinition.cpp --- src/CMakeFiles/sbml-static.dir/sbml/InitialAssignment.cpp.o --- [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/InitialAssignment.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/InitialAssignment.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/InitialAssignment.cpp --- src/CMakeFiles/sbml-static.dir/sbml/KineticLaw.cpp.o --- [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/KineticLaw.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/KineticLaw.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/KineticLaw.cpp --- src/CMakeFiles/sbml-static.dir/sbml/ListOf.cpp.o --- [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/ListOf.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/ListOf.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/ListOf.cpp --- src/CMakeFiles/sbml-static.dir/sbml/LocalParameter.cpp.o --- [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/LocalParameter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/LocalParameter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/LocalParameter.cpp --- src/CMakeFiles/sbml-static.dir/sbml/Model.cpp.o --- [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Model.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/Model.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/Model.cpp --- src/CMakeFiles/sbml-static.dir/sbml/ModifierSpeciesReference.cpp.o --- [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/ModifierSpeciesReference.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/ModifierSpeciesReference.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/ModifierSpeciesReference.cpp --- src/CMakeFiles/sbml-static.dir/sbml/Parameter.cpp.o --- [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Parameter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/Parameter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/Parameter.cpp --- src/CMakeFiles/sbml-static.dir/sbml/Priority.cpp.o --- [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Priority.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/Priority.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/Priority.cpp --- src/CMakeFiles/sbml-static.dir/sbml/RateRule.cpp.o --- [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/RateRule.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/RateRule.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/RateRule.cpp --- src/CMakeFiles/sbml-static.dir/sbml/Reaction.cpp.o --- [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Reaction.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/Reaction.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/Reaction.cpp --- src/CMakeFiles/sbml-static.dir/sbml/Rule.cpp.o --- [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Rule.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/Rule.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/Rule.cpp --- src/CMakeFiles/sbml-static.dir/sbml/SBMLConstructorException.cpp.o --- [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLConstructorException.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/SBMLConstructorException.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBMLConstructorException.cpp --- src/CMakeFiles/sbml-static.dir/sbml/SBMLConvert.cpp.o --- [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLConvert.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/SBMLConvert.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBMLConvert.cpp --- src/CMakeFiles/sbml-static.dir/sbml/SBMLDocument.cpp.o --- [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLDocument.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/SBMLDocument.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBMLDocument.cpp --- src/CMakeFiles/sbml-static.dir/sbml/SBMLError.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/SBMLErrorLog.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/SBMLError.cpp.o --- [ 63%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLError.cpp.o --- src/CMakeFiles/sbml-static.dir/sbml/SBMLNamespaces.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/SBMLError.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/SBMLError.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBMLError.cpp --- src/CMakeFiles/sbml-static.dir/sbml/SBMLErrorLog.cpp.o --- [ 63%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLErrorLog.cpp.o --- src/CMakeFiles/sbml-static.dir/sbml/SBMLNamespaces.cpp.o --- [ 63%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLNamespaces.cpp.o --- src/CMakeFiles/sbml-static.dir/sbml/SBMLErrorLog.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/SBMLErrorLog.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBMLErrorLog.cpp --- src/CMakeFiles/sbml-static.dir/sbml/SBMLNamespaces.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/SBMLNamespaces.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBMLNamespaces.cpp --- src/CMakeFiles/sbml-static.dir/sbml/SBMLReader.cpp.o --- [ 63%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLReader.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/SBMLReader.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBMLReader.cpp --- src/CMakeFiles/sbml-static.dir/sbml/SBMLTransforms.cpp.o --- [ 63%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLTransforms.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/SBMLTransforms.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBMLTransforms.cpp --- src/CMakeFiles/sbml-static.dir/sbml/SBMLTypeCodes.cpp.o --- [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLTypeCodes.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/SBMLTypeCodes.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBMLTypeCodes.cpp --- src/CMakeFiles/sbml-static.dir/sbml/SBMLVisitor.cpp.o --- [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLVisitor.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/SBMLVisitor.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBMLVisitor.cpp --- src/CMakeFiles/sbml-static.dir/sbml/SBMLWriter.cpp.o --- [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLWriter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/SBMLWriter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBMLWriter.cpp --- src/CMakeFiles/sbml-static.dir/sbml/SBO.cpp.o --- [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBO.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/SBO.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBO.cpp --- src/CMakeFiles/sbml-static.dir/sbml/SBase.cpp.o --- [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBase.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/SBase.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SBase.cpp --- src/CMakeFiles/sbml-static.dir/sbml/SimpleSpeciesReference.cpp.o --- [ 65%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SimpleSpeciesReference.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/SimpleSpeciesReference.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SimpleSpeciesReference.cpp --- src/CMakeFiles/sbml-static.dir/sbml/Species.cpp.o --- [ 65%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Species.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/Species.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/Species.cpp --- src/CMakeFiles/sbml-static.dir/sbml/SpeciesReference.cpp.o --- [ 65%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SpeciesReference.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/SpeciesReference.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SpeciesReference.cpp --- src/CMakeFiles/sbml-static.dir/sbml/SpeciesType.cpp.o --- [ 65%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SpeciesType.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/SpeciesType.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SpeciesType.cpp --- src/CMakeFiles/sbml-static.dir/sbml/StoichiometryMath.cpp.o --- [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/StoichiometryMath.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/StoichiometryMath.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/StoichiometryMath.cpp --- src/CMakeFiles/sbml-static.dir/sbml/SyntaxChecker.cpp.o --- [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SyntaxChecker.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/SyntaxChecker.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/SyntaxChecker.cpp --- src/CMakeFiles/sbml-static.dir/sbml/Trigger.cpp.o --- [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Trigger.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/Trigger.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/Trigger.cpp --- src/CMakeFiles/sbml-static.dir/sbml/Unit.cpp.o --- [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Unit.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/Unit.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/Unit.cpp --- src/CMakeFiles/sbml-static.dir/sbml/UnitDefinition.cpp.o --- [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/UnitDefinition.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/UnitDefinition.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/UnitDefinition.cpp --- src/CMakeFiles/sbml-static.dir/sbml/UnitKind.c.o --- [ 67%] Building C object src/CMakeFiles/sbml-static.dir/sbml/UnitKind.c.o cd /construction/biology/libsbml/.build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -o CMakeFiles/sbml-static.dir/sbml/UnitKind.c.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/UnitKind.c --- src/CMakeFiles/sbml-static.dir/sbml/units/FormulaUnitsData.cpp.o --- [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/units/FormulaUnitsData.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/units/FormulaUnitsData.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/units/FormulaUnitsData.cpp --- src/CMakeFiles/sbml-static.dir/sbml/units/UnitFormulaFormatter.cpp.o --- [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/units/UnitFormulaFormatter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/units/UnitFormulaFormatter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/units/UnitFormulaFormatter.cpp --- src/CMakeFiles/sbml-static.dir/sbml/units/UnitKindList.cpp.o --- [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/units/UnitKindList.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/units/UnitKindList.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/units/UnitKindList.cpp --- src/CMakeFiles/sbml-static.dir/sbml/util/ElementFilter.cpp.o --- [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/ElementFilter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/util/ElementFilter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/util/ElementFilter.cpp --- src/CMakeFiles/sbml-static.dir/sbml/util/IdFilter.cpp.o --- [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/IdFilter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/util/IdFilter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/util/IdFilter.cpp --- src/CMakeFiles/sbml-static.dir/sbml/util/IdList.cpp.o --- [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/IdList.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/util/IdList.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/util/IdList.cpp --- src/CMakeFiles/sbml-static.dir/sbml/util/IdentifierTransformer.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/util/List.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/util/IdentifierTransformer.cpp.o --- [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/IdentifierTransformer.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/util/IdentifierTransformer.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/util/IdentifierTransformer.cpp --- src/CMakeFiles/sbml-static.dir/sbml/util/List.cpp.o --- [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/List.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/util/List.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/util/List.cpp --- src/CMakeFiles/sbml-static.dir/sbml/util/MetaIdFilter.cpp.o --- [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/MetaIdFilter.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/util/MetaIdFilter.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/util/MetaIdFilter.cpp --- src/CMakeFiles/sbml-static.dir/sbml/util/PrefixTransformer.cpp.o --- [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/PrefixTransformer.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/util/PrefixTransformer.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/util/PrefixTransformer.cpp --- src/CMakeFiles/sbml-static.dir/sbml/util/util.cpp.o --- [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/util.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/util/util.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/util/util.cpp --- src/CMakeFiles/sbml-static.dir/sbml/util/Stack.c.o --- [ 69%] Building C object src/CMakeFiles/sbml-static.dir/sbml/util/Stack.c.o cd /construction/biology/libsbml/.build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -o CMakeFiles/sbml-static.dir/sbml/util/Stack.c.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/util/Stack.c --- src/CMakeFiles/sbml-static.dir/sbml/util/StringBuffer.c.o --- --- src/CMakeFiles/sbml-static.dir/sbml/util/memory.c.o --- --- src/CMakeFiles/sbml-static.dir/sbml/validator/ConsistencyValidator.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/util/StringBuffer.c.o --- [ 69%] Building C object src/CMakeFiles/sbml-static.dir/sbml/util/StringBuffer.c.o cd /construction/biology/libsbml/.build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -o CMakeFiles/sbml-static.dir/sbml/util/StringBuffer.c.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/util/StringBuffer.c --- src/CMakeFiles/sbml-static.dir/sbml/util/memory.c.o --- [ 70%] Building C object src/CMakeFiles/sbml-static.dir/sbml/util/memory.c.o cd /construction/biology/libsbml/.build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -o CMakeFiles/sbml-static.dir/sbml/util/memory.c.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/util/memory.c --- src/CMakeFiles/sbml-static.dir/sbml/validator/ConsistencyValidator.cpp.o --- [ 70%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/ConsistencyValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/ConsistencyValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/ConsistencyValidator.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o --- [ 70%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/IdentifierConsistencyValidator.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/InternalConsistencyValidator.cpp.o --- [ 70%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/InternalConsistencyValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/InternalConsistencyValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/InternalConsistencyValidator.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/L1CompatibilityValidator.cpp.o --- [ 70%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L1CompatibilityValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/L1CompatibilityValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/L1CompatibilityValidator.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/L2v1CompatibilityValidator.cpp.o --- [ 71%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L2v1CompatibilityValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/L2v1CompatibilityValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/L2v1CompatibilityValidator.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o --- [ 71%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/L2v2CompatibilityValidator.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o --- [ 71%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/L2v3CompatibilityValidator.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o --- [ 71%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/L2v4CompatibilityValidator.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o --- [ 72%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/L3v1CompatibilityValidator.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o --- [ 72%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/L3v2CompatibilityValidator.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/MathMLConsistencyValidator.cpp.o --- [ 72%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/MathMLConsistencyValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/MathMLConsistencyValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/MathMLConsistencyValidator.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/ModelingPracticeValidator.cpp.o --- [ 72%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/ModelingPracticeValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/ModelingPracticeValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/ModelingPracticeValidator.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/OverdeterminedValidator.cpp.o --- [ 72%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/OverdeterminedValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/OverdeterminedValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/OverdeterminedValidator.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/SBMLExternalValidator.cpp.o --- [ 73%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/SBMLExternalValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/SBMLExternalValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/SBMLExternalValidator.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/SBMLInternalValidator.cpp.o --- [ 73%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/SBMLInternalValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/SBMLInternalValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/SBMLInternalValidator.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/SBMLValidator.cpp.o --- [ 73%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/SBMLValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/SBMLValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/SBMLValidator.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/SBOConsistencyValidator.cpp.o --- [ 73%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/SBOConsistencyValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/SBOConsistencyValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/SBOConsistencyValidator.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/validator/UnitConsistencyValidator.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o --- [ 73%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/StrictUnitConsistencyValidator.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/UnitConsistencyValidator.cpp.o --- [ 74%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/UnitConsistencyValidator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/UnitConsistencyValidator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/UnitConsistencyValidator.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/VConstraint.cpp.o --- [ 74%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/VConstraint.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/VConstraint.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/VConstraint.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/Validator.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheck.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/validator/Validator.cpp.o --- [ 74%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/Validator.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/Validator.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/Validator.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheck.cpp.o --- [ 74%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/ArgumentsUnitsCheck.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp.o --- [ 75%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentCycles.cpp.o --- [ 75%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentCycles.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentCycles.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/AssignmentCycles.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o --- [ 75%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/AssignmentRuleOrdering.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o --- [ 75%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/CiElementMathCheck.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o --- [ 75%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/CiElementNot0DComp.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o --- [ 76%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/CompartmentOutsideCycles.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o --- [ 76%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o --- [ 76%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/EqualityArgsMathCheck.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o --- [ 76%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/ExponentUnitsCheck.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o --- [ 76%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/FunctionApplyMathCheck.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionRecursion.cpp.o --- [ 77%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionRecursion.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionRecursion.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/FunctionDefinitionRecursion.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionVars.cpp.o --- [ 77%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionVars.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionVars.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/FunctionDefinitionVars.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionReferredToExists.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp.o --- [ 77%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC 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/construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionReferredToExists.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/FunctionReferredToExists.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdBase.cpp.o --- [ 78%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdBase.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdBase.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/IdBase.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o --- [ 78%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/IdNameNewOnSBase.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o --- [ 78%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ 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src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/LocalParameterMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/LocalParameterMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/LocalParameterMathCheck.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o --- [ 79%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o --- [ 79%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/LogicalArgsMathCheck.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/MathMLBase.cpp.o --- [ 79%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/MathMLBase.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/MathMLBase.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/MathMLBase.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o --- [ 80%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/ModelUnitsDangling.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o --- [ 80%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/NumberArgsMathCheck.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o --- [ 80%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/NumericArgsMathCheck.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o --- [ 80%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/NumericReturnMathCheck.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o --- [ 80%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/OverDeterminedCheck.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o --- [ 81%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/PieceBooleanMathCheck.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o --- [ 81%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/PiecewiseValueMathCheck.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o --- [ 81%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/PowerUnitsCheck.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o --- [ 81%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o --- [ 81%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o --- [ 82%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCycles.cpp.o --- [ 82%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCycles.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCycles.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/RateOfCycles.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o --- [ 82%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/ReportEmptyListOf.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o --- [ 82%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/SpeciesReactionOrRule.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o --- [ 83%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/StoichiometryMathVars.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdBase.cpp.o --- [ 83%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdBase.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdBase.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/UniqueIdBase.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp.o --- [ 83%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp.o --- [ 83%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o 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-O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/UniqueIdsInModel.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueMetaId.cpp.o --- [ 84%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueMetaId.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG 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-I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o --- [ 84%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml 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object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/UniqueVarsInRules.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UnitsBase.cpp.o --- [ 85%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UnitsBase.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UnitsBase.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/UnitsBase.cpp --- src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o --- [ 85%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/validator/constraints/ValidCnUnitsValue.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTBase.cpp.o --- [ 86%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTBase.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTBase.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTBase.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTBinaryFunctionNode.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbol.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTBinaryFunctionNode.cpp.o --- [ 86%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTBinaryFunctionNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTBinaryFunctionNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTBinaryFunctionNode.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbol.cpp.o --- [ 86%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbol.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbol.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTCSymbol.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolAvogadroNode.cpp.o --- [ 86%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolAvogadroNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 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-I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolDelayNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTCSymbolDelayNode.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolRateOfNode.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolTimeNode.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolRateOfNode.cpp.o --- [ 87%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolRateOfNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML 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-I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolTimeNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTCSymbolTimeNode.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTCiFunctionNode.cpp.o --- [ 87%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCiFunctionNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCiFunctionNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTCiFunctionNode.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTCiNumberNode.cpp.o --- [ 87%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCiNumberNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCiNumberNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTCiNumberNode.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTCnBase.cpp.o --- [ 87%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCnBase.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCnBase.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTCnBase.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTCnExponentialNode.cpp.o --- [ 88%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCnExponentialNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCnExponentialNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTCnExponentialNode.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTCnIntegerNode.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTCnRationalNode.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTCnIntegerNode.cpp.o --- [ 88%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCnIntegerNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCnIntegerNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTCnIntegerNode.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTCnRationalNode.cpp.o --- [ 88%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCnRationalNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCnRationalNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTCnRationalNode.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTCnRealNode.cpp.o --- [ 88%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCnRealNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCnRealNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTCnRealNode.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTConstantNumberNode.cpp.o --- [ 89%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTConstantNumberNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTConstantNumberNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTConstantNumberNode.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTFunction.cpp.o --- [ 89%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTFunction.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTFunction.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTFunction.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTFunctionBase.cpp.o --- [ 89%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTFunctionBase.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTFunctionBase.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTFunctionBase.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTLambdaFunctionNode.cpp.o --- [ 89%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTLambdaFunctionNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTLambdaFunctionNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTLambdaFunctionNode.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTNaryFunctionNode.cpp.o --- [ 89%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTNaryFunctionNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTNaryFunctionNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTNaryFunctionNode.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTNode.cpp.o --- [ 90%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTNode.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTNumber.cpp.o --- [ 90%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTNumber.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTNumber.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTNumber.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTPiecewiseFunctionNode.cpp.o --- [ 90%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTPiecewiseFunctionNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTPiecewiseFunctionNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTPiecewiseFunctionNode.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTQualifierNode.cpp.o --- [ 90%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTQualifierNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTQualifierNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTQualifierNode.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTSemanticsNode.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTTypes.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTSemanticsNode.cpp.o --- [ 90%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTSemanticsNode.cpp.o --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTTypes.cpp.o --- [ 91%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTTypes.cpp.o --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTSemanticsNode.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTSemanticsNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTSemanticsNode.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTTypes.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTTypes.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTTypes.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/ASTUnaryFunctionNode.cpp.o --- [ 91%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTUnaryFunctionNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTUnaryFunctionNode.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/ASTUnaryFunctionNode.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/L3Parser.cpp.o --- [ 91%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/L3Parser.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/L3Parser.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/L3Parser.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/L3ParserSettings.cpp.o --- [ 91%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/L3ParserSettings.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/L3ParserSettings.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/L3ParserSettings.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/MathML.cpp.o --- [ 92%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/MathML.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/math/MathML.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/MathML.cpp --- src/CMakeFiles/sbml-static.dir/sbml/math/FormulaFormatter.c.o --- [ 92%] Building C object src/CMakeFiles/sbml-static.dir/sbml/math/FormulaFormatter.c.o cd /construction/biology/libsbml/.build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -o CMakeFiles/sbml-static.dir/sbml/math/FormulaFormatter.c.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/FormulaFormatter.c --- src/CMakeFiles/sbml-static.dir/sbml/math/FormulaParser.c.o --- [ 92%] Building C object src/CMakeFiles/sbml-static.dir/sbml/math/FormulaParser.c.o cd /construction/biology/libsbml/.build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -o CMakeFiles/sbml-static.dir/sbml/math/FormulaParser.c.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/FormulaParser.c --- src/CMakeFiles/sbml-static.dir/sbml/math/FormulaTokenizer.c.o --- [ 92%] Building C object src/CMakeFiles/sbml-static.dir/sbml/math/FormulaTokenizer.c.o cd /construction/biology/libsbml/.build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX 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-I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -o CMakeFiles/sbml-static.dir/sbml/math/L3FormulaFormatter.c.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/math/L3FormulaFormatter.c --- src/CMakeFiles/sbml-static.dir/sbml/compress/CompressCommon.cpp.o --- [ 93%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/CompressCommon.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/compress/CompressCommon.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/compress/CompressCommon.cpp --- src/CMakeFiles/sbml-static.dir/sbml/compress/InputDecompressor.cpp.o --- [ 93%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/InputDecompressor.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/compress/InputDecompressor.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/compress/InputDecompressor.cpp --- src/CMakeFiles/sbml-static.dir/sbml/compress/OutputCompressor.cpp.o --- [ 93%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/OutputCompressor.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/compress/OutputCompressor.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/compress/OutputCompressor.cpp --- src/CMakeFiles/sbml-static.dir/sbml/compress/bzfstream.cpp.o --- [ 93%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/bzfstream.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/compress/bzfstream.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/compress/bzfstream.cpp --- src/CMakeFiles/sbml-static.dir/sbml/compress/zip.c.o --- [ 93%] Building C object src/CMakeFiles/sbml-static.dir/sbml/compress/zip.c.o cd /construction/biology/libsbml/.build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -o CMakeFiles/sbml-static.dir/sbml/compress/zip.c.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/compress/zip.c --- src/CMakeFiles/sbml-static.dir/sbml/compress/unzip.c.o --- [ 94%] Building C object src/CMakeFiles/sbml-static.dir/sbml/compress/unzip.c.o cd /construction/biology/libsbml/.build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -o CMakeFiles/sbml-static.dir/sbml/compress/unzip.c.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/compress/unzip.c --- src/CMakeFiles/sbml-static.dir/sbml/compress/ioapi.c.o --- [ 94%] Building C object src/CMakeFiles/sbml-static.dir/sbml/compress/ioapi.c.o cd /construction/biology/libsbml/.build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -o CMakeFiles/sbml-static.dir/sbml/compress/ioapi.c.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/compress/ioapi.c --- src/CMakeFiles/sbml-static.dir/sbml/compress/ioapi_mem.c.o --- [ 94%] Building C object src/CMakeFiles/sbml-static.dir/sbml/compress/ioapi_mem.c.o cd /construction/biology/libsbml/.build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -o CMakeFiles/sbml-static.dir/sbml/compress/ioapi_mem.c.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/compress/ioapi_mem.c --- src/CMakeFiles/sbml-static.dir/sbml/compress/zfstream.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/compress/zipfstream.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/compress/zfstream.cpp.o --- [ 94%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/zfstream.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/compress/zfstream.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/compress/zfstream.cpp --- src/CMakeFiles/sbml-static.dir/sbml/compress/zipfstream.cpp.o --- [ 95%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/zipfstream.cpp.o --- src/CMakeFiles/sbml-static.dir/sbml/xml/XMLAttributes.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/compress/zipfstream.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/compress/zipfstream.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/compress/zipfstream.cpp --- src/CMakeFiles/sbml-static.dir/sbml/xml/XMLAttributes.cpp.o --- [ 95%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLAttributes.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLAttributes.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLAttributes.cpp --- src/CMakeFiles/sbml-static.dir/sbml/xml/XMLBuffer.cpp.o --- [ 95%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLBuffer.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLBuffer.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLBuffer.cpp --- src/CMakeFiles/sbml-static.dir/sbml/xml/XMLConstructorException.cpp.o --- [ 95%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLConstructorException.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLConstructorException.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLConstructorException.cpp --- src/CMakeFiles/sbml-static.dir/sbml/xml/XMLError.cpp.o --- [ 95%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLError.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLError.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLError.cpp --- src/CMakeFiles/sbml-static.dir/sbml/xml/XMLErrorLog.cpp.o --- [ 96%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLErrorLog.cpp.o --- src/CMakeFiles/sbml-static.dir/sbml/xml/XMLLogOverride.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/xml/XMLErrorLog.cpp.o --- cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLErrorLog.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLErrorLog.cpp --- src/CMakeFiles/sbml-static.dir/sbml/xml/XMLLogOverride.cpp.o --- [ 96%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLLogOverride.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLLogOverride.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLLogOverride.cpp --- src/CMakeFiles/sbml-static.dir/sbml/xml/XMLFileBuffer.cpp.o --- [ 96%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLFileBuffer.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLFileBuffer.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLFileBuffer.cpp --- src/CMakeFiles/sbml-static.dir/sbml/xml/XMLHandler.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/xml/XMLInputStream.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/xml/XMLHandler.cpp.o --- [ 96%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLHandler.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLHandler.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLHandler.cpp --- src/CMakeFiles/sbml-static.dir/sbml/xml/XMLInputStream.cpp.o --- [ 96%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLInputStream.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLInputStream.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLInputStream.cpp --- src/CMakeFiles/sbml-static.dir/sbml/xml/XMLMemoryBuffer.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/xml/XMLNamespaces.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/xml/XMLMemoryBuffer.cpp.o --- [ 97%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLMemoryBuffer.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLMemoryBuffer.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLMemoryBuffer.cpp --- src/CMakeFiles/sbml-static.dir/sbml/xml/XMLNamespaces.cpp.o --- [ 97%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLNamespaces.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLNamespaces.cpp.o -c /construction/biology/libsbml/libsbml-5.17.0/src/sbml/xml/XMLNamespaces.cpp --- src/CMakeFiles/sbml-static.dir/sbml/xml/XMLNode.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/xml/XMLOutputStream.cpp.o --- --- src/CMakeFiles/sbml-static.dir/sbml/xml/XMLNode.cpp.o --- [ 97%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLNode.cpp.o cd /construction/biology/libsbml/.build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_LIBXML -DUSE_ZLIB -I/construction/biology/libsbml/.build/src/src/sbml -I/construction/biology/libsbml/.build/src/src -I/construction/biology/libsbml/.build/src -I/construction/biology/libsbml/libsbml-5.17.0/src -I/construction/biology/libsbml/libsbml-5.17.0/src/sbml -I/usr/local/include/libxml2 -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -fno-strict-aliasing -fPIC -pipe -I/usr/include -DLIBICONV_PLUG -O2 -fno-strict-aliasing -DLIBICONV_PLUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLNode.cpp.o -c 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/construction/biology/libsbml/stage/usr/local/include/sbml/extension/RegisterExtensions.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTBase.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTBinaryFunctionNode.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTCSymbol.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTCSymbolAvogadroNode.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTCSymbolDelayNode.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTCSymbolRateOfNode.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTCSymbolTimeNode.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTCiFunctionNode.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTCiNumberNode.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTCnBase.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTCnExponentialNode.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTCnIntegerNode.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTCnRationalNode.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTCnRealNode.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTConstantNumberNode.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTFunction.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTFunctionBase.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTLambdaFunctionNode.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTNaryFunctionNode.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTNode.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTNumber.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTPiecewiseFunctionNode.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTQualifierNode.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTSemanticsNode.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTTypes.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/ASTUnaryFunctionNode.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/FormulaFormatter.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/FormulaParser.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/FormulaTokenizer.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/L3FormulaFormatter.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/L3Parser.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/L3ParserSettings.h -- Installing: /construction/biology/libsbml/stage/usr/local/include/sbml/math/MathML.h -- Installing: /construction/biology/libsbml/stage/usr/local/lib/libsbml.so.5.17.0 -- Installing: /construction/biology/libsbml/stage/usr/local/lib/libsbml.so.5 -- Installing: /construction/biology/libsbml/stage/usr/local/lib/libsbml.so -- Installing: /construction/biology/libsbml/stage/usr/local/lib/cmake/sbml-config.cmake -- Installing: /construction/biology/libsbml/stage/usr/local/lib/cmake/sbml-config-release.cmake -- Installing: /construction/biology/libsbml/stage/usr/local/lib/cmake/sbml-config-version.cmake -- Installing: /construction/biology/libsbml/stage/usr/local/lib/libsbml-static.a -- Installing: /construction/biology/libsbml/stage/usr/local/lib/cmake/sbml-static-config.cmake -- Installing: /construction/biology/libsbml/stage/usr/local/lib/cmake/sbml-static-config-release.cmake -- Installing: /construction/biology/libsbml/stage/usr/local/lib/cmake/sbml-static-config-version.cmake /bin/mkdir -p /construction/biology/libsbml/stage/usr/local/share/examples/libsbml cd /construction/biology/libsbml/libsbml-5.17.0/examples && /bin/sh -c '(/usr/bin/find -Ed $1 $3 | /usr/bin/cpio -dumpl $2 >/dev/null 2>&1) && /usr/bin/find -Ed $1 $3 \( -type d -exec /bin/sh -c '\''cd '\''$2'\'' && chmod 755 "$@"'\'' . {} + -o -type f -exec /bin/sh -c '\''cd '\''$2'\'' && chmod 0644 "$@"'\'' . {} + \)' COPYTREE_SHARE . /construction/biology/libsbml/stage/usr/local/share/examples/libsbml '! -name *Makefile*' ====> Compressing man pages (compress-man) -------------------------------------------------------------------------------- -- Phase: package -------------------------------------------------------------------------------- ===> Building package for libsbml-5.17.0 file sizes/checksums [540]: ...... done packing files [540]: ...... done packing directories [0]: . done -------------------------------------------------- -- Termination -------------------------------------------------- Finished: Thursday, 30 AUG 2018 at 10:57:03 UTC Duration: 00:01:54