=> Building biology/seqio build started at Tue Oct 4 14:47:33 PDT 2016 port directory: /usr/ports/biology/seqio building for: DragonFly pkgbox64.dragonflybsd.org 4.7-DEVELOPMENT DragonFly v4.7.0.78.g7d868-DEVELOPMENT #7: Mon Aug 1 22:25:32 PDT 2016 root@pkgbox64.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 maintained by: ports@FreeBSD.org ident warning: no id keywords in /build/boomdata/data/.m/bleeding-edge-default/ref/../08//usr/ports/biology/seqio/Makefile Makefile ident: Poudriere version: 3.1-pre Host OSVERSION: 400700 Jail OSVERSION: 400702 !!! Jail is newer than host. (Jail: 400702, Host: 400700) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- STATUS=1 SAVED_TERM=screen MASTERMNT=/build/boomdata/data/.m/bleeding-edge-default/ref PATH=/usr/local/libexec/poudriere:/sbin:/bin:/usr/sbin:/usr/bin:/usr/pkg/bin:/usr/pkg/sbin:/usr/games:/usr/local/sbin:/usr/local/bin:/usr/pkg/xorg/bin:/usr/X11R6/bin:/root/bin:/sbin:/usr/sbin POUDRIERE_BUILD_TYPE=bulk PKGNAME=seqio-1.2.2_1 OLDPWD=/root/boom PWD=/build/boomdata/data/.m/bleeding-edge-default/ref/.p/pool MASTERNAME=bleeding-edge-default TERM=cons25 USER=root HOME=/root POUDRIERE_VERSION=3.1-pre LOCALBASE=/usr/local PACKAGE_BUILDING=yes ---End Environment--- ---Begin OPTIONS List--- ===> The following configuration options are available for seqio-1.2.2_1: DOCS=on: Build and/or install documentation EXAMPLES=on: Build and/or install examples ===> Use 'make config' to modify these settings ---End OPTIONS List--- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- XDG_DATA_HOME=/wrkdirs/biology/seqio XDG_CONFIG_HOME=/wrkdirs/biology/seqio HOME=/wrkdirs/biology/seqio TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc50 --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/biology/seqio XDG_CONFIG_HOME=/wrkdirs/biology/seqio HOME=/wrkdirs/biology/seqio TMPDIR="/tmp" NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc50 PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS="" LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 444" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- OSREL=4.7 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local PORTDOCS="" PORTEXAMPLES="" LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/seqio" EXAMPLESDIR="share/examples/seqio" DATADIR="share/seqio" WWWDIR="www/seqio" ETCDIR="etc/seqio" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/seqio DOCSDIR=/usr/local/share/doc/seqio EXAMPLESDIR=/usr/local/share/examples/seqio WWWDIR=/usr/local/www/seqio ETCDIR=/usr/local/etc/seqio --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs NO_BACKUP=yes USE_PACKAGE_DEPENDS=yes PKG_CREATE_VERBOSE=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORT_DBDIR=/options PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles MAKE_JOBS_NUMBER=5 ---End make.conf--- =================================================== ===> NOTICE: The seqio port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port =========================================================================== =================================================== ===> seqio-1.2.2_1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.8.7_3.txz Installing pkg-1.8.7_3... Extracting pkg-1.8.7_3: .......... done ===> seqio-1.2.2_1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of seqio-1.2.2_1 =========================================================================== =================================================== =========================================================================== =================================================== ===> NOTICE: The seqio port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> Fetching all distfiles required by seqio-1.2.2_1 for building =========================================================================== =================================================== ===> NOTICE: The seqio port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> Fetching all distfiles required by seqio-1.2.2_1 for building => SHA256 Checksum OK for seqio.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> NOTICE: The seqio port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> Fetching all distfiles required by seqio-1.2.2_1 for building ===> Extracting for seqio-1.2.2_1 => SHA256 Checksum OK for seqio.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for seqio-1.2.2_1 ===> Applying ports patches for seqio-1.2.2_1 =========================================================================== =================================================== =========================================================================== =================================================== =========================================================================== =================================================== ===> Configuring for seqio-1.2.2_1 =========================================================================== =================================================== ===> Building for seqio-1.2.2_1 --- grepseq.o --- --- seqio.o --- --- fmtseq.o --- --- idxseq.o --- --- typeseq.o --- --- grepseq.o --- cc -pipe -O2 -fno-strict-aliasing -c grepseq.c --- seqio.o --- cc -pipe -O2 -fno-strict-aliasing -c seqio.c --- fmtseq.o --- cc -pipe -O2 -fno-strict-aliasing -c fmtseq.c --- idxseq.o --- cc -pipe -O2 -fno-strict-aliasing -c idxseq.c --- typeseq.o --- cc -pipe -O2 -fno-strict-aliasing -c typeseq.c --- wcseq.o --- cc -pipe -O2 -fno-strict-aliasing -c wcseq.c --- grepseq --- --- fmtseq --- --- idxseq --- --- typeseq --- --- wcseq --- --- grepseq --- cc -pipe -O2 -fno-strict-aliasing -o grepseq grepseq.o seqio.o --- fmtseq --- cc -pipe -O2 -fno-strict-aliasing -o fmtseq fmtseq.o seqio.o --- idxseq --- cc -pipe -O2 -fno-strict-aliasing -o idxseq idxseq.o seqio.o --- typeseq --- cc -pipe -O2 -fno-strict-aliasing -o typeseq typeseq.o seqio.o --- wcseq --- cc -pipe -O2 -fno-strict-aliasing -o wcseq wcseq.o seqio.o =========================================================================== =================================================== =========================================================================== =================================================== ===> Staging for seqio-1.2.2_1 ===> Generating temporary packing list install -s -m 555 /wrkdirs/biology/seqio/seqio-1.2.2/fmtseq /wrkdirs/biology/seqio/seqio-1.2.2/grepseq /wrkdirs/biology/seqio/seqio-1.2.2/idxseq /wrkdirs/biology/seqio/seqio-1.2.2/typeseq /wrkdirs/biology/seqio/seqio-1.2.2/wcseq /wrkdirs/biology/seqio/stage/usr/local/bin install -m 0644 /wrkdirs/biology/seqio/seqio-1.2.2/example1.c /wrkdirs/biology/seqio/seqio-1.2.2/example2.c /wrkdirs/biology/seqio/seqio-1.2.2/example3.c /wrkdirs/biology/seqio/seqio-1.2.2/example4.c /wrkdirs/biology/seqio/seqio-1.2.2/seqio.c /wrkdirs/biology/seqio/seqio-1.2.2/seqio.h /wrkdirs/biology/seqio/seqio-1.2.2/Makefile /wrkdirs/biology/seqio/stage/usr/local/share/examples/seqio install -m 0644 /wrkdirs/biology/seqio/seqio-1.2.2/bioseq.txt /wrkdirs/biology/seqio/stage/usr/local/share/doc/seqio install -m 0644 /wrkdirs/biology/seqio/seqio-1.2.2/doc/*.doc /wrkdirs/biology/seqio/stage/usr/local/share/doc/seqio install -m 0644 /wrkdirs/biology/seqio/seqio-1.2.2/html/*.html /wrkdirs/biology/seqio/stage/usr/local/share/doc/seqio/html ====> Compressing man pages (compress-man) =========================================================================== =================================================== ===> Building package for seqio-1.2.2_1 file sizes/checksums [36]: . done packing files [36]: . done packing directories [0]: . done =========================================================================== => Cleaning up wrkdir ===> Cleaning for seqio-1.2.2_1 build of biology/seqio ended at Tue Oct 4 14:48:15 PDT 2016 build time: 00:00:42