=> Building biology/phylip build started at Tue Oct 4 23:41:06 PDT 2016 port directory: /usr/ports/biology/phylip building for: DragonFly pkgbox64.dragonflybsd.org 4.7-DEVELOPMENT DragonFly v4.7.0.78.g7d868-DEVELOPMENT #7: Mon Aug 1 22:25:32 PDT 2016 root@pkgbox64.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 maintained by: ports@FreeBSD.org ident warning: no id keywords in /build/boomdata/data/.m/bleeding-edge-default/ref/../09//usr/ports/biology/phylip/Makefile Makefile ident: Poudriere version: 3.1-pre Host OSVERSION: 400700 Jail OSVERSION: 400702 !!! Jail is newer than host. (Jail: 400702, Host: 400700) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- STATUS=1 SAVED_TERM=screen MASTERMNT=/build/boomdata/data/.m/bleeding-edge-default/ref PATH=/usr/local/libexec/poudriere:/sbin:/bin:/usr/sbin:/usr/bin:/usr/pkg/bin:/usr/pkg/sbin:/usr/games:/usr/local/sbin:/usr/local/bin:/usr/pkg/xorg/bin:/usr/X11R6/bin:/root/bin:/sbin:/usr/sbin POUDRIERE_BUILD_TYPE=bulk PKGNAME=phylip-3.696,1 OLDPWD=/root/boom PWD=/build/boomdata/data/.m/bleeding-edge-default/ref/.p/pool MASTERNAME=bleeding-edge-default TERM=cons25 USER=root HOME=/root POUDRIERE_VERSION=3.1-pre LOCALBASE=/usr/local PACKAGE_BUILDING=yes ---End Environment--- ---Begin OPTIONS List--- ===> The following configuration options are available for phylip-3.696,1: DOCS=on: Build and/or install documentation ===> Use 'make config' to modify these settings ---End OPTIONS List--- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- MAKE=gmake XDG_DATA_HOME=/wrkdirs/biology/phylip XDG_CONFIG_HOME=/wrkdirs/biology/phylip HOME=/wrkdirs/biology/phylip TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc50 --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/biology/phylip XDG_CONFIG_HOME=/wrkdirs/biology/phylip HOME=/wrkdirs/biology/phylip TMPDIR="/tmp" NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc50 PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS="" LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 444" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- OSREL=4.7 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local PORTDOCS="" PORTEXAMPLES="" LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/phylip" EXAMPLESDIR="share/examples/phylip" DATADIR="share/phylip" WWWDIR="www/phylip" ETCDIR="etc/phylip" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/phylip DOCSDIR=/usr/local/share/doc/phylip EXAMPLESDIR=/usr/local/share/examples/phylip WWWDIR=/usr/local/www/phylip ETCDIR=/usr/local/etc/phylip --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs NO_BACKUP=yes USE_PACKAGE_DEPENDS=yes PKG_CREATE_VERBOSE=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORT_DBDIR=/options PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles MAKE_JOBS_NUMBER=5 ---End make.conf--- =================================================== ===> NOTICE: The phylip port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License BSD2CLAUSE accepted by the user =========================================================================== =================================================== ===> phylip-3.696,1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.8.7_3.txz Installing pkg-1.8.7_3... Extracting pkg-1.8.7_3: .......... done ===> phylip-3.696,1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of phylip-3.696,1 =========================================================================== =================================================== =========================================================================== =================================================== ===> NOTICE: The phylip port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License BSD2CLAUSE accepted by the user ===> Fetching all distfiles required by phylip-3.696,1 for building =========================================================================== =================================================== ===> NOTICE: The phylip port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License BSD2CLAUSE accepted by the user ===> Fetching all distfiles required by phylip-3.696,1 for building => SHA256 Checksum OK for phylip-3.696.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> NOTICE: The phylip port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License BSD2CLAUSE accepted by the user ===> Fetching all distfiles required by phylip-3.696,1 for building ===> Extracting for phylip-3.696,1 => SHA256 Checksum OK for phylip-3.696.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for phylip-3.696,1 =========================================================================== =================================================== ===> phylip-3.696,1 depends on executable: bash - not found ===> Installing existing package /packages/All/bash-4.3.46_1.txz Installing bash-4.3.46_1... `-- Installing indexinfo-0.2.5... `-- Extracting indexinfo-0.2.5: .... done `-- Installing gettext-runtime-0.19.8.1... `-- Extracting gettext-runtime-0.19.8.1: .......... done Extracting bash-4.3.46_1: .......... done ===> phylip-3.696,1 depends on executable: bash - found ===> Returning to build of phylip-3.696,1 ===> phylip-3.696,1 depends on executable: gmake - not found ===> Installing existing package /packages/All/gmake-4.2.1_1.txz Installing gmake-4.2.1_1... Extracting gmake-4.2.1_1: .......... done ===> phylip-3.696,1 depends on executable: gmake - found ===> Returning to build of phylip-3.696,1 ===> phylip-3.696,1 depends on file: /usr/local/libdata/pkgconfig/x11.pc - not found ===> Installing existing package /packages/All/libX11-1.6.3,1.txz Installing libX11-1.6.3,1... `-- Installing xproto-7.0.28... `-- Extracting xproto-7.0.28: .......... done `-- Installing kbproto-1.0.7... `-- Extracting kbproto-1.0.7: .......... done `-- Installing libXdmcp-1.1.2... `-- Extracting libXdmcp-1.1.2: ......... done `-- Installing libxcb-1.11.1... | `-- Installing libxml2-2.9.4... | `-- Extracting libxml2-2.9.4: .......... done | `-- Installing libpthread-stubs-0.3_6... | `-- Extracting libpthread-stubs-0.3_6: ..... done | `-- Installing libXau-1.0.8_3... | `-- Extracting libXau-1.0.8_3: .......... done `-- Extracting libxcb-1.11.1: .......... done Extracting libX11-1.6.3,1: .......... done ===> phylip-3.696,1 depends on file: /usr/local/libdata/pkgconfig/x11.pc - found ===> Returning to build of phylip-3.696,1 ===> phylip-3.696,1 depends on file: /usr/local/libdata/pkgconfig/xaw7.pc - not found ===> Installing existing package /packages/All/libXaw-1.0.13,2.txz Installing libXaw-1.0.13,2... `-- Installing libXpm-3.5.11_4... | `-- Installing libXt-1.1.5,1... | | `-- Installing libSM-1.2.2_3,1... | | `-- Installing libICE-1.0.9_1,1... | | `-- Extracting libICE-1.0.9_1,1: .......... done | | `-- Extracting libSM-1.2.2_3,1: .......... done | `-- Extracting libXt-1.1.5,1: .......... done | `-- Installing libXext-1.3.3_1,1... | | `-- Installing xextproto-7.3.0... | | `-- Extracting xextproto-7.3.0: .......... done | `-- Extracting libXext-1.3.3_1,1: .......... done `-- Extracting libXpm-3.5.11_4: .......... done `-- Installing libXmu-1.1.2_3,1... `-- Extracting libXmu-1.1.2_3,1: .......... done `-- Installing printproto-1.0.5... `-- Extracting printproto-1.0.5: .... done `-- Installing libXp-1.0.3,1... `-- Extracting libXp-1.0.3,1: .......... done Extracting libXaw-1.0.13,2: .......... done ===> phylip-3.696,1 depends on file: /usr/local/libdata/pkgconfig/xaw7.pc - found ===> Returning to build of phylip-3.696,1 ===> phylip-3.696,1 depends on file: /usr/local/libdata/pkgconfig/xt.pc - found =========================================================================== =================================================== =========================================================================== =================================================== ===> Configuring for phylip-3.696,1 =========================================================================== =================================================== ===> Building for phylip-3.696,1 gmake[1]: Entering directory '/wrkdirs/biology/phylip/phylip-3.696/src' cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o clique.o clique.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o disc.o disc.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o phylip.o phylip.c Building PHYLIP version 3.696 cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o consense.o consense.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o cons.o cons.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o contml.o contml.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o cont.o cont.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o contrast.o contrast.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o dnacomp.o dnacomp.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o seq.o seq.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o dnadist.o dnadist.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o dnainvar.o dnainvar.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o dnaml.o dnaml.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o dnamlk.o dnamlk.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o mlclock.o mlclock.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o printree.o printree.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o dnamove.o dnamove.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o moves.o moves.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o dnapars.o dnapars.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o dnapenny.o dnapenny.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o dolmove.o dolmove.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o dollo.o dollo.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o dollop.o dollop.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o dolpenny.o dolpenny.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o factor.o factor.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o fitch.o fitch.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o dist.o dist.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o gendist.o gendist.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o kitsch.o kitsch.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o mix.o mix.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o wagner.o wagner.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o move.o move.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o neighbor.o neighbor.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o pars.o pars.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o discrete.o discrete.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o penny.o penny.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o proml.o proml.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o promlk.o promlk.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o protdist.o protdist.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o protpars.o protpars.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o restdist.o restdist.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o restml.o restml.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o retree.o retree.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o seqboot.o seqboot.c cc -pipe -O2 -fno-strict-aliasing -DUNX -c -o treedist.o treedist.c cc -pipe -O2 -fno-strict-aliasing -DX -I/usr/local/include -c drawgram.c drawgram.c: In function 'drawgram': drawgram.c:2111:9: warning: implicit declaration of function 'makebox' [-Wimplicit-function-declaration] makebox(fontname,&xoffset,&yoffset,&scale,spp); ^ cc -pipe -O2 -fno-strict-aliasing -DX -I/usr/local/include -c draw.c draw.c: In function 'metricforfont': draw.c:2532:42: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = helvetica_metric[i-31]; ^ draw.c:2531:5: note: containing loop for (i=31;i<256;++i) ^ draw.c:2536:46: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = helveticabold_metric[i-31]; ^ draw.c:2535:5: note: containing loop for (i=31;i<256;++i) ^ draw.c:2539:43: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = timesroman_metric[i-31]; ^ draw.c:2538:5: note: containing loop for (i=31;i<256;++i) ^ draw.c:2542:43: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = timesroman_metric[i-31]; ^ draw.c:2541:5: note: containing loop for (i=31;i<256;++i) ^ draw.c:2545:44: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = timesitalic_metric[i-31]; ^ draw.c:2544:5: note: containing loop for (i=31;i<256;++i) ^ draw.c:2548:42: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = timesbold_metric[i-31]; ^ draw.c:2547:5: note: containing loop for (i=31;i<256;++i) ^ draw.c:2551:48: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = timesbolditalic_metric[i-31]; ^ draw.c:2550:5: note: containing loop for (i=31;i<256;++i) ^ draw.c:2591:49: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = timesroman_metric[i-31], ^ draw.c:2590:11: note: containing loop for (i=31;i<256;++i) ^ draw.c:2603:53: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = timesroman_metric[i-31], ^ draw.c:2602:15: note: containing loop for (i=31;i<256;++i) ^ cc -pipe -O2 -fno-strict-aliasing -DX -I/usr/local/include -c draw2.c cc -pipe -O2 -fno-strict-aliasing -DX -I/usr/local/include -shared -fPIC -c drawtree.c drawtree.c: In function 'drawtree': drawtree.c:3017:9: warning: implicit declaration of function 'makebox' [-Wimplicit-function-declaration] makebox(fontname,&xoffset,&yoffset,&scale,spp); ^ cc -pipe -O2 -fno-strict-aliasing -DUNX clique.o disc.o phylip.o -lm -o clique cc -pipe -O2 -fno-strict-aliasing -DUNX consense.o phylip.o cons.o -lm -o consense cc -pipe -O2 -fno-strict-aliasing -DUNX contml.o cont.o phylip.o -lm -o contml cc -pipe -O2 -fno-strict-aliasing -DUNX contrast.o cont.o phylip.o -lm -o contrast cc -pipe -O2 -fno-strict-aliasing -DUNX dnacomp.o seq.o phylip.o -lm -o dnacomp cc -pipe -O2 -fno-strict-aliasing -DUNX dnadist.o seq.o phylip.o -lm -o dnadist cc -pipe -O2 -fno-strict-aliasing -DUNX dnainvar.o seq.o phylip.o -lm -o dnainvar cc -pipe -O2 -fno-strict-aliasing -DUNX dnaml.o seq.o phylip.o -lm -o dnaml cc -pipe -O2 -fno-strict-aliasing -DUNX dnamlk.o seq.o phylip.o mlclock.o printree.o -lm -o dnamlk cc -pipe -O2 -fno-strict-aliasing -DUNX dnamove.o seq.o moves.o phylip.o -lm -o dnamove cc -pipe -O2 -fno-strict-aliasing -DUNX dnapars.o seq.o phylip.o -lm -o dnapars cc -pipe -O2 -fno-strict-aliasing -DUNX dnapenny.o seq.o phylip.o -lm -o dnapenny cc -pipe -O2 -fno-strict-aliasing -DUNX dolmove.o disc.o moves.o dollo.o phylip.o -lm -o dolmove cc -pipe -O2 -fno-strict-aliasing -DUNX dollop.o disc.o dollo.o phylip.o -lm -o dollop cc -pipe -O2 -fno-strict-aliasing -DUNX dolpenny.o disc.o dollo.o phylip.o -lm -o dolpenny cc -pipe -O2 -fno-strict-aliasing -DUNX factor.o phylip.o -lm -o factor cc -pipe -O2 -fno-strict-aliasing -DUNX fitch.o dist.o phylip.o -lm -o fitch cc -pipe -O2 -fno-strict-aliasing -DUNX gendist.o phylip.o -lm -o gendist cc -pipe -O2 -fno-strict-aliasing -DUNX kitsch.o dist.o phylip.o -lm -o kitsch cc -pipe -O2 -fno-strict-aliasing -DUNX mix.o disc.o wagner.o phylip.o -lm -o mix cc -pipe -O2 -fno-strict-aliasing -DUNX move.o disc.o moves.o wagner.o phylip.o -lm -o move cc -pipe -O2 -fno-strict-aliasing -DUNX neighbor.o dist.o phylip.o -lm -o neighbor cc -pipe -O2 -fno-strict-aliasing -DUNX pars.o discrete.o phylip.o -lm -o pars cc -pipe -O2 -fno-strict-aliasing -DUNX penny.o disc.o wagner.o phylip.o -lm -o penny cc -pipe -O2 -fno-strict-aliasing -DUNX proml.o seq.o phylip.o -lm -o proml cc -pipe -O2 -fno-strict-aliasing -DUNX promlk.o seq.o phylip.o mlclock.o printree.o -lm -o promlk cc -pipe -O2 -fno-strict-aliasing -DUNX protdist.o seq.o phylip.o -lm -o protdist cc -pipe -O2 -fno-strict-aliasing -DUNX protpars.o seq.o phylip.o -lm -o protpars cc -pipe -O2 -fno-strict-aliasing -DUNX restdist.o seq.o phylip.o -lm -o restdist cc -pipe -O2 -fno-strict-aliasing -DUNX restml.o seq.o phylip.o -lm -o restml cc -pipe -O2 -fno-strict-aliasing -DUNX retree.o moves.o phylip.o -lm -o retree cc -pipe -O2 -fno-strict-aliasing -DUNX seqboot.o seq.o phylip.o -lm -o seqboot cc -pipe -O2 -fno-strict-aliasing -DUNX treedist.o cons.o phylip.o -lm -o treedist cc -pipe -O2 -fno-strict-aliasing -DX -I/usr/local/include draw.o draw2.o drawgram.o phylip.o -L/usr/local/lib -lX11 -lXaw -lXt -lm -o drawgram cc -pipe -O2 -fno-strict-aliasing -DX -I/usr/local/include draw.o draw2.o drawtree.o phylip.o -L/usr/local/lib -lX11 -lXaw -lXt -lm -o drawtree cc -pipe -O2 -fno-strict-aliasing -DUNX -o libdrawgram.so -shared -fPIC drawgram.c draw.c draw2.c phylip.c cc -pipe -O2 -fno-strict-aliasing -DUNX -o libdrawtree.so -shared -fPIC drawtree.c draw.c draw2.c phylip.c drawgram.c: In function 'drawgram': drawgram.c:2111:9: warning: implicit declaration of function 'makebox' [-Wimplicit-function-declaration] makebox(fontname,&xoffset,&yoffset,&scale,spp); ^ drawtree.c: In function 'drawtree': drawtree.c:3017:9: warning: implicit declaration of function 'makebox' [-Wimplicit-function-declaration] makebox(fontname,&xoffset,&yoffset,&scale,spp); ^ draw.c: In function 'metricforfont': draw.c:2532:42: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = helvetica_metric[i-31]; ^ draw.c:2531:5: note: containing loop for (i=31;i<256;++i) ^ draw.c:2536:46: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = helveticabold_metric[i-31]; ^ draw.c:2535:5: note: containing loop for (i=31;i<256;++i) ^ draw.c:2539:43: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = timesroman_metric[i-31]; ^ draw.c:2538:5: note: containing loop for (i=31;i<256;++i) ^ draw.c:2542:43: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = timesroman_metric[i-31]; ^ draw.c:2541:5: note: containing loop for (i=31;i<256;++i) ^ draw.c:2545:44: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = timesitalic_metric[i-31]; ^ draw.c:2544:5: note: containing loop for (i=31;i<256;++i) ^ draw.c:2548:42: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = timesbold_metric[i-31]; ^ draw.c:2547:5: note: containing loop for (i=31;i<256;++i) ^ draw.c:2551:48: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = timesbolditalic_metric[i-31]; ^ draw.c:2550:5: note: containing loop for (i=31;i<256;++i) ^ draw.c:2591:49: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = timesroman_metric[i-31], ^ draw.c:2590:11: note: containing loop for (i=31;i<256;++i) ^ draw.c:2603:53: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = timesroman_metric[i-31], ^ draw.c:2602:15: note: containing loop for (i=31;i<256;++i) ^ draw.c: In function 'metricforfont': draw.c:2532:42: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = helvetica_metric[i-31]; ^ draw.c:2531:5: note: containing loop for (i=31;i<256;++i) ^ draw.c:2536:46: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = helveticabold_metric[i-31]; ^ draw.c:2535:5: note: containing loop for (i=31;i<256;++i) ^ draw.c:2539:43: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = timesroman_metric[i-31]; ^ draw.c:2538:5: note: containing loop for (i=31;i<256;++i) ^ draw.c:2542:43: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = timesroman_metric[i-31]; ^ draw.c:2541:5: note: containing loop for (i=31;i<256;++i) ^ draw.c:2545:44: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = timesitalic_metric[i-31]; ^ draw.c:2544:5: note: containing loop for (i=31;i<256;++i) ^ draw.c:2548:42: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = timesbold_metric[i-31]; ^ draw.c:2547:5: note: containing loop for (i=31;i<256;++i) ^ draw.c:2551:48: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = timesbolditalic_metric[i-31]; ^ draw.c:2550:5: note: containing loop for (i=31;i<256;++i) ^ draw.c:2591:49: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = timesroman_metric[i-31], ^ draw.c:2590:11: note: containing loop for (i=31;i<256;++i) ^ draw.c:2603:53: warning: iteration 224u invokes undefined behavior [-Waggressive-loop-optimizations] fontmetric[i-31] = timesroman_metric[i-31], ^ draw.c:2602:15: note: containing loop for (i=31;i<256;++i) ^ Finished compiling. gmake[1]: Leaving directory '/wrkdirs/biology/phylip/phylip-3.696/src' =========================================================================== =================================================== ===> phylip-3.696,1 depends on file: /usr/local/libdata/pkgconfig/x11.pc - found ===> phylip-3.696,1 depends on file: /usr/local/libdata/pkgconfig/xaw7.pc - found ===> phylip-3.696,1 depends on file: /usr/local/libdata/pkgconfig/xt.pc - found =========================================================================== =================================================== ===> Staging for phylip-3.696,1 ===> Generating temporary packing list gmake[1]: Entering directory '/wrkdirs/biology/phylip/phylip-3.696/src' Building PHYLIP version 3.696 Finished compiling. Installing PHYLIP v3.6 binaries in ../exe Installing dynamic libraries in ../exe Installing jar files in ../exe Installing font files in ../exe Finished installation. Removing object files to save space Finished removing object files. Now will remove executable files from the current directory, but not from the executables directory. (If some are not here, the makefile will terminate with an error message but this is not a problem) Removing executables from this directory Finished cleanup. Done. gmake[1]: Leaving directory '/wrkdirs/biology/phylip/phylip-3.696/src' ====> Compressing man pages (compress-man) =========================================================================== =================================================== ===> Building package for phylip-3.696,1 file sizes/checksums [93]: . done packing files [93]: . done packing directories [0]: . done =========================================================================== => Cleaning up wrkdir ===> Cleaning for phylip-3.696,1 build of biology/phylip ended at Tue Oct 4 23:42:09 PDT 2016 build time: 00:01:03