=> Building biology/p5-Bio-NEXUS build started at Tue Oct 4 14:56:27 PDT 2016 port directory: /usr/ports/biology/p5-Bio-NEXUS building for: DragonFly pkgbox64.dragonflybsd.org 4.7-DEVELOPMENT DragonFly v4.7.0.78.g7d868-DEVELOPMENT #7: Mon Aug 1 22:25:32 PDT 2016 root@pkgbox64.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 maintained by: perl@FreeBSD.org ident warning: no id keywords in /build/boomdata/data/.m/bleeding-edge-default/ref/../10//usr/ports/biology/p5-Bio-NEXUS/Makefile Makefile ident: Poudriere version: 3.1-pre Host OSVERSION: 400700 Jail OSVERSION: 400702 !!! Jail is newer than host. (Jail: 400702, Host: 400700) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- STATUS=1 SAVED_TERM=screen MASTERMNT=/build/boomdata/data/.m/bleeding-edge-default/ref PATH=/usr/local/libexec/poudriere:/sbin:/bin:/usr/sbin:/usr/bin:/usr/pkg/bin:/usr/pkg/sbin:/usr/games:/usr/local/sbin:/usr/local/bin:/usr/pkg/xorg/bin:/usr/X11R6/bin:/root/bin:/sbin:/usr/sbin POUDRIERE_BUILD_TYPE=bulk PKGNAME=p5-Bio-NEXUS-0.78_1 OLDPWD=/root/boom PWD=/build/boomdata/data/.m/bleeding-edge-default/ref/.p/pool MASTERNAME=bleeding-edge-default TERM=cons25 USER=root HOME=/root POUDRIERE_VERSION=3.1-pre LOCALBASE=/usr/local PACKAGE_BUILDING=yes ---End Environment--- ---Begin OPTIONS List--- ---End OPTIONS List--- --CONFIGURE_ARGS-- INSTALLDIRS="site" CC="cc" CCFLAGS="-pipe -O2 -fno-strict-aliasing" PREFIX="/usr/local" INSTALLPRIVLIB="/usr/local/lib" INSTALLARCHLIB="/usr/local/lib" --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl XDG_DATA_HOME=/wrkdirs/biology/p5-Bio-NEXUS XDG_CONFIG_HOME=/wrkdirs/biology/p5-Bio-NEXUS HOME=/wrkdirs/biology/p5-Bio-NEXUS TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc50 PERL_EXTUTILS_AUTOINSTALL="--skipdeps" PERL_MM_USE_DEFAULT="YES" --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/biology/p5-Bio-NEXUS XDG_CONFIG_HOME=/wrkdirs/biology/p5-Bio-NEXUS HOME=/wrkdirs/biology/p5-Bio-NEXUS TMPDIR="/tmp" NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc50 PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS="" LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 444" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- OSREL=4.7 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local PORTDOCS="" PORTEXAMPLES="" LIB32DIR=lib PERL_VERSION=5.20.3 PERL_VER=5.20 PERL5_MAN1=lib/perl5/site_perl/man/man1 PERL5_MAN3=lib/perl5/site_perl/man/man3 SITE_PERL=lib/perl5/site_perl SITE_ARCH=lib/perl5/site_perl/mach/5.20 PROFILE="@comment " DOCSDIR="share/doc/Bio-NEXUS" EXAMPLESDIR="share/examples/Bio-NEXUS" DATADIR="share/Bio-NEXUS" WWWDIR="www/Bio-NEXUS" ETCDIR="etc/Bio-NEXUS" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/Bio-NEXUS DOCSDIR=/usr/local/share/doc/Bio-NEXUS EXAMPLESDIR=/usr/local/share/examples/Bio-NEXUS WWWDIR=/usr/local/www/Bio-NEXUS ETCDIR=/usr/local/etc/Bio-NEXUS --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs NO_BACKUP=yes USE_PACKAGE_DEPENDS=yes PKG_CREATE_VERBOSE=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORT_DBDIR=/options PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles MAKE_JOBS_NUMBER=5 ---End make.conf--- =================================================== =========================================================================== =================================================== ===> p5-Bio-NEXUS-0.78_1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.8.7_3.txz Installing pkg-1.8.7_3... Extracting pkg-1.8.7_3: .......... done ===> p5-Bio-NEXUS-0.78_1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of p5-Bio-NEXUS-0.78_1 =========================================================================== =================================================== =========================================================================== =================================================== ===> Fetching all distfiles required by p5-Bio-NEXUS-0.78_1 for building =========================================================================== =================================================== ===> Fetching all distfiles required by p5-Bio-NEXUS-0.78_1 for building => SHA256 Checksum OK for Bio-NEXUS-0.78.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Fetching all distfiles required by p5-Bio-NEXUS-0.78_1 for building ===> Extracting for p5-Bio-NEXUS-0.78_1 => SHA256 Checksum OK for Bio-NEXUS-0.78.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for p5-Bio-NEXUS-0.78_1 =========================================================================== =================================================== ===> p5-Bio-NEXUS-0.78_1 depends on package: p5-Clone-PP>=1.02 - not found ===> Installing existing package /packages/All/p5-Clone-PP-1.06_1.txz Installing p5-Clone-PP-1.06_1... `-- Installing perl5-5.20.3_15... `-- Extracting perl5-5.20.3_15: .......... done Extracting p5-Clone-PP-1.06_1: ....... done Message from perl5-5.20.3_15: The /usr/bin/perl symlink has been removed starting with Perl 5.20. For shebangs, you should either use: #!/usr/local/bin/perl or #!/usr/bin/env perl The first one will only work if you have a /usr/local/bin/perl, the second will work as long as perl is in PATH. ===> p5-Bio-NEXUS-0.78_1 depends on package: p5-Clone-PP>=1.02 - found ===> Returning to build of p5-Bio-NEXUS-0.78_1 ===> p5-Bio-NEXUS-0.78_1 depends on package: perl5>=5.20<5.21 - found =========================================================================== =================================================== =========================================================================== =================================================== ===> Configuring for p5-Bio-NEXUS-0.78_1 *** You don't seem to have Test::Deep installed. This means some functionality won't be available (though core functionality will be). Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for Bio::NEXUS Writing MYMETA.yml and MYMETA.json =========================================================================== =================================================== ===> Building for p5-Bio-NEXUS-0.78_1 --- blib/lib/Bio/.exists --- --- blib/arch/.exists --- --- blib/lib/auto/Bio/NEXUS/.exists --- --- blib/arch/auto/Bio/NEXUS/.exists --- --- blib/bin/.exists --- --- blib/script/.exists --- --- blib/man1/.exists --- --- blib/man3/.exists --- --- subdirs --- --- dynamic --- --- pm_to_blib --- --- linkext --- --- blib/script/nextool.pl --- --- blib/script/nexplot.pl --- --- blib/script/nex2text_tree.pl --- --- blib/script/nextool.pl --- cp exec/nextool.pl blib/script/nextool.pl --- blib/script/nexplot.pl --- cp exec/nexplot.pl blib/script/nexplot.pl --- blib/script/nextool.pl --- /usr/local/bin/perl5.20.3 -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/nextool.pl --- blib/script/nexplot.pl --- /usr/local/bin/perl5.20.3 -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/nexplot.pl --- blib/script/nex2text_tree.pl --- cp exec/nex2text_tree.pl blib/script/nex2text_tree.pl /usr/local/bin/perl5.20.3 -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/nex2text_tree.pl --- blibdirs --- --- config --- --- pure_all --- --- pm_to_blib --- cp lib/Bio/NEXUS.pm blib/lib/Bio/NEXUS.pm cp lib/Bio/NEXUS/AssumptionsBlock.pm blib/lib/Bio/NEXUS/AssumptionsBlock.pm cp lib/Bio/NEXUS/DistancesBlock.pm blib/lib/Bio/NEXUS/DistancesBlock.pm cp lib/Bio/NEXUS/UnalignedBlock.pm blib/lib/Bio/NEXUS/UnalignedBlock.pm cp lib/Bio/NEXUS/SpanBlock.pm blib/lib/Bio/NEXUS/SpanBlock.pm cp lib/Bio/NEXUS/DataBlock.pm blib/lib/Bio/NEXUS/DataBlock.pm cp lib/Bio/NEXUS/NHXCmd.pm blib/lib/Bio/NEXUS/NHXCmd.pm cp lib/Bio/NEXUS/Block.pm blib/lib/Bio/NEXUS/Block.pm cp lib/Bio/NEXUS/HistoryBlock.pm blib/lib/Bio/NEXUS/HistoryBlock.pm cp lib/Bio/NEXUS/CodonsBlock.pm blib/lib/Bio/NEXUS/CodonsBlock.pm cp lib/Bio/NEXUS/CharactersBlock.pm blib/lib/Bio/NEXUS/CharactersBlock.pm cp lib/Bio/NEXUS/TaxUnitSet.pm blib/lib/Bio/NEXUS/TaxUnitSet.pm cp lib/Bio/NEXUS/NotesBlock.pm blib/lib/Bio/NEXUS/NotesBlock.pm cp lib/Bio/NEXUS/Tree.pm blib/lib/Bio/NEXUS/Tree.pm cp lib/Bio/NEXUS/Tools/NexPlotter.pm blib/lib/Bio/NEXUS/Tools/NexPlotter.pm cp lib/Bio/NEXUS/TreesBlock.pm blib/lib/Bio/NEXUS/TreesBlock.pm cp lib/Bio/NEXUS/UnknownBlock.pm blib/lib/Bio/NEXUS/UnknownBlock.pm cp lib/Bio/NEXUS/Matrix.pm blib/lib/Bio/NEXUS/Matrix.pm cp lib/Bio/NEXUS/Tools/GraphicsParams.pm blib/lib/Bio/NEXUS/Tools/GraphicsParams.pm cp lib/Bio/NEXUS/Node.pm blib/lib/Bio/NEXUS/Node.pm cp lib/Bio/NEXUS/Functions.pm blib/lib/Bio/NEXUS/Functions.pm cp lib/Bio/NEXUS/SetsBlock.pm blib/lib/Bio/NEXUS/SetsBlock.pm cp lib/Bio/NEXUS/WeightSet.pm blib/lib/Bio/NEXUS/WeightSet.pm cp lib/Bio/NEXUS/TaxUnit.pm blib/lib/Bio/NEXUS/TaxUnit.pm cp lib/Bio/NEXUS/Util/Exceptions.pm blib/lib/Bio/NEXUS/Util/Exceptions.pm cp lib/Bio/NEXUS/Tools/NexModifier.pm blib/lib/Bio/NEXUS/Tools/NexModifier.pm cp lib/Bio/NEXUS/Util/Logger.pm blib/lib/Bio/NEXUS/Util/Logger.pm cp lib/Bio/NEXUS/TaxaBlock.pm blib/lib/Bio/NEXUS/TaxaBlock.pm --- pure_all --- --- manifypods --- Manifying blib/man1/nex2text_tree.pl.1 Manifying blib/man1/nexplot.pl.1 Manifying blib/man1/nextool.pl.1 Manifying blib/man3/Bio::NEXUS.3 Manifying blib/man3/Bio::NEXUS::AssumptionsBlock.3 Manifying blib/man3/Bio::NEXUS::Block.3 Manifying blib/man3/Bio::NEXUS::CharactersBlock.3 Manifying blib/man3/Bio::NEXUS::CodonsBlock.3 Manifying blib/man3/Bio::NEXUS::DataBlock.3 Manifying blib/man3/Bio::NEXUS::DistancesBlock.3 Manifying blib/man3/Bio::NEXUS::Functions.3 Manifying blib/man3/Bio::NEXUS::HistoryBlock.3 Manifying blib/man3/Bio::NEXUS::Matrix.3 Manifying blib/man3/Bio::NEXUS::NHXCmd.3 Manifying blib/man3/Bio::NEXUS::Node.3 Manifying blib/man3/Bio::NEXUS::NotesBlock.3 Manifying blib/man3/Bio::NEXUS::SetsBlock.3 Manifying blib/man3/Bio::NEXUS::SpanBlock.3 Manifying blib/man3/Bio::NEXUS::TaxUnit.3 Manifying blib/man3/Bio::NEXUS::TaxUnitSet.3 Manifying blib/man3/Bio::NEXUS::TaxaBlock.3 Manifying blib/man3/Bio::NEXUS::Tools::GraphicsParams.3 Manifying blib/man3/Bio::NEXUS::Tools::NexModifier.3 Manifying blib/man3/Bio::NEXUS::Tools::NexPlotter.3 Manifying blib/man3/Bio::NEXUS::Tree.3 Manifying blib/man3/Bio::NEXUS::TreesBlock.3 Manifying blib/man3/Bio::NEXUS::UnalignedBlock.3 Manifying blib/man3/Bio::NEXUS::UnknownBlock.3 Manifying blib/man3/Bio::NEXUS::Util::Exceptions.3 Manifying blib/man3/Bio::NEXUS::Util::Logger.3 Manifying blib/man3/Bio::NEXUS::WeightSet.3 --- all --- =========================================================================== =================================================== ===> p5-Bio-NEXUS-0.78_1 depends on package: p5-Clone-PP>=1.02 - found ===> p5-Bio-NEXUS-0.78_1 depends on package: perl5>=5.20<5.21 - found =========================================================================== =================================================== ===> Staging for p5-Bio-NEXUS-0.78_1 ===> Generating temporary packing list Manifying blib/man1/nex2text_tree.pl.1 Manifying blib/man1/nexplot.pl.1 Manifying blib/man1/nextool.pl.1 Manifying blib/man3/Bio::NEXUS.3 Manifying blib/man3/Bio::NEXUS::AssumptionsBlock.3 Manifying blib/man3/Bio::NEXUS::Block.3 Manifying blib/man3/Bio::NEXUS::CharactersBlock.3 Manifying blib/man3/Bio::NEXUS::CodonsBlock.3 Manifying blib/man3/Bio::NEXUS::DataBlock.3 Manifying blib/man3/Bio::NEXUS::DistancesBlock.3 Manifying blib/man3/Bio::NEXUS::Functions.3 Manifying blib/man3/Bio::NEXUS::HistoryBlock.3 Manifying blib/man3/Bio::NEXUS::Matrix.3 Manifying blib/man3/Bio::NEXUS::NHXCmd.3 Manifying blib/man3/Bio::NEXUS::Node.3 Manifying blib/man3/Bio::NEXUS::NotesBlock.3 Manifying blib/man3/Bio::NEXUS::SetsBlock.3 Manifying blib/man3/Bio::NEXUS::SpanBlock.3 Manifying blib/man3/Bio::NEXUS::TaxUnit.3 Manifying blib/man3/Bio::NEXUS::TaxUnitSet.3 Manifying blib/man3/Bio::NEXUS::TaxaBlock.3 Manifying blib/man3/Bio::NEXUS::Tools::GraphicsParams.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/TaxaBlock.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/TaxUnit.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/WeightSet.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/SetsBlock.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/Functions.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/Node.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/Matrix.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/UnknownBlock.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/TreesBlock.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/Tree.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/NotesBlock.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/TaxUnitSet.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/CharactersBlock.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/CodonsBlock.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/HistoryBlock.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/Block.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/NHXCmd.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/DataBlock.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/SpanBlock.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/UnalignedBlock.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/DistancesBlock.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/AssumptionsBlock.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/Util/Logger.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/Util/Exceptions.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/Tools/NexModifier.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/Tools/GraphicsParams.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/Bio/NEXUS/Tools/NexPlotter.pm Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man1/nexplot.pl.1 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man1/nextool.pl.1 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man1/nex2text_tree.pl.1 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::UnalignedBlock.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::Tools::GraphicsParams.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::Tools::NexModifier.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::TreesBlock.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::SetsBlock.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::Functions.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::DataBlock.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::SpanBlock.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::Node.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::CodonsBlock.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::HistoryBlock.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::Block.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::TaxUnit.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::Tools::NexPlotter.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::UnknownBlock.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::AssumptionsBlock.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::DistancesBlock.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::Util::Logger.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::NotesBlock.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::Tree.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::WeightSet.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::Util::Exceptions.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::Matrix.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::TaxUnitSet.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::NHXCmd.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::TaxaBlock.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::NEXUS::CharactersBlock.3 Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/bin/nexplot.pl Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/bin/nextool.pl Installing /wrkdirs/biology/p5-Bio-NEXUS/stage/usr/local/bin/nex2text_tree.pl ====> Compressing man pages (compress-man) =========================================================================== =================================================== ===> Building package for p5-Bio-NEXUS-0.78_1 file sizes/checksums [63]: . done packing files [63]: . done packing directories [0]: . done =========================================================================== => Cleaning up wrkdir ===> Cleaning for p5-Bio-NEXUS-0.78_1 build of biology/p5-Bio-NEXUS ended at Tue Oct 4 14:56:40 PDT 2016 build time: 00:00:13