=> Building science/nifticlib build started at Wed Oct 5 17:03:06 PDT 2016 port directory: /usr/ports/science/nifticlib building for: DragonFly pkgbox64.dragonflybsd.org 4.7-DEVELOPMENT DragonFly v4.7.0.78.g7d868-DEVELOPMENT #7: Mon Aug 1 22:25:32 PDT 2016 root@pkgbox64.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 maintained by: bacon4000@gmail.com ident warning: no id keywords in /build/boomdata/data/.m/bleeding-edge-default/ref/../06//usr/ports/science/nifticlib/Makefile Makefile ident: Poudriere version: 3.1-pre Host OSVERSION: 400700 Jail OSVERSION: 400702 !!! Jail is newer than host. (Jail: 400702, Host: 400700) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- STATUS=1 SAVED_TERM=screen MASTERMNT=/build/boomdata/data/.m/bleeding-edge-default/ref PATH=/usr/local/libexec/poudriere:/sbin:/bin:/usr/sbin:/usr/bin:/usr/pkg/bin:/usr/pkg/sbin:/usr/games:/usr/local/sbin:/usr/local/bin:/usr/pkg/xorg/bin:/usr/X11R6/bin:/root/bin:/sbin:/usr/sbin POUDRIERE_BUILD_TYPE=bulk PKGNAME=nifticlib-2.0.0 OLDPWD=/root/boom PWD=/build/boomdata/data/.m/bleeding-edge-default/ref/.p/pool MASTERNAME=bleeding-edge-default TERM=cons25 USER=root HOME=/root POUDRIERE_VERSION=3.1-pre LOCALBASE=/usr/local PACKAGE_BUILDING=yes ---End Environment--- ---Begin OPTIONS List--- ---End OPTIONS List--- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- MAKE=gmake XDG_DATA_HOME=/wrkdirs/science/nifticlib XDG_CONFIG_HOME=/wrkdirs/science/nifticlib HOME=/wrkdirs/science/nifticlib TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc50 --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/science/nifticlib XDG_CONFIG_HOME=/wrkdirs/science/nifticlib HOME=/wrkdirs/science/nifticlib TMPDIR="/tmp" NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc50 PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS="" LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 444" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- OSREL=4.7 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local PORTDOCS="" PORTEXAMPLES="" LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/nifticlib" EXAMPLESDIR="share/examples/nifticlib" DATADIR="share/nifticlib" WWWDIR="www/nifticlib" ETCDIR="etc/nifticlib" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/nifticlib DOCSDIR=/usr/local/share/doc/nifticlib EXAMPLESDIR=/usr/local/share/examples/nifticlib WWWDIR=/usr/local/www/nifticlib ETCDIR=/usr/local/etc/nifticlib --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs NO_BACKUP=yes USE_PACKAGE_DEPENDS=yes PKG_CREATE_VERBOSE=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORT_DBDIR=/options PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles MAKE_JOBS_NUMBER=5 ---End make.conf--- =================================================== =========================================================================== =================================================== ===> nifticlib-2.0.0 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.8.7_3.txz Installing pkg-1.8.7_3... Extracting pkg-1.8.7_3: .......... done ===> nifticlib-2.0.0 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of nifticlib-2.0.0 =========================================================================== =================================================== =========================================================================== =================================================== ===> Fetching all distfiles required by nifticlib-2.0.0 for building =========================================================================== =================================================== ===> Fetching all distfiles required by nifticlib-2.0.0 for building => SHA256 Checksum OK for nifticlib-2.0.0.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Fetching all distfiles required by nifticlib-2.0.0 for building ===> Extracting for nifticlib-2.0.0 ===> Fetching all distfiles required by nifticlib-2.0.0 for building => SHA256 Checksum OK for nifticlib-2.0.0.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for nifticlib-2.0.0 ===> Applying ports patches for nifticlib-2.0.0 =========================================================================== =================================================== ===> nifticlib-2.0.0 depends on executable: gmake - not found ===> Installing existing package /packages/All/gmake-4.2.1_1.txz Installing gmake-4.2.1_1... `-- Installing indexinfo-0.2.5... `-- Extracting indexinfo-0.2.5: .... done `-- Installing gettext-runtime-0.19.8.1... `-- Extracting gettext-runtime-0.19.8.1: .......... done Extracting gmake-4.2.1_1: .......... done ===> nifticlib-2.0.0 depends on executable: gmake - found ===> Returning to build of nifticlib-2.0.0 =========================================================================== =================================================== =========================================================================== =================================================== ===> Configuring for nifticlib-2.0.0 =========================================================================== =================================================== ===> Building for nifticlib-2.0.0 gmake[2]: Entering directory '/wrkdirs/science/nifticlib/nifticlib-2.0.0' echo "arch is x86_64" arch is x86_64 gmake -C znzlib depend lib gmake[3]: Entering directory '/wrkdirs/science/nifticlib/nifticlib-2.0.0/znzlib' cc -MM -I/usr/include znzlib.c >> depend.mk rm -f -f depend.mk gmake depend.mk gmake[4]: Entering directory '/wrkdirs/science/nifticlib/nifticlib-2.0.0/znzlib' cc -MM -I/usr/include znzlib.c >> depend.mk gmake[4]: 'depend.mk' is up to date. gmake[4]: Leaving directory '/wrkdirs/science/nifticlib/nifticlib-2.0.0/znzlib' cc -c -pipe -O2 -fno-strict-aliasing -Wall -ansi -pedantic -Wall -ansi -pedantic -DHAVE_ZLIB -I/usr/include znzlib.c ar -r libznz.a znzlib.o /usr/libexec/binutils225/elf/ar: creating libznz.a ranlib libznz.a mkdir -p lib gmake[3]: Leaving directory '/wrkdirs/science/nifticlib/nifticlib-2.0.0/znzlib' ----------- znzlib build completed. gmake -C niftilib depend lib gmake[3]: Entering directory '/wrkdirs/science/nifticlib/nifticlib-2.0.0/niftilib' cc -MM -I/usr/include -I../znzlib nifti1_io.c >> depend.mk rm -f -f depend.mk gmake depend.mk gmake[4]: Entering directory '/wrkdirs/science/nifticlib/nifticlib-2.0.0/niftilib' cc -MM -I/usr/include -I../znzlib nifti1_io.c >> depend.mk gmake[4]: 'depend.mk' is up to date. gmake[4]: Leaving directory '/wrkdirs/science/nifticlib/nifticlib-2.0.0/niftilib' cc -c -pipe -O2 -fno-strict-aliasing -Wall -ansi -pedantic -Wall -ansi -pedantic -DHAVE_ZLIB -I/usr/include -I../znzlib nifti1_io.c nifti1_io.c: In function 'nifti_image_from_ascii': nifti1_io.c:6364:24: warning: variable 'slen' set but not used [-Wunused-but-set-variable] int ii , spos, nn , slen ; ^ ar -r libniftiio.a nifti1_io.o /usr/libexec/binutils225/elf/ar: creating libniftiio.a ranlib libniftiio.a mkdir -p lib gmake[3]: Leaving directory '/wrkdirs/science/nifticlib/nifticlib-2.0.0/niftilib' ----------- niftilib build completed. gmake -C nifticdf depend lib gmake[3]: Entering directory '/wrkdirs/science/nifticlib/nifticlib-2.0.0/nifticdf' cc -MM -I../niftilib -I../nifticdf nifticdf.c >> depend.mk rm -f -f depend.mk gmake depend.mk gmake[4]: Entering directory '/wrkdirs/science/nifticlib/nifticlib-2.0.0/nifticdf' cc -MM -I../niftilib -I../nifticdf nifticdf.c >> depend.mk gmake[4]: 'depend.mk' is up to date. gmake[4]: Leaving directory '/wrkdirs/science/nifticlib/nifticlib-2.0.0/nifticdf' cc -c -pipe -O2 -fno-strict-aliasing -Wall -ansi -pedantic -Wall -ansi -pedantic -DHAVE_ZLIB -I../niftilib -I../nifticdf nifticdf.c nifticdf.c: In function 'E0000': nifticdf.c:6145:56: warning: variable 'qok' set but not used [-Wunused-but-set-variable] static unsigned long qbdd,qcond,qdum1,qdum2,qincr,qlim,qok,qup; ^ ar -r libnifticdf.a nifticdf.o /usr/libexec/binutils225/elf/ar: creating libnifticdf.a ranlib libnifticdf.a mkdir -p lib gmake[3]: Leaving directory '/wrkdirs/science/nifticlib/nifticlib-2.0.0/nifticdf' ----------- nifticdf build completed. gmake -C fsliolib depend lib gmake[3]: Entering directory '/wrkdirs/science/nifticlib/nifticlib-2.0.0/fsliolib' cc -MM -I/usr/include -I../znzlib -I../niftilib fslio.c >> depend.mk rm -f -f depend.mk gmake depend.mk gmake[4]: Entering directory '/wrkdirs/science/nifticlib/nifticlib-2.0.0/fsliolib' cc -MM -I/usr/include -I../znzlib -I../niftilib fslio.c >> depend.mk gmake[4]: 'depend.mk' is up to date. gmake[4]: Leaving directory '/wrkdirs/science/nifticlib/nifticlib-2.0.0/fsliolib' cc -c -pipe -O2 -fno-strict-aliasing -Wall -ansi -pedantic -Wall -ansi -pedantic -I/usr/include -I../znzlib -I../niftilib fslio.c fslio.c: In function 'FslCloneHeader': fslio.c:462:22: warning: variable 'iname' set but not used [-Wunused-but-set-variable] char *fname=NULL, *iname=NULL; ^ fslio.c:462:9: warning: variable 'fname' set but not used [-Wunused-but-set-variable] char *fname=NULL, *iname=NULL; ^ fslio.c: In function 'FslWriteVolumes': fslio.c:895:7: warning: variable 'retval' set but not used [-Wunused-but-set-variable] int retval; ^ ar -r libfslio.a fslio.o /usr/libexec/binutils225/elf/ar: creating libfslio.a mkdir -p lib gmake[3]: Leaving directory '/wrkdirs/science/nifticlib/nifticlib-2.0.0/fsliolib' ---------- fsliolib build completed. (cp znzlib/*.a lib; cp znzlib/*.h include;) ranlib lib/*.a znzlib installed. (cp niftilib/*.a lib; cp niftilib/*.h include;) ranlib lib/*.a niftilib installed. (cp nifticdf/*.a lib; cp nifticdf/*.h include;) ranlib lib/*.a niftilib installed. (cp fsliolib/*.a lib; cp fsliolib/*.h include;) ranlib lib/*.a fsliolib installed. gmake -C utils all gmake[3]: Entering directory '/wrkdirs/science/nifticlib/nifticlib-2.0.0/utils' cc -pipe -O2 -fno-strict-aliasing -Wall -ansi -pedantic -o nifti_stats nifti_stats.c -I../include -I/usr/include -L../lib -lnifticdf -L../lib -lniftiio -L/usr/lib -L../lib -lznz -lm -lz cc -pipe -O2 -fno-strict-aliasing -Wall -ansi -pedantic -Wall -o nifti_tool nifti_tool.c -I../include -I/usr/include -L../lib -lniftiio -L/usr/lib -L../lib -lznz -lm -lz cc -pipe -O2 -fno-strict-aliasing -Wall -ansi -pedantic -o nifti1_test nifti1_test.c -I../include -I/usr/include -L../lib -lniftiio -L/usr/lib -L../lib -lznz -lm -lz gmake[3]: Leaving directory '/wrkdirs/science/nifticlib/nifticlib-2.0.0/utils' Utility programs built. (cd utils; cp nifti_stats nifti_tool nifti1_test ../bin;) utils installed. gmake[2]: Leaving directory '/wrkdirs/science/nifticlib/nifticlib-2.0.0' =========================================================================== =================================================== =========================================================================== =================================================== ===> Staging for nifticlib-2.0.0 ===> Generating temporary packing list install -s -m 555 /wrkdirs/science/nifticlib/nifticlib-2.0.0/bin/* /wrkdirs/science/nifticlib/stage/usr/local/bin install -m 0644 /wrkdirs/science/nifticlib/nifticlib-2.0.0/lib/*.a /wrkdirs/science/nifticlib/stage/usr/local/lib install -m 0644 /wrkdirs/science/nifticlib/nifticlib-2.0.0/include/*.h /wrkdirs/science/nifticlib/stage/usr/local/include install -m 444 /usr/ports/science/nifticlib/files/nifticlib.1 /wrkdirs/science/nifticlib/stage/usr/local/man/man1 ====> Compressing man pages (compress-man) =========================================================================== =================================================== ===> Building package for nifticlib-2.0.0 file sizes/checksums [14]: . done packing files [14]: . done packing directories [0]: . done =========================================================================== => Cleaning up wrkdir ===> Cleaning for nifticlib-2.0.0 build of science/nifticlib ended at Wed Oct 5 17:03:29 PDT 2016 build time: 00:00:23