=> Building science/netcdf-cxx build started at Wed Oct 5 11:15:00 PDT 2016 port directory: /usr/ports/science/netcdf-cxx building for: DragonFly pkgbox64.dragonflybsd.org 4.7-DEVELOPMENT DragonFly v4.7.0.78.g7d868-DEVELOPMENT #7: Mon Aug 1 22:25:32 PDT 2016 root@pkgbox64.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 maintained by: sunpoet@FreeBSD.org ident warning: no id keywords in /build/boomdata/data/.m/bleeding-edge-default/ref/../05//usr/ports/science/netcdf-cxx/Makefile Makefile ident: Poudriere version: 3.1-pre Host OSVERSION: 400700 Jail OSVERSION: 400702 !!! Jail is newer than host. (Jail: 400702, Host: 400700) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- STATUS=1 SAVED_TERM=screen MASTERMNT=/build/boomdata/data/.m/bleeding-edge-default/ref PATH=/usr/local/libexec/poudriere:/sbin:/bin:/usr/sbin:/usr/bin:/usr/pkg/bin:/usr/pkg/sbin:/usr/games:/usr/local/sbin:/usr/local/bin:/usr/pkg/xorg/bin:/usr/X11R6/bin:/root/bin:/sbin:/usr/sbin POUDRIERE_BUILD_TYPE=bulk PKGNAME=netcdf-cxx-4.3.0 OLDPWD=/root/boom PWD=/build/boomdata/data/.m/bleeding-edge-default/ref/.p/pool MASTERNAME=bleeding-edge-default TERM=cons25 USER=root HOME=/root POUDRIERE_VERSION=3.1-pre LOCALBASE=/usr/local PACKAGE_BUILDING=yes ---End Environment--- ---Begin OPTIONS List--- ---End OPTIONS List--- --CONFIGURE_ARGS-- --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- CMAKE_PREFIX_PATH="/usr/local" XDG_DATA_HOME=/wrkdirs/science/netcdf-cxx XDG_CONFIG_HOME=/wrkdirs/science/netcdf-cxx HOME=/wrkdirs/science/netcdf-cxx TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc50 CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144 --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/science/netcdf-cxx XDG_CONFIG_HOME=/wrkdirs/science/netcdf-cxx HOME=/wrkdirs/science/netcdf-cxx TMPDIR="/tmp" NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc50 PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" NOPROFILE=1 CC="cc" CFLAGS="-pipe -isystem /usr/local/include -O2 -fno-strict-aliasing" CPP="cpp" CPPFLAGS="-fPIC -DPIC -isystem /usr/local/include" LDFLAGS=" -L/usr/local/lib" LIBS="" CXX="c++" CXXFLAGS=" -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 444" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- OSREL=4.7 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local PORTDOCS="" PORTEXAMPLES="" LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/netcdf-cxx" EXAMPLESDIR="share/examples/netcdf-cxx" DATADIR="share/netcdf-cxx" WWWDIR="www/netcdf-cxx" ETCDIR="etc/netcdf-cxx" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/netcdf-cxx DOCSDIR=/usr/local/share/doc/netcdf-cxx EXAMPLESDIR=/usr/local/share/examples/netcdf-cxx WWWDIR=/usr/local/www/netcdf-cxx ETCDIR=/usr/local/etc/netcdf-cxx --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs NO_BACKUP=yes USE_PACKAGE_DEPENDS=yes PKG_CREATE_VERBOSE=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORT_DBDIR=/options PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles MAKE_JOBS_NUMBER=5 ---End make.conf--- =================================================== =========================================================================== =================================================== ===> netcdf-cxx-4.3.0 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.8.7_3.txz Installing pkg-1.8.7_3... Extracting pkg-1.8.7_3: .......... done ===> netcdf-cxx-4.3.0 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of netcdf-cxx-4.3.0 =========================================================================== =================================================== =========================================================================== =================================================== ===> Fetching all distfiles required by netcdf-cxx-4.3.0 for building =========================================================================== =================================================== ===> Fetching all distfiles required by netcdf-cxx-4.3.0 for building => SHA256 Checksum OK for Unidata-netcdf-cxx4-v4.3.0_GH0.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Fetching all distfiles required by netcdf-cxx-4.3.0 for building ===> Extracting for netcdf-cxx-4.3.0 => SHA256 Checksum OK for Unidata-netcdf-cxx4-v4.3.0_GH0.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for netcdf-cxx-4.3.0 =========================================================================== =================================================== =========================================================================== =================================================== ===> netcdf-cxx-4.3.0 depends on shared library: libnetcdf.so - not found ===> Installing existing package /packages/All/netcdf-4.4.0_2.txz Installing netcdf-4.4.0_2... `-- Installing pkgconf-1.0.1... `-- Extracting pkgconf-1.0.1: .......... done `-- Installing hdf-szip-2.1_2... `-- Extracting hdf-szip-2.1_2: ........ done `-- Installing hdf5-1.10.0... `-- Extracting hdf5-1.10.0: .......... done `-- Installing curl-7.50.3... | `-- Installing libressl-2.4.3... | `-- Extracting libressl-2.4.3: .......... done | `-- Installing ca_root_nss-3.27... | `-- Extracting ca_root_nss-3.27: ....... done | `-- Installing krb5-1.14.4... | | `-- Installing gettext-runtime-0.19.8.1... | | `-- Installing indexinfo-0.2.5... | | `-- Extracting indexinfo-0.2.5: .... done | | `-- Extracting gettext-runtime-0.19.8.1: .......... done | `-- Extracting krb5-1.14.4: .......... done `-- Extracting curl-7.50.3: .......... done `-- Installing ncurses-6.0_5... `-- Extracting ncurses-6.0_5: .......... done Extracting netcdf-4.4.0_2: .......... done Message from ca_root_nss-3.27: ********************************* WARNING ********************************* FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. *********************************** NOTE ********************************** This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem *************************************************************************** Message from ncurses-6.0_5: ===> NOTICE: The ncurses port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> netcdf-cxx-4.3.0 depends on shared library: libnetcdf.so - found (/usr/local/lib/libnetcdf.so) ===> Returning to build of netcdf-cxx-4.3.0 =========================================================================== =================================================== ===> Configuring for netcdf-cxx-4.3.0 configure: loading site script /usr/ports/Templates/config.site configure: netCDF-cxx4 4.3.0 checking build system type... x86_64-portbld-dragonfly4.7 checking host system type... x86_64-portbld-dragonfly4.7 checking target system type... x86_64-portbld-dragonfly4.7 checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... (cached) /bin/mkdir -p checking for gawk... (cached) /usr/bin/awk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no configure: checking user options checking whether netCDF extra tests should be run (developers only)... no checking whether large file (> 2GB) tests should be run... no checking whether benchmaks should be run (experimental)... no checking where to put large temp files if large file tests are run... . checking for doxygen... no configure: WARNING: Doxygen not found - documentation will not be built checking for dot... no configure: WARNING: dot not found - will use simple charts in documentation configure: finding other utilities configure: setting up libtool checking how to print strings... printf checking for style of include used by make... GNU checking for gcc... cc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ISO C89... none needed checking whether cc understands -c and -o together... yes checking dependency style of cc... gcc3 checking for a sed that does not truncate output... (cached) /usr/bin/sed checking for grep that handles long lines and -e... (cached) /usr/bin/grep checking for egrep... (cached) /usr/bin/egrep checking for fgrep... (cached) /usr/bin/fgrep checking for ld used by cc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... (cached) 262144 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... no checking how to convert x86_64-portbld-dragonfly4.7 file names to x86_64-portbld-dragonfly4.7 format... func_convert_file_noop checking how to convert x86_64-portbld-dragonfly4.7 file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from cc object... ok checking for sysroot... no checking for mt... mt checking if mt is a manifest tool... no checking how to run the C preprocessor... cpp checking for ANSI C header files... (cached) yes checking for sys/types.h... (cached) yes checking for sys/stat.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for memory.h... (cached) yes checking for strings.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for unistd.h... (cached) yes checking for dlfcn.h... (cached) yes checking for objdir... .libs checking if cc supports -fno-rtti -fno-exceptions... no checking for cc option to produce PIC... -fPIC -DPIC checking if cc PIC flag -fPIC -DPIC works... yes checking if cc static flag -static works... yes checking if cc supports -c -o file.o... yes checking if cc supports -c -o file.o... (cached) yes checking whether the cc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... dragonfly4.7 ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking whether we are using the GNU C++ compiler... yes checking whether c++ accepts -g... yes checking dependency style of c++... gcc3 checking how to run the C++ preprocessor... c++ -E checking for ld used by c++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the c++ linker (/usr/bin/ld) supports shared libraries... yes checking for c++ option to produce PIC... -fPIC -DPIC checking if c++ PIC flag -fPIC -DPIC works... yes checking if c++ static flag -static works... yes checking if c++ supports -c -o file.o... yes checking if c++ supports -c -o file.o... (cached) yes checking whether the c++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... dragonfly4.7 ld.so checking how to hardcode library paths into programs... immediate checking for gawk... (cached) /usr/bin/awk checking for gcc... (cached) cc checking whether we are using the GNU C compiler... (cached) yes checking whether cc accepts -g... (cached) yes checking for cc option to accept ISO C89... (cached) none needed checking whether cc understands -c and -o together... (cached) yes checking dependency style of cc... (cached) gcc3 checking how to run the C preprocessor... cpp checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking for stddef.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for stdbool.h that conforms to C99... (cached) yes checking for _Bool... (cached) yes checking for size_t... (cached) yes checking for ptrdiff_t... (cached) yes checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... (cached) yes checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking netcdf.h usability... yes checking netcdf.h presence... yes checking for netcdf.h... yes checking for library containing nc_create... -lnetcdf checking for nc_def_opaque... yes checking for nccreate... yes checking for nc_set_log_level... no checking for oc_open... yes checking for nc_use_parallel_enabled... no checking netCDF v2 API present... yes checking netCDF-4 present... yes configure: generating header files and makefiles checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating cxx4/Makefile config.status: creating examples/Makefile config.status: creating docs/Makefile config.status: creating ncxx4-config config.status: creating netcdf-cxx4.pc config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands =========================================================================== =================================================== ===> Building for netcdf-cxx-4.3.0 --- all --- /usr/bin/make all-recursive --- all-recursive --- Making all in cxx4 --- ncAtt.lo --- --- ncCheck.lo --- --- ncCompoundType.lo --- --- ncDim.lo --- --- ncEnumType.lo --- --- ncAtt.lo --- depbase=`echo ncAtt.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; /bin/sh ../libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncAtt.lo -MD -MP -MF $depbase.Tpo -c -o ncAtt.lo ncAtt.cpp && mv -f $depbase.Tpo $depbase.Plo --- ncCheck.lo --- depbase=`echo ncCheck.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; /bin/sh ../libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncCheck.lo -MD -MP -MF $depbase.Tpo -c -o ncCheck.lo ncCheck.cpp && mv -f $depbase.Tpo $depbase.Plo --- ncCompoundType.lo --- depbase=`echo ncCompoundType.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; /bin/sh ../libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncCompoundType.lo -MD -MP -MF $depbase.Tpo -c -o ncCompoundType.lo ncCompoundType.cpp && mv -f $depbase.Tpo $depbase.Plo --- ncDim.lo --- depbase=`echo ncDim.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; /bin/sh ../libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncDim.lo -MD -MP -MF $depbase.Tpo -c -o ncDim.lo ncDim.cpp && mv -f $depbase.Tpo $depbase.Plo --- ncEnumType.lo --- depbase=`echo ncEnumType.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; /bin/sh ../libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncEnumType.lo -MD -MP -MF $depbase.Tpo -c -o ncEnumType.lo ncEnumType.cpp && mv -f $depbase.Tpo $depbase.Plo libtool: compile: c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncEnumType.lo -MD -MP -MF .deps/ncEnumType.Tpo -c ncEnumType.cpp -fPIC -DPIC -o .libs/ncEnumType.o --- ncAtt.lo --- libtool: compile: c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncAtt.lo -MD -MP -MF .deps/ncAtt.Tpo -c ncAtt.cpp -fPIC -DPIC -o .libs/ncAtt.o --- ncDim.lo --- libtool: compile: c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncDim.lo -MD -MP -MF .deps/ncDim.Tpo -c ncDim.cpp -fPIC -DPIC -o .libs/ncDim.o --- ncCompoundType.lo --- libtool: compile: c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncCompoundType.lo -MD -MP -MF .deps/ncCompoundType.Tpo -c ncCompoundType.cpp -fPIC -DPIC -o .libs/ncCompoundType.o --- ncCheck.lo --- libtool: compile: c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncCheck.lo -MD -MP -MF .deps/ncCheck.Tpo -c ncCheck.cpp -fPIC -DPIC -o .libs/ncCheck.o --- ncEnumType.lo --- libtool: compile: c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncEnumType.lo -MD -MP -MF .deps/ncEnumType.Tpo -c ncEnumType.cpp -o ncEnumType.o >/dev/null 2>&1 --- ncCheck.lo --- libtool: compile: c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncCheck.lo -MD -MP -MF .deps/ncCheck.Tpo -c ncCheck.cpp -o ncCheck.o >/dev/null 2>&1 --- ncException.lo --- depbase=`echo ncException.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; /bin/sh ../libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncException.lo -MD -MP -MF $depbase.Tpo -c -o ncException.lo ncException.cpp && mv -f $depbase.Tpo $depbase.Plo libtool: compile: c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncException.lo -MD -MP -MF .deps/ncException.Tpo -c ncException.cpp -fPIC -DPIC -o .libs/ncException.o --- ncCompoundType.lo --- libtool: compile: c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncCompoundType.lo -MD -MP -MF .deps/ncCompoundType.Tpo -c ncCompoundType.cpp -o ncCompoundType.o >/dev/null 2>&1 --- ncDim.lo --- libtool: compile: c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncDim.lo -MD -MP -MF .deps/ncDim.Tpo -c ncDim.cpp -o ncDim.o >/dev/null 2>&1 --- ncAtt.lo --- libtool: compile: c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncAtt.lo -MD -MP -MF .deps/ncAtt.Tpo -c ncAtt.cpp -o ncAtt.o >/dev/null 2>&1 --- ncFile.lo --- depbase=`echo ncFile.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; /bin/sh ../libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncFile.lo -MD -MP -MF $depbase.Tpo -c -o ncFile.lo ncFile.cpp && mv -f $depbase.Tpo $depbase.Plo libtool: compile: c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncFile.lo -MD -MP -MF .deps/ncFile.Tpo -c ncFile.cpp -fPIC -DPIC -o .libs/ncFile.o --- ncGroup.lo --- depbase=`echo ncGroup.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; /bin/sh ../libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncGroup.lo -MD -MP -MF $depbase.Tpo -c -o ncGroup.lo ncGroup.cpp && mv -f $depbase.Tpo $depbase.Plo libtool: compile: c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncGroup.lo -MD -MP -MF .deps/ncGroup.Tpo -c ncGroup.cpp -fPIC -DPIC -o .libs/ncGroup.o --- ncGroupAtt.lo --- depbase=`echo ncGroupAtt.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; /bin/sh ../libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncGroupAtt.lo -MD -MP -MF $depbase.Tpo -c -o ncGroupAtt.lo ncGroupAtt.cpp && mv -f $depbase.Tpo $depbase.Plo --- ncOpaqueType.lo --- depbase=`echo ncOpaqueType.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; /bin/sh ../libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncOpaqueType.lo -MD -MP -MF $depbase.Tpo -c -o ncOpaqueType.lo ncOpaqueType.cpp && mv -f $depbase.Tpo $depbase.Plo --- ncGroupAtt.lo --- libtool: compile: c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncGroupAtt.lo -MD -MP -MF .deps/ncGroupAtt.Tpo -c ncGroupAtt.cpp -fPIC -DPIC -o .libs/ncGroupAtt.o --- ncOpaqueType.lo --- libtool: compile: c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncOpaqueType.lo -MD -MP -MF .deps/ncOpaqueType.Tpo -c ncOpaqueType.cpp -fPIC -DPIC -o .libs/ncOpaqueType.o --- ncFile.lo --- libtool: compile: c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncFile.lo -MD -MP -MF .deps/ncFile.Tpo -c ncFile.cpp -o ncFile.o >/dev/null 2>&1 --- ncGroupAtt.lo --- libtool: compile: c++ 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$depbase.Tpo -c -o ncUint64.lo ncUint64.cpp && mv -f $depbase.Tpo $depbase.Plo libtool: compile: c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncUint64.lo -MD -MP -MF .deps/ncUint64.Tpo -c ncUint64.cpp -fPIC -DPIC -o .libs/ncUint64.o --- ncString.lo --- depbase=`echo ncString.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; /bin/sh ../libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncString.lo -MD -MP -MF $depbase.Tpo -c -o ncString.lo ncString.cpp && mv -f $depbase.Tpo $depbase.Plo libtool: compile: c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncString.lo -MD -MP -MF .deps/ncString.Tpo -c ncString.cpp -fPIC -DPIC -o .libs/ncString.o --- ncUint64.lo --- libtool: compile: c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncUint64.lo -MD -MP -MF .deps/ncUint64.Tpo -c ncUint64.cpp -o ncUint64.o >/dev/null 2>&1 --- ncString.lo --- libtool: compile: c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncString.lo -MD -MP -MF .deps/ncString.Tpo -c ncString.cpp -o ncString.o >/dev/null 2>&1 --- ncVar.lo --- libtool: compile: c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncVar.lo -MD -MP -MF .deps/ncVar.Tpo -c ncVar.cpp -o ncVar.o >/dev/null 2>&1 --- ncGroup.lo --- libtool: compile: c++ -DHAVE_CONFIG_H -I. -I.. -fPIC -DPIC -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT ncGroup.lo -MD -MP -MF .deps/ncGroup.Tpo -c ncGroup.cpp -o ncGroup.o >/dev/null 2>&1 --- libnetcdf_c++4.la --- /bin/sh ../libtool --tag=CXX --mode=link c++ -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -version-info 1:3:0 -L/usr/local/lib -o libnetcdf_c++4.la -rpath /usr/local/lib ncAtt.lo ncCheck.lo ncCompoundType.lo ncDim.lo ncEnumType.lo ncException.lo ncFile.lo ncGroup.lo ncGroupAtt.lo ncOpaqueType.lo ncType.lo ncVar.lo ncVarAtt.lo ncVlenType.lo ncByte.lo ncChar.lo ncShort.lo ncInt.lo ncFloat.lo ncDouble.lo ncUbyte.lo ncUshort.lo ncUint.lo ncInt64.lo ncUint64.lo ncString.lo -lnetcdf libtool: link: c++ -fPIC -DPIC -shared -nostdlib /usr/lib/crti.o /usr/lib/gcc50/crtbeginS.o .libs/ncAtt.o .libs/ncCheck.o .libs/ncCompoundType.o .libs/ncDim.o .libs/ncEnumType.o .libs/ncException.o .libs/ncFile.o .libs/ncGroup.o .libs/ncGroupAtt.o .libs/ncOpaqueType.o .libs/ncType.o .libs/ncVar.o .libs/ncVarAtt.o .libs/ncVlenType.o .libs/ncByte.o .libs/ncChar.o .libs/ncShort.o .libs/ncInt.o .libs/ncFloat.o .libs/ncDouble.o .libs/ncUbyte.o .libs/ncUshort.o .libs/ncUint.o .libs/ncInt64.o .libs/ncUint64.o .libs/ncString.o -L/usr/local/lib -lnetcdf -L/usr/lib/gcc50 -lstdc++ -lm -lc -lgcc -lgcc_pic /usr/lib/gcc50/crtendS.o /usr/lib/crtn.o -O2 -Wl,-soname -Wl,libnetcdf_c++4.so.1 -o .libs/libnetcdf_c++4.so.1.0.3 libtool: link: (cd ".libs" && rm -f "libnetcdf_c++4.so.1" && ln -s "libnetcdf_c++4.so.1.0.3" "libnetcdf_c++4.so.1") libtool: link: (cd ".libs" && rm -f "libnetcdf_c++4.so" && ln -s "libnetcdf_c++4.so.1.0.3" "libnetcdf_c++4.so") libtool: link: ar cru .libs/libnetcdf_c++4.a ncAtt.o ncCheck.o ncCompoundType.o ncDim.o ncEnumType.o ncException.o ncFile.o ncGroup.o ncGroupAtt.o ncOpaqueType.o ncType.o ncVar.o ncVarAtt.o ncVlenType.o ncByte.o ncChar.o ncShort.o ncInt.o ncFloat.o ncDouble.o ncUbyte.o ncUshort.o ncUint.o ncInt64.o ncUint64.o ncString.o libtool: link: ranlib .libs/libnetcdf_c++4.a libtool: link: ( cd ".libs" && rm -f "libnetcdf_c++4.la" && ln -s "../libnetcdf_c++4.la" "libnetcdf_c++4.la" ) Making all in examples Making all in docs =========================================================================== =================================================== =========================================================================== =================================================== ===> Staging for netcdf-cxx-4.3.0 ===> Generating temporary packing list Making install in cxx4 /bin/mkdir -p '/wrkdirs/science/netcdf-cxx/stage/usr/local/lib' /bin/sh ../libtool --mode=install /usr/bin/install -c libnetcdf_c++4.la '/wrkdirs/science/netcdf-cxx/stage/usr/local/lib' libtool: install: /usr/bin/install -c .libs/libnetcdf_c++4.so.1.0.3 /wrkdirs/science/netcdf-cxx/stage/usr/local/lib/libnetcdf_c++4.so.1.0.3 libtool: install: (cd /wrkdirs/science/netcdf-cxx/stage/usr/local/lib && { ln -s -f libnetcdf_c++4.so.1.0.3 libnetcdf_c++4.so.1 || { rm -f libnetcdf_c++4.so.1 && ln -s libnetcdf_c++4.so.1.0.3 libnetcdf_c++4.so.1; }; }) libtool: install: (cd /wrkdirs/science/netcdf-cxx/stage/usr/local/lib && { ln -s -f libnetcdf_c++4.so.1.0.3 libnetcdf_c++4.so || { rm -f libnetcdf_c++4.so && ln -s libnetcdf_c++4.so.1.0.3 libnetcdf_c++4.so; }; }) libtool: install: /usr/bin/install -c .libs/libnetcdf_c++4.lai /wrkdirs/science/netcdf-cxx/stage/usr/local/lib/libnetcdf_c++4.la libtool: install: /usr/bin/install -c .libs/libnetcdf_c++4.a /wrkdirs/science/netcdf-cxx/stage/usr/local/lib/libnetcdf_c++4.a libtool: install: chmod 644 /wrkdirs/science/netcdf-cxx/stage/usr/local/lib/libnetcdf_c++4.a libtool: install: ranlib /wrkdirs/science/netcdf-cxx/stage/usr/local/lib/libnetcdf_c++4.a libtool: install: warning: remember to run `libtool --finish /usr/local/lib' /bin/mkdir -p '/wrkdirs/science/netcdf-cxx/stage/usr/local/include' install -m 0644 netcdf ncAtt.h ncCheck.h ncDim.h ncException.h ncGroup.h ncOpaqueType.h ncVar.h ncVlenType.h ncCompoundType.h ncEnumType.h ncFile.h ncGroupAtt.h ncType.h ncVarAtt.h ncByte.h ncChar.h ncShort.h ncInt.h ncFloat.h ncDouble.h ncUbyte.h ncUshort.h ncUint.h ncInt64.h ncUint64.h ncString.h '/wrkdirs/science/netcdf-cxx/stage/usr/local/include' Making install in examples Making install in docs /bin/mkdir -p '/wrkdirs/science/netcdf-cxx/stage/usr/local/bin' install -m 555 ncxx4-config '/wrkdirs/science/netcdf-cxx/stage/usr/local/bin' /bin/mkdir -p '/wrkdirs/science/netcdf-cxx/stage/usr/local/libdata/pkgconfig' install -m 0644 netcdf-cxx4.pc '/wrkdirs/science/netcdf-cxx/stage/usr/local/libdata/pkgconfig' /usr/bin/make install-data-hook +-------------------------------------------------------------+ | Congratulations! You have successfully installed the | | new netCDF-4 C++ Library | | | | CAUTION: | | | | If you have not already run "make check", then we strongly | | recommend you do so. It does not take very long. | | | | Before using netCDF to store important data, test your | | build with "make check". | | | | If any tests fail, please see the netCDF web site: | | http://www.unidata.ucar.edu/software/netcdf/ | | | | NetCDF is developed and maintained at the Unidata Program | | Center. Unidata provides a broad array of data and software | | tools for use in geoscience education and research. | | http://www.unidata.ucar.edu | +-------------------------------------------------------------+ /usr/bin/strip /wrkdirs/science/netcdf-cxx/stage/usr/local/lib/libnetcdf_c++4.so.1 ====> Compressing man pages (compress-man) =========================================================================== =================================================== ===> Building package for netcdf-cxx-4.3.0 file sizes/checksums [33]: . done packing files [33]: . done packing directories [0]: . done =========================================================================== => Cleaning up wrkdir ===> Cleaning for netcdf-cxx-4.3.0 build of science/netcdf-cxx ended at Wed Oct 5 11:15:49 PDT 2016 build time: 00:00:49