=> Building graphics/R-cran-visNetwork build started at Mon Sep 18 15:51:05 PDT 2017 port directory: /usr/ports/graphics/R-cran-visNetwork building for: DragonFly pkgbox64.dragonflybsd.org 4.9-DEVELOPMENT DragonFly v4.9.0.503.g33553-DEVELOPMENT #21: Fri Aug 4 16:51:32 PDT 2017 marino@pkgbox64.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 maintained by: tota@FreeBSD.org ident warning: no id keywords in /build/boomdata/data/.m/Release48-default/ref/../03//usr/ports/graphics/R-cran-visNetwork/Makefile Makefile ident: Poudriere version: 3.1-pre Host OSVERSION: 400908 Jail OSVERSION: 400801 ---Begin Environment--- STATUS=1 SAVED_TERM=screen MASTERMNT=/build/boomdata/data/.m/Release48-default/ref PATH=/usr/local/libexec/poudriere:/sbin:/bin:/usr/sbin:/usr/bin:/usr/pkg/bin:/usr/pkg/sbin:/usr/games:/usr/local/sbin:/usr/local/bin:/usr/pkg/xorg/bin:/usr/X11R6/bin:/root/bin:/sbin:/usr/sbin POUDRIERE_BUILD_TYPE=bulk PKGNAME=R-cran-visNetwork-2.0.1 OLDPWD=/root/boom PWD=/build/boomdata/data/.m/Release48-default/ref/.p/pool MASTERNAME=Release48-default TERM=cons25 USER=root HOME=/root POUDRIERE_VERSION=3.1-pre LOCALBASE=/usr/local PACKAGE_BUILDING=yes ---End Environment--- ---Begin OPTIONS List--- ---End OPTIONS List--- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- XDG_DATA_HOME=/wrkdirs/graphics/R-cran-visNetwork XDG_CONFIG_HOME=/wrkdirs/graphics/R-cran-visNetwork HOME=/wrkdirs/graphics/R-cran-visNetwork TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc50 --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/graphics/R-cran-visNetwork XDG_CONFIG_HOME=/wrkdirs/graphics/R-cran-visNetwork HOME=/wrkdirs/graphics/R-cran-visNetwork TMPDIR="/tmp" NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc50 PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS="" LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- R_MOD_DIR=lib/R/library/visNetwork OSREL=4.8 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local PORTDOCS="" PORTEXAMPLES="" LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/visNetwork" EXAMPLESDIR="share/examples/visNetwork" DATADIR="share/visNetwork" WWWDIR="www/visNetwork" ETCDIR="etc/visNetwork" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/visNetwork DOCSDIR=/usr/local/share/doc/visNetwork EXAMPLESDIR=/usr/local/share/examples/visNetwork WWWDIR=/usr/local/www/visNetwork ETCDIR=/usr/local/etc/visNetwork --End SUB_LIST-- ---Begin make.conf--- NO_BACKUP=yes USE_PACKAGE_DEPENDS=yes PKG_CREATE_VERBOSE=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORT_DBDIR=/options PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles MAKE_JOBS_NUMBER=5 ---End make.conf--- =================================================== ===> License MIT accepted by the user =========================================================================== =================================================== ===> R-cran-visNetwork-2.0.1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.10.1.txz Installing pkg-1.10.1... Extracting pkg-1.10.1: .......... done ===> R-cran-visNetwork-2.0.1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of R-cran-visNetwork-2.0.1 =========================================================================== =================================================== =========================================================================== =================================================== ===> License MIT accepted by the user => visNetwork_2.0.1.tar.gz doesn't seem to exist in /portdistfiles/. => Attempting to fetch https://cloud.r-project.org/src/contrib/visNetwork_2.0.1.tar.gz visNetwork_2.0.1.tar.gz 2885 kB 0 Bps ===> Fetching all distfiles required by R-cran-visNetwork-2.0.1 for building =========================================================================== =================================================== ===> License MIT accepted by the user ===> Fetching all distfiles required by R-cran-visNetwork-2.0.1 for building => SHA256 Checksum OK for visNetwork_2.0.1.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> License MIT accepted by the user ===> Fetching all distfiles required by R-cran-visNetwork-2.0.1 for building ===> Extracting for R-cran-visNetwork-2.0.1 => SHA256 Checksum OK for visNetwork_2.0.1.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for R-cran-visNetwork-2.0.1 =========================================================================== =================================================== ===> R-cran-visNetwork-2.0.1 depends on package: R-cran-htmlwidgets>0 - not found ===> Installing existing package /packages/All/R-cran-htmlwidgets-0.9.txz Installing R-cran-htmlwidgets-0.9... `-- Installing R-3.4.1_4... | `-- Installing cairo-1.14.8_1,2... | | `-- Installing dri2proto-2.8... | | `-- Extracting dri2proto-2.8: .... done | | `-- Installing fontconfig-2.12.1,1... | | `-- Installing expat-2.2.1... | | `-- Extracting expat-2.2.1: .......... done | | `-- Installing freetype2-2.8... | | `-- Extracting freetype2-2.8: .......... done | | `-- Extracting fontconfig-2.12.1,1: .......... done Running fc-cache to build fontconfig cache... /usr/local/share/fonts: skipping, no such directory /usr/local/lib/X11/fonts: skipping, no such directory /var/db/fontconfig: cleaning cache directory fc-cache: succeeded | | `-- Installing gettext-runtime-0.19.8.1_1... | | `-- Installing indexinfo-0.2.6... | | `-- Extracting indexinfo-0.2.6: .... done | | `-- Extracting gettext-runtime-0.19.8.1_1: .......... done | | `-- Installing glib-2.50.2_4,1... | | `-- Installing 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| | `-- Extracting binutils-2.28,1: .......... done | | `-- Installing gmp-6.1.2... | | `-- Extracting gmp-6.1.2: .......... done | | `-- Installing mpc-1.0.3... | | `-- Installing mpfr-3.1.5_1... | | `-- Extracting mpfr-3.1.5_1: .......... done | | `-- Extracting mpc-1.0.3: ...... done | `-- Extracting gcc5-5.4.0_3: .......... done | `-- Installing gcc6-6.4.0... | `-- Extracting gcc6-6.4.0: .......... done | `-- Installing ghostscript9-agpl-base-9.16_5... | | `-- Installing cups-2.2.3... | | `-- Installing avahi-app-0.6.31_5... | | | `-- Installing dbus-glib-0.108... | | | `-- Installing dbus-1.10.16_1... | | | | `-- Installing libICE-1.0.9_1,1... | | | | `-- Extracting libICE-1.0.9_1,1: .......... done | | | | `-- Installing libSM-1.2.2_3,1... | | | | `-- Extracting libSM-1.2.2_3,1: .......... done ===> Creating groups. Creating group 'messagebus' with gid '556'. ===> Creating users Creating user 'messagebus' with uid '556'. | | | `-- Extracting dbus-1.10.16_1: ......... done | | | `-- Extracting dbus-glib-0.108: .......... done | | | `-- Installing gdbm-1.13_1... | | | `-- Extracting gdbm-1.13_1: .......... done | | | `-- Installing gnome_subr-1.0... | | | `-- Extracting gnome_subr-1.0: . done | | | `-- Installing gobject-introspection-1.50.0,1... | | | `-- Installing python2-2_3... | | | `-- Extracting python2-2_3: ...... done | | | `-- Extracting gobject-introspection-1.50.0,1: .......... done | | | `-- Installing libdaemon-0.14_1... | | | `-- Extracting libdaemon-0.14_1: .......... done ===> Creating groups. Creating group 'avahi' with gid '558'. ===> Creating users Creating user 'avahi' with uid '558'. | | `-- Extracting avahi-app-0.6.31_5: .......... done | | `-- Installing gnutls-3.5.13... | | | `-- Installing libidn2-2.0.3... | | | `-- Installing libunistring-0.9.7... | | | `-- Extracting libunistring-0.9.7: .......... done | | | `-- Extracting libidn2-2.0.3: .......... done | | | `-- Installing libtasn1-4.12... | | | `-- Extracting libtasn1-4.12: .......... done | | | `-- Installing nettle-3.3... | | | `-- Extracting nettle-3.3: .......... done | | | `-- Installing p11-kit-0.23.7... | | | `-- Extracting p11-kit-0.23.7: .......... done | | | `-- Installing trousers-0.3.14_1... | | | `-- Installing tpm-emulator-0.7.4_2... ===> Creating groups. Creating group '_tss' with gid '601'. ===> Creating users Creating user '_tss' with uid '601'. | | | `-- Extracting tpm-emulator-0.7.4_2: ......... done ===> Creating groups. Using existing group '_tss'. ===> Creating users Using existing user '_tss'. | | | `-- Extracting trousers-0.3.14_1: .......... done | | `-- Extracting gnutls-3.5.13: .......... done | | `-- Installing libpaper-1.1.24.4... | | `-- Extracting libpaper-1.1.24.4: .......... done ===> Creating groups. Creating group 'cups' with gid '193'. ===> Creating users Creating user 'cups' with uid '193'. | | `-- Extracting cups-2.2.3: .......... done | | `-- Installing gsfonts-8.11_8... | | `-- Extracting gsfonts-8.11_8: .......... done | | `-- Installing jbig2dec-0.13... | | `-- Extracting jbig2dec-0.13: .......... done | | `-- Installing jpeg-turbo-1.5.2... | | `-- Extracting jpeg-turbo-1.5.2: .......... done | | `-- Installing lcms2-2.8... | | `-- Installing tiff-4.0.8... | | | `-- Installing jbigkit-2.1_1... | | | `-- Extracting jbigkit-2.1_1: .......... done | | `-- Extracting tiff-4.0.8: .......... done | | `-- Extracting lcms2-2.8: .......... done | | `-- Installing libidn-1.33_1... | | `-- Extracting libidn-1.33_1: .......... done | `-- Extracting ghostscript9-agpl-base-9.16_5: .......... done | `-- Installing gmake-4.2.1_1... | `-- Extracting gmake-4.2.1_1: .......... done | `-- Installing icu-58.2_2,1... | `-- Extracting icu-58.2_2,1: .......... done | `-- Installing libXScrnSaver-1.2.2_3... | | `-- Installing scrnsaverproto-1.2.2... | | `-- Extracting scrnsaverproto-1.2.2: ... done | `-- Extracting libXScrnSaver-1.2.2_3: .......... done | `-- Installing libXmu-1.1.2_3,1... | | `-- Installing libXt-1.1.5,1... | | `-- Extracting libXt-1.1.5,1: .......... done | `-- Extracting libXmu-1.1.2_3,1: .......... done | `-- Installing pango-1.40.6... | | `-- Installing encodings-1.0.4_3,1... | | `-- Installing font-util-1.3.1... | | `-- Extracting font-util-1.3.1: .......... done | | `-- Extracting encodings-1.0.4_3,1: .......... done | | `-- Installing harfbuzz-1.4.7... | | `-- Installing graphite2-1.3.10... | | `-- Extracting graphite2-1.3.10: .......... done | | `-- Extracting harfbuzz-1.4.7: .......... done | | `-- Installing libXft-2.3.2_1... | | `-- Extracting libXft-2.3.2_1: ......... done | | `-- Installing xorg-fonts-truetype-7.7_1... | | `-- Installing dejavu-2.37... | | | `-- Installing mkfontdir-1.0.7... | | | `-- Installing mkfontscale-1.1.2... | | | | `-- Installing libfontenc-1.1.3_1... | | | | `-- Extracting libfontenc-1.1.3_1: ......... done | | | `-- Extracting mkfontscale-1.1.2: .. done | | | `-- Extracting mkfontdir-1.0.7: .. done | | `-- Extracting dejavu-2.37: .......... done | | `-- Installing font-bh-ttf-1.0.3_3... | | `-- Extracting font-bh-ttf-1.0.3_3: .......... done | | `-- Installing font-misc-ethiopic-1.0.3_3... | | `-- Extracting font-misc-ethiopic-1.0.3_3: ... done | | `-- Installing font-misc-meltho-1.0.3_3... | | `-- Extracting font-misc-meltho-1.0.3_3: .......... done | `-- Extracting pango-1.40.6: .......... done | `-- Installing tcl86-8.6.6_2... | `-- Extracting tcl86-8.6.6_2: .......... done | `-- Installing tk86-8.6.6... | `-- Extracting tk86-8.6.6: .......... done | `-- Installing wget-1.19.1_1... | `-- Extracting wget-1.19.1_1: .......... done `-- Extracting R-3.4.1_4: .......... done `-- Installing R-cran-htmltools-0.3.6... | `-- Installing R-cran-Rcpp-0.12.12... | `-- Extracting R-cran-Rcpp-0.12.12: .......... done | `-- Installing R-cran-digest-0.6.12... | `-- Extracting R-cran-digest-0.6.12: .......... done `-- Extracting R-cran-htmltools-0.3.6: .......... done `-- Installing R-cran-jsonlite-1.5... `-- Extracting R-cran-jsonlite-1.5: .......... done `-- Installing R-cran-yaml-2.1.14... `-- Extracting R-cran-yaml-2.1.14: .......... done Extracting R-cran-htmlwidgets-0.9: .......... done Message from freetype2-2.8: The 2.7.x series now uses the new subpixel hinting mode (V40 port's option) as the default, emulating a modern version of ClearType. This change inevitably leads to different rendering results, and you might change port's options to adapt it to your taste (or use the new "FREETYPE_PROPERTIES" environment variable). The environment variable "FREETYPE_PROPERTIES" can be used to control the driver properties. Example: FREETYPE_PROPERTIES=truetype:interpreter-version=35 \ cff:no-stem-darkening=1 \ autofitter:warping=1 This allows to select, say, the subpixel hinting mode at runtime for a given application. The controllable properties are listed in the section "Controlling FreeType Modules" in the reference's table of contents (/usr/local/share/doc/freetype2/reference/ft2-toc.html, if documentation was installed). Message from perl5-5.24.2: The /usr/bin/perl symlink has been removed starting with Perl 5.20. For shebangs, you should either use: #!/usr/local/bin/perl or #!/usr/bin/env perl The first one will only work if you have a /usr/local/bin/perl, the second will work as long as perl is in PATH. Message from ncurses-6.0_3: ===> NOTICE: The ncurses port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port Message from python27-2.7.13_7: =========================================================================== Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: bsddb databases/py-bsddb gdbm databases/py-gdbm sqlite3 databases/py-sqlite3 tkinter x11-toolkits/py-tkinter =========================================================================== Message from ca_root_nss-3.32: ********************************* WARNING ********************************* FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. *********************************** NOTE ********************************** This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem *************************************************************************** Message from gcc5-5.4.0_3: To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc5 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. Message from gcc6-6.4.0: To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc6 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. Message from trousers-0.3.14_1: To run tcsd automatically, add the following line to /etc/rc.conf: tcsd_enable="YES" You might want to edit /usr/local/etc/tcsd.conf to reflect your setup. If you want to use tcsd with software TPM emulator, use the following configuration in /etc/rc.conf: tcsd_enable="YES" tcsd_mode="emulator" tpmd_enable="YES" To use TPM, add your_account to '_tss' group like following: # pw groupmod _tss -m your_account Message from ghostscript9-agpl-base-9.16_5: Note: in order to use the script "dvipdf", dvips must be installed. This program is provided by another package print/tex-dvipsk. FAPIfontmap and FAPIcidfmap in /usr/local/share/ghostscript/9.16/Resource/Init have to be configured if you want to use FAPI feature. Message from dejavu-2.37: Make sure that the freetype module is loaded. If it is not, add the following line to the "Modules" section of your X Windows configuration file: Load "freetype" Add the following line to the "Files" section of X Windows configuration file: FontPath "/usr/local/share/fonts/dejavu/" Note: your X Windows configuration file is typically /etc/X11/XF86Config if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org. Message from R-3.4.1_4: ======================================================================== On 11.1 and later, there is a problem downloading R packages when gfortran is chosen as the fortran compiler. Use either of these workarounds until a permanent solution is found. 1. If you are on an amd64 system, you can use flang as the fortran compiler. 2. If you choose gfortran as the fortran compiler, you can add options(download.file.method="wget") to ~/.Rprofile followed by a newline. Details: https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=221127 ======================================================================== ===> R-cran-visNetwork-2.0.1 depends on package: R-cran-htmlwidgets>0 - found ===> Returning to build of R-cran-visNetwork-2.0.1 ===> R-cran-visNetwork-2.0.1 depends on package: R-cran-htmltools>0 - found ===> R-cran-visNetwork-2.0.1 depends on package: R-cran-jsonlite>0 - found ===> R-cran-visNetwork-2.0.1 depends on package: R-cran-magrittr>0 - not found ===> Installing existing package /packages/All/R-cran-magrittr-1.5.txz Installing R-cran-magrittr-1.5... Extracting R-cran-magrittr-1.5: .......... done ===> R-cran-visNetwork-2.0.1 depends on package: R-cran-magrittr>0 - found ===> Returning to build of R-cran-visNetwork-2.0.1 ===> R-cran-visNetwork-2.0.1 depends on file: /usr/local/bin/R - found =========================================================================== =================================================== =========================================================================== =================================================== ===> Configuring for R-cran-visNetwork-2.0.1 =========================================================================== =================================================== =========================================================================== =================================================== ===> R-cran-visNetwork-2.0.1 depends on package: R-cran-htmlwidgets>0 - found ===> R-cran-visNetwork-2.0.1 depends on package: R-cran-htmltools>0 - found ===> R-cran-visNetwork-2.0.1 depends on package: R-cran-jsonlite>0 - found ===> R-cran-visNetwork-2.0.1 depends on package: R-cran-magrittr>0 - found ===> R-cran-visNetwork-2.0.1 depends on file: /usr/local/bin/R - found =========================================================================== =================================================== ===> Staging for R-cran-visNetwork-2.0.1 ===> Generating temporary packing list * installing *source* package 'visNetwork' ... ** package 'visNetwork' successfully unpacked and MD5 sums checked ** R ** inst ** preparing package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (visNetwork) ====> Compressing man pages (compress-man) =========================================================================== =================================================== ===> Building package for R-cran-visNetwork-2.0.1 file sizes/checksums [179]: .. done packing files [179]: .. done packing directories [0]: . done =========================================================================== => Cleaning up wrkdir ===> Cleaning for R-cran-visNetwork-2.0.1 build of graphics/R-cran-visNetwork ended at Mon Sep 18 15:53:44 PDT 2017 build time: 00:02:39