=> Building math/R build started at Sun Mar 12 13:51:38 PDT 2017 port directory: /usr/ports/math/R building for: DragonFly pkgbox64.dragonflybsd.org 4.7-DEVELOPMENT DragonFly v4.7.0.1380.gb4315f-DEVELOPMENT #0: Fri Mar 3 17:20:21 PST 2017 root@pkgbox64.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 maintained by: jrm@FreeBSD.org ident warning: no id keywords in /build/boomdata/data/.m/Release48-default/ref/../09//usr/ports/math/R/Makefile Makefile ident: Poudriere version: 3.1-pre Host OSVERSION: 400713 Jail OSVERSION: 400713 ---Begin Environment--- STATUS=1 SAVED_TERM=screen MASTERMNT=/build/boomdata/data/.m/Release48-default/ref PATH=/usr/local/libexec/poudriere:/sbin:/bin:/usr/sbin:/usr/bin:/usr/pkg/bin:/usr/pkg/sbin:/usr/games:/usr/local/sbin:/usr/local/bin:/usr/pkg/xorg/bin:/usr/X11R6/bin:/root/bin:/sbin:/usr/sbin POUDRIERE_BUILD_TYPE=bulk PKGNAME=R-3.3.2_7 OLDPWD=/root/boom PWD=/build/boomdata/data/.m/Release48-default/ref/.p/pool MASTERNAME=Release48-default TERM=cons25 USER=root HOME=/root POUDRIERE_VERSION=3.1-pre LOCALBASE=/usr/local PACKAGE_BUILDING=yes ---End Environment--- ---Begin OPTIONS List--- ===> The following configuration options are available for R-3.3.2_7: ICU=on: Unicode support via ICU INFO=on: GNU info manuals LDOUBLE=on: Long double data type LETTER=off: US letter paper LIBR=on: Shared R library MEMPROF=off: Memory profiling via Rprofmem() and tracemem() NLS=on: Native Language Support RPROF=on: R profiling via Rprof() X11=on: X11 graphics device ====> Require GCC LTO=off: Use Link Time Optimization OPENMP=off: Parallel processing support via OpenMP ====> Require X11 GHOSTSCRIPT=on: Graphics device for bitmap files via Ghostscript JPEG=on: JPEG graphics device CAIROPANGO=on: Cairo graphics device and Pango multi-language text PNG=on: PNG graphics device TCLTK=on: Tcl/Tk GUI toolkit support TEXDOCS=off: Build/Install TeX-dependent documentation files TIFF=on: TIFF image format support ====> Options available for the single BLAS: you have to select exactly one of them ATLAS=off: ATLAS BLAS implementation OPENBLAS=off: OpenBLAS BLAS implementation NETLIB=off: Netlib BLAS implementation RBLAS=on: Use R-bundled BLAS implementation ===> Use 'make config' to modify these settings ---End OPTIONS List--- --CONFIGURE_ARGS-- --disable-java --with-readline rdocdir=/usr/local/share/doc/R --with-ICU --enable-long-double --enable-R-shlib --disable-memory-profiling --enable-R-profiling --with-x --without-blas --without-lapack --enable-BLAS-shlib --disable-lto --disable-openmp --with-jpeglib --with-cairo --with-libpng --with-tcltk --with-libtiff --x-libraries=/usr/local/lib --x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- r_cv_header_zlib_h=yes r_cv_header_jpeglib_h=yes ac_cv_path_KPSEWHICH="" ac_cv_path_MAKEINDEX="" ac_cv_path_PDFLATEX="" ac_cv_path_PDFTEX="" ac_cv_path_TEX="" ac_cv_path_TEXI2DVI="" F77="gfortran5" FC="gfortran5" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc5" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc5" OBJC="gcc6" OBJCFLAGS=" -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -Wno-import -DLIBICONV_PLUG" ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl PKG_CONFIG=pkgconf XDG_DATA_HOME=/wrkdirs/math/R XDG_CONFIG_HOME=/wrkdirs/math/R HOME=/wrkdirs/math/R TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" CMAKE_PREFIX_PATH="/usr/local" CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144 --End CONFIGURE_ENV-- --MAKE_ENV-- F77="gfortran5" FC="gfortran5" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc5" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc5" OBJC="gcc6" OBJCFLAGS=" -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -Wno-import -DLIBICONV_PLUG" XDG_DATA_HOME=/wrkdirs/math/R XDG_CONFIG_HOME=/wrkdirs/math/R HOME=/wrkdirs/math/R TMPDIR="/tmp" NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" NOPROFILE=1 CC="gcc6" CFLAGS="-pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing" CPP="cpp6" CPPFLAGS="-DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6" LIBS="-L/usr/local/lib" CXX="g++6" CXXFLAGS=" -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 444" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- ICU="" NO_ICU="@comment " INFO="" NO_INFO="@comment " LDOUBLE="" NO_LDOUBLE="@comment " LETTER="@comment " NO_LETTER="" LIBR="" NO_LIBR="@comment " MEMPROF="@comment " NO_MEMPROF="" NLS="" NO_NLS="@comment " RPROF="" NO_RPROF="@comment " X11="" NO_X11="@comment " ATLAS="@comment " NO_ATLAS="" OPENBLAS="@comment " NO_OPENBLAS="" NETLIB="@comment " NO_NETLIB="" RBLAS="" NO_RBLAS="@comment " LTO="@comment " NO_LTO="" OPENMP="@comment " NO_OPENMP="" GHOSTSCRIPT="" NO_GHOSTSCRIPT="@comment " JPEG="" NO_JPEG="@comment " CAIROPANGO="" NO_CAIROPANGO="@comment " PNG="" NO_PNG="@comment " TCLTK="" NO_TCLTK="@comment " TEXDOCS="@comment " NO_TEXDOCS="" TIFF="" NO_TIFF="@comment " GTK2_VERSION="2.10.0" GTK3_VERSION="3.0.0" OSREL=4.7 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local PORTDOCS="" PORTEXAMPLES="" LIB32DIR=lib PERL_VERSION=5.24.1 PERL_VER=5.24 PERL5_MAN1=lib/perl5/site_perl/man/man1 PERL5_MAN3=lib/perl5/site_perl/man/man3 SITE_PERL=lib/perl5/site_perl SITE_ARCH=lib/perl5/site_perl/mach/5.24 PROFILE="@comment " DOCSDIR="share/doc/R" EXAMPLESDIR="share/examples/R" DATADIR="share/R" WWWDIR="www/R" ETCDIR="etc/R" --End PLIST_SUB-- --SUB_LIST-- ICU="" NO_ICU="@comment " INFO="" NO_INFO="@comment " LDOUBLE="" NO_LDOUBLE="@comment " LETTER="@comment " NO_LETTER="" LIBR="" NO_LIBR="@comment " MEMPROF="@comment " NO_MEMPROF="" NLS="" NO_NLS="@comment " RPROF="" NO_RPROF="@comment " X11="" NO_X11="@comment " ATLAS="@comment " NO_ATLAS="" OPENBLAS="@comment " NO_OPENBLAS="" NETLIB="@comment " NO_NETLIB="" RBLAS="" NO_RBLAS="@comment " LTO="@comment " NO_LTO="" OPENMP="@comment " NO_OPENMP="" GHOSTSCRIPT="" NO_GHOSTSCRIPT="@comment " JPEG="" NO_JPEG="@comment " CAIROPANGO="" NO_CAIROPANGO="@comment " PNG="" NO_PNG="@comment " TCLTK="" NO_TCLTK="@comment " TEXDOCS="@comment " NO_TEXDOCS="" TIFF="" NO_TIFF="@comment " PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/R DOCSDIR=/usr/local/share/doc/R EXAMPLESDIR=/usr/local/share/examples/R WWWDIR=/usr/local/www/R ETCDIR=/usr/local/etc/R --End SUB_LIST-- ---Begin make.conf--- NO_BACKUP=yes USE_PACKAGE_DEPENDS=yes PKG_CREATE_VERBOSE=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORT_DBDIR=/options PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles MAKE_JOBS_NUMBER=5 ---End make.conf--- =================================================== ===> License GPLv2 accepted by the user =========================================================================== =================================================== ===> R-3.3.2_7 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.9.4_1.txz Installing pkg-1.9.4_1... Extracting pkg-1.9.4_1: .......... done ===> R-3.3.2_7 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of R-3.3.2_7 =========================================================================== =================================================== =========================================================================== =================================================== ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by R-3.3.2_7 for building =========================================================================== =================================================== ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by R-3.3.2_7 for building => SHA256 Checksum OK for R-3.3.2.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by R-3.3.2_7 for building ===> Extracting for R-3.3.2_7 ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by R-3.3.2_7 for building => SHA256 Checksum OK for R-3.3.2.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for R-3.3.2_7 ===> Applying ports patches for R-3.3.2_7 ===> Applying dragonfly patches for R-3.3.2_7 =========================================================================== =================================================== ===> R-3.3.2_7 depends on executable: texi2any - not found ===> Installing existing package /packages/All/texinfo-6.1.20160425,1.txz Installing texinfo-6.1.20160425,1... `-- Installing indexinfo-0.2.6... `-- Extracting indexinfo-0.2.6: .... done `-- Installing ncurses-6.0_3... `-- Extracting ncurses-6.0_3: .......... done `-- Installing perl5-5.24.1... `-- Extracting perl5-5.24.1: .......... done `-- Installing gettext-runtime-0.19.8.1_1... `-- Extracting gettext-runtime-0.19.8.1_1: .......... done Extracting texinfo-6.1.20160425,1: .......... done Message from ncurses-6.0_3: ===> NOTICE: The ncurses port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port Message from perl5-5.24.1: The /usr/bin/perl symlink has been removed starting with Perl 5.20. For shebangs, you should either use: #!/usr/local/bin/perl or #!/usr/bin/env perl The first one will only work if you have a /usr/local/bin/perl, the second will work as long as perl is in PATH. ===> R-3.3.2_7 depends on executable: texi2any - found ===> Returning to build of R-3.3.2_7 ===> R-3.3.2_7 depends on executable: gfortran5 - not found ===> Installing existing package /packages/All/gcc5-5.4.0.txz Installing gcc5-5.4.0... `-- Installing mpc-1.0.3... | `-- Installing gmp-5.1.3_3... | `-- Extracting gmp-5.1.3_3: .......... done | `-- Installing mpfr-3.1.5_1... | `-- Extracting mpfr-3.1.5_1: .......... done `-- Extracting mpc-1.0.3: ...... done `-- Installing binutils-2.27_5,1... `-- Extracting binutils-2.27_5,1: .......... done Extracting gcc5-5.4.0: .......... done Message from gcc5-5.4.0: To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc5 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===> R-3.3.2_7 depends on executable: gfortran5 - found ===> Returning to build of R-3.3.2_7 ===> R-3.3.2_7 depends on file: /usr/local/bin/clang38 - not found ===> Installing existing package /packages/All/clang38-3.8_1.txz Installing clang38-3.8_1... `-- Installing llvm38-3.8.1_5... | `-- Installing python27-2.7.13_1... | | `-- Installing expat-2.2.0_1... | | `-- Extracting expat-2.2.0_1: .......... done | | `-- Installing readline-6.3.8... | | `-- Extracting readline-6.3.8: .......... done | | `-- Installing libffi-3.2.1... | | `-- Extracting libffi-3.2.1: .......... done | | `-- Installing libressl-2.4.5... | | `-- Extracting libressl-2.4.5: .......... done | `-- Extracting python27-2.7.13_1: .......... done | `-- Installing libedit-3.1.20150325_2,1... | `-- Extracting libedit-3.1.20150325_2,1: .......... done `-- Extracting llvm38-3.8.1_5: .......... done Message from python27-2.7.13_1: =========================================================================== Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: bsddb databases/py-bsddb gdbm databases/py-gdbm sqlite3 databases/py-sqlite3 tkinter x11-toolkits/py-tkinter =========================================================================== ===> R-3.3.2_7 depends on file: /usr/local/bin/clang38 - found ===> Returning to build of R-3.3.2_7 ===> R-3.3.2_7 depends on executable: msgfmt - not found ===> Installing existing package /packages/All/gettext-tools-0.19.8.1.txz Installing gettext-tools-0.19.8.1... Extracting gettext-tools-0.19.8.1: .......... done ===> R-3.3.2_7 depends on executable: msgfmt - found ===> Returning to build of R-3.3.2_7 ===> R-3.3.2_7 depends on package: ghostscript9-agpl-base>=9.16_2 - not found ===> Installing existing package /packages/All/ghostscript9-agpl-base-9.16_5.txz Installing ghostscript9-agpl-base-9.16_5... `-- Installing fontconfig-2.12.1,1... | `-- Installing freetype2-2.6.3... | `-- Extracting freetype2-2.6.3: .......... done `-- Extracting fontconfig-2.12.1,1: .......... done Running fc-cache to build fontconfig cache... /usr/local/share/fonts: skipping, no such directory /usr/local/lib/X11/fonts: skipping, no such directory /var/db/fontconfig: cleaning cache directory fc-cache: succeeded `-- Installing cups-2.2.2_1... | `-- Installing avahi-app-0.6.31_5... | | `-- Installing gnome_subr-1.0... | | `-- Extracting gnome_subr-1.0: . done | | `-- Installing gobject-introspection-1.46.0... | | `-- Installing glib-2.46.2_4... | | | `-- Installing libiconv-1.14_10... | | | `-- Extracting libiconv-1.14_10: .......... done | | | `-- Installing pcre-8.40... | | | `-- Extracting pcre-8.40: .......... done | | `-- Extracting glib-2.46.2_4: .......... done No schema files found: doing nothing. | | `-- Installing python2-2_3... | | `-- Extracting python2-2_3: ...... done | | `-- Extracting gobject-introspection-1.46.0: .......... done | | `-- Installing gdbm-1.12... | | `-- Extracting gdbm-1.12: .......... done | | `-- Installing libdaemon-0.14_1... | | `-- Extracting libdaemon-0.14_1: .......... done | | `-- Installing dbus-glib-0.104... | | `-- Installing dbus-1.10.14_2... | | | `-- Installing libX11-1.6.4,1... | | | `-- Installing xproto-7.0.31... | | | `-- Extracting xproto-7.0.31: .......... done | | | `-- Installing kbproto-1.0.7... | | | `-- Extracting kbproto-1.0.7: .......... done | | | `-- Installing libXdmcp-1.1.2... | | | `-- Extracting libXdmcp-1.1.2: ......... done | | | `-- Installing libxcb-1.12... | | | | `-- Installing libxml2-2.9.4... | | | | `-- Extracting libxml2-2.9.4: .......... done | | | | `-- Installing libpthread-stubs-0.3_6... | | | | `-- Extracting libpthread-stubs-0.3_6: ..... done | | | | `-- Installing libXau-1.0.8_3... | | | | `-- Extracting libXau-1.0.8_3: .......... done | | | `-- Extracting libxcb-1.12: .......... done | | | `-- Extracting libX11-1.6.4,1: .......... done | | | `-- Installing libICE-1.0.9_1,1... | | | `-- Extracting libICE-1.0.9_1,1: .......... done | | | `-- Installing libSM-1.2.2_3,1... | | | `-- Extracting libSM-1.2.2_3,1: .......... done ===> Creating groups. Creating group 'messagebus' with gid '556'. ===> Creating users Creating user 'messagebus' with uid '556'. | | `-- Extracting dbus-1.10.14_2: ......... done | | `-- Extracting dbus-glib-0.104: .......... done ===> Creating groups. Creating group 'avahi' with gid '558'. ===> Creating users Creating user 'avahi' with uid '558'. | `-- Extracting avahi-app-0.6.31_5: .......... done | `-- Installing gnutls-3.5.8... | | `-- Installing nettle-3.3... | | `-- Extracting nettle-3.3: .......... done | | `-- Installing ca_root_nss-3.28.1... | | `-- Extracting ca_root_nss-3.28.1: ........ done | | `-- Installing libtasn1-4.10... | | `-- Extracting libtasn1-4.10: .......... done | | `-- Installing trousers-0.3.14_1... | | `-- Installing tpm-emulator-0.7.4_1... ===> Creating groups. Creating group '_tss' with gid '601'. ===> Creating users Creating user '_tss' with uid '601'. | | `-- Extracting tpm-emulator-0.7.4_1: ......... done ===> Creating groups. Using existing group '_tss'. ===> Creating users Using existing user '_tss'. | | `-- Extracting trousers-0.3.14_1: .......... done | | `-- Installing p11-kit-0.23.3... | | `-- Extracting p11-kit-0.23.3: .......... done | | `-- Installing libunistring-0.9.7... | | `-- Extracting libunistring-0.9.7: .......... done | | `-- Installing libidn-1.33_1... | | `-- Extracting libidn-1.33_1: .......... done | `-- Extracting gnutls-3.5.8: .......... done | `-- Installing libpaper-1.1.24.4... | `-- Extracting libpaper-1.1.24.4: .......... done ===> Creating groups. Creating group 'cups' with gid '193'. ===> Creating users Creating user 'cups' with uid '193'. `-- Extracting cups-2.2.2_1: .......... done `-- Installing jbig2dec-0.13... | `-- Installing png-1.6.27... | `-- Extracting png-1.6.27: .......... done `-- Extracting jbig2dec-0.13: .......... done `-- Installing gsfonts-8.11_8... `-- Extracting gsfonts-8.11_8: .......... done `-- Installing jpeg-turbo-1.5.1... `-- Extracting jpeg-turbo-1.5.1: .......... done `-- Installing lcms2-2.8... | `-- Installing tiff-4.0.7_1... | | `-- Installing jbigkit-2.1_1... | | `-- Extracting jbigkit-2.1_1: .......... done | `-- Extracting tiff-4.0.7_1: .......... done `-- Extracting lcms2-2.8: .......... done Extracting ghostscript9-agpl-base-9.16_5: .......... done Message from ca_root_nss-3.28.1: ********************************* WARNING ********************************* FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. *********************************** NOTE ********************************** This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem *************************************************************************** Message from trousers-0.3.14_1: To run tcsd automatically, add the following line to /etc/rc.conf: tcsd_enable="YES" You might want to edit /usr/local/etc/tcsd.conf to reflect your setup. If you want to use tcsd with software TPM emulator, use the following configuration in /etc/rc.conf: tcsd_enable="YES" tcsd_mode="emulator" tpmd_enable="YES" To use TPM, add your_account to '_tss' group like following: # pw groupmod _tss -m your_account Message from ghostscript9-agpl-base-9.16_5: Note: in order to use the script "dvipdf", dvips must be installed. This program is provided by another package print/tex-dvipsk. FAPIfontmap and FAPIcidfmap in /usr/local/share/ghostscript/9.16/Resource/Init have to be configured if you want to use FAPI feature. ===> R-3.3.2_7 depends on package: ghostscript9-agpl-base>=9.16_2 - found ===> Returning to build of R-3.3.2_7 ===> R-3.3.2_7 depends on package: pkgconf>=0.9.10 - not found ===> Installing existing package /packages/All/pkgconf-1.2.1_1.txz Installing pkgconf-1.2.1_1... Extracting pkgconf-1.2.1_1: .......... done ===> R-3.3.2_7 depends on package: pkgconf>=0.9.10 - found ===> Returning to build of R-3.3.2_7 ===> R-3.3.2_7 depends on executable: gcc6 - not found ===> Installing existing package /packages/All/gcc6-6.3.0.txz Installing gcc6-6.3.0... Extracting gcc6-6.3.0: .......... done Message from gcc6-6.3.0: To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc6 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===> R-3.3.2_7 depends on executable: gcc6 - found ===> Returning to build of R-3.3.2_7 ===> R-3.3.2_7 depends on file: /usr/local/bin/as - found ===> R-3.3.2_7 depends on file: /usr/local/libdata/pkgconfig/ice.pc - found ===> R-3.3.2_7 depends on file: /usr/local/libdata/pkgconfig/sm.pc - found ===> R-3.3.2_7 depends on file: /usr/local/libdata/pkgconfig/x11.pc - found ===> R-3.3.2_7 depends on file: /usr/local/libdata/pkgconfig/xext.pc - not found ===> Installing existing package /packages/All/libXext-1.3.3_1,1.txz Installing libXext-1.3.3_1,1... `-- Installing xextproto-7.3.0... `-- Extracting xextproto-7.3.0: .......... done Extracting libXext-1.3.3_1,1: .......... done ===> R-3.3.2_7 depends on file: /usr/local/libdata/pkgconfig/xext.pc - found ===> Returning to build of R-3.3.2_7 ===> R-3.3.2_7 depends on file: /usr/local/libdata/pkgconfig/xmu.pc - not found ===> Installing existing package /packages/All/libXmu-1.1.2_3,1.txz Installing libXmu-1.1.2_3,1... `-- Installing libXt-1.1.5,1... `-- Extracting libXt-1.1.5,1: .......... done Extracting libXmu-1.1.2_3,1: .......... done ===> R-3.3.2_7 depends on file: /usr/local/libdata/pkgconfig/xmu.pc - found ===> Returning to build of R-3.3.2_7 ===> R-3.3.2_7 depends on file: /usr/local/libdata/pkgconfig/xscrnsaver.pc - not found ===> Installing existing package /packages/All/libXScrnSaver-1.2.2_3.txz Installing libXScrnSaver-1.2.2_3... `-- Installing scrnsaverproto-1.2.2... `-- Extracting scrnsaverproto-1.2.2: ... done Extracting libXScrnSaver-1.2.2_3: .......... done ===> R-3.3.2_7 depends on file: /usr/local/libdata/pkgconfig/xscrnsaver.pc - found ===> Returning to build of R-3.3.2_7 ===> R-3.3.2_7 depends on file: /usr/local/libdata/pkgconfig/xt.pc - found ===> R-3.3.2_7 depends on package: perl5>=5.24<5.25 - found =========================================================================== =================================================== ===> R-3.3.2_7 depends on shared library: libcurl.so - not found ===> Installing existing package /packages/All/curl-7.52.1_1.txz Installing curl-7.52.1_1... `-- Installing krb5-1.14.4_1... `-- Extracting krb5-1.14.4_1: .......... done `-- Installing libnghttp2-1.19.0... `-- Extracting libnghttp2-1.19.0: .......... done Extracting curl-7.52.1_1: .......... done ===> R-3.3.2_7 depends on shared library: libcurl.so - found (/usr/local/lib/libcurl.so) ===> Returning to build of R-3.3.2_7 ===> R-3.3.2_7 depends on shared library: libpcre.so - found (/usr/local/lib/libpcre.so) ===> R-3.3.2_7 depends on shared library: libicui18n.so - not found ===> Installing existing package /packages/All/icu-58.2,1.txz Installing icu-58.2,1... Extracting icu-58.2,1: .......... done ===> R-3.3.2_7 depends on shared library: libicui18n.so - found (/usr/local/lib/libicui18n.so) ===> Returning to build of R-3.3.2_7 ===> R-3.3.2_7 depends on shared library: libpng.so - found (/usr/local/lib/libpng.so) ===> R-3.3.2_7 depends on shared library: libtiff.so - found (/usr/local/lib/libtiff.so) ===> R-3.3.2_7 depends on shared library: libreadline.so.6 - found (/usr/local/lib/libreadline.so.6) ===> R-3.3.2_7 depends on shared library: libintl.so - found (/usr/local/lib/libintl.so) ===> R-3.3.2_7 depends on shared library: libjpeg.so - found (/usr/local/lib/libjpeg.so) ===> R-3.3.2_7 depends on shared library: libtk86.so - not found ===> Installing existing package /packages/All/tk86-8.6.6.txz Installing tk86-8.6.6... `-- Installing libXft-2.3.2_1... | `-- Installing libXrender-0.9.10... | | `-- Installing renderproto-0.11.1... | | `-- Extracting renderproto-0.11.1: .... done | `-- Extracting libXrender-0.9.10: .......... done `-- Extracting libXft-2.3.2_1: ......... done `-- Installing tcl86-8.6.6_2... `-- Extracting tcl86-8.6.6_2: .......... done Extracting tk86-8.6.6: .......... done ===> R-3.3.2_7 depends on shared library: libtk86.so - found (/usr/local/lib/libtk86.so) ===> Returning to build of R-3.3.2_7 ===> R-3.3.2_7 depends on shared library: libtcl86.so - found (/usr/local/lib/libtcl86.so) ===> R-3.3.2_7 depends on shared library: libcairo.so - not found ===> Installing existing package /packages/All/cairo-1.14.6_1,2.txz Installing cairo-1.14.6_1,2... `-- Installing glproto-1.4.17... `-- Extracting glproto-1.4.17: ...... done `-- Installing libEGL-11.2.2... | `-- Installing libdevq-0.0.4... | `-- Extracting libdevq-0.0.4: .......... done | `-- Installing libXdamage-1.1.4_3... | | `-- Installing libXfixes-5.0.3... | | `-- Installing fixesproto-5.0... | | `-- Extracting fixesproto-5.0: .... done | | `-- Extracting libXfixes-5.0.3: .......... done | | `-- Installing damageproto-1.2.1... | | `-- Extracting damageproto-1.2.1: .... done | `-- Extracting libXdamage-1.1.4_3: ...... done | `-- Installing libxshmfence-1.2... | `-- Extracting libxshmfence-1.2: ......... done | `-- Installing gbm-11.2.2... | | `-- Installing libglapi-11.2.2... | | `-- Installing libXvMC-1.0.10... | | | `-- Installing libXv-1.0.11,1... | | | `-- Installing videoproto-2.3.3... | | | `-- Extracting videoproto-2.3.3: ......... done | | | `-- Extracting libXv-1.0.11,1: .......... done | | `-- Extracting libXvMC-1.0.10: .......... done | | `-- Installing libdrm-2.4.74_1,1... | | | `-- Installing libpciaccess-0.13.4... | | | `-- Installing pciids-20170128... | | | `-- Extracting pciids-20170128: ..... done | | | `-- Extracting libpciaccess-0.13.4: ...... done | | `-- Extracting libdrm-2.4.74_1,1: .......... done | | `-- Installing libelf-0.8.13_2... | | `-- Extracting libelf-0.8.13_2: .......... done | | `-- Extracting libglapi-11.2.2: ... done | `-- Extracting gbm-11.2.2: ..... done | `-- Installing llvm37-3.7.1_4... | `-- Extracting llvm37-3.7.1_4: .......... done `-- Extracting libEGL-11.2.2: .......... done `-- Installing libGL-11.2.2... | `-- Installing dri2proto-2.8... | `-- Extracting dri2proto-2.8: .... done | `-- Installing libXxf86vm-1.1.4_1... | | `-- Installing xf86vidmodeproto-2.3.1... | | `-- Extracting xf86vidmodeproto-2.3.1: .... done | `-- Extracting libXxf86vm-1.1.4_1: .......... done `-- Extracting libGL-11.2.2: .......... done `-- Installing xcb-util-renderutil-0.3.9_1... | `-- Installing xcb-util-0.4.0_2,1... | `-- Extracting xcb-util-0.4.0_2,1: .......... done `-- Extracting xcb-util-renderutil-0.3.9_1: ...... done `-- Installing pixman-0.34.0... `-- Extracting pixman-0.34.0: .......... done Extracting cairo-1.14.6_1,2: .......... done ===> R-3.3.2_7 depends on shared library: libcairo.so - found (/usr/local/lib/libcairo.so) ===> Returning to build of R-3.3.2_7 ===> R-3.3.2_7 depends on shared library: libglib-2.0.so - found (/usr/local/lib/libglib-2.0.so) ===> R-3.3.2_7 depends on shared library: libpango-1.0.so - not found ===> Installing existing package /packages/All/pango-1.38.0_1.txz Installing pango-1.38.0_1... `-- Installing encodings-1.0.4_3,1... | `-- Installing font-util-1.3.1... | `-- Extracting font-util-1.3.1: .......... done `-- Extracting encodings-1.0.4_3,1: .......... done `-- Installing harfbuzz-1.4.1... | `-- Installing graphite2-1.3.9... | `-- Extracting graphite2-1.3.9: .......... done `-- Extracting harfbuzz-1.4.1: .......... done `-- Installing xorg-fonts-truetype-7.7_1... | `-- Installing font-misc-meltho-1.0.3_3... | | `-- Installing mkfontdir-1.0.7... | | `-- Installing mkfontscale-1.1.2... | | | `-- Installing libfontenc-1.1.3_1... | | | `-- Extracting libfontenc-1.1.3_1: ......... done | | `-- Extracting mkfontscale-1.1.2: .. done | | `-- Extracting mkfontdir-1.0.7: .. done | `-- Extracting font-misc-meltho-1.0.3_3: .......... done | `-- Installing font-bh-ttf-1.0.3_3... | `-- Extracting font-bh-ttf-1.0.3_3: .......... done | `-- Installing font-misc-ethiopic-1.0.3_3... | `-- Extracting font-misc-ethiopic-1.0.3_3: ... done | `-- Installing dejavu-2.37... | `-- Extracting dejavu-2.37: .......... done Extracting pango-1.38.0_1: .......... done Message from dejavu-2.37: Make sure that the freetype module is loaded. If it is not, add the following line to the "Modules" section of your X Windows configuration file: Load "freetype" Add the following line to the "Files" section of X Windows configuration file: FontPath "/usr/local/share/fonts/dejavu/" Note: your X Windows configuration file is typically /etc/X11/XF86Config if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org. ===> R-3.3.2_7 depends on shared library: libpango-1.0.so - found (/usr/local/lib/libpango-1.0.so) ===> Returning to build of R-3.3.2_7 =========================================================================== =================================================== ===> Configuring for R-3.3.2_7 configure: loading site script /usr/ports/Templates/config.site checking build system type... x86_64-portbld-dragonfly4.7 checking host system type... x86_64-portbld-dragonfly4.7 loading site script './config.site' loading build-specific script './config.site' checking for pwd... /bin/pwd checking whether builddir is srcdir... yes checking for working aclocal... missing checking for working autoconf... missing checking for working automake... missing checking for working autoheader... missing checking whether ln -s works... yes checking for bison... no checking for byacc... byacc checking for /usr/local/bin/ar... /usr/local/bin/ar checking for a BSD-compatible install... /usr/bin/install -c checking for sed... 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Installation directory: /usr/local C compiler: gcc6 -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing Fortran 77 compiler: gfortran5 -O -Wl,-rpath=/usr/local/lib/gcc5 C++ compiler: g++6 -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include C++11 compiler: g++6 -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include Fortran 90/95 compiler: gfortran5 -Wl,-rpath=/usr/local/lib/gcc5 Obj-C compiler: gcc6 -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -Wno-import -DLIBICONV_PLUG -fobjc-exceptions Interfaces supported: X11, tcltk External libraries: readline, curl Additional capabilities: PNG, JPEG, TIFF, NLS, cairo, ICU Options enabled: shared R library, shared BLAS, R profiling Capabilities skipped: Options not enabled: memory profiling Recommended packages: yes configure: WARNING: you cannot build PDF versions of the R manuals configure: WARNING: you cannot build PDF versions of vignettes and help pages configure: WARNING: I could not determine a browser configure: WARNING: I could not determine a PDF viewer =========================================================================== =================================================== ===> Building for R-3.3.2_7 --- svnonly --- --- R --- --- svnonly --- --- R --- --- svnonly --- --- index.html --- --- R --- --- R --- --- R --- --- R --- --- R.fe --- creating src/scripts/R.fe --- R --- --- install-cmds --- mkdir ../../bin --- stamp-R --- --- Rversion.h --- --- Rmath.h --- --- Rconfig.h --- --- stamp-R --- mkdir ../../include --- R.ts --- --- S.ts --- --- Rdefines.ts --- --- Rembedded.ts --- --- Rinternals.ts --- --- Rinterface.ts --- --- Rconfig.tsa --- --- Rmath.tsa --- --- Rversion.tsa --- --- R --- --- stamp-R --- mkdir ../../../include/R_ext --- Applic.ts --- --- Arith.ts --- --- BLAS.ts --- --- Boolean.ts --- --- Callbacks.ts --- --- Complex.ts --- --- Connections.ts --- --- Constants.ts --- --- Error.ts --- --- GetX11Image.ts --- --- GraphicsDevice.ts --- --- GraphicsEngine.ts --- --- Itermacros.ts --- --- Lapack.ts --- --- Linpack.ts --- --- MathThreads.ts --- --- Memory.ts --- --- QuartzDevice.ts --- --- Parse.ts --- --- Print.ts --- --- PrtUtil.ts --- --- R-ftp-http.ts --- --- RS.ts --- --- Rallocators.ts --- --- Random.ts --- --- Rdynload.ts --- --- Riconv.ts --- --- RStartup.ts --- --- Utils.ts --- --- eventloop.ts --- --- libextern.ts --- --- stats_package.ts --- --- stats_stubs.ts --- --- Visibility.ts --- --- make.blas --- --- make.tre --- --- make.blas --- --- R --- --- make.tre --- --- R --- --- make.blas --- --- blas.o --- --- cmplxblas.o --- --- blas.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c blas.f -o blas.o --- cmplxblas.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c cmplxblas.f -o cmplxblas.o --- make.tre --- --- regcomp.d --- --- regerror.d --- --- regexec.d --- --- regcomp.d --- making regcomp.d from regcomp.c --- regerror.d --- making regerror.d from regerror.c --- regexec.d --- making regexec.d from regexec.c --- tre-ast.d --- making tre-ast.d from tre-ast.c --- tre-compile.d --- making tre-compile.d from tre-compile.c --- tre-match-approx.d --- making tre-match-approx.d from tre-match-approx.c --- tre-match-backtrack.d --- making tre-match-backtrack.d from tre-match-backtrack.c --- tre-match-parallel.d --- making tre-match-parallel.d from tre-match-parallel.c --- tre-mem.d --- making tre-mem.d from tre-mem.c --- tre-parse.d --- making tre-parse.d from tre-parse.c --- tre-stack.d --- making tre-stack.d from tre-stack.c --- xmalloc.d --- making xmalloc.d from xmalloc.c --- Makedeps --- --- regcomp.o --- --- regerror.o --- --- regexec.o --- --- regcomp.o --- gcc6 -I. -I. -I../../../src/include -I../../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -fvisibility=hidden -c regcomp.c -o regcomp.o --- regerror.o --- gcc6 -I. -I. -I../../../src/include -I../../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -fvisibility=hidden -c regerror.c -o regerror.o --- regexec.o --- gcc6 -I. -I. -I../../../src/include -I../../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -fvisibility=hidden -c regexec.c -o regexec.o --- tre-ast.o --- gcc6 -I. -I. -I../../../src/include -I../../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -fvisibility=hidden -c tre-ast.c -o tre-ast.o --- tre-compile.o --- gcc6 -I. -I. -I../../../src/include -I../../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -fvisibility=hidden -c tre-compile.c -o tre-compile.o --- tre-match-approx.o --- gcc6 -I. -I. -I../../../src/include -I../../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -fvisibility=hidden -c tre-match-approx.c -o tre-match-approx.o --- tre-match-backtrack.o --- gcc6 -I. -I. -I../../../src/include -I../../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -fvisibility=hidden -c tre-match-backtrack.c -o tre-match-backtrack.o --- tre-match-parallel.o --- gcc6 -I. -I. -I../../../src/include -I../../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -fvisibility=hidden -c tre-match-parallel.c -o tre-match-parallel.o --- tre-mem.o --- gcc6 -I. -I. -I../../../src/include -I../../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -fvisibility=hidden -c tre-mem.c -o tre-mem.o --- tre-parse.o --- gcc6 -I. -I. -I../../../src/include -I../../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -fvisibility=hidden -c tre-parse.c -o tre-parse.o --- tre-stack.o --- gcc6 -I. -I. -I../../../src/include -I../../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -fvisibility=hidden -c tre-stack.c -o tre-stack.o --- xmalloc.o --- gcc6 -I. -I. -I../../../src/include -I../../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -fvisibility=hidden -c xmalloc.c -o xmalloc.o --- libtre.a --- /usr/local/bin/ar -cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o xmalloc.o /usr/local/bin/ranlib libtre.a --- make.blas --- --- libRblas.so --- gcc6 -shared -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o libRblas.so blas.o cmplxblas.o -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.7/5.4.0 -lgfortran -lm -lquadmath --- Rblas_install --- mkdir /wrkdirs/math/R/R-3.3.2/lib --- integrate.d --- --- interv.d --- --- maxcol.d --- --- optim.d --- --- pretty.d --- --- integrate.d --- making integrate.d from integrate.c --- interv.d --- making interv.d from interv.c --- maxcol.d --- making maxcol.d from maxcol.c --- optim.d --- making optim.d from optim.c --- pretty.d --- making pretty.d from pretty.c --- uncmin.d --- making uncmin.d from uncmin.c --- Makedeps --- --- R --- --- integrate.o --- --- interv.o --- --- maxcol.o --- --- optim.o --- --- pretty.o --- --- integrate.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c integrate.c -o integrate.o --- interv.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c interv.c -o interv.o --- maxcol.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c maxcol.c -o maxcol.o --- optim.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c optim.c -o optim.o --- pretty.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pretty.c -o pretty.o --- uncmin.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c uncmin.c -o uncmin.o --- dchdc.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c dchdc.f -o dchdc.o --- dpbfa.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c dpbfa.f -o dpbfa.o --- dpbsl.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c dpbsl.f -o dpbsl.o --- dpoco.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c dpoco.f -o dpoco.o --- dpodi.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c dpodi.f -o dpodi.o --- dpofa.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c dpofa.f -o dpofa.o --- dposl.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c dposl.f -o dposl.o --- dqrdc.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c dqrdc.f -o dqrdc.o --- dqrdc2.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c dqrdc2.f -o dqrdc2.o --- dqrls.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c dqrls.f -o dqrls.o --- dqrsl.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c dqrsl.f -o dqrsl.o --- dqrutl.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c dqrutl.f -o dqrutl.o --- dsvdc.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c dsvdc.f -o dsvdc.o --- dtrco.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c dtrco.f -o dtrco.o --- dtrsl.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c dtrsl.f -o dtrsl.o --- libappl.a --- /usr/local/bin/ar -cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o /usr/local/bin/ranlib libappl.a --- mlutils.d --- --- d1mach.d --- --- i1mach.d --- --- fmax2.d --- --- fmin2.d --- --- i1mach.d --- making i1mach.d from i1mach.c --- fmax2.d --- making fmax2.d from fmax2.c --- d1mach.d --- making d1mach.d from d1mach.c --- fmin2.d --- making fmin2.d from fmin2.c --- mlutils.d --- making mlutils.d from mlutils.c --- fprec.d --- making fprec.d from fprec.c --- fround.d --- making fround.d from fround.c --- ftrunc.d --- making ftrunc.d from ftrunc.c --- sign.d --- making sign.d from sign.c --- fsign.d --- making fsign.d from fsign.c --- imax2.d --- --- imin2.d --- --- imax2.d --- making imax2.d from imax2.c --- chebyshev.d --- --- imin2.d --- making imin2.d from imin2.c --- chebyshev.d --- making chebyshev.d from chebyshev.c --- log1p.d --- making log1p.d from log1p.c --- expm1.d --- making expm1.d from expm1.c --- lgammacor.d --- making lgammacor.d from lgammacor.c --- gammalims.d --- making gammalims.d from gammalims.c --- stirlerr.d --- --- bd0.d --- making bd0.d from bd0.c --- stirlerr.d --- making stirlerr.d from stirlerr.c --- gamma.d --- making gamma.d from gamma.c --- lgamma.d --- making lgamma.d from lgamma.c --- gamma_cody.d --- making gamma_cody.d from gamma_cody.c --- beta.d --- making beta.d from beta.c --- lbeta.d --- making lbeta.d from lbeta.c --- polygamma.d --- making polygamma.d from polygamma.c --- cospi.d --- making cospi.d from cospi.c --- bessel_i.d --- --- bessel_j.d --- making bessel_j.d from bessel_j.c --- bessel_i.d --- making bessel_i.d from bessel_i.c --- bessel_k.d --- making bessel_k.d from bessel_k.c --- bessel_y.d --- making bessel_y.d from bessel_y.c --- choose.d --- making choose.d from choose.c --- snorm.d --- making snorm.d from snorm.c --- sexp.d --- making sexp.d from sexp.c --- dgamma.d --- making dgamma.d from dgamma.c --- pgamma.d --- making pgamma.d from pgamma.c --- qgamma.d --- making qgamma.d from qgamma.c --- rgamma.d --- making rgamma.d from rgamma.c --- dbeta.d --- making dbeta.d from dbeta.c --- pbeta.d --- making pbeta.d from pbeta.c --- qbeta.d --- making qbeta.d from qbeta.c --- rbeta.d --- making rbeta.d from rbeta.c --- dunif.d --- --- punif.d --- making punif.d from punif.c --- dunif.d --- making dunif.d from dunif.c --- qunif.d --- making qunif.d from qunif.c --- runif.d --- making runif.d from runif.c --- dnorm.d --- making dnorm.d from dnorm.c --- pnorm.d --- making pnorm.d from pnorm.c --- qnorm.d --- --- rnorm.d --- --- dlnorm.d --- --- qnorm.d --- making qnorm.d from qnorm.c --- dlnorm.d --- making dlnorm.d from dlnorm.c --- plnorm.d --- making plnorm.d from plnorm.c --- rnorm.d --- making rnorm.d from rnorm.c --- qlnorm.d --- making qlnorm.d from qlnorm.c --- rlnorm.d --- making rlnorm.d from rlnorm.c --- df.d --- making df.d from df.c --- pf.d --- --- qf.d --- making qf.d from qf.c --- pf.d --- making pf.d from pf.c --- rf.d --- making rf.d from rf.c --- dnf.d --- making dnf.d from dnf.c --- dt.d --- making dt.d from dt.c --- pt.d --- making pt.d from pt.c --- qt.d --- making qt.d from qt.c --- rt.d --- making rt.d from rt.c --- dnt.d --- making dnt.d from dnt.c --- dchisq.d --- --- pchisq.d --- making pchisq.d from pchisq.c --- qchisq.d --- making qchisq.d from qchisq.c --- dchisq.d --- making dchisq.d from dchisq.c --- rchisq.d --- making rchisq.d from rchisq.c --- rnchisq.d --- making rnchisq.d from rnchisq.c --- dbinom.d --- making dbinom.d from dbinom.c --- pbinom.d --- making pbinom.d from pbinom.c --- qbinom.d --- making qbinom.d from qbinom.c --- rbinom.d --- making rbinom.d from rbinom.c --- rmultinom.d --- making rmultinom.d from rmultinom.c --- dcauchy.d --- making dcauchy.d from dcauchy.c --- pcauchy.d --- making pcauchy.d from pcauchy.c --- qcauchy.d --- --- rcauchy.d --- --- qcauchy.d --- making qcauchy.d from qcauchy.c --- rcauchy.d --- making rcauchy.d from rcauchy.c --- dexp.d --- making dexp.d from dexp.c --- pexp.d --- making pexp.d from pexp.c --- qexp.d --- making qexp.d from qexp.c --- rexp.d --- making rexp.d from rexp.c --- dgeom.d --- --- pgeom.d --- making pgeom.d from pgeom.c --- qgeom.d --- making qgeom.d from qgeom.c --- dgeom.d --- making dgeom.d from dgeom.c --- rgeom.d --- making rgeom.d from rgeom.c --- dhyper.d --- making dhyper.d from dhyper.c --- phyper.d --- making phyper.d from phyper.c --- qhyper.d --- making qhyper.d from qhyper.c --- rhyper.d --- making rhyper.d from rhyper.c --- dnbinom.d --- making dnbinom.d from dnbinom.c --- pnbinom.d --- making pnbinom.d from pnbinom.c --- qnbinom.d --- making qnbinom.d from qnbinom.c --- rnbinom.d --- --- dpois.d --- --- rnbinom.d --- making rnbinom.d from rnbinom.c --- dpois.d --- making dpois.d from dpois.c --- ppois.d --- making ppois.d from ppois.c --- qpois.d --- --- rpois.d --- --- dweibull.d --- --- qpois.d --- making qpois.d from qpois.c --- rpois.d --- making rpois.d from rpois.c --- dweibull.d --- making dweibull.d from dweibull.c --- pweibull.d --- making pweibull.d from pweibull.c --- qweibull.d --- making qweibull.d from qweibull.c --- rweibull.d --- making rweibull.d from rweibull.c --- dlogis.d --- making dlogis.d from dlogis.c --- plogis.d --- making plogis.d from plogis.c --- qlogis.d --- making qlogis.d from qlogis.c --- rlogis.d --- making rlogis.d from rlogis.c --- dnchisq.d --- making dnchisq.d from dnchisq.c --- pnchisq.d --- making pnchisq.d from pnchisq.c --- qnchisq.d --- making qnchisq.d from qnchisq.c --- dnbeta.d --- making dnbeta.d from dnbeta.c --- pnbeta.d --- making pnbeta.d from pnbeta.c --- qnbeta.d --- making qnbeta.d from qnbeta.c --- pnf.d --- making pnf.d from pnf.c --- pnt.d --- --- qnf.d --- --- pnt.d --- making pnt.d from pnt.c --- qnf.d --- making qnf.d from qnf.c --- qnt.d --- making qnt.d from qnt.c --- ptukey.d --- making ptukey.d from ptukey.c --- qtukey.d --- making qtukey.d from qtukey.c --- toms708.d --- making toms708.d from toms708.c --- wilcox.d --- --- signrank.d --- --- wilcox.d --- making wilcox.d from wilcox.c --- signrank.d --- making signrank.d from signrank.c --- Makedeps --- --- R --- --- mlutils.o --- --- d1mach.o --- --- i1mach.o --- --- fmax2.o --- --- fmin2.o --- --- mlutils.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c mlutils.c -o mlutils.o --- d1mach.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c d1mach.c -o d1mach.o --- i1mach.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c i1mach.c -o i1mach.o --- fmax2.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c fmax2.c -o fmax2.o --- fmin2.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c fmin2.c -o fmin2.o --- fprec.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c fprec.c -o fprec.o --- fround.o --- --- ftrunc.o --- --- fround.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c fround.c -o fround.o --- ftrunc.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ftrunc.c -o ftrunc.o --- sign.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c sign.c -o sign.o --- fsign.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c fsign.c -o fsign.o --- imax2.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c imax2.c -o imax2.o --- imin2.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c imin2.c -o imin2.o --- chebyshev.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c chebyshev.c -o chebyshev.o --- log1p.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c log1p.c -o log1p.o --- expm1.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c expm1.c -o expm1.o --- lgammacor.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c lgammacor.c -o lgammacor.o --- gammalims.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c gammalims.c -o gammalims.o --- stirlerr.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c stirlerr.c -o stirlerr.o --- bd0.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c bd0.c -o bd0.o --- gamma.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c gamma.c -o gamma.o --- lgamma.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c lgamma.c -o lgamma.o --- gamma_cody.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c gamma_cody.c -o gamma_cody.o --- beta.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c beta.c -o beta.o --- lbeta.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c lbeta.c -o lbeta.o --- polygamma.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c polygamma.c -o polygamma.o --- cospi.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c cospi.c -o cospi.o --- bessel_i.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c bessel_i.c -o bessel_i.o --- bessel_j.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c bessel_j.c -o bessel_j.o --- bessel_k.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c bessel_k.c -o bessel_k.o --- bessel_y.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c bessel_y.c -o bessel_y.o --- choose.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c choose.c -o choose.o --- snorm.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c snorm.c -o snorm.o --- sexp.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c sexp.c -o sexp.o --- dgamma.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dgamma.c -o dgamma.o --- pgamma.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pgamma.c -o pgamma.o --- qgamma.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c qgamma.c -o qgamma.o --- rgamma.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rgamma.c -o rgamma.o --- dbeta.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dbeta.c -o dbeta.o --- pbeta.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pbeta.c -o pbeta.o --- qbeta.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c qbeta.c -o qbeta.o --- rbeta.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rbeta.c -o rbeta.o --- dunif.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dunif.c -o dunif.o --- punif.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c punif.c -o punif.o --- qunif.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c qunif.c -o qunif.o --- runif.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c runif.c -o runif.o --- dnorm.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dnorm.c -o dnorm.o --- pnorm.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pnorm.c -o pnorm.o --- qnorm.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c qnorm.c -o qnorm.o --- rnorm.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rnorm.c -o rnorm.o --- dlnorm.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dlnorm.c -o dlnorm.o --- plnorm.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c plnorm.c -o plnorm.o --- qlnorm.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c qlnorm.c -o qlnorm.o --- rlnorm.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rlnorm.c -o rlnorm.o --- df.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c df.c -o df.o --- pf.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pf.c -o pf.o --- qf.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c qf.c -o qf.o --- rf.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rf.c -o rf.o --- dnf.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dnf.c -o dnf.o --- dt.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dt.c -o dt.o --- pt.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pt.c -o pt.o --- qt.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c qt.c -o qt.o --- rt.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rt.c -o rt.o --- dnt.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dnt.c -o dnt.o --- dchisq.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dchisq.c -o dchisq.o --- pchisq.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pchisq.c -o pchisq.o --- qchisq.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c qchisq.c -o qchisq.o --- rchisq.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rchisq.c -o rchisq.o --- rnchisq.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rnchisq.c -o rnchisq.o --- dbinom.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dbinom.c -o dbinom.o --- pbinom.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pbinom.c -o pbinom.o --- qbinom.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c qbinom.c -o qbinom.o --- rbinom.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rbinom.c -o rbinom.o --- rmultinom.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rmultinom.c -o rmultinom.o --- dcauchy.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dcauchy.c -o dcauchy.o --- pcauchy.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pcauchy.c -o pcauchy.o --- qcauchy.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c qcauchy.c -o qcauchy.o --- rcauchy.o --- --- dexp.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dexp.c -o dexp.o --- pexp.o --- --- rcauchy.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rcauchy.c -o rcauchy.o --- pexp.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pexp.c -o pexp.o --- qexp.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c qexp.c -o qexp.o --- rexp.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rexp.c -o rexp.o --- dgeom.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dgeom.c -o dgeom.o --- pgeom.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pgeom.c -o pgeom.o --- qgeom.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c qgeom.c -o qgeom.o --- rgeom.o --- --- dhyper.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dhyper.c -o dhyper.o --- rgeom.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rgeom.c -o rgeom.o --- phyper.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c phyper.c -o phyper.o --- qhyper.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c qhyper.c -o qhyper.o --- rhyper.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rhyper.c -o rhyper.o --- dnbinom.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dnbinom.c -o dnbinom.o --- pnbinom.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pnbinom.c -o pnbinom.o --- qnbinom.o --- --- rnbinom.o --- --- qnbinom.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c qnbinom.c -o qnbinom.o --- rnbinom.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rnbinom.c -o rnbinom.o --- dpois.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dpois.c -o dpois.o --- ppois.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ppois.c -o ppois.o --- qpois.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c qpois.c -o qpois.o --- rpois.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rpois.c -o rpois.o --- dweibull.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dweibull.c -o dweibull.o --- pweibull.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pweibull.c -o pweibull.o --- qweibull.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c qweibull.c -o qweibull.o --- rweibull.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rweibull.c -o rweibull.o --- dlogis.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dlogis.c -o dlogis.o --- plogis.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c plogis.c -o plogis.o --- qlogis.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c qlogis.c -o qlogis.o --- rlogis.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rlogis.c -o rlogis.o --- dnchisq.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dnchisq.c -o dnchisq.o --- pnchisq.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pnchisq.c -o pnchisq.o --- qnchisq.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c qnchisq.c -o qnchisq.o --- dnbeta.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dnbeta.c -o dnbeta.o --- pnbeta.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pnbeta.c -o pnbeta.o --- qnbeta.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c qnbeta.c -o qnbeta.o --- pnf.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pnf.c -o pnf.o --- pnt.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pnt.c -o pnt.o --- qnf.o --- --- qnt.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c qnt.c -o qnt.o --- qnf.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c qnf.c -o qnf.o --- ptukey.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ptukey.c -o ptukey.o --- qtukey.o --- --- toms708.o --- --- qtukey.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c qtukey.c -o qtukey.o --- toms708.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c toms708.c -o toms708.o --- wilcox.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c wilcox.c -o wilcox.o --- signrank.o --- gcc6 -I. -I../../src/include -I../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c signrank.c -o signrank.o --- libnmath.a --- /usr/local/bin/ar -cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o expm1.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o /usr/local/bin/ranlib libnmath.a --- Rembedded.d --- --- dynload.d --- --- system.d --- --- sys-unix.d --- --- sys-std.d --- --- Rembedded.d --- making Rembedded.d from Rembedded.c --- dynload.d --- making dynload.d from dynload.c --- system.d --- making system.d from system.c --- sys-unix.d --- making sys-unix.d from sys-unix.c --- sys-std.d --- making sys-std.d from sys-std.c --- X11.d --- making X11.d from X11.c --- Makefile --- config.status: creating src/unix/Makefile --- Makedeps --- --- R --- --- Rembedded.o --- --- dynload.o --- --- system.o --- --- sys-unix.o --- --- sys-std.o --- --- Rembedded.o --- gcc6 -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c Rembedded.c -o Rembedded.o --- dynload.o --- gcc6 -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dynload.c -o dynload.o --- system.o --- gcc6 -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c system.c -o system.o --- sys-unix.o --- gcc6 -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c sys-unix.c -o sys-unix.o --- sys-std.o --- gcc6 -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c sys-std.c -o sys-std.o --- X11.o --- gcc6 -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c X11.c -o X11.o --- libunix.a --- /usr/local/bin/ar -cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o /usr/local/bin/ranlib libunix.a --- install-Rscript --- gcc6 -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -DR_HOME='"/wrkdirs/math/R/R-3.3.2"' -o Rscript ./Rscript.c --- CommandLineArgs.d --- --- Rdynload.d --- --- Renviron.d --- --- RNG.d --- --- agrep.d --- --- CommandLineArgs.d --- making CommandLineArgs.d from CommandLineArgs.c --- Rdynload.d --- making Rdynload.d from Rdynload.c --- RNG.d --- making RNG.d from RNG.c --- agrep.d --- making agrep.d from agrep.c --- Renviron.d --- making Renviron.d from Renviron.c --- apply.d --- making apply.d from apply.c --- arithmetic.d --- making arithmetic.d from arithmetic.c --- array.d --- making array.d from array.c --- attrib.d --- making attrib.d from attrib.c --- bind.d --- making bind.d from bind.c --- builtin.d --- making builtin.d from builtin.c --- character.d --- making character.d from character.c --- coerce.d --- making coerce.d from coerce.c --- colors.d --- making colors.d from colors.c --- complex.d --- making complex.d from complex.c --- connections.d --- --- context.d --- --- connections.d --- making connections.d from connections.c --- context.d --- making context.d from context.c --- cum.d --- making cum.d from cum.c --- dcf.d --- making dcf.d from dcf.c --- datetime.d --- making datetime.d from datetime.c --- debug.d --- making debug.d from debug.c --- deparse.d --- making deparse.d from deparse.c --- devices.d --- --- dotcode.d --- --- devices.d --- making devices.d from devices.c --- dotcode.d --- making dotcode.d from dotcode.c --- dounzip.d --- making dounzip.d from dounzip.c --- dstruct.d --- --- duplicate.d --- making duplicate.d from duplicate.c --- dstruct.d --- making dstruct.d from dstruct.c --- edit.d --- --- engine.d --- --- edit.d --- making edit.d from edit.c --- engine.d --- making engine.d from engine.c --- envir.d --- making envir.d from envir.c --- errors.d --- making errors.d from errors.c --- eval.d --- making eval.d from eval.c --- format.d --- making format.d from format.c --- gevents.d --- making gevents.d from gevents.c --- gram.d --- making gram.d from gram.c --- gram-ex.d --- making gram-ex.d from gram-ex.c --- graphics.d --- making graphics.d from graphics.c --- grep.d --- making grep.d from grep.c --- identical.d --- making identical.d from identical.c --- inlined.d --- making inlined.d from inlined.c --- inspect.d --- --- internet.d --- making internet.d from internet.c --- inspect.d --- making inspect.d from inspect.c --- iosupport.d --- making iosupport.d from iosupport.c --- lapack.d --- making lapack.d from lapack.c --- list.d --- making list.d from list.c --- localecharset.d --- making localecharset.d from localecharset.c --- logic.d --- --- main.d --- --- logic.d --- making logic.d from logic.c --- mapply.d --- making mapply.d from mapply.c --- main.d --- making main.d from main.c --- match.d --- making match.d from match.c --- memory.d --- making memory.d from memory.c --- names.d --- making names.d from names.c --- objects.d --- making objects.d from objects.c --- options.d --- making options.d from options.c --- paste.d --- making paste.d from paste.c --- platform.d --- making platform.d from platform.c --- plot.d --- making plot.d from plot.c --- plot3d.d --- making plot3d.d from plot3d.c --- plotmath.d --- making plotmath.d from plotmath.c --- print.d --- making print.d from print.c --- printarray.d --- making printarray.d from printarray.c --- printvector.d --- making printvector.d from printvector.c --- printutils.d --- making printutils.d from printutils.c --- qsort.d --- making qsort.d from qsort.c --- radixsort.d --- making radixsort.d from radixsort.c --- random.d --- --- raw.d --- --- registration.d --- --- relop.d --- --- random.d --- making random.d from random.c --- raw.d --- making raw.d from raw.c --- registration.d --- making registration.d from registration.c --- relop.d --- making relop.d from relop.c --- rlocale.d --- making rlocale.d from rlocale.c --- saveload.d --- making saveload.d from saveload.c --- scan.d --- making scan.d from scan.c --- seq.d --- making seq.d from seq.c --- serialize.d --- making serialize.d from serialize.c --- sort.d --- making sort.d from sort.c --- source.d --- making source.d from source.c --- split.d --- making split.d from split.c --- sprintf.d --- making sprintf.d from sprintf.c --- startup.d --- making startup.d from startup.c --- subassign.d --- making subassign.d from subassign.c --- subscript.d --- making subscript.d from subscript.c --- subset.d --- making subset.d from subset.c --- summary.d --- making summary.d from summary.c --- sysutils.d --- making sysutils.d from sysutils.c --- times.d --- making times.d from times.c --- unique.d --- making unique.d from unique.c --- util.d --- making util.d from util.c --- version.d --- making version.d from version.c --- g_alab_her.d --- making g_alab_her.d from g_alab_her.c --- g_cntrlify.d --- making g_cntrlify.d from g_cntrlify.c --- g_fontdb.d --- making g_fontdb.d from g_fontdb.c --- g_her_glyph.d --- making g_her_glyph.d from g_her_glyph.c --- Rmain.d --- making Rmain.d from Rmain.c --- alloca.d --- making alloca.d from alloca.c --- mkdtemp.d --- making mkdtemp.d from mkdtemp.c --- strdup.d --- --- strncasecmp.d --- --- strdup.d --- making strdup.d from strdup.c --- strncasecmp.d --- making strncasecmp.d from strncasecmp.c --- Makefile --- config.status: creating src/main/Makefile --- Makedeps --- --- R --- --- CommandLineArgs.o --- --- Rdynload.o --- --- Renviron.o --- --- RNG.o --- --- agrep.o --- --- Rdynload.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c Rdynload.c -o Rdynload.o --- Renviron.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c Renviron.c -o Renviron.o --- RNG.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c RNG.c -o RNG.o --- agrep.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c agrep.c -o agrep.o --- CommandLineArgs.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c CommandLineArgs.c -o CommandLineArgs.o --- apply.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c apply.c -o apply.o --- arithmetic.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c arithmetic.c -o arithmetic.o --- array.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c array.c -o array.o --- attrib.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c attrib.c -o attrib.o --- bind.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c bind.c -o bind.o --- builtin.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c builtin.c -o builtin.o --- character.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c character.c -o character.o --- coerce.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c coerce.c -o coerce.o --- colors.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c colors.c -o colors.o --- complex.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c complex.c -o complex.o --- connections.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c connections.c -o connections.o --- context.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c context.c -o context.o --- cum.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c cum.c -o cum.o --- dcf.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dcf.c -o dcf.o --- datetime.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c datetime.c -o datetime.o --- debug.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c debug.c -o debug.o --- deparse.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c deparse.c -o deparse.o --- devices.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c devices.c -o devices.o --- dotcode.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dotcode.c -o dotcode.o --- dounzip.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dounzip.c -o dounzip.o --- dstruct.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dstruct.c -o dstruct.o --- duplicate.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c duplicate.c -o duplicate.o --- edit.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c edit.c -o edit.o --- engine.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c engine.c -o engine.o --- envir.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c envir.c -o envir.o --- errors.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c errors.c -o errors.o --- eval.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c eval.c -o eval.o --- format.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c format.c -o format.o --- gevents.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c gevents.c -o gevents.o --- gram.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c gram.c -o gram.o --- gram-ex.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c gram-ex.c -o gram-ex.o --- graphics.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c graphics.c -o graphics.o --- grep.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c grep.c -o grep.o --- identical.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c identical.c -o identical.o --- inlined.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c inlined.c -o inlined.o --- inspect.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c inspect.c -o inspect.o --- internet.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c internet.c -o internet.o --- iosupport.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c iosupport.c -o iosupport.o --- lapack.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c lapack.c -o lapack.o --- list.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c list.c -o list.o --- localecharset.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c localecharset.c -o localecharset.o --- logic.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c logic.c -o logic.o --- main.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c main.c -o main.o main.c: In function 'dummy_ii': main.c:1656:12: warning: function returns address of local variable [-Wreturn-local-addr] return (uintptr_t) ⅈ ^~~~~~~~~~~~~~~ --- mapply.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c mapply.c -o mapply.o --- match.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c match.c -o match.o --- memory.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c memory.c -o memory.o --- names.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c names.c -o names.o --- objects.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c objects.c -o objects.o --- options.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c options.c -o options.o --- paste.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c paste.c -o paste.o --- platform.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c platform.c -o platform.o --- plot.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c plot.c -o plot.o --- plot3d.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c plot3d.c -o plot3d.o --- plotmath.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c plotmath.c -o plotmath.o --- print.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c print.c -o print.o --- printarray.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c printarray.c -o printarray.o --- printvector.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c printvector.c -o printvector.o --- printutils.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c printutils.c -o printutils.o --- qsort.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c qsort.c -o qsort.o --- radixsort.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c radixsort.c -o radixsort.o --- random.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c random.c -o random.o --- raw.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c raw.c -o raw.o --- registration.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c registration.c -o registration.o --- relop.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c relop.c -o relop.o --- rlocale.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rlocale.c -o rlocale.o --- saveload.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c saveload.c -o saveload.o --- scan.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c scan.c -o scan.o --- seq.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c seq.c -o seq.o --- serialize.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c serialize.c -o serialize.o --- sort.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c sort.c -o sort.o --- source.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c source.c -o source.o --- split.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c split.c -o split.o --- sprintf.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c sprintf.c -o sprintf.o --- startup.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c startup.c -o startup.o --- subassign.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c subassign.c -o subassign.o --- subscript.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c subscript.c -o subscript.o --- subset.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c subset.c -o subset.o --- summary.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c summary.c -o summary.o --- sysutils.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c sysutils.c -o sysutils.o --- times.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c times.c -o times.o --- unique.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c unique.c -o unique.o --- util.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c util.c -o util.o --- version.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c version.c -o version.o --- g_alab_her.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c g_alab_her.c -o g_alab_her.o --- g_cntrlify.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c g_cntrlify.c -o g_cntrlify.o --- g_fontdb.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c g_fontdb.c -o g_fontdb.o --- g_her_glyph.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c g_her_glyph.c -o g_her_glyph.o --- xxxpr.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c xxxpr.f -o xxxpr.o --- libR.so --- gcc6 -shared -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o libR.so CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o names.o objects.o options.o paste.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o radixsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o `ls ../unix/*.o ../appl/*.o ../nmath/*.o` ../extra/tre/libtre.a -L../../lib -lRblas -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.7/5.4.0 -lgfortran -lm -lquadmath /usr/local/lib/libintl.so -Wl,-rpath -Wl,/usr/local/lib -lreadline -L/usr/local/lib -lpcre -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n --- install-lib-local --- --- installdirs --- mkdir /wrkdirs/math/R/R-3.3.2/bin/exec --- install-lib --- --- Rmain.o --- gcc6 -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c Rmain.c -o Rmain.o --- R.bin --- gcc6 -Wl,--export-dynamic -L../../lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o R.bin Rmain.o -lR -lRblas --- install-bin-local --- --- installdirs --- --- install-bin --- --- make.X11 --- --- make.internet --- --- make.lapack --- --- make.X11 --- --- devX11.d --- --- rotated.d --- --- make.internet --- --- Rhttpd.d --- --- Rsock.d --- --- make.X11 --- --- devX11.d --- making devX11.d from devX11.c --- make.lapack --- --- Lapack.d --- --- make.internet --- --- Rhttpd.d --- making Rhttpd.d from Rhttpd.c --- Rsock.d --- making Rsock.d from Rsock.c --- make.lapack --- making Lapack.d from Lapack.c --- make.X11 --- --- rotated.d --- making rotated.d from rotated.c --- make.internet --- --- internet.d --- making internet.d from internet.c --- libcurl.d --- making libcurl.d from libcurl.c --- make.X11 --- --- rbitmap.d --- making rbitmap.d from rbitmap.c --- make.lapack --- --- Makedeps --- --- make.internet --- --- nanoftp.d --- making nanoftp.d from nanoftp.c --- make.lapack --- --- R --- --- make.internet --- --- nanohttp.d --- making nanohttp.d from nanohttp.c --- make.X11 --- --- Makedeps --- --- R --- --- make.lapack --- --- dlamch.o --- --- make.X11 --- --- devX11.o --- --- make.lapack --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -ffloat-store -c dlamch.f -o dlamch.o --- make.X11 --- gcc6 -I/usr/local/include/libpng16 -I/usr/local/include -I. -I../../../src/include -I../../../src/include -I/usr/local/include -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -D_THREAD_SAFE -I../../../src/library/grDevices/src/cairo -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c devX11.c -o devX11.o --- make.internet --- --- sock.d --- --- sockconn.d --- --- sock.d --- making sock.d from sock.c --- sockconn.d --- making sockconn.d from sockconn.c --- make.X11 --- --- rotated.o --- gcc6 -I/usr/local/include/libpng16 -I/usr/local/include -I. -I../../../src/include -I../../../src/include -I/usr/local/include -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -D_THREAD_SAFE -I../../../src/library/grDevices/src/cairo -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rotated.c -o rotated.o --- rbitmap.o --- gcc6 -I/usr/local/include/libpng16 -I/usr/local/include -I. -I../../../src/include -I../../../src/include -I/usr/local/include -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -D_THREAD_SAFE -I../../../src/library/grDevices/src/cairo -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rbitmap.c -o rbitmap.o --- make.internet --- --- Makedeps --- --- R --- --- Rhttpd.o --- gcc6 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -fvisibility=hidden -c Rhttpd.c -o Rhttpd.o --- make.lapack --- --- dlapack.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c dlapack.f -o dlapack.o --- make.X11 --- --- dataentry.o --- gcc6 -I/usr/local/include/libpng16 -I/usr/local/include -I. -I../../../src/include -I../../../src/include -I/usr/local/include -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -D_THREAD_SAFE -I../../../src/library/grDevices/src/cairo -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dataentry.c -o dataentry.o --- make.internet --- --- Rsock.o --- gcc6 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -fvisibility=hidden -c Rsock.c -o Rsock.o --- internet.o --- gcc6 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -fvisibility=hidden -c internet.c -o internet.o --- libcurl.o --- gcc6 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -fvisibility=hidden -c libcurl.c -o libcurl.o --- nanoftp.o --- gcc6 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -fvisibility=hidden -c nanoftp.c -o nanoftp.o --- nanohttp.o --- gcc6 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -fvisibility=hidden -c nanohttp.c -o nanohttp.o --- make.X11 --- --- R_X11.so --- gcc6 -shared -L../../../lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o R_X11.so devX11.o rotated.o rbitmap.o -L/usr/local/lib -ltiff -ljpeg -L/usr/local/lib -lpng16 -lSM -lICE -L/usr/local/lib -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lintl -lpng16 -lz -lcairo -lpthread -lX11 -lXext -L/usr/local/lib -R/usr/local/lib -lX11 -lXt -lXmu -lR -lm --- make.internet --- --- sock.o --- gcc6 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -fvisibility=hidden -c sock.c -o sock.o --- sockconn.o --- gcc6 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -fvisibility=hidden -c sockconn.c -o sockconn.o --- make.X11 --- --- R_de.so --- gcc6 -shared -L../../../lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o R_de.so dataentry.o -lSM -lICE -L/usr/local/lib -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lintl -lpng16 -lz -lcairo -lpthread -lX11 -lXext -L/usr/local/lib -R/usr/local/lib -lX11 -lXt -lXmu -lR -lm --- make.lapack --- --- cmplx.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c cmplx.f -o cmplx.o --- make.X11 --- --- installdirs --- mkdir /wrkdirs/math/R/R-3.3.2/modules --- install --- --- make.internet --- --- internet.so --- gcc6 -shared -L../../../lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o internet.so Rhttpd.o Rsock.o internet.o libcurl.o nanoftp.o nanohttp.o sock.o sockconn.o -L/usr/local/lib -lcurl -lR --- installdirs --- --- install --- --- make.lapack --- --- libRlapack.so --- gcc6 -shared -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o libRlapack.so dlamch.o dlapack.o cmplx.o -L../../../lib -lRblas -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.7/5.4.0 -lgfortran -lm -lquadmath --- Rlapack_install --- --- Lapack.o --- gcc6 -I. -I../../../src/include -I../../../src/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c Lapack.c -o Lapack.o --- lapack.so --- gcc6 -shared -L../../../lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o lapack.so Lapack.o -lR -L../../../lib -lRlapack -L../../../lib -lRblas -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.7/5.4.0 -lgfortran -lm -lquadmath --- installdirs --- --- install --- /wrkdirs/math/R/R-3.3.2/lib/libRlapack.so is unchanged --- R --- mkdir ../../library --- all --- building system startup profile mkdir ../../../library/base mkdir ../../../library/base/R --- all --- building package 'translations' mkdir ../../../library/translations --- mkdesc --- --- all --- building package 'base' --- mkRbase --- --- mkdesc2 --- --- mkdemos2 --- mkdir ../../../library/base/demo --- all --- building package 'tools' mkdir ../../../library/tools --- mkR1 --- --- mkdesc2 --- --- mkR1 --- mkdir ../../../library/tools/R --- mksrc --- --- text.o --- --- init.o --- --- Rmd5.o --- --- md5.o --- --- signals.o --- --- text.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c text.c -o text.o --- init.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c init.c -o init.o --- signals.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c signals.c -o signals.o --- md5.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c md5.c -o md5.o --- Rmd5.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c Rmd5.c -o Rmd5.o --- install.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c install.c -o install.o --- getfmts.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c getfmts.c -o getfmts.o --- http.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c http.c -o http.o --- gramLatex.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c gramLatex.c -o gramLatex.o --- gramRd.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c gramRd.c -o gramRd.o --- text.d --- making text.d from text.c --- init.d --- making init.d from init.c --- Rmd5.d --- making Rmd5.d from Rmd5.c --- md5.d --- making md5.d from md5.c --- signals.d --- making signals.d from signals.c --- install.d --- making install.d from install.c --- getfmts.d --- making getfmts.d from getfmts.c --- http.d --- making http.d from http.c --- gramLatex.d --- making gramLatex.d from gramLatex.c --- gramRd.d --- making gramRd.d from gramRd.c --- Makedeps --- --- tools.so --- gcc6 -shared -L../../../../lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o -L../../../../lib -lR --- all --- --- shlib --- mkdir ../../../../library/tools/libs --- sysdata --- installing 'sysdata.rda' --- all --- building package 'compiler' mkdir ../../../library/compiler --- mkR1 --- --- mkdesc --- --- mkR1 --- mkdir ../../../library/compiler/R --- ../../../library/compiler/R/compiler.rdb --- byte-compiling package 'compiler' --- ../../../library/base/R/base.rdb --- byte-compiling package 'base' --- ../../../library/tools/R/tools.rdb --- byte-compiling package 'tools' --- all --- building package 'utils' mkdir ../../../library/utils mkdir ../../../library/utils/doc --- mkR1 --- --- mkdesc --- --- instdirs --- --- ../../../library/utils/iconvlist --- --- mkR1 --- mkdir ../../../library/utils/R --- instdirs --- mkdir ../../../library/utils/Sweave mkdir ../../../library/utils/misc --- mksrc --- --- init.o --- --- io.o --- --- size.o --- --- sock.o --- --- stubs.o --- --- sock.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c sock.c -o sock.o --- size.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c size.c -o size.o --- stubs.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c stubs.c -o stubs.o --- io.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c io.c -o io.o --- init.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c init.c -o init.o --- utils.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c utils.c -o utils.o --- init.d --- making init.d from init.c --- io.d --- making io.d from io.c --- size.d --- making size.d from size.c --- sock.d --- making sock.d from sock.c --- stubs.d --- making stubs.d from stubs.c --- utils.d --- making utils.d from utils.c --- Makedeps --- --- utils.so --- gcc6 -shared -L../../../../lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o utils.so init.o io.o size.o sock.o stubs.o utils.o -L../../../../lib -lR --- all --- --- shlib --- mkdir ../../../../library/utils/libs --- sysdata --- installing 'sysdata.rda' --- ../../../library/utils/R/utils.rdb --- byte-compiling package 'utils' --- all --- building package 'grDevices' mkdir ../../../library/grDevices --- mkR1 --- --- mkdesc --- --- mkdemos --- --- instdirs --- --- mkR1 --- mkdir ../../../library/grDevices/R --- instdirs --- mkdir ../../../library/grDevices/afm mkdir ../../../library/grDevices/enc mkdir ../../../library/grDevices/icc --- mksrc --- --- axis_scales.o --- --- chull.o --- --- devices.o --- --- init.o --- --- stubs.o --- --- axis_scales.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c axis_scales.c -o axis_scales.o --- chull.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c chull.c -o chull.o --- devices.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c devices.c -o devices.o --- init.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c init.c -o init.o --- stubs.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c stubs.c -o stubs.o --- colors.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c colors.c -o colors.o --- devCairo.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c devCairo.c -o devCairo.o --- devPicTeX.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c devPicTeX.c -o devPicTeX.o --- devPS.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c devPS.c -o devPS.o --- devQuartz.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c devQuartz.c -o devQuartz.o --- axis_scales.d --- making axis_scales.d from axis_scales.c --- chull.d --- making chull.d from chull.c --- devices.d --- making devices.d from devices.c --- init.d --- making init.d from init.c --- stubs.d --- making stubs.d from stubs.c --- colors.d --- making colors.d from colors.c --- devCairo.d --- making devCairo.d from devCairo.c --- devPicTeX.d --- making devPicTeX.d from devPicTeX.c --- devPS.d --- making devPS.d from devPS.c --- devQuartz.d --- making devQuartz.d from devQuartz.c --- Makedeps --- --- grDevices.so --- gcc6 -shared -L../../../../lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o grDevices.so axis_scales.o chull.o devices.o init.o stubs.o colors.o devCairo.o devPicTeX.o devPS.o devQuartz.o -lz -L../../../../lib -lR --- all --- --- cairodevice --- --- shlib --- --- cairodevice --- --- cairoBM.d --- making cairoBM.d from cairoBM.c --- shlib --- mkdir ../../../../library/grDevices/libs --- cairodevice --- --- Makedeps --- --- all --- --- R --- --- cairoBM.o --- gcc6 -I. -I../../../../../src/include -I../../../../../src/include -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -D_THREAD_SAFE -I../../../../../src/modules/X11 -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c cairoBM.c -o cairoBM.o --- cairo.so --- gcc6 -shared -L../../../../../lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o cairo.so cairoBM.o ../../../../../src/modules/X11/rbitmap.o -L/usr/local/lib -ltiff -ljpeg -L/usr/local/lib -lpng16 -L/usr/local/lib -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lintl -lpng16 -lz -lcairo -lpthread -L../../../../../lib -lR -lm --- ../../../library/grDevices/R/grDevices.rdb --- byte-compiling package 'grDevices' --- all --- building package 'graphics' mkdir ../../../library/graphics --- mkR1 --- --- mkdesc --- --- mkdemos --- --- mkfigs --- --- mkR1 --- mkdir ../../../library/graphics/R --- mksrc --- --- init.o --- --- base.o --- --- graphics.o --- --- par.o --- --- plot.o --- --- base.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c base.c -o base.o --- graphics.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c graphics.c -o graphics.o --- init.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c init.c -o init.o --- plot.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c plot.c -o plot.o --- par.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c par.c -o par.o --- plot3d.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c plot3d.c -o plot3d.o --- stem.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c stem.c -o stem.o --- init.d --- making init.d from init.c --- base.d --- making base.d from base.c --- graphics.d --- making graphics.d from graphics.c --- par.d --- making par.d from par.c --- plot.d --- making plot.d from plot.c --- plot3d.d --- making plot3d.d from plot3d.c --- stem.d --- making stem.d from stem.c --- Makedeps --- --- graphics.so --- gcc6 -shared -L../../../../lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o graphics.so init.o base.o graphics.o par.o plot.o plot3d.o stem.o -L../../../../lib -lR --- all --- --- shlib --- mkdir ../../../../library/graphics/libs --- ../../../library/graphics/R/graphics.rdb --- byte-compiling package 'graphics' --- all --- building package 'stats' mkdir ../../../library/stats --- mkR1 --- --- front --- --- mkdesc --- --- mkdemos --- --- mkR1 --- mkdir ../../../library/stats/R --- mksrc --- --- init.o --- --- kmeans.o --- --- ansari.o --- --- bandwidths.o --- --- chisqsim.o --- --- init.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c init.c -o init.o --- kmeans.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c kmeans.c -o kmeans.o --- bandwidths.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c bandwidths.c -o bandwidths.o --- chisqsim.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c chisqsim.c -o chisqsim.o --- ansari.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ansari.c -o ansari.o --- d2x2xk.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c d2x2xk.c -o d2x2xk.o --- fexact.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c fexact.c -o fexact.o --- kendall.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c kendall.c -o kendall.o --- ks.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ks.c -o ks.o --- line.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c line.c -o line.o --- smooth.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c smooth.c -o smooth.o --- prho.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c prho.c -o prho.o --- swilk.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c swilk.c -o swilk.o --- ksmooth.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ksmooth.c -o ksmooth.o --- loessc.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c loessc.c -o loessc.o --- monoSpl.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c monoSpl.c -o monoSpl.o --- isoreg.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c isoreg.c -o isoreg.o --- Srunmed.o --- --- dblcen.o --- --- Srunmed.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c Srunmed.c -o Srunmed.o --- dblcen.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dblcen.c -o dblcen.o --- distance.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c distance.c -o distance.o --- hclust-utils.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c hclust-utils.c -o hclust-utils.o --- nls.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c nls.c -o nls.o --- rWishart.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rWishart.c -o rWishart.o --- HoltWinters.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c HoltWinters.c -o HoltWinters.o --- PPsum.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c PPsum.c -o PPsum.o --- arima.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c arima.c -o arima.o --- burg.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c burg.c -o burg.o --- filter.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c filter.c -o filter.o --- mAR.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c mAR.c -o mAR.o --- pacf.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pacf.c -o pacf.o --- starma.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c starma.c -o starma.o --- port.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c port.c -o port.o --- family.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c family.c -o family.o --- sbart.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c sbart.c -o sbart.o --- approx.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c approx.c -o approx.o --- loglin.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c loglin.c -o loglin.o --- lowess.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c lowess.c -o lowess.o --- massdist.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c massdist.c -o massdist.o --- splines.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c splines.c -o splines.o --- lm.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c lm.c -o lm.o --- complete_cases.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c complete_cases.c -o complete_cases.o --- cov.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c cov.c -o cov.o --- deriv.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c deriv.c -o deriv.o --- fft.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c fft.c -o fft.o --- fourier.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c fourier.c -o fourier.o --- model.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c model.c -o model.o --- optim.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c optim.c -o optim.o --- optimize.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c optimize.c -o optimize.o --- integrate.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c integrate.c -o integrate.o --- random.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c random.c -o random.o --- distn.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c distn.c -o distn.o --- zeroin.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c zeroin.c -o zeroin.o --- rcont.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rcont.c -o rcont.o --- influence.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c influence.c -o influence.o --- init.d --- making init.d from init.c --- kmeans.d --- making kmeans.d from kmeans.c --- ansari.d --- making ansari.d from ansari.c --- bandwidths.d --- --- chisqsim.d --- --- bandwidths.d --- making bandwidths.d from bandwidths.c --- chisqsim.d --- making chisqsim.d from chisqsim.c --- d2x2xk.d --- --- fexact.d --- --- d2x2xk.d --- making d2x2xk.d from d2x2xk.c --- fexact.d --- making fexact.d from fexact.c --- kendall.d --- --- ks.d --- --- kendall.d --- making kendall.d from kendall.c --- ks.d --- making ks.d from ks.c --- line.d --- making line.d from line.c --- smooth.d --- making smooth.d from smooth.c --- prho.d --- --- swilk.d --- --- prho.d --- making prho.d from prho.c --- swilk.d --- making swilk.d from swilk.c --- ksmooth.d --- making ksmooth.d from ksmooth.c --- loessc.d --- making loessc.d from loessc.c --- monoSpl.d --- making monoSpl.d from monoSpl.c --- isoreg.d --- making isoreg.d from isoreg.c --- Srunmed.d --- making Srunmed.d from Srunmed.c --- dblcen.d --- making dblcen.d from dblcen.c --- distance.d --- making distance.d from distance.c --- hclust-utils.d --- making hclust-utils.d from hclust-utils.c --- nls.d --- making nls.d from nls.c --- rWishart.d --- making rWishart.d from rWishart.c --- HoltWinters.d --- making HoltWinters.d from HoltWinters.c --- PPsum.d --- making PPsum.d from PPsum.c --- arima.d --- making arima.d from arima.c --- burg.d --- making burg.d from burg.c --- filter.d --- making filter.d from filter.c --- mAR.d --- making mAR.d from mAR.c --- pacf.d --- making pacf.d from pacf.c --- starma.d --- making starma.d from starma.c --- port.d --- making port.d from port.c --- family.d --- making family.d from family.c --- sbart.d --- making sbart.d from sbart.c --- approx.d --- making approx.d from approx.c --- loglin.d --- making loglin.d from loglin.c --- lowess.d --- making lowess.d from lowess.c --- massdist.d --- making massdist.d from massdist.c --- splines.d --- making splines.d from splines.c --- lm.d --- making lm.d from lm.c --- complete_cases.d --- making complete_cases.d from complete_cases.c --- cov.d --- making cov.d from cov.c --- deriv.d --- making deriv.d from deriv.c --- fft.d --- making fft.d from fft.c --- fourier.d --- making fourier.d from fourier.c --- model.d --- making model.d from model.c --- optim.d --- making optim.d from optim.c --- optimize.d --- making optimize.d from optimize.c --- integrate.d --- making integrate.d from integrate.c --- random.d --- making random.d from random.c --- distn.d --- making distn.d from distn.c --- zeroin.d --- making zeroin.d from zeroin.c --- rcont.d --- making rcont.d from rcont.c --- influence.d --- making influence.d from influence.c --- bsplvd.o --- gfortran5 -fvisibility=hidden -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c bsplvd.f -o bsplvd.o --- bvalue.o --- gfortran5 -fvisibility=hidden -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c bvalue.f -o bvalue.o --- bvalus.o --- gfortran5 -fvisibility=hidden -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c bvalus.f -o bvalus.o --- loessf.o --- --- ppr.o --- --- loessf.o --- gfortran5 -fvisibility=hidden -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c loessf.f -o loessf.o --- ppr.o --- gfortran5 -fvisibility=hidden -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c ppr.f -o ppr.o --- qsbart.o --- gfortran5 -fvisibility=hidden -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c qsbart.f -o qsbart.o --- sgram.o --- gfortran5 -fvisibility=hidden -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c sgram.f -o sgram.o --- sinerp.o --- gfortran5 -fvisibility=hidden -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c sinerp.f -o sinerp.o --- sslvrg.o --- gfortran5 -fvisibility=hidden -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c sslvrg.f -o sslvrg.o --- stxwx.o --- gfortran5 -fvisibility=hidden -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c stxwx.f -o stxwx.o --- hclust.o --- gfortran5 -fvisibility=hidden -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c hclust.f -o hclust.o --- kmns.o --- gfortran5 -fvisibility=hidden -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c kmns.f -o kmns.o --- eureka.o --- gfortran5 -fvisibility=hidden -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c eureka.f -o eureka.o --- stl.o --- gfortran5 -fvisibility=hidden -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c stl.f -o stl.o --- portsrc.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -ffloat-store -c portsrc.f -o portsrc.o --- lminfl.o --- gfortran5 -fvisibility=hidden -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c lminfl.f -o lminfl.o --- Makedeps --- --- stats.so --- gcc6 -shared -L../../../../lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o stats.so init.o kmeans.o ansari.o bandwidths.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o monoSpl.o isoreg.o Srunmed.o dblcen.o distance.o hclust-utils.o nls.o rWishart.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o sbart.o approx.o loglin.o lowess.o massdist.o splines.o lm.o complete_cases.o cov.o deriv.o fft.o fourier.o model.o optim.o optimize.o integrate.o random.o distn.o zeroin.o rcont.o influence.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sgram.o sinerp.o sslvrg.o stxwx.o hclust.o kmns.o eureka.o stl.o portsrc.o lminfl.o -L../../../../lib -lRlapack -L../../../../lib -lRblas -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.7/5.4.0 -lgfortran -lm -lquadmath -L../../../../lib -lR --- all --- --- shlib --- mkdir ../../../../library/stats/libs --- ../../../library/stats/R/stats.rdb --- byte-compiling package 'stats' --- all --- building package 'datasets' mkdir ../../../library/datasets --- mkR --- --- mkdesc --- mkdir ../../../library/datasets/data --- all --- building package 'methods' mkdir ../../../library/methods --- mkR2 --- --- mkdesc --- --- mkR2 --- mkdir ../../../library/methods/R --- mksrc --- --- do_substitute_direct.o --- --- init.o --- --- methods_list_dispatch.o --- --- slot.o --- --- class_support.o --- --- do_substitute_direct.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c do_substitute_direct.c -o do_substitute_direct.o --- init.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c init.c -o init.o --- methods_list_dispatch.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c methods_list_dispatch.c -o methods_list_dispatch.o --- slot.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c slot.c -o slot.o --- class_support.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c class_support.c -o class_support.o --- tests.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c tests.c -o tests.o --- utils.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c utils.c -o utils.o --- do_substitute_direct.d --- making do_substitute_direct.d from do_substitute_direct.c --- init.d --- making init.d from init.c --- methods_list_dispatch.d --- --- slot.d --- --- methods_list_dispatch.d --- making methods_list_dispatch.d from methods_list_dispatch.c --- slot.d --- making slot.d from slot.c --- class_support.d --- making class_support.d from class_support.c --- tests.d --- making tests.d from tests.c --- utils.d --- making utils.d from utils.c --- Makedeps --- --- methods.so --- gcc6 -shared -L../../../../lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o methods.so do_substitute_direct.o init.o methods_list_dispatch.o slot.o class_support.o tests.o utils.o -L../../../../lib -lR --- all --- --- shlib --- mkdir ../../../../library/methods/libs --- ../../../library/methods/R/methods.rdb --- byte-compiling 'methods' initializing class and method definitions ... done --- all --- building package 'grid' mkdir ../../../library/grid mkdir ../../../library/grid/doc --- mkR1 --- --- mkdesc --- --- instdirs --- --- mkR1 --- mkdir ../../../library/grid/R --- mksrc --- --- gpar.o --- --- grid.o --- --- just.o --- --- layout.o --- --- matrix.o --- --- gpar.o --- gcc6 -I../../../../include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c gpar.c -o gpar.o --- grid.o --- gcc6 -I../../../../include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c grid.c -o grid.o --- just.o --- gcc6 -I../../../../include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c just.c -o just.o --- matrix.o --- gcc6 -I../../../../include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c matrix.c -o matrix.o --- layout.o --- gcc6 -I../../../../include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c layout.c -o layout.o --- register.o --- gcc6 -I../../../../include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c register.c -o register.o --- state.o --- gcc6 -I../../../../include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c state.c -o state.o --- unit.o --- gcc6 -I../../../../include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c unit.c -o unit.o --- util.o --- gcc6 -I../../../../include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c util.c -o util.o --- viewport.o --- gcc6 -I../../../../include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c viewport.c -o viewport.o --- gpar.d --- making gpar.d from gpar.c --- grid.d --- --- just.d --- making just.d from just.c --- grid.d --- making grid.d from grid.c --- layout.d --- making layout.d from layout.c --- matrix.d --- making matrix.d from matrix.c --- register.d --- making register.d from register.c --- state.d --- making state.d from state.c --- unit.d --- making unit.d from unit.c --- util.d --- making util.d from util.c --- viewport.d --- making viewport.d from viewport.c --- Makedeps --- --- grid.so --- gcc6 -shared -L../../../../lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o grid.so gpar.o grid.o just.o layout.o matrix.o register.o state.o unit.o util.o viewport.o -L../../../../lib -lR --- all --- --- shlib --- mkdir ../../../../library/grid/libs --- ../../../library/grid/R/grid.rdb --- byte-compiling package 'grid' --- all --- building package 'splines' mkdir ../../../library/splines --- mkR1 --- --- mkdesc --- --- mkR1 --- mkdir ../../../library/splines/R --- mksrc --- --- splines.o --- --- splines.d --- --- splines.o --- gcc6 -I../../../../include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c splines.c -o splines.o --- splines.d --- making splines.d from splines.c --- Makedeps --- --- splines.so --- gcc6 -shared -L../../../../lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o splines.so splines.o -L../../../../lib -lR --- all --- --- shlib --- mkdir ../../../../library/splines/libs --- ../../../library/splines/R/splines.rdb --- byte-compiling package 'splines' --- all --- building package 'stats4' mkdir ../../../library/stats4 --- mkR2 --- --- mkdesc --- --- mkR2 --- mkdir ../../../library/stats4/R --- ../../../library/stats4/R/stats4.rdb --- byte-compiling package 'stats4' --- all --- building package 'tcltk' mkdir ../../../library/tcltk mkdir ../../../library/tcltk/R --- mkdesc --- --- mkexec --- --- mkdemos --- --- mkexec --- mkdir ../../../library/tcltk/exec --- init.o --- --- tcltk.o --- --- tcltk_unix.o --- --- init.d --- --- tcltk.d --- --- init.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include/tcl8.6 -I/usr/local/include/tk8.6 -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c init.c -o init.o --- tcltk.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include/tcl8.6 -I/usr/local/include/tk8.6 -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c tcltk.c -o tcltk.o --- tcltk_unix.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include/tcl8.6 -I/usr/local/include/tk8.6 -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c tcltk_unix.c -o tcltk_unix.o --- init.d --- making init.d from init.c --- tcltk.d --- making tcltk.d from tcltk.c --- tcltk_unix.d --- making tcltk_unix.d from tcltk_unix.c --- Makedeps --- --- tcltk.so --- gcc6 -shared -L../../../../lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o tcltk.so init.o tcltk.o tcltk_unix.o -L/usr/local/lib -ltcl86 -L/usr/local/lib -ltk86 -L/usr/local/lib -lX11 -lXss -lXext -lm -L../../../../lib -lR --- all --- --- shlib --- mkdir ../../../../library/tcltk/libs --- ../../../library/tcltk/R/tcltk.rdb --- byte-compiling package 'tcltk' --- all --- building package 'parallel' mkdir ../../../library/parallel mkdir ../../../library/parallel/doc --- mkR1 --- --- mkdesc --- --- instdirs --- --- mkR1 --- mkdir ../../../library/parallel/R --- mksrc --- --- init.o --- --- rngstream.o --- --- fork.o --- --- init.d --- --- rngstream.d --- --- rngstream.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rngstream.c -o rngstream.o --- fork.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c fork.c -o fork.o --- rngstream.d --- making rngstream.d from rngstream.c --- init.o --- gcc6 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c init.c -o init.o --- init.d --- making init.d from init.c --- fork.d --- making fork.d from fork.c --- Makedeps --- --- parallel.so --- gcc6 -shared -L../../../../lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o parallel.so init.o rngstream.o fork.o -L../../../../lib -lR --- all --- --- shlib --- mkdir ../../../../library/parallel/libs --- ../../../library/parallel/R/parallel.rdb --- byte-compiling package 'parallel' --- mkdesc --- installing parsed NAMESPACE files you should 'make docs' now ... --- docs --- --- javaconf --- --- stamp-java --- --- docs --- --- R.1 --- --- NEWS.rds --- --- NEWS --- --- html/NEWS.html --- --- NEWS.pdf --- --- NEWS --- creating NEWS --- NEWS.pdf --- 'pdflatex' is needed to make NEWS.pdf but is missing on your system. --- docs --- --- stamp-images-html --- --- R-FAQ.html --- --- version.texi --- --- R-FAQ.html --- creating doc/manual/R-FAQ.html --- version.texi --- creating doc/manual/version.texi --- R-admin.html --- --- R-data.html --- --- R-exts.html --- --- R-intro.html --- --- R-admin.html --- creating doc/manual/R-admin.html --- R-data.html --- creating doc/manual/R-data.html --- R-exts.html --- creating doc/manual/R-exts.html --- R-intro.html --- creating doc/manual/R-intro.html --- R-ints.html --- creating doc/manual/R-ints.html --- R-lang.html --- creating doc/manual/R-lang.html --- html --- --- index.html --- --- docs --- --- Rdobjects --- installing parsed Rd --- base.Rdts --- --- stats.Rdts --- --- utils.Rdts --- --- methods.Rdts --- --- graphics.Rdts --- --- methods.Rdts --- methods --- grDevices.Rdts --- --- graphics.Rdts --- graphics --- datasets.Rdts --- --- utils.Rdts --- utils --- grid.Rdts --- --- grDevices.Rdts --- grDevices --- tools.Rdts --- --- datasets.Rdts --- datasets --- tools.Rdts --- tools --- tcltk.Rdts --- --- splines.Rdts --- splines --- stats4.Rdts --- --- tcltk.Rdts --- tcltk --- compiler.Rdts --- compiler --- parallel.Rdts --- --- stats4.Rdts --- stats4 --- grid.Rdts --- grid --- parallel.Rdts --- parallel --- stats.Rdts --- stats --- base.Rdts --- base --- metadata --- building/updating package metadata ... --- help-indices --- writing package indices --- base.Rdh --- --- tools.Rdh --- --- utils.Rdh --- --- grDevices.Rdh --- --- graphics.Rdh --- --- stats.Rdh --- --- datasets.Rdh --- --- methods.Rdh --- --- grid.Rdh --- --- splines.Rdh --- --- stats4.Rdh --- --- tcltk.Rdh --- --- compiler.Rdh --- --- parallel.Rdh --- --- stamp-recommended --- --- recommended-packages --- --- MASS.ts --- --- lattice.ts --- --- codetools.ts --- --- foreign.ts --- --- KernSmooth.ts --- --- MASS.ts --- begin installing recommended package MASS --- lattice.ts --- begin installing recommended package lattice --- codetools.ts --- begin installing recommended package codetools --- foreign.ts --- begin installing recommended package foreign --- KernSmooth.ts --- begin installing recommended package KernSmooth --- codetools.ts --- * installing *source* package 'codetools' ... ** package 'codetools' successfully unpacked and MD5 sums checked ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (codetools) --- rpart.ts --- begin installing recommended package rpart --- KernSmooth.ts --- * installing *source* package 'KernSmooth' ... ** package 'KernSmooth' successfully unpacked and MD5 sums checked ** libs --- blkest.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c blkest.f -o blkest.o --- cp.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c cp.f -o cp.o --- dgedi.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c dgedi.f -o dgedi.o --- dgefa.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c dgefa.f -o dgefa.o --- dgesl.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c dgesl.f -o dgesl.o --- init.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c init.c -o init.o --- linbin.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c linbin.f -o linbin.o --- linbin2D.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c linbin2D.f -o linbin2D.o --- locpoly.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c locpoly.f -o locpoly.o --- rlbin.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c rlbin.f -o rlbin.o --- sdiag.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c sdiag.f -o sdiag.o --- sstdiag.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c sstdiag.f -o sstdiag.o --- KernSmooth.so --- gcc6 -shared -L/wrkdirs/math/R/R-3.3.2/lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o KernSmooth.so blkest.o cp.o dgedi.o dgefa.o dgesl.o init.o linbin.o linbin2D.o locpoly.o rlbin.o sdiag.o sstdiag.o -L/wrkdirs/math/R/R-3.3.2/lib -lRblas -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.7/5.4.0 -lgfortran -lm -lquadmath -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.7/5.4.0 -lgfortran -lm -lquadmath -L/wrkdirs/math/R/R-3.3.2/lib -lR installing to /wrkdirs/math/R/R-3.3.2/library/KernSmooth/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (KernSmooth) --- nnet.ts --- begin installing recommended package nnet * installing *source* package 'nnet' ... ** package 'nnet' successfully unpacked and MD5 sums checked ** libs --- nnet.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c nnet.c -o nnet.o --- nnet.so --- gcc6 -shared -L/wrkdirs/math/R/R-3.3.2/lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o nnet.so nnet.o -L/wrkdirs/math/R/R-3.3.2/lib -lR installing to /wrkdirs/math/R/R-3.3.2/library/nnet/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (nnet) --- spatial.ts --- begin installing recommended package spatial --- foreign.ts --- * installing *source* package 'foreign' ... ** package 'foreign' successfully unpacked and MD5 sums checked ** libs --- R_systat.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c R_systat.c -o R_systat.o --- Rdbfread.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c Rdbfread.c -o Rdbfread.o --- Rdbfwrite.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c Rdbfwrite.c -o Rdbfwrite.o --- SASxport.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c SASxport.c -o SASxport.o --- avl.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c avl.c -o avl.o --- dbfopen.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dbfopen.c -o dbfopen.o --- file-handle.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c file-handle.c -o file-handle.o --- format.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c format.c -o format.o --- init.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c init.c -o init.o --- minitab.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c minitab.c -o minitab.o --- pfm-read.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pfm-read.c -o pfm-read.o --- sfm-read.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c sfm-read.c -o sfm-read.o --- spss.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c spss.c -o spss.o --- stataread.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c stataread.c -o stataread.o --- foreign.so --- gcc6 -shared -L/wrkdirs/math/R/R-3.3.2/lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o foreign.so R_systat.o Rdbfread.o Rdbfwrite.o SASxport.o avl.o dbfopen.o file-handle.o format.o init.o minitab.o pfm-read.o sfm-read.o spss.o stataread.o -L/wrkdirs/math/R/R-3.3.2/lib -lR installing to /wrkdirs/math/R/R-3.3.2/library/foreign/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (foreign) --- rpart.ts --- * installing *source* package 'rpart' ... ** package 'rpart' successfully unpacked and MD5 sums checked ** libs --- anova.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c anova.c -o anova.o --- anovapred.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c anovapred.c -o anovapred.o --- branch.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c branch.c -o branch.o --- bsplit.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c bsplit.c -o bsplit.o --- choose_surg.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c choose_surg.c -o choose_surg.o --- fix_cp.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c fix_cp.c -o fix_cp.o --- free_tree.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c free_tree.c -o free_tree.o --- gini.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c gini.c -o gini.o --- graycode.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c graycode.c -o graycode.o --- init.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c init.c -o init.o --- insert_split.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c insert_split.c -o insert_split.o --- make_cp_list.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c make_cp_list.c -o make_cp_list.o --- make_cp_table.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c make_cp_table.c -o make_cp_table.o --- mysort.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c mysort.c -o mysort.o --- nodesplit.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c nodesplit.c -o nodesplit.o --- partition.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c partition.c -o partition.o --- poisson.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c poisson.c -o poisson.o --- pred_rpart.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pred_rpart.c -o pred_rpart.o --- print_tree.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c print_tree.c -o print_tree.o --- rpart.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rpart.c -o rpart.o --- rpart_callback.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rpart_callback.c -o rpart_callback.o --- rpartexp.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rpartexp.c -o rpartexp.o --- rpartexp2.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rpartexp2.c -o rpartexp2.o --- rpcountup.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rpcountup.c -o rpcountup.o --- rpmatrix.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rpmatrix.c -o rpmatrix.o --- rundown.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rundown.c -o rundown.o --- rundown2.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c rundown2.c -o rundown2.o --- surrogate.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c surrogate.c -o surrogate.o --- usersplit.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c usersplit.c -o usersplit.o --- xpred.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c xpred.c -o xpred.o --- xval.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c xval.c -o xval.o --- rpart.so --- gcc6 -shared -L/wrkdirs/math/R/R-3.3.2/lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o rpart.so anova.o anovapred.o branch.o bsplit.o choose_surg.o fix_cp.o free_tree.o gini.o graycode.o init.o insert_split.o make_cp_list.o make_cp_table.o mysort.o nodesplit.o partition.o poisson.o pred_rpart.o print_tree.o rpart.o rpart_callback.o rpartexp.o rpartexp2.o rpcountup.o rpmatrix.o rundown.o rundown2.o surrogate.o usersplit.o xpred.o xval.o -L/wrkdirs/math/R/R-3.3.2/lib -lR installing to /wrkdirs/math/R/R-3.3.2/library/rpart/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (rpart) --- spatial.ts --- * installing *source* package 'spatial' ... ** package 'spatial' successfully unpacked and MD5 sums checked ** libs --- init.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c init.c -o init.o --- krc.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c krc.c -o krc.o --- pps.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pps.c -o pps.o --- spatial.so --- gcc6 -shared -L/wrkdirs/math/R/R-3.3.2/lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o spatial.so init.o krc.o pps.o -L/wrkdirs/math/R/R-3.3.2/lib -lR installing to /wrkdirs/math/R/R-3.3.2/library/spatial/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (spatial) --- MASS.ts --- * installing *source* package 'MASS' ... ** package 'MASS' successfully unpacked and MD5 sums checked ** libs --- MASS.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c MASS.c -o MASS.o --- lqs.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c lqs.c -o lqs.o --- MASS.so --- gcc6 -shared -L/wrkdirs/math/R/R-3.3.2/lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o MASS.so MASS.o lqs.o -L/wrkdirs/math/R/R-3.3.2/lib -lR installing to /wrkdirs/math/R/R-3.3.2/library/MASS/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (MASS) --- class.ts --- --- cluster.ts --- --- class.ts --- begin installing recommended package class --- cluster.ts --- begin installing recommended package cluster --- lattice.ts --- * installing *source* package 'lattice' ... ** package 'lattice' successfully unpacked and MD5 sums checked ** libs --- init.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c init.c -o init.o --- threeDplot.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c threeDplot.c -o threeDplot.o --- lattice.so --- gcc6 -shared -L/wrkdirs/math/R/R-3.3.2/lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o lattice.so init.o threeDplot.o -L/wrkdirs/math/R/R-3.3.2/lib -lR installing to /wrkdirs/math/R/R-3.3.2/library/lattice/libs ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (lattice) --- Matrix.ts --- --- nlme.ts --- --- Matrix.ts --- begin installing recommended package Matrix --- nlme.ts --- begin installing recommended package nlme --- class.ts --- * installing *source* package 'class' ... ** package 'class' successfully unpacked and MD5 sums checked ** libs --- class.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c class.c -o class.o --- class.so --- gcc6 -shared -L/wrkdirs/math/R/R-3.3.2/lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o class.so class.o -L/wrkdirs/math/R/R-3.3.2/lib -lR installing to /wrkdirs/math/R/R-3.3.2/library/class/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (class) --- cluster.ts --- * installing *source* package 'cluster' ... ** package 'cluster' successfully unpacked and MD5 sums checked ** libs --- clara.o --- --- daisy.o --- --- dysta.o --- --- daisy.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c daisy.f -o daisy.o --- dysta.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c dysta.f -o dysta.o --- clara.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c clara.c -o clara.o --- fanny.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c fanny.c -o fanny.o --- init.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c init.c -o init.o --- mona.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c mona.f -o mona.o --- pam.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pam.c -o pam.o --- sildist.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c sildist.c -o sildist.o --- spannel.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c spannel.c -o spannel.o --- twins.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c twins.c -o twins.o --- cluster.so --- gcc6 -shared -L/wrkdirs/math/R/R-3.3.2/lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o cluster.so clara.o daisy.o dysta.o fanny.o init.o mona.o pam.o sildist.o spannel.o twins.o -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.7/5.4.0 -lgfortran -lm -lquadmath -L/wrkdirs/math/R/R-3.3.2/lib -lR installing to /wrkdirs/math/R/R-3.3.2/library/cluster/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (cluster) --- nlme.ts --- * installing *source* package 'nlme' ... ** package 'nlme' successfully unpacked and MD5 sums checked ** libs --- chol.o --- --- corStruct.o --- --- gnls.o --- --- chol.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c chol.f -o chol.o --- corStruct.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c corStruct.c -o corStruct.o --- gnls.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c gnls.c -o gnls.o --- init.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c init.c -o init.o --- matrix.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c matrix.c -o matrix.o --- nlOptimizer.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c nlOptimizer.c -o nlOptimizer.o --- nlme.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c nlme.c -o nlme.o --- nlmefit.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c nlmefit.c -o nlmefit.o --- pdMat.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pdMat.c -o pdMat.o --- rs.o --- gfortran5 -fpic -O -Wl,-rpath=/usr/local/lib/gcc5 -c rs.f -o rs.o --- nlme.so --- gcc6 -shared -L/wrkdirs/math/R/R-3.3.2/lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o nlme.so chol.o corStruct.o gnls.o init.o matrix.o nlOptimizer.o nlme.o nlmefit.o pdMat.o rs.o -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.7/5.4.0 -lgfortran -lm -lquadmath -L/wrkdirs/math/R/R-3.3.2/lib -lR installing to /wrkdirs/math/R/R-3.3.2/library/nlme/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (nlme) --- Matrix.ts --- * installing *source* package 'Matrix' ... ** package 'Matrix' successfully unpacked and MD5 sums checked ** libs --- subclean --- --- clean --- ( cd Lib ; /usr/bin/make clean ) --- clean --- --- clean --- ( cd Source ; /usr/bin/make clean ) --- clean --- --- clean --- ( cd Source ; /usr/bin/make clean ) --- clean --- --- clean --- --- sublibraries --- --- library --- ( cd Lib ; /usr/bin/make ) --- cholmod_l_aat.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Core/cholmod_aat.c -o cholmod_l_aat.o --- cholmod_l_add.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Core/cholmod_add.c -o cholmod_l_add.o --- cholmod_l_band.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Core/cholmod_band.c -o cholmod_l_band.o --- cholmod_l_change_factor.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Core/cholmod_change_factor.c -o cholmod_l_change_factor.o --- cholmod_l_common.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Core/cholmod_common.c -o cholmod_l_common.o --- CHMfactor.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c CHMfactor.c -o CHMfactor.o --- sublibraries --- --- cholmod_l_complex.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Core/cholmod_complex.c -o cholmod_l_complex.o --- cholmod_l_copy.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Core/cholmod_copy.c -o cholmod_l_copy.o --- Csparse.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c Csparse.c -o Csparse.o --- sublibraries --- --- cholmod_l_dense.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Core/cholmod_dense.c -o cholmod_l_dense.o --- cholmod_l_error.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Core/cholmod_error.c -o cholmod_l_error.o --- cholmod_l_factor.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Core/cholmod_factor.c -o cholmod_l_factor.o --- cholmod_l_memory.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Core/cholmod_memory.c -o cholmod_l_memory.o --- cholmod_l_sparse.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Core/cholmod_sparse.c -o cholmod_l_sparse.o --- cholmod_l_transpose.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Core/cholmod_transpose.c -o cholmod_l_transpose.o --- cholmod_l_triplet.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Core/cholmod_triplet.c -o cholmod_l_triplet.o --- TMatrix_as.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c TMatrix_as.c -o TMatrix_as.o --- Tsparse.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c Tsparse.c -o Tsparse.o --- init.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c init.c -o init.o --- Mutils.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c Mutils.c -o Mutils.o --- sublibraries --- --- cholmod_l_version.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Core/cholmod_version.c -o cholmod_l_version.o --- cholmod_l_check.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Check/cholmod_check.c -o cholmod_l_check.o --- cholmod_l_read.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Check/cholmod_read.c -o cholmod_l_read.o --- cholmod_l_write.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Check/cholmod_write.c -o cholmod_l_write.o --- cholmod_l_amd.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Cholesky/cholmod_amd.c -o cholmod_l_amd.o --- cholmod_l_analyze.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Cholesky/cholmod_analyze.c -o cholmod_l_analyze.o --- chm_common.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c chm_common.c -o chm_common.o --- sublibraries --- --- cholmod_l_colamd.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Cholesky/cholmod_colamd.c -o cholmod_l_colamd.o --- cholmod_l_etree.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Cholesky/cholmod_etree.c -o cholmod_l_etree.o --- cholmod_l_factorize.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Cholesky/cholmod_factorize.c -o cholmod_l_factorize.o --- cholmod_l_postorder.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Cholesky/cholmod_postorder.c -o cholmod_l_postorder.o --- cholmod_l_rcond.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Cholesky/cholmod_rcond.c -o cholmod_l_rcond.o --- cs.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c cs.c -o cs.o --- sublibraries --- --- cholmod_l_resymbol.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Cholesky/cholmod_resymbol.c -o cholmod_l_resymbol.o --- cholmod_l_rowcolcounts.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Cholesky/cholmod_rowcolcounts.c -o cholmod_l_rowcolcounts.o --- cholmod_l_rowfac.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Cholesky/cholmod_rowfac.c -o cholmod_l_rowfac.o --- cholmod_l_solve.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Cholesky/cholmod_solve.c -o cholmod_l_solve.o --- cholmod_l_spsolve.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Cholesky/cholmod_spsolve.c -o cholmod_l_spsolve.o --- cholmod_l_drop.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../MatrixOps/cholmod_drop.c -o cholmod_l_drop.o --- cholmod_l_horzcat.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../MatrixOps/cholmod_horzcat.c -o cholmod_l_horzcat.o --- cholmod_l_norm.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../MatrixOps/cholmod_norm.c -o cholmod_l_norm.o --- cholmod_l_scale.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../MatrixOps/cholmod_scale.c -o cholmod_l_scale.o --- cholmod_l_sdmult.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../MatrixOps/cholmod_sdmult.c -o cholmod_l_sdmult.o --- cholmod_l_ssmult.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../MatrixOps/cholmod_ssmult.c -o cholmod_l_ssmult.o --- cholmod_l_submatrix.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../MatrixOps/cholmod_submatrix.c -o cholmod_l_submatrix.o --- cs_utils.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c cs_utils.c -o cs_utils.o --- sublibraries --- --- cholmod_l_vertcat.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../MatrixOps/cholmod_vertcat.c -o cholmod_l_vertcat.o --- dense.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dense.c -o dense.o --- sublibraries --- --- cholmod_l_symmetry.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../MatrixOps/cholmod_symmetry.c -o cholmod_l_symmetry.o --- cholmod_l_rowadd.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Modify/cholmod_rowadd.c -o cholmod_l_rowadd.o --- cholmod_l_rowdel.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Modify/cholmod_rowdel.c -o cholmod_l_rowdel.o --- dgCMatrix.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dgCMatrix.c -o dgCMatrix.o --- sublibraries --- --- cholmod_l_updown.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Modify/cholmod_updown.c -o cholmod_l_updown.o --- dgTMatrix.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dgTMatrix.c -o dgTMatrix.o --- dgeMatrix.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dgeMatrix.c -o dgeMatrix.o --- dpoMatrix.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dpoMatrix.c -o dpoMatrix.o --- sublibraries --- --- cholmod_l_super_numeric.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Supernodal/cholmod_super_numeric.c -o cholmod_l_super_numeric.o --- dppMatrix.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dppMatrix.c -o dppMatrix.o --- dsCMatrix.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dsCMatrix.c -o dsCMatrix.o --- dsyMatrix.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dsyMatrix.c -o dsyMatrix.o --- dspMatrix.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dspMatrix.c -o dspMatrix.o --- dtCMatrix.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dtCMatrix.c -o dtCMatrix.o --- dtTMatrix.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dtTMatrix.c -o dtTMatrix.o --- dtrMatrix.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dtrMatrix.c -o dtrMatrix.o --- dtpMatrix.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dtpMatrix.c -o dtpMatrix.o --- sublibraries --- --- cholmod_l_super_solve.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Supernodal/cholmod_super_solve.c -o cholmod_l_super_solve.o --- factorizations.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c factorizations.c -o factorizations.o --- ldense.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ldense.c -o ldense.o --- lgCMatrix.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c lgCMatrix.c -o lgCMatrix.o --- sublibraries --- --- cholmod_l_super_symbolic.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -DDLONG -c ../Supernodal/cholmod_super_symbolic.c -o cholmod_l_super_symbolic.o --- sparseQR.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c sparseQR.c -o sparseQR.o --- sublibraries --- --- cholmod_aat.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Core/cholmod_aat.c -o cholmod_aat.o --- cholmod_add.o --- --- cholmod_band.o --- --- cholmod_add.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Core/cholmod_add.c -o cholmod_add.o --- cholmod_band.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Core/cholmod_band.c -o cholmod_band.o --- cholmod_change_factor.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Core/cholmod_change_factor.c -o cholmod_change_factor.o --- abIndex.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c abIndex.c -o abIndex.o --- sublibraries --- --- cholmod_common.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Core/cholmod_common.c -o cholmod_common.o --- cholmod_complex.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Core/cholmod_complex.c -o cholmod_complex.o --- cholmod_copy.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Core/cholmod_copy.c -o cholmod_copy.o --- cholmod_dense.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Core/cholmod_dense.c -o cholmod_dense.o --- cholmod_error.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Core/cholmod_error.c -o cholmod_error.o --- cholmod_factor.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Core/cholmod_factor.c -o cholmod_factor.o --- cholmod_memory.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Core/cholmod_memory.c -o cholmod_memory.o --- cholmod_sparse.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Core/cholmod_sparse.c -o cholmod_sparse.o --- cholmod_transpose.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Core/cholmod_transpose.c -o cholmod_transpose.o --- cholmod_triplet.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Core/cholmod_triplet.c -o cholmod_triplet.o --- cholmod_version.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Core/cholmod_version.c -o cholmod_version.o --- cholmod_check.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Check/cholmod_check.c -o cholmod_check.o --- cholmod_read.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Check/cholmod_read.c -o cholmod_read.o --- cholmod_write.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Check/cholmod_write.c -o cholmod_write.o --- cholmod_amd.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Cholesky/cholmod_amd.c -o cholmod_amd.o --- cholmod_analyze.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Cholesky/cholmod_analyze.c -o cholmod_analyze.o --- cholmod_colamd.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Cholesky/cholmod_colamd.c -o cholmod_colamd.o --- cholmod_etree.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Cholesky/cholmod_etree.c -o cholmod_etree.o --- cholmod_factorize.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Cholesky/cholmod_factorize.c -o cholmod_factorize.o --- cholmod_postorder.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Cholesky/cholmod_postorder.c -o cholmod_postorder.o --- cholmod_rcond.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Cholesky/cholmod_rcond.c -o cholmod_rcond.o --- cholmod_resymbol.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Cholesky/cholmod_resymbol.c -o cholmod_resymbol.o --- cholmod_rowcolcounts.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Cholesky/cholmod_rowcolcounts.c -o cholmod_rowcolcounts.o --- cholmod_rowfac.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Cholesky/cholmod_rowfac.c -o cholmod_rowfac.o --- cholmod_solve.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Cholesky/cholmod_solve.c -o cholmod_solve.o --- cholmod_spsolve.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Cholesky/cholmod_spsolve.c -o cholmod_spsolve.o --- cholmod_drop.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../MatrixOps/cholmod_drop.c -o cholmod_drop.o --- cholmod_horzcat.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../MatrixOps/cholmod_horzcat.c -o cholmod_horzcat.o --- cholmod_norm.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../MatrixOps/cholmod_norm.c -o cholmod_norm.o --- cholmod_scale.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../MatrixOps/cholmod_scale.c -o cholmod_scale.o --- cholmod_sdmult.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../MatrixOps/cholmod_sdmult.c -o cholmod_sdmult.o --- cholmod_ssmult.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../MatrixOps/cholmod_ssmult.c -o cholmod_ssmult.o --- cholmod_submatrix.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../MatrixOps/cholmod_submatrix.c -o cholmod_submatrix.o --- cholmod_vertcat.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../MatrixOps/cholmod_vertcat.c -o cholmod_vertcat.o --- cholmod_symmetry.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../MatrixOps/cholmod_symmetry.c -o cholmod_symmetry.o --- cholmod_rowadd.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Modify/cholmod_rowadd.c -o cholmod_rowadd.o --- cholmod_rowdel.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Modify/cholmod_rowdel.c -o cholmod_rowdel.o --- cholmod_updown.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Modify/cholmod_updown.c -o cholmod_updown.o --- cholmod_super_numeric.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Supernodal/cholmod_super_numeric.c -o cholmod_super_numeric.o --- cholmod_super_solve.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Supernodal/cholmod_super_solve.c -o cholmod_super_solve.o --- cholmod_super_symbolic.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c ../Supernodal/cholmod_super_symbolic.c -o cholmod_super_symbolic.o --- ../../CHOLMOD.a --- /usr/local/bin/ar -rucs ../../CHOLMOD.a cholmod_aat.o cholmod_add.o cholmod_band.o cholmod_change_factor.o cholmod_common.o cholmod_complex.o cholmod_copy.o cholmod_dense.o cholmod_error.o cholmod_factor.o cholmod_memory.o cholmod_sparse.o cholmod_transpose.o cholmod_triplet.o cholmod_version.o cholmod_check.o cholmod_read.o cholmod_write.o cholmod_amd.o cholmod_analyze.o cholmod_colamd.o cholmod_etree.o cholmod_factorize.o cholmod_postorder.o cholmod_rcond.o cholmod_resymbol.o cholmod_rowcolcounts.o cholmod_rowfac.o cholmod_solve.o cholmod_spsolve.o cholmod_drop.o cholmod_horzcat.o cholmod_norm.o cholmod_scale.o cholmod_sdmult.o cholmod_ssmult.o cholmod_submatrix.o cholmod_vertcat.o cholmod_symmetry.o cholmod_rowadd.o cholmod_rowdel.o cholmod_updown.o cholmod_super_numeric.o cholmod_super_solve.o cholmod_super_symbolic.o cholmod_l_aat.o cholmod_l_add.o cholmod_l_band.o cholmod_l_change_factor.o cholmod_l_common.o cholmod_l_complex.o cholmod_l_copy.o cholmod_l_dense.o cholmod_l_error.o cholmod_l_factor.o cholmod_l_memory.o cholmod_l_sparse.o cholmod_l_transpose.o cholmod_l_triplet.o cholmod_l_version.o cholmod_l_check.o cholmod_l_read.o cholmod_l_write.o cholmod_l_amd.o cholmod_l_analyze.o cholmod_l_colamd.o cholmod_l_etree.o cholmod_l_factorize.o cholmod_l_postorder.o cholmod_l_rcond.o cholmod_l_resymbol.o cholmod_l_rowcolcounts.o cholmod_l_rowfac.o cholmod_l_solve.o cholmod_l_spsolve.o cholmod_l_drop.o cholmod_l_horzcat.o cholmod_l_norm.o cholmod_l_scale.o cholmod_l_sdmult.o cholmod_l_ssmult.o cholmod_l_submatrix.o cholmod_l_vertcat.o cholmod_l_symmetry.o cholmod_l_rowadd.o cholmod_l_rowdel.o cholmod_l_updown.o cholmod_l_super_numeric.o cholmod_l_super_solve.o cholmod_l_super_symbolic.o /usr/local/bin/ar: `u' modifier ignored since `D' is the default (see `U') --- library --- ( cd Source ; /usr/bin/make lib ) --- colamd_l.o --- --- colamd_global.o --- --- colamd.o --- --- colamd_global.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c colamd_global.c -o colamd_global.o --- colamd.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c colamd.c -o colamd.o --- colamd_l.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDLONG -c colamd.c -o colamd_l.o --- ../../COLAMD.a --- /usr/local/bin/ar -rucs ../../COLAMD.a colamd_global.o colamd.o colamd_l.o /usr/local/bin/ar: `u' modifier ignored since `D' is the default (see `U') --- library --- ( cd Source ; /usr/bin/make lib ) --- amd_l_aat.o --- --- amd_l_1.o --- --- amd_l_2.o --- --- amd_l_postorder.o --- --- amd_l_1.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDLONG -c amd_1.c -o amd_l_1.o --- amd_l_2.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDLONG -c amd_2.c -o amd_l_2.o --- amd_l_postorder.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDLONG -c amd_postorder.c -o amd_l_postorder.o --- amd_l_aat.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDLONG -c amd_aat.c -o amd_l_aat.o --- amd_l_post_tree.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDLONG -c amd_post_tree.c -o amd_l_post_tree.o --- amd_l_defaults.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDLONG -c amd_defaults.c -o amd_l_defaults.o --- amd_l_order.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDLONG -c amd_order.c -o amd_l_order.o --- amd_l_control.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDLONG -c amd_control.c -o amd_l_control.o --- amd_l_info.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDLONG -c amd_info.c -o amd_l_info.o --- amd_l_valid.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDLONG -c amd_valid.c -o amd_l_valid.o --- amd_l_preprocess.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDLONG -c amd_preprocess.c -o amd_l_preprocess.o --- amd_l_dump.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDLONG -c amd_dump.c -o amd_l_dump.o --- amd_l_global.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDLONG -c amd_global.c -o amd_l_global.o --- amd_i_aat.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDINT -c amd_aat.c -o amd_i_aat.o --- amd_i_1.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDINT -c amd_1.c -o amd_i_1.o --- amd_i_2.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDINT -c amd_2.c -o amd_i_2.o --- amd_i_postorder.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDINT -c amd_postorder.c -o amd_i_postorder.o --- amd_i_post_tree.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDINT -c amd_post_tree.c -o amd_i_post_tree.o --- amd_i_defaults.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDINT -c amd_defaults.c -o amd_i_defaults.o --- amd_i_order.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDINT -c amd_order.c -o amd_i_order.o --- amd_i_control.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDINT -c amd_control.c -o amd_i_control.o --- amd_i_info.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDINT -c amd_info.c -o amd_i_info.o --- amd_i_valid.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDINT -c amd_valid.c -o amd_i_valid.o --- amd_i_preprocess.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDINT -c amd_preprocess.c -o amd_i_preprocess.o --- amd_i_dump.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDINT -c amd_dump.c -o amd_i_dump.o --- amd_i_global.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -I../Include -I../../SuiteSparse_config -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -I../Include -DDINT -c amd_global.c -o amd_i_global.o --- ../../AMD.a --- /usr/local/bin/ar -rucs ../../AMD.a amd_i_aat.o amd_l_aat.o amd_i_1.o amd_l_1.o amd_i_2.o amd_l_2.o amd_i_postorder.o amd_l_postorder.o amd_i_post_tree.o amd_l_post_tree.o amd_i_defaults.o amd_l_defaults.o amd_i_order.o amd_l_order.o amd_i_control.o amd_l_control.o amd_i_info.o amd_l_info.o amd_i_valid.o amd_l_valid.o amd_i_preprocess.o amd_l_preprocess.o amd_i_dump.o amd_l_dump.o amd_i_global.o amd_l_global.o /usr/local/bin/ar: `u' modifier ignored since `D' is the default (see `U') --- SuiteSparse_config.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DNTIMER -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c SuiteSparse_config.c -o SuiteSparse_config.o --- ../SuiteSparse_config.a --- /usr/local/bin/ar -rucs ../SuiteSparse_config.a SuiteSparse_config.o /usr/local/bin/ar: `u' modifier ignored since `D' is the default (see `U') --- Matrix.so --- gcc6 -shared -L/wrkdirs/math/R/R-3.3.2/lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o Matrix.so CHMfactor.o Csparse.o TMatrix_as.o Tsparse.o init.o Mutils.o chm_common.o cs.o cs_utils.o dense.o dgCMatrix.o dgTMatrix.o dgeMatrix.o dpoMatrix.o dppMatrix.o dsCMatrix.o dsyMatrix.o dspMatrix.o dtCMatrix.o dtTMatrix.o dtrMatrix.o dtpMatrix.o factorizations.o ldense.o lgCMatrix.o sparseQR.o abIndex.o CHOLMOD.a COLAMD.a AMD.a SuiteSparse_config.a -L/wrkdirs/math/R/R-3.3.2/lib -lRlapack -L/wrkdirs/math/R/R-3.3.2/lib -lRblas -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.7/5.4.0 -lgfortran -lm -lquadmath -L/wrkdirs/math/R/R-3.3.2/lib -lR installing to /wrkdirs/math/R/R-3.3.2/library/Matrix/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for 'chol2inv' from 'base' in package 'Matrix' (from the saved implicit definition) Creating a generic function for 'chol2inv' from package 'base' in package 'Matrix' Creating a generic function for 'diag' from package 'base' in package 'Matrix' Creating a generic function for 'drop' from package 'base' in package 'Matrix' Creating a generic function for 'cov2cor' from package 'stats' in package 'Matrix' Creating a generic function for 'unname' from package 'base' in package 'Matrix' Creating a generic function for 'norm' from package 'base' in package 'Matrix' Creating a generic function for 'rcond' from 'base' in package 'Matrix' (from the saved implicit definition) Creating a generic function for 'rcond' from package 'base' in package 'Matrix' in method for 'coerce' with signature '"matrix.csr","dgRMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"dgRMatrix","matrix.csr"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.csc","dgCMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"dgCMatrix","matrix.csc"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.coo","dgTMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"dgTMatrix","matrix.coo"': no definition for class "matrix.coo" in method for 'coerce' with signature '"dsparseMatrix","matrix.csr"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.csr","dgCMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","dgCMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csr","RsparseMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.csc","CsparseMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.coo","TsparseMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csr","CsparseMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","CsparseMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csc","TsparseMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csr","TsparseMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"CsparseMatrix","matrix.csr"': no definition for class "matrix.csr" in method for 'coerce' with signature '"CsparseMatrix","matrix.coo"': no definition for class "matrix.coo" in method for 'coerce' with signature '"CsparseMatrix","matrix.csc"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csr","Matrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","Matrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csc","Matrix"': no definition for class "matrix.csc" Creating a generic function for 'colSums' from package 'base' in package 'Matrix' Creating a generic function for 'colMeans' from package 'base' in package 'Matrix' Creating a generic function for 'rowSums' from package 'base' in package 'Matrix' Creating a generic function for 'rowMeans' from package 'base' in package 'Matrix' in method for 'colSums' with signature 'x="igCMatrix"': no definition for class "igCMatrix" in method for 'rowSums' with signature 'x="igCMatrix"': no definition for class "igCMatrix" in method for 'colMeans' with signature 'x="igCMatrix"': no definition for class "igCMatrix" in method for 'rowMeans' with signature 'x="igCMatrix"': no definition for class "igCMatrix" Creating a generic function for 'zapsmall' from package 'base' in package 'Matrix' Creating a generic function for 'diag<-' from package 'base' in package 'Matrix' Creating a generic function for 'crossprod' from package 'base' in package 'Matrix' Creating a generic function for 'tcrossprod' from package 'base' in package 'Matrix' Creating a generic function for 'which' from package 'base' in package 'Matrix' in method for 'coerce' with signature '"graphAM","sparseMatrix"': no definition for class "graphAM" in method for 'coerce' with signature '"graph","CsparseMatrix"': no definition for class "graph" in method for 'coerce' with signature '"graph","Matrix"': no definition for class "graph" in method for 'coerce' with signature '"graphNEL","CsparseMatrix"': no definition for class "graphNEL" in method for 'coerce' with signature '"graphNEL","TsparseMatrix"': no definition for class "graphNEL" in method for 'coerce' with signature '"sparseMatrix","graph"': no definition for class "graph" in method for 'coerce' with signature '"sparseMatrix","graphNEL"': no definition for class "graphNEL" in method for 'coerce' with signature '"TsparseMatrix","graphNEL"': no definition for class "graphNEL" Creating a generic function for 'qr.R' from package 'base' in package 'Matrix' Creating a generic function for 'qr.Q' from package 'base' in package 'Matrix' Creating a generic function for 'qr.qy' from package 'base' in package 'Matrix' Creating a generic function for 'qr.qty' from package 'base' in package 'Matrix' Creating a generic function for 'qr.coef' from package 'base' in package 'Matrix' Creating a generic function for 'qr.resid' from package 'base' in package 'Matrix' Creating a generic function for 'qr.fitted' from package 'base' in package 'Matrix' Creating a generic function for 'toeplitz' from package 'stats' in package 'Matrix' ** help *** installing help indices ** building package indices Loading required package: Matrix ** installing vignettes ** testing if installed package can be loaded * DONE (Matrix) --- mgcv.ts --- --- survival.ts --- begin installing recommended package survival --- mgcv.ts --- begin installing recommended package mgcv --- survival.ts --- * installing *source* package 'survival' ... ** package 'survival' successfully unpacked and MD5 sums checked ** libs --- agexact.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c agexact.c -o agexact.o --- agfit4.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c agfit4.c -o agfit4.o --- agfit5.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c agfit5.c -o agfit5.o --- agmart.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c agmart.c -o agmart.o --- agmart2.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c agmart2.c -o agmart2.o --- agmart3.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c agmart3.c -o agmart3.o --- agscore.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c agscore.c -o agscore.o --- agsurv3.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c agsurv3.c -o agsurv3.o --- agsurv4.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c agsurv4.c -o agsurv4.o --- agsurv5.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c agsurv5.c -o agsurv5.o --- chinv2.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c chinv2.c -o chinv2.o --- chinv3.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c chinv3.c -o chinv3.o --- cholesky2.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c cholesky2.c -o cholesky2.o --- cholesky3.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c cholesky3.c -o cholesky3.o --- chsolve2.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c chsolve2.c -o chsolve2.o --- chsolve3.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c chsolve3.c -o chsolve3.o --- concordance1.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c concordance1.c -o concordance1.o --- cox_Rcallback.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c cox_Rcallback.c -o cox_Rcallback.o --- coxcount1.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c coxcount1.c -o coxcount1.o --- coxdetail.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c coxdetail.c -o coxdetail.o --- coxexact.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c coxexact.c -o coxexact.o --- coxfit5.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c coxfit5.c -o coxfit5.o --- coxfit6.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c coxfit6.c -o coxfit6.o --- coxmart.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c coxmart.c -o coxmart.o --- coxmart2.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c coxmart2.c -o coxmart2.o --- coxph_wtest.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c coxph_wtest.c -o coxph_wtest.o --- coxsafe.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c coxsafe.c -o coxsafe.o --- coxscho.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c coxscho.c -o coxscho.o --- coxscore.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c coxscore.c -o coxscore.o --- dmatrix.o --- --- doloop.o --- --- dmatrix.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c dmatrix.c -o dmatrix.o --- doloop.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c doloop.c -o doloop.o --- finegray.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c finegray.c -o finegray.o --- init.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c init.c -o init.o --- pyears1.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pyears1.c -o pyears1.o --- pyears2.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pyears2.c -o pyears2.o --- pyears3b.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pyears3b.c -o pyears3b.o --- pystep.o --- --- survConcordance.o --- --- pystep.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c pystep.c -o pystep.o --- survConcordance.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c survConcordance.c -o survConcordance.o --- survdiff2.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c survdiff2.c -o survdiff2.o --- survfit4.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c survfit4.c -o survfit4.o --- survfitci.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c survfitci.c -o survfitci.o --- survpenal.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c survpenal.c -o survpenal.o --- survreg6.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c survreg6.c -o survreg6.o --- survreg7.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c survreg7.c -o survreg7.o --- survregc1.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c survregc1.c -o survregc1.o --- survregc2.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c survregc2.c -o survregc2.o --- survsplit.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c survsplit.c -o survsplit.o --- tmerge.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c tmerge.c -o tmerge.o --- survival.so --- gcc6 -shared -L/wrkdirs/math/R/R-3.3.2/lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o survival.so agexact.o agfit4.o agfit5.o agmart.o agmart2.o agmart3.o agscore.o agsurv3.o agsurv4.o agsurv5.o chinv2.o chinv3.o cholesky2.o cholesky3.o chsolve2.o chsolve3.o concordance1.o cox_Rcallback.o coxcount1.o coxdetail.o coxexact.o coxfit5.o coxfit6.o coxmart.o coxmart2.o coxph_wtest.o coxsafe.o coxscho.o coxscore.o dmatrix.o doloop.o finegray.o init.o pyears1.o pyears2.o pyears3b.o pystep.o survConcordance.o survdiff2.o survfit4.o survfitci.o survpenal.o survreg6.o survreg7.o survregc1.o survregc2.o survsplit.o tmerge.o -L/wrkdirs/math/R/R-3.3.2/lib -lR installing to /wrkdirs/math/R/R-3.3.2/library/survival/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (survival) --- boot.ts --- begin installing recommended package boot * installing *source* package 'boot' ... ** package 'boot' successfully unpacked and MD5 sums checked ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (boot) --- mgcv.ts --- * installing *source* package 'mgcv' ... ** package 'mgcv' successfully unpacked and MD5 sums checked ** libs --- coxph.o --- --- discrete.o --- --- gdi.o --- --- init.o --- --- coxph.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c coxph.c -o coxph.o --- gdi.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c gdi.c -o gdi.o --- init.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c init.c -o init.o --- discrete.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c discrete.c -o discrete.o --- magic.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c magic.c -o magic.o --- mat.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c mat.c -o mat.o --- matrix.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c matrix.c -o matrix.o --- mgcv.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c mgcv.c -o mgcv.o --- misc.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c misc.c -o misc.o --- mvn.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c mvn.c -o mvn.o --- qp.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c qp.c -o qp.o --- soap.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c soap.c -o soap.o --- sparse-smooth.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c sparse-smooth.c -o sparse-smooth.o --- tprs.o --- gcc6 -I/wrkdirs/math/R/R-3.3.2/include -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -c tprs.c -o tprs.o --- mgcv.so --- gcc6 -shared -L/wrkdirs/math/R/R-3.3.2/lib -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -o mgcv.so coxph.o discrete.o gdi.o init.o magic.o mat.o matrix.o mgcv.o misc.o mvn.o qp.o soap.o sparse-smooth.o tprs.o -L/wrkdirs/math/R/R-3.3.2/lib -lRlapack -L/wrkdirs/math/R/R-3.3.2/lib -lRblas -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.7/5.4.0 -lgfortran -lm -lquadmath -L/wrkdirs/math/R/R-3.3.2/lib -lR installing to /wrkdirs/math/R/R-3.3.2/library/mgcv/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (mgcv) --- stamp-recommended --- --- vignettes --- --- vignettes-lattice --- 'pdflatex' is needed to make vignettes but is missing on your system. =========================================================================== =================================================== ===> R-3.3.2_7 depends on executable: gfortran5 - found ===> R-3.3.2_7 depends on package: ghostscript9-agpl-base>=9.16_2 - found ===> R-3.3.2_7 depends on executable: gcc6 - found ===> R-3.3.2_7 depends on file: /usr/local/libdata/pkgconfig/ice.pc - found ===> R-3.3.2_7 depends on file: /usr/local/libdata/pkgconfig/sm.pc - found ===> R-3.3.2_7 depends on file: /usr/local/libdata/pkgconfig/x11.pc - found ===> R-3.3.2_7 depends on file: /usr/local/libdata/pkgconfig/xext.pc - found ===> R-3.3.2_7 depends on file: /usr/local/libdata/pkgconfig/xmu.pc - found ===> R-3.3.2_7 depends on file: /usr/local/libdata/pkgconfig/xscrnsaver.pc - found ===> R-3.3.2_7 depends on file: /usr/local/libdata/pkgconfig/xt.pc - found ===> R-3.3.2_7 depends on executable: indexinfo - found =========================================================================== =================================================== ===> Staging for R-3.3.2_7 ===> Generating temporary packing list mkdir /wrkdirs/math/R/stage/usr/local/lib/R installing doc ... mkdir /wrkdirs/math/R/stage/usr/local/share/doc/R installing doc/html ... mkdir /wrkdirs/math/R/stage/usr/local/share/doc/R/html installing doc/manual ... mkdir /wrkdirs/math/R/stage/usr/local/share/doc/R/manual mkdir /wrkdirs/math/R/stage/usr/local/share/doc/R/manual/images mkdir /wrkdirs/math/R/stage/usr/local/lib/R/etc installing etc ... installing share ... mkdir /wrkdirs/math/R/stage/usr/local/lib/R/share mkdir /wrkdirs/math/R/stage/usr/local/lib/R/share/R mkdir /wrkdirs/math/R/stage/usr/local/lib/R/share/dictionaries mkdir /wrkdirs/math/R/stage/usr/local/lib/R/share/encodings mkdir /wrkdirs/math/R/stage/usr/local/lib/R/share/java mkdir /wrkdirs/math/R/stage/usr/local/lib/R/share/licenses mkdir /wrkdirs/math/R/stage/usr/local/lib/R/share/make mkdir /wrkdirs/math/R/stage/usr/local/lib/R/share/Rd mkdir /wrkdirs/math/R/stage/usr/local/lib/R/share/Rd/macros mkdir /wrkdirs/math/R/stage/usr/local/lib/R/share/sh mkdir /wrkdirs/math/R/stage/usr/local/lib/R/share/texmf mkdir /wrkdirs/math/R/stage/usr/local/lib/R/share/texmf/bibtex mkdir /wrkdirs/math/R/stage/usr/local/lib/R/share/texmf/bibtex/bib mkdir /wrkdirs/math/R/stage/usr/local/lib/R/share/texmf/bibtex/bst mkdir /wrkdirs/math/R/stage/usr/local/lib/R/share/texmf/tex mkdir /wrkdirs/math/R/stage/usr/local/lib/R/share/texmf/tex/latex mkdir /wrkdirs/math/R/stage/usr/local/lib/R/bin /usr/bin/make INSTALL_PROGRAM="install -s -m 555 -s" install mkdir /wrkdirs/math/R/stage/usr/local/lib/R/include mkdir /wrkdirs/math/R/stage/usr/local/lib/R/include/R_ext mkdir /wrkdirs/math/R/stage/usr/local/lib/R/lib gcc6 -I. -I../../src/include -I../../src/include -I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -pipe -DLIBICONV_PLUG -O2 -Wl,-rpath=/usr/local/lib/gcc6 -isystem /usr/local/include -fno-strict-aliasing -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -DR_HOME='"/usr/local/lib/R"' -o Rscript ./Rscript.c mkdir /wrkdirs/math/R/stage/usr/local/lib/R/bin/exec mkdir /wrkdirs/math/R/stage/usr/local/lib/R/modules mkdir /wrkdirs/math/R/stage/usr/local/lib/R/library installing packages ... building HTML index ... /usr/local/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-FAQ.texi /usr/local/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-admin.texi /usr/local/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-data.texi /usr/local/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-exts.texi /usr/local/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-intro.texi /usr/local/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-ints.texi /usr/local/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-lang.texi install -m 0644 "./dir" "/wrkdirs/math/R/stage/usr/local/info" installing R info pages ... updating '/usr/local/info/dir' ... ====> Compressing man pages (compress-man) =========================================================================== =================================================== ===> Building package for R-3.3.2_7 file sizes/checksums [1485]: .......... done packing files [1485]: .......... done packing directories [0]: . done =========================================================================== => Cleaning up wrkdir ===> Cleaning for R-3.3.2_7 build of math/R ended at Sun Mar 12 14:10:23 PDT 2017 build time: 00:18:45