=> Building science/getdp build started at Sun Mar 12 13:28:01 PDT 2017 port directory: /usr/ports/science/getdp building for: DragonFly pkgbox64.dragonflybsd.org 4.7-DEVELOPMENT DragonFly v4.7.0.1380.gb4315f-DEVELOPMENT #0: Fri Mar 3 17:20:21 PST 2017 root@pkgbox64.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 maintained by: stephen@FreeBSD.org ident warning: no id keywords in /build/boomdata/data/.m/Release48-default/ref/../10//usr/ports/science/getdp/Makefile Makefile ident: Poudriere version: 3.1-pre Host OSVERSION: 400713 Jail OSVERSION: 400713 ---Begin Environment--- STATUS=1 SAVED_TERM=screen MASTERMNT=/build/boomdata/data/.m/Release48-default/ref PATH=/usr/local/libexec/poudriere:/sbin:/bin:/usr/sbin:/usr/bin:/usr/pkg/bin:/usr/pkg/sbin:/usr/games:/usr/local/sbin:/usr/local/bin:/usr/pkg/xorg/bin:/usr/X11R6/bin:/root/bin:/sbin:/usr/sbin POUDRIERE_BUILD_TYPE=bulk PKGNAME=getdp-2.8.0_1 OLDPWD=/root/boom PWD=/build/boomdata/data/.m/Release48-default/ref/.p/pool MASTERNAME=Release48-default TERM=cons25 USER=root HOME=/root POUDRIERE_VERSION=3.1-pre LOCALBASE=/usr/local PACKAGE_BUILDING=yes ---End Environment--- ---Begin OPTIONS List--- ===> The following configuration options are available for getdp-2.8.0_1: DOCS=on: Build and/or install documentation EXAMPLES=on: Build and/or install examples ===> Use 'make config' to modify these settings ---End OPTIONS List--- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran5" FC="gfortran5" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc5" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc5" XDG_DATA_HOME=/wrkdirs/science/getdp XDG_CONFIG_HOME=/wrkdirs/science/getdp HOME=/wrkdirs/science/getdp TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc50 --End CONFIGURE_ENV-- --MAKE_ENV-- F77="gfortran5" FC="gfortran5" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc5" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc5" XDG_DATA_HOME=/wrkdirs/science/getdp XDG_CONFIG_HOME=/wrkdirs/science/getdp HOME=/wrkdirs/science/getdp TMPDIR="/tmp" NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc50 ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin" LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 444" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- CMAKE_BUILD_TYPE="release" OSREL=4.7 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local PORTDOCS="" PORTEXAMPLES="" LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/getdp" EXAMPLESDIR="share/examples/getdp" DATADIR="share/getdp" WWWDIR="www/getdp" ETCDIR="etc/getdp" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/getdp DOCSDIR=/usr/local/share/doc/getdp EXAMPLESDIR=/usr/local/share/examples/getdp WWWDIR=/usr/local/www/getdp ETCDIR=/usr/local/etc/getdp --End SUB_LIST-- ---Begin make.conf--- NO_BACKUP=yes USE_PACKAGE_DEPENDS=yes PKG_CREATE_VERBOSE=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORT_DBDIR=/options PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles MAKE_JOBS_NUMBER=5 ---End make.conf--- =================================================== ===> License GPLv2 accepted by the user =========================================================================== =================================================== ===> getdp-2.8.0_1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.9.4_1.txz Installing pkg-1.9.4_1... Extracting pkg-1.9.4_1: .......... done ===> getdp-2.8.0_1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of getdp-2.8.0_1 =========================================================================== =================================================== =========================================================================== =================================================== ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by getdp-2.8.0_1 for building =========================================================================== =================================================== ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by getdp-2.8.0_1 for building => SHA256 Checksum OK for getdp-2.8.0-source.tgz. =========================================================================== =================================================== =========================================================================== =================================================== ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by getdp-2.8.0_1 for building ===> Extracting for getdp-2.8.0_1 => SHA256 Checksum OK for getdp-2.8.0-source.tgz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for getdp-2.8.0_1 ===> Applying ports patches for getdp-2.8.0_1 =========================================================================== =================================================== ===> getdp-2.8.0_1 depends on executable: gfortran5 - not found ===> Installing existing package /packages/All/gcc5-5.4.0.txz Installing gcc5-5.4.0... `-- Installing indexinfo-0.2.6... `-- Extracting indexinfo-0.2.6: .... done `-- Installing mpc-1.0.3... | `-- Installing gmp-5.1.3_3... | `-- Extracting gmp-5.1.3_3: .......... done | `-- Installing mpfr-3.1.5_1... | `-- Extracting mpfr-3.1.5_1: .......... done `-- Extracting mpc-1.0.3: ...... done `-- Installing binutils-2.27_5,1... | `-- Installing gettext-runtime-0.19.8.1_1... | `-- Extracting gettext-runtime-0.19.8.1_1: .......... done `-- Extracting binutils-2.27_5,1: .......... done Extracting gcc5-5.4.0: .......... done Message from gcc5-5.4.0: To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc5 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===> getdp-2.8.0_1 depends on executable: gfortran5 - found ===> Returning to build of getdp-2.8.0_1 ===> getdp-2.8.0_1 depends on file: /usr/local/bin/cmake - not found ===> Installing existing package /packages/All/cmake-3.7.2.txz Installing cmake-3.7.2... `-- Installing expat-2.2.0_1... `-- Extracting expat-2.2.0_1: .......... done `-- Installing libuv-1.11.0... `-- Extracting libuv-1.11.0: .......... done `-- Installing jsoncpp-1.8.0_1... `-- Extracting jsoncpp-1.8.0_1: .......... done `-- Installing cmake-modules-3.7.2... `-- Extracting cmake-modules-3.7.2: .......... done `-- Installing curl-7.52.1_1... | `-- Installing ca_root_nss-3.28.1... | `-- Extracting ca_root_nss-3.28.1: ........ done | `-- Installing krb5-1.14.4_1... | | `-- Installing libressl-2.4.5... | | `-- Extracting libressl-2.4.5: .......... done | | `-- Installing pkgconf-1.2.1_1... | | `-- Extracting pkgconf-1.2.1_1: .......... done | `-- Extracting krb5-1.14.4_1: .......... done | `-- Installing libnghttp2-1.19.0... | `-- Extracting libnghttp2-1.19.0: .......... done `-- Extracting curl-7.52.1_1: .......... done `-- Installing libarchive-3.2.2,1... | `-- Installing liblz4-1.7.5,1... | `-- Extracting liblz4-1.7.5,1: .......... done | `-- Installing lzo2-2.09... | `-- Extracting lzo2-2.09: .......... done `-- Extracting libarchive-3.2.2,1: .......... done `-- Installing ncurses-6.0_3... `-- Extracting ncurses-6.0_3: .......... done Extracting cmake-3.7.2: .......... done Message from ca_root_nss-3.28.1: ********************************* WARNING ********************************* FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. *********************************** NOTE ********************************** This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem *************************************************************************** Message from ncurses-6.0_3: ===> NOTICE: The ncurses port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> getdp-2.8.0_1 depends on file: /usr/local/bin/cmake - found ===> Returning to build of getdp-2.8.0_1 ===> getdp-2.8.0_1 depends on file: /usr/local/bin/as - found =========================================================================== =================================================== ===> getdp-2.8.0_1 depends on shared library: libgsl.so - not found ===> Installing existing package /packages/All/gsl-1.16_2.txz Installing gsl-1.16_2... Extracting gsl-1.16_2: .......... done Message from gsl-1.16_2: ===> NOTICE: The gsl port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> getdp-2.8.0_1 depends on shared library: libgsl.so - found (/usr/local/lib/libgsl.so) ===> Returning to build of getdp-2.8.0_1 ===> getdp-2.8.0_1 depends on shared library: liblapack.so - not found ===> Installing existing package /packages/All/lapack-3.5.0_1.txz Installing lapack-3.5.0_1... `-- Installing blas-3.5.0_3... `-- Extracting blas-3.5.0_3: ....... done Extracting lapack-3.5.0_1: .......... done ===> getdp-2.8.0_1 depends on shared library: liblapack.so - found (/usr/local/lib/liblapack.so) ===> Returning to build of getdp-2.8.0_1 =========================================================================== =================================================== ===> Configuring for getdp-2.8.0_1 ===> Performing in-source build /bin/mkdir -p /wrkdirs/science/getdp/getdp-2.8.0-source -- The CXX compiler identification is GNU 5.4.1 -- The C compiler identification is GNU 5.4.1 -- The Fortran compiler identification is GNU 5.4.0 -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working Fortran compiler: /usr/local/bin/gfortran5 -- Check for working Fortran compiler: /usr/local/bin/gfortran5 -- works -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Checking whether /usr/local/bin/gfortran5 supports Fortran 90 -- Checking whether /usr/local/bin/gfortran5 supports Fortran 90 -- yes -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of void* -- Check size of void* - done -- Found 64Bit -- Looking for Fortran sgemm -- Looking for Fortran sgemm - found -- Looking for pthread.h -- Looking for pthread.h - found -- Found Threads: TRUE -- A library with BLAS API found. -- Found Blas -- A library with BLAS API found. -- Looking for Fortran cheev -- Looking for Fortran cheev - found -- A library with LAPACK API found. -- Found Lapack -- Found Legacy -- Found Sparskit -- System ARPACK not found: using contrib/Arpack instead -- Found Arpack -- Found Gsl -- Could NOT find PythonLibs (missing: PYTHON_LIBRARIES PYTHON_INCLUDE_DIRS) -- Looking for vsnprintf -- Looking for vsnprintf - found -- Looking for sys/socket.h -- Looking for sys/socket.h - found -- Check size of socklen_t -- Check size of socklen_t - done -- Check size of intptr_t -- Check size of intptr_t - done -- Performing Test NOOPT -- Performing Test NOOPT - Success -- Performing Test WALL -- Performing Test WALL - Success -- Performing Test NOWARN -- Performing Test NOWARN - Success -- Will test GetDP stand-alone -- -- GetDP 2.8.0 has been configured for DragonFly: -- -- * Build options: 64Bit Arpack Blas Gsl Lapack Legacy Sparskit -- * Build type: Release -- * C compiler: /usr/bin/cc -- * C++ compiler: /usr/bin/c++ -- * Fortran compiler: /usr/local/bin/gfortran5 -- * Install prefix: /usr/local -- -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_CXX_FLAGS_DEBUG CMAKE_C_FLAGS_DEBUG CMAKE_C_FLAGS_RELEASE CMAKE_MODULE_LINKER_FLAGS CMAKE_SHARED_LINKER_FLAGS -- Build files have been written to: /wrkdirs/science/getdp/getdp-2.8.0-source =========================================================================== =================================================== ===> Building for getdp-2.8.0_1 /usr/local/bin/cmake -H/wrkdirs/science/getdp/getdp-2.8.0-source -B/wrkdirs/science/getdp/getdp-2.8.0-source --check-build-system CMakeFiles/Makefile.cmake 0 /usr/local/bin/cmake -E cmake_progress_start /wrkdirs/science/getdp/getdp-2.8.0-source/CMakeFiles /wrkdirs/science/getdp/getdp-2.8.0-source/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all --- CMakeFiles/getdp.dir/all --- /usr/bin/make -f CMakeFiles/getdp.dir/build.make CMakeFiles/getdp.dir/depend --- CMakeFiles/getdp.dir/depend --- cd /wrkdirs/science/getdp/getdp-2.8.0-source && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/science/getdp/getdp-2.8.0-source /wrkdirs/science/getdp/getdp-2.8.0-source /wrkdirs/science/getdp/getdp-2.8.0-source /wrkdirs/science/getdp/getdp-2.8.0-source /wrkdirs/science/getdp/getdp-2.8.0-source/CMakeFiles/getdp.dir/DependInfo.cmake Scanning dependencies of target getdp /usr/bin/make -f CMakeFiles/getdp.dir/build.make CMakeFiles/getdp.dir/requires /usr/bin/make -f CMakeFiles/getdp.dir/build.make CMakeFiles/getdp.dir/build --- CMakeFiles/getdp.dir/Main/Main.cpp.o --- --- CMakeFiles/getdp.dir/Common/ListUtils.cpp.o --- --- CMakeFiles/getdp.dir/Common/TreeUtils.cpp.o --- --- CMakeFiles/getdp.dir/Common/avl.cpp.o --- --- CMakeFiles/getdp.dir/Common/MallocUtils.cpp.o --- --- CMakeFiles/getdp.dir/Common/TreeUtils.cpp.o --- [ 1%] Building CXX object CMakeFiles/getdp.dir/Common/TreeUtils.cpp.o /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common -I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface -I/wrkdirs/science/getdp/getdp-2.8.0-source/Legacy -I/wrkdirs/science/getdp/getdp-2.8.0-source/Numeric -I/usr/local/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -Wall -o CMakeFiles/getdp.dir/Common/TreeUtils.cpp.o -c /wrkdirs/science/getdp/getdp-2.8.0-source/Common/TreeUtils.cpp --- 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-I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface -I/wrkdirs/science/getdp/getdp-2.8.0-source/Legacy -I/wrkdirs/science/getdp/getdp-2.8.0-source/Numeric -I/usr/local/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -Wall -o CMakeFiles/getdp.dir/Main/Main.cpp.o -c /wrkdirs/science/getdp/getdp-2.8.0-source/Main/Main.cpp --- CMakeFiles/getdp.dir/Common/avl.cpp.o --- /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common -I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface -I/wrkdirs/science/getdp/getdp-2.8.0-source/Legacy -I/wrkdirs/science/getdp/getdp-2.8.0-source/Numeric -I/usr/local/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -Wall -o CMakeFiles/getdp.dir/Common/avl.cpp.o -c /wrkdirs/science/getdp/getdp-2.8.0-source/Common/avl.cpp --- CMakeFiles/getdp.dir/Common/ListUtils.cpp.o --- [ 2%] Building CXX object CMakeFiles/getdp.dir/Common/ListUtils.cpp.o /usr/bin/c++ 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CMakeFiles/getdp.dir/Common/Message.cpp.o -c /wrkdirs/science/getdp/getdp-2.8.0-source/Common/Message.cpp --- CMakeFiles/getdp.dir/Common/OS.cpp.o --- [ 3%] Building CXX object CMakeFiles/getdp.dir/Common/OS.cpp.o /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common -I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface -I/wrkdirs/science/getdp/getdp-2.8.0-source/Legacy -I/wrkdirs/science/getdp/getdp-2.8.0-source/Numeric -I/usr/local/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -Wall -o CMakeFiles/getdp.dir/Common/OS.cpp.o -c /wrkdirs/science/getdp/getdp-2.8.0-source/Common/OS.cpp --- CMakeFiles/getdp.dir/Interface/ProData.cpp.o --- [ 3%] Building CXX object CMakeFiles/getdp.dir/Interface/ProData.cpp.o /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common -I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface 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-pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -Wall -o CMakeFiles/getdp.dir/Interface/ProParser.tab.cpp.o -c /wrkdirs/science/getdp/getdp-2.8.0-source/Interface/ProParser.tab.cpp --- CMakeFiles/getdp.dir/Interface/ProParser.yy.cpp.o --- ProParser.yy.cpp: In function 'yy_buffer_state* getdp_yy_scan_bytes(const char*, yy_size_t)': ProParser.yy.cpp:4776:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] --- CMakeFiles/getdp.dir/Interface/MacroManager.cpp.o --- [ 5%] Building CXX object CMakeFiles/getdp.dir/Interface/MacroManager.cpp.o /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common -I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface -I/wrkdirs/science/getdp/getdp-2.8.0-source/Legacy -I/wrkdirs/science/getdp/getdp-2.8.0-source/Numeric -I/usr/local/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -Wall -o CMakeFiles/getdp.dir/Interface/MacroManager.cpp.o -c /wrkdirs/science/getdp/getdp-2.8.0-source/Interface/MacroManager.cpp --- CMakeFiles/getdp.dir/Numeric/NumericUtils.cpp.o --- [ 6%] Building CXX object CMakeFiles/getdp.dir/Numeric/NumericUtils.cpp.o /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common -I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface -I/wrkdirs/science/getdp/getdp-2.8.0-source/Legacy -I/wrkdirs/science/getdp/getdp-2.8.0-source/Numeric -I/usr/local/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -Wall -o CMakeFiles/getdp.dir/Numeric/NumericUtils.cpp.o -c /wrkdirs/science/getdp/getdp-2.8.0-source/Numeric/NumericUtils.cpp --- CMakeFiles/getdp.dir/Numeric/Adapt.cpp.o --- [ 6%] Building CXX object CMakeFiles/getdp.dir/Numeric/Adapt.cpp.o /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common 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CMakeFiles/getdp.dir/Legacy/F_BiotSavart.cpp.o -c /wrkdirs/science/getdp/getdp-2.8.0-source/Legacy/F_BiotSavart.cpp --- CMakeFiles/getdp.dir/Legacy/F_Coord.cpp.o --- [ 10%] Building CXX object CMakeFiles/getdp.dir/Legacy/F_Coord.cpp.o /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common -I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface -I/wrkdirs/science/getdp/getdp-2.8.0-source/Legacy -I/wrkdirs/science/getdp/getdp-2.8.0-source/Numeric -I/usr/local/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -Wall -o CMakeFiles/getdp.dir/Legacy/F_Coord.cpp.o -c /wrkdirs/science/getdp/getdp-2.8.0-source/Legacy/F_Coord.cpp --- CMakeFiles/getdp.dir/Legacy/F_ExtMath.cpp.o --- [ 10%] Building CXX object CMakeFiles/getdp.dir/Legacy/F_ExtMath.cpp.o /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common 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Vector_h_Vinch_K(int, int, double*, double*, double, double*, double*, double*, double*, double*)': /wrkdirs/science/getdp/getdp-2.8.0-source/Legacy/F_Hysteresis.cpp:1284:38: warning: variable 'bprev' set but not used [-Wunused-but-set-variable] double tempbc[3], tempJk_all[3*N], bprev[3]; ^ --- CMakeFiles/getdp.dir/Legacy/F_Misc.cpp.o --- [ 13%] Building CXX object CMakeFiles/getdp.dir/Legacy/F_Misc.cpp.o /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common -I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface -I/wrkdirs/science/getdp/getdp-2.8.0-source/Legacy -I/wrkdirs/science/getdp/getdp-2.8.0-source/Numeric -I/usr/local/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -Wall -o CMakeFiles/getdp.dir/Legacy/F_Misc.cpp.o -c /wrkdirs/science/getdp/getdp-2.8.0-source/Legacy/F_Misc.cpp --- CMakeFiles/getdp.dir/Legacy/F_MultiHar.cpp.o --- [ 13%] Building CXX object 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CMakeFiles/getdp.dir/Legacy/F_Python.cpp.o --- [ 16%] Building CXX object CMakeFiles/getdp.dir/Legacy/F_Python.cpp.o /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common -I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface -I/wrkdirs/science/getdp/getdp-2.8.0-source/Legacy -I/wrkdirs/science/getdp/getdp-2.8.0-source/Numeric -I/usr/local/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -Wall -o CMakeFiles/getdp.dir/Legacy/F_Python.cpp.o -c /wrkdirs/science/getdp/getdp-2.8.0-source/Legacy/F_Python.cpp --- CMakeFiles/getdp.dir/Legacy/BF_Node.cpp.o --- [ 16%] Building CXX object CMakeFiles/getdp.dir/Legacy/BF_Node.cpp.o /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common -I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface -I/wrkdirs/science/getdp/getdp-2.8.0-source/Legacy -I/wrkdirs/science/getdp/getdp-2.8.0-source/Numeric 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CMakeFiles/getdp.dir/Legacy/BF_Node_3.cpp.o -c /wrkdirs/science/getdp/getdp-2.8.0-source/Legacy/BF_Node_3.cpp --- CMakeFiles/getdp.dir/Legacy/BF_Edge.cpp.o --- [ 18%] Building CXX object CMakeFiles/getdp.dir/Legacy/BF_Edge.cpp.o /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common -I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface -I/wrkdirs/science/getdp/getdp-2.8.0-source/Legacy -I/wrkdirs/science/getdp/getdp-2.8.0-source/Numeric -I/usr/local/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -Wall -o CMakeFiles/getdp.dir/Legacy/BF_Edge.cpp.o -c /wrkdirs/science/getdp/getdp-2.8.0-source/Legacy/BF_Edge.cpp --- CMakeFiles/getdp.dir/Legacy/BF_Edge_2.cpp.o --- [ 19%] Building CXX object CMakeFiles/getdp.dir/Legacy/BF_Edge_2.cpp.o /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common 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CMakeFiles/getdp.dir/Legacy/Get_ElementSource.cpp.o -c /wrkdirs/science/getdp/getdp-2.8.0-source/Legacy/Get_ElementSource.cpp --- CMakeFiles/getdp.dir/Legacy/ExtendedGroup.cpp.o --- [ 41%] Building CXX object CMakeFiles/getdp.dir/Legacy/ExtendedGroup.cpp.o /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common -I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface -I/wrkdirs/science/getdp/getdp-2.8.0-source/Legacy -I/wrkdirs/science/getdp/getdp-2.8.0-source/Numeric -I/usr/local/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -Wall -o CMakeFiles/getdp.dir/Legacy/ExtendedGroup.cpp.o -c /wrkdirs/science/getdp/getdp-2.8.0-source/Legacy/ExtendedGroup.cpp --- CMakeFiles/getdp.dir/Legacy/Pre_TermOfFemEquation.cpp.o --- [ 42%] Building CXX object CMakeFiles/getdp.dir/Legacy/Pre_TermOfFemEquation.cpp.o /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit 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/wrkdirs/science/getdp/getdp-2.8.0-source/Legacy/Generate_Network.cpp --- CMakeFiles/getdp.dir/Legacy/Cal_GalerkinTermOfFemEquation.cpp.o --- [ 43%] Building CXX object CMakeFiles/getdp.dir/Legacy/Cal_GalerkinTermOfFemEquation.cpp.o /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common -I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface -I/wrkdirs/science/getdp/getdp-2.8.0-source/Legacy -I/wrkdirs/science/getdp/getdp-2.8.0-source/Numeric -I/usr/local/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -Wall -o CMakeFiles/getdp.dir/Legacy/Cal_GalerkinTermOfFemEquation.cpp.o -c /wrkdirs/science/getdp/getdp-2.8.0-source/Legacy/Cal_GalerkinTermOfFemEquation.cpp --- CMakeFiles/getdp.dir/Legacy/Cal_GlobalTermOfFemEquation.cpp.o --- [ 43%] Building CXX object CMakeFiles/getdp.dir/Legacy/Cal_GlobalTermOfFemEquation.cpp.o /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit 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CMakeFiles/getdp.dir/Legacy/Cal_IntegralQuantity.cpp.o -c /wrkdirs/science/getdp/getdp-2.8.0-source/Legacy/Cal_IntegralQuantity.cpp --- CMakeFiles/getdp.dir/Legacy/Cal_AnalyticIntegration.cpp.o --- [ 44%] Building CXX object CMakeFiles/getdp.dir/Legacy/Cal_AnalyticIntegration.cpp.o /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common -I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface -I/wrkdirs/science/getdp/getdp-2.8.0-source/Legacy -I/wrkdirs/science/getdp/getdp-2.8.0-source/Numeric -I/usr/local/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -Wall -o CMakeFiles/getdp.dir/Legacy/Cal_AnalyticIntegration.cpp.o -c /wrkdirs/science/getdp/getdp-2.8.0-source/Legacy/Cal_AnalyticIntegration.cpp --- CMakeFiles/getdp.dir/Legacy/Cal_Quantity.cpp.o --- [ 45%] Building CXX object CMakeFiles/getdp.dir/Legacy/Cal_Quantity.cpp.o /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit 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CMakeFiles/getdp.dir/Legacy/Pos_Formulation.cpp.o --- --- CMakeFiles/getdp.dir/Legacy/Pos_FemInterpolation.cpp.o --- [ 49%] Building CXX object CMakeFiles/getdp.dir/Legacy/Pos_FemInterpolation.cpp.o /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common -I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface -I/wrkdirs/science/getdp/getdp-2.8.0-source/Legacy -I/wrkdirs/science/getdp/getdp-2.8.0-source/Numeric -I/usr/local/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -Wall -o CMakeFiles/getdp.dir/Legacy/Pos_FemInterpolation.cpp.o -c /wrkdirs/science/getdp/getdp-2.8.0-source/Legacy/Pos_FemInterpolation.cpp --- CMakeFiles/getdp.dir/Legacy/Pos_Formulation.cpp.o --- [ 49%] Building CXX object CMakeFiles/getdp.dir/Legacy/Pos_Formulation.cpp.o /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common 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CMakeFiles/getdp.dir/Legacy/Pos_Element.cpp.o --- [ 50%] Building CXX object CMakeFiles/getdp.dir/Legacy/Pos_Element.cpp.o --- CMakeFiles/getdp.dir/Legacy/Pos_Format.cpp.o --- --- CMakeFiles/getdp.dir/Legacy/Pos_Element.cpp.o --- /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common -I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface -I/wrkdirs/science/getdp/getdp-2.8.0-source/Legacy -I/wrkdirs/science/getdp/getdp-2.8.0-source/Numeric -I/usr/local/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -Wall -o CMakeFiles/getdp.dir/Legacy/Pos_Element.cpp.o -c /wrkdirs/science/getdp/getdp-2.8.0-source/Legacy/Pos_Element.cpp --- CMakeFiles/getdp.dir/Legacy/Pos_Format.cpp.o --- [ 51%] Building CXX object CMakeFiles/getdp.dir/Legacy/Pos_Format.cpp.o /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common 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CMakeFiles/getdp.dir/Legacy/Pos_Search.cpp.o --- [ 52%] Building CXX object CMakeFiles/getdp.dir/Legacy/Pos_Search.cpp.o /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common -I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface -I/wrkdirs/science/getdp/getdp-2.8.0-source/Legacy -I/wrkdirs/science/getdp/getdp-2.8.0-source/Numeric -I/usr/local/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -Wall -o CMakeFiles/getdp.dir/Legacy/Pos_Search.cpp.o -c /wrkdirs/science/getdp/getdp-2.8.0-source/Legacy/Pos_Search.cpp --- CMakeFiles/getdp.dir/contrib/Sparskit/Sparskit.cpp.o --- [ 52%] Building CXX object CMakeFiles/getdp.dir/contrib/Sparskit/Sparskit.cpp.o /usr/bin/c++ -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common -I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface -I/wrkdirs/science/getdp/getdp-2.8.0-source/Legacy 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CMakeFiles/getdp.dir/contrib/Sparskit/blassm.f.o /usr/local/bin/gfortran5 -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common -I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface -I/wrkdirs/science/getdp/getdp-2.8.0-source/Legacy -I/wrkdirs/science/getdp/getdp-2.8.0-source/Numeric -I/usr/local/include -O -Wl,-rpath=/usr/local/lib/gcc5 -O3 -DNDEBUG -O3 -w -c /wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit/blassm.f -o CMakeFiles/getdp.dir/contrib/Sparskit/blassm.f.o --- CMakeFiles/getdp.dir/contrib/Sparskit/cmkreord.f.o --- [ 54%] Building Fortran object CMakeFiles/getdp.dir/contrib/Sparskit/cmkreord.f.o /usr/local/bin/gfortran5 -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common -I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface -I/wrkdirs/science/getdp/getdp-2.8.0-source/Legacy -I/wrkdirs/science/getdp/getdp-2.8.0-source/Numeric -I/usr/local/include -O 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CMakeFiles/getdp.dir/contrib/Arpack/sgetv0.f.o --- CMakeFiles/getdp.dir/contrib/Arpack/slaqrb.f.o --- [ 59%] Building Fortran object CMakeFiles/getdp.dir/contrib/Arpack/slaqrb.f.o /usr/local/bin/gfortran5 -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common -I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface -I/wrkdirs/science/getdp/getdp-2.8.0-source/Legacy -I/wrkdirs/science/getdp/getdp-2.8.0-source/Numeric -I/usr/local/include -O -Wl,-rpath=/usr/local/lib/gcc5 -O3 -DNDEBUG -O3 -w -c /wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Arpack/slaqrb.f -o CMakeFiles/getdp.dir/contrib/Arpack/slaqrb.f.o --- CMakeFiles/getdp.dir/contrib/Arpack/sstqrb.f.o --- [ 59%] Building Fortran object CMakeFiles/getdp.dir/contrib/Arpack/sstqrb.f.o /usr/local/bin/gfortran5 -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common -I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface 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CMakeFiles/getdp.dir/contrib/Arpack/snconv.f.o --- CMakeFiles/getdp.dir/contrib/Arpack/sneigh.f.o --- [ 64%] Building Fortran object CMakeFiles/getdp.dir/contrib/Arpack/sneigh.f.o /usr/local/bin/gfortran5 -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common -I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface -I/wrkdirs/science/getdp/getdp-2.8.0-source/Legacy -I/wrkdirs/science/getdp/getdp-2.8.0-source/Numeric -I/usr/local/include -O -Wl,-rpath=/usr/local/lib/gcc5 -O3 -DNDEBUG -O3 -w -c /wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Arpack/sneigh.f -o CMakeFiles/getdp.dir/contrib/Arpack/sneigh.f.o --- CMakeFiles/getdp.dir/contrib/Arpack/sngets.f.o --- --- CMakeFiles/getdp.dir/contrib/Arpack/ssaitr.f.o --- --- CMakeFiles/getdp.dir/contrib/Arpack/sngets.f.o --- [ 65%] Building Fortran object CMakeFiles/getdp.dir/contrib/Arpack/sngets.f.o /usr/local/bin/gfortran5 -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit 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CMakeFiles/getdp.dir/contrib/Arpack/ssaitr.f.o --- CMakeFiles/getdp.dir/contrib/Arpack/ssapps.f.o --- [ 66%] Building Fortran object CMakeFiles/getdp.dir/contrib/Arpack/ssapps.f.o /usr/local/bin/gfortran5 -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common -I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface -I/wrkdirs/science/getdp/getdp-2.8.0-source/Legacy -I/wrkdirs/science/getdp/getdp-2.8.0-source/Numeric -I/usr/local/include -O -Wl,-rpath=/usr/local/lib/gcc5 -O3 -DNDEBUG -O3 -w -c /wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Arpack/ssapps.f -o CMakeFiles/getdp.dir/contrib/Arpack/ssapps.f.o --- CMakeFiles/getdp.dir/contrib/Arpack/ssaup2.f.o --- [ 66%] Building Fortran object CMakeFiles/getdp.dir/contrib/Arpack/ssaup2.f.o /usr/local/bin/gfortran5 -I/wrkdirs/science/getdp/getdp-2.8.0-source/contrib/Sparskit -I/wrkdirs/science/getdp/getdp-2.8.0-source/Common -I/wrkdirs/science/getdp/getdp-2.8.0-source/Interface 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