=> Building biology/cd-hit
build started at Mon Mar 13 03:21:31 PDT 2017
port directory: /usr/ports/biology/cd-hit
building for: DragonFly pkgbox64.dragonflybsd.org 4.7-DEVELOPMENT DragonFly v4.7.0.1380.gb4315f-DEVELOPMENT #0: Fri Mar  3 17:20:21 PST 2017     root@pkgbox64.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC  x86_64
maintained by: bacon4000@gmail.com
ident warning: no id keywords in /build/boomdata/data/.m/Release48-default/ref/../01//usr/ports/biology/cd-hit/Makefile
Makefile ident: 
Poudriere version: 3.1-pre
Host OSVERSION: 400713
Jail OSVERSION: 400713

---Begin Environment---
STATUS=1
SAVED_TERM=screen
MASTERMNT=/build/boomdata/data/.m/Release48-default/ref
PATH=/usr/local/libexec/poudriere:/sbin:/bin:/usr/sbin:/usr/bin:/usr/pkg/bin:/usr/pkg/sbin:/usr/games:/usr/local/sbin:/usr/local/bin:/usr/pkg/xorg/bin:/usr/X11R6/bin:/root/bin:/sbin:/usr/sbin
POUDRIERE_BUILD_TYPE=bulk
PKGNAME=cd-hit-4.6.6
OLDPWD=/root/boom
PWD=/build/boomdata/data/.m/Release48-default/ref/.p/pool
MASTERNAME=Release48-default
TERM=cons25
USER=root
HOME=/root
POUDRIERE_VERSION=3.1-pre
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
---End Environment---

---Begin OPTIONS List---
---End OPTIONS List---

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/biology/cd-hit  XDG_CONFIG_HOME=/wrkdirs/biology/cd-hit  HOME=/wrkdirs/biology/cd-hit TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc50
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/biology/cd-hit  XDG_CONFIG_HOME=/wrkdirs/biology/cd-hit  HOME=/wrkdirs/biology/cd-hit TMPDIR="/tmp" NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc50 PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  NOPROFILE=1  CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing"  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 444"  BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
OSREL=4.7
PREFIX=%D
LOCALBASE=/usr/local
RESETPREFIX=/usr/local
PORTDOCS=""
PORTEXAMPLES=""
LIB32DIR=lib
PROFILE="@comment
"
DOCSDIR="share/doc/cd-hit"
EXAMPLESDIR="share/examples/cd-hit"
DATADIR="share/cd-hit"
WWWDIR="www/cd-hit"
ETCDIR="etc/cd-hit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local
LOCALBASE=/usr/local
DATADIR=/usr/local/share/cd-hit
DOCSDIR=/usr/local/share/doc/cd-hit
EXAMPLESDIR=/usr/local/share/examples/cd-hit
WWWDIR=/usr/local/www/cd-hit
ETCDIR=/usr/local/etc/cd-hit
--End SUB_LIST--

---Begin make.conf---
NO_BACKUP=yes
USE_PACKAGE_DEPENDS=yes
PKG_CREATE_VERBOSE=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORT_DBDIR=/options
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
MAKE_JOBS_NUMBER=5
---End make.conf---
=======================<phase: check-sanity   >============================
===>  License GPLv2 accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   cd-hit-4.6.6 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.9.4_1.txz
Installing pkg-1.9.4_1...
Extracting pkg-1.9.4_1: .......... done
===>   cd-hit-4.6.6 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of cd-hit-4.6.6
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by cd-hit-4.6.6 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by cd-hit-4.6.6 for building
=> SHA256 Checksum OK for weizhongli-cdhit-V4.6.6_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by cd-hit-4.6.6 for building
===>  Extracting for cd-hit-4.6.6
=> SHA256 Checksum OK for weizhongli-cdhit-V4.6.6_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for cd-hit-4.6.6
===========================================================================
=======================<phase: build-depends  >============================
===>   cd-hit-4.6.6 depends on executable: gmake - not found
===>   Installing existing package /packages/All/gmake-4.2.1_1.txz
Installing gmake-4.2.1_1...
`-- Installing indexinfo-0.2.6...
`-- Extracting indexinfo-0.2.6: .... done
`-- Installing gettext-runtime-0.19.8.1_1...
`-- Extracting gettext-runtime-0.19.8.1_1: .......... done
Extracting gmake-4.2.1_1: .......... done
===>   cd-hit-4.6.6 depends on executable: gmake - found
===>   Returning to build of cd-hit-4.6.6
===========================================================================
=======================<phase: lib-depends    >============================
===========================================================================
=======================<phase: configure      >============================
===>  Configuring for cd-hit-4.6.6
===========================================================================
=======================<phase: build          >============================
===>  Building for cd-hit-4.6.6
gmake[1]: Entering directory '/wrkdirs/biology/cd-hit/cdhit-4.6.6'
gmake[1]: Nothing to be done for 'Makefile'.
c++  -fopenmp -O2  -pipe -O2 -fno-strict-aliasing cdhit-common.c++ -c
c++  -fopenmp -O2  -pipe -O2 -fno-strict-aliasing cdhit-utility.c++ -c
c++  -fopenmp -O2  -pipe -O2 -fno-strict-aliasing cdhit.c++ -c
c++  -fopenmp -O2  -pipe -O2 -fno-strict-aliasing cdhit-est.c++ -c
c++  -fopenmp -O2  -pipe -O2 -fno-strict-aliasing cdhit-2d.c++ -c
c++  -fopenmp -O2  -pipe -O2 -fno-strict-aliasing cdhit-est-2d.c++ -c
c++  -fopenmp -O2  -pipe -O2 -fno-strict-aliasing cdhit-div.c++ -c
c++  -fopenmp -O2  -pipe -O2 -fno-strict-aliasing cdhit-454.c++ -c
c++  -fopenmp -O2  -pipe -O2 -fno-strict-aliasing cdhit.o cdhit-common.o cdhit-utility.o  -o cd-hit
c++  -fopenmp -O2  -pipe -O2 -fno-strict-aliasing cdhit-est.o cdhit-common.o cdhit-utility.o  -o cd-hit-est
c++  -fopenmp -O2  -pipe -O2 -fno-strict-aliasing cdhit-2d.o cdhit-common.o cdhit-utility.o  -o cd-hit-2d
c++  -fopenmp -O2  -pipe -O2 -fno-strict-aliasing cdhit-est-2d.o cdhit-common.o cdhit-utility.o  -o cd-hit-est-2d
c++  -fopenmp -O2  -pipe -O2 -fno-strict-aliasing cdhit-div.o cdhit-common.o cdhit-utility.o  -o cd-hit-div
c++  -fopenmp -O2  -pipe -O2 -fno-strict-aliasing cdhit-454.o cdhit-common.o cdhit-utility.o  -o cd-hit-454
gmake[1]: Leaving directory '/wrkdirs/biology/cd-hit/cdhit-4.6.6'
===========================================================================
=======================<phase: run-depends    >============================
===========================================================================
=======================<phase: stage          >============================
===>  Staging for cd-hit-4.6.6
===>   Generating temporary packing list
gmake[1]: Entering directory '/wrkdirs/biology/cd-hit/cdhit-4.6.6'
gmake[1]: Nothing to be done for 'Makefile'.
for prog in cd-hit cd-hit-est cd-hit-2d cd-hit-est-2d cd-hit-div cd-hit-454; do \
	install -m 0755 $prog /wrkdirs/biology/cd-hit/stage/usr/local/bin; \
done
install -m 0755 *.pl /wrkdirs/biology/cd-hit/stage/usr/local/bin;
gmake[1]: Leaving directory '/wrkdirs/biology/cd-hit/cdhit-4.6.6'
====> Compressing man pages (compress-man)
===========================================================================
=======================<phase: package        >============================
===>  Building package for cd-hit-4.6.6
file sizes/checksums    [36]: . done
packing files           [36]: . done
packing directories      [0]: . done
===========================================================================
=> Cleaning up wrkdir
===>  Cleaning for cd-hit-4.6.6
build of biology/cd-hit ended at Mon Mar 13 03:22:00 PDT 2017
build time: 00:00:29