=> Building biology/p5-Bio-MAGETAB build started at Sat Oct 8 15:00:09 PDT 2016 port directory: /usr/ports/biology/p5-Bio-MAGETAB building for: DragonFly pkgbox64.dragonflybsd.org 4.7-DEVELOPMENT DragonFly v4.7.0.78.g7d868-DEVELOPMENT #7: Mon Aug 1 22:25:32 PDT 2016 root@pkgbox64.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 maintained by: perl@FreeBSD.org ident warning: no id keywords in /build/boomdata/data/.m/Release46-default/ref/../05//usr/ports/biology/p5-Bio-MAGETAB/Makefile Makefile ident: Poudriere version: 3.1-pre Host OSVERSION: 400700 Jail OSVERSION: 400600 ---Begin Environment--- STATUS=1 SAVED_TERM=screen MASTERMNT=/build/boomdata/data/.m/Release46-default/ref PATH=/usr/local/libexec/poudriere:/sbin:/bin:/usr/sbin:/usr/bin:/usr/pkg/bin:/usr/pkg/sbin:/usr/games:/usr/local/sbin:/usr/local/bin:/usr/pkg/xorg/bin:/usr/X11R6/bin:/root/bin:/sbin:/usr/sbin POUDRIERE_BUILD_TYPE=bulk PKGNAME=p5-Bio-MAGETAB-1.31_1 OLDPWD=/root/boom PWD=/build/boomdata/data/.m/Release46-default/ref/.p/pool MASTERNAME=Release46-default TERM=cons25 USER=root HOME=/root POUDRIERE_VERSION=3.1-pre LOCALBASE=/usr/local PACKAGE_BUILDING=yes ---End Environment--- ---Begin OPTIONS List--- ---End OPTIONS List--- --CONFIGURE_ARGS-- INSTALLDIRS="site" CC="cc" CCFLAGS="-pipe -O2 -fno-strict-aliasing" PREFIX="/usr/local" INSTALLPRIVLIB="/usr/local/lib" INSTALLARCHLIB="/usr/local/lib" --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl XDG_DATA_HOME=/wrkdirs/biology/p5-Bio-MAGETAB XDG_CONFIG_HOME=/wrkdirs/biology/p5-Bio-MAGETAB HOME=/wrkdirs/biology/p5-Bio-MAGETAB TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc50 PERL_EXTUTILS_AUTOINSTALL="--skipdeps" PERL_MM_USE_DEFAULT="YES" --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/biology/p5-Bio-MAGETAB XDG_CONFIG_HOME=/wrkdirs/biology/p5-Bio-MAGETAB HOME=/wrkdirs/biology/p5-Bio-MAGETAB TMPDIR="/tmp" NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc50 PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS="" LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 444" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- OSREL=4.6 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local PORTDOCS="" PORTEXAMPLES="" LIB32DIR=lib PERL_VERSION=5.20.3 PERL_VER=5.20 PERL5_MAN1=lib/perl5/site_perl/man/man1 PERL5_MAN3=lib/perl5/site_perl/man/man3 SITE_PERL=lib/perl5/site_perl SITE_ARCH=lib/perl5/site_perl/mach/5.20 PROFILE="@comment " DOCSDIR="share/doc/Bio-MAGETAB" EXAMPLESDIR="share/examples/Bio-MAGETAB" DATADIR="share/Bio-MAGETAB" WWWDIR="www/Bio-MAGETAB" ETCDIR="etc/Bio-MAGETAB" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/Bio-MAGETAB DOCSDIR=/usr/local/share/doc/Bio-MAGETAB EXAMPLESDIR=/usr/local/share/examples/Bio-MAGETAB WWWDIR=/usr/local/www/Bio-MAGETAB ETCDIR=/usr/local/etc/Bio-MAGETAB --End SUB_LIST-- ---Begin make.conf--- NO_BACKUP=yes USE_PACKAGE_DEPENDS=yes PKG_CREATE_VERBOSE=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORT_DBDIR=/options PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles MAKE_JOBS_NUMBER=5 ---End make.conf--- =================================================== ===> License GPLv2 accepted by the user =========================================================================== =================================================== ===> p5-Bio-MAGETAB-1.31_1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.8.7_3.txz Installing pkg-1.8.7_3... Extracting pkg-1.8.7_3: .......... done ===> p5-Bio-MAGETAB-1.31_1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of p5-Bio-MAGETAB-1.31_1 =========================================================================== =================================================== =========================================================================== =================================================== ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by p5-Bio-MAGETAB-1.31_1 for building =========================================================================== =================================================== ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by p5-Bio-MAGETAB-1.31_1 for building => SHA256 Checksum OK for Bio-MAGETAB-1.31.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by p5-Bio-MAGETAB-1.31_1 for building ===> Extracting for p5-Bio-MAGETAB-1.31_1 => SHA256 Checksum OK for Bio-MAGETAB-1.31.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for p5-Bio-MAGETAB-1.31_1 =========================================================================== =================================================== ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-Date-Manip>=5.44 - not found ===> Installing existing package /packages/All/p5-Date-Manip-6.53.txz Installing p5-Date-Manip-6.53... `-- Installing perl5-5.20.3_15... `-- Extracting perl5-5.20.3_15: .......... done Extracting p5-Date-Manip-6.53: .......... done Message from perl5-5.20.3_15: The /usr/bin/perl symlink has been removed starting with Perl 5.20. For shebangs, you should either use: #!/usr/local/bin/perl or #!/usr/bin/env perl The first one will only work if you have a /usr/local/bin/perl, the second will work as long as perl is in PATH. ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-Date-Manip>=5.44 - found ===> Returning to build of p5-Bio-MAGETAB-1.31_1 ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-DateTime>=0.43.02 - not found ===> Installing existing package /packages/All/p5-DateTime-1.39.txz Installing p5-DateTime-1.39... `-- Installing p5-namespace-autoclean-0.28... | `-- Installing p5-Sub-Identify-0.12... | `-- Extracting p5-Sub-Identify-0.12: ........ done | `-- Installing p5-B-Hooks-EndOfScope-0.21... | | `-- Installing p5-Module-Implementation-0.09_1... | | `-- Installing p5-Module-Runtime-0.014_1... | | `-- Extracting p5-Module-Runtime-0.014_1: ....... done | | `-- Installing p5-Try-Tiny-0.24... | | `-- Extracting p5-Try-Tiny-0.24: ...... done | | `-- Extracting p5-Module-Implementation-0.09_1: ...... done | | `-- Installing p5-Sub-Exporter-Progressive-0.001011... | | `-- Installing p5-Sub-Exporter-0.987_1... | | | `-- Installing p5-Params-Util-1.07_2... | | | `-- Extracting p5-Params-Util-1.07_2: ........ done | | | `-- Installing p5-Sub-Install-0.928_1... | | | `-- Extracting p5-Sub-Install-0.928_1: ....... done | | | `-- Installing p5-Data-OptList-0.110... | | | `-- Extracting p5-Data-OptList-0.110: ....... done | | `-- Extracting p5-Sub-Exporter-0.987_1: .......... done | | `-- Extracting p5-Sub-Exporter-Progressive-0.001011: ....... done | | `-- Installing p5-Variable-Magic-0.59... | | `-- Extracting p5-Variable-Magic-0.59: ........ done | `-- Extracting p5-B-Hooks-EndOfScope-0.21: .......... done | `-- Installing p5-namespace-clean-0.27... | | `-- Installing p5-Package-Stash-0.37_1... | | `-- Installing p5-Dist-CheckConflicts-0.11_1... | | `-- Extracting p5-Dist-CheckConflicts-0.11_1: ....... done | | `-- Installing p5-Package-Stash-XS-0.28_1... | | `-- Extracting p5-Package-Stash-XS-0.28_1: ........ done | | `-- Extracting p5-Package-Stash-0.37_1: .......... done | `-- Extracting p5-namespace-clean-0.27: ........ done `-- Extracting p5-namespace-autoclean-0.28: ....... done `-- Installing p5-DateTime-TimeZone-2.05,1... | `-- Installing p5-List-AllUtils-0.10... | | `-- Installing p5-List-SomeUtils-0.52... | | `-- Installing p5-List-SomeUtils-XS-0.52... | | `-- Extracting p5-List-SomeUtils-XS-0.52: ....... done | | `-- Installing p5-Exporter-Tiny-0.042_1... | | `-- Extracting p5-Exporter-Tiny-0.042_1: ......... done | | `-- Extracting p5-List-SomeUtils-0.52: ......... done | `-- Extracting p5-List-AllUtils-0.10: ...... done | `-- Installing p5-Class-Singleton-1.5_1... | `-- Extracting p5-Class-Singleton-1.5_1: ....... done | `-- Installing p5-Params-ValidationCompiler-0.13... | | `-- Installing p5-Specio-0.24... | | `-- Installing p5-Role-Tiny-2.000003... | | | `-- Installing p5-Class-Method-Modifiers-2.12... | | | `-- Extracting p5-Class-Method-Modifiers-2.12: ....... done | | `-- Extracting p5-Role-Tiny-2.000003: ......... done | | `-- Installing p5-Eval-Closure-0.14... | | `-- Extracting p5-Eval-Closure-0.14: ....... done | | `-- Installing p5-MRO-Compat-0.12_1... | | | `-- Installing p5-Class-C3-0.32... | | | `-- Installing p5-Algorithm-C3-0.10_1... | | | `-- Extracting p5-Algorithm-C3-0.10_1: ....... done | | | `-- Extracting p5-Class-C3-0.32: ......... done | | `-- Extracting p5-MRO-Compat-0.12_1: ... done | | `-- Installing p5-Devel-StackTrace-2.01... | | `-- Extracting p5-Devel-StackTrace-2.01: ........ done | | `-- Extracting p5-Specio-0.24: .......... done | | `-- Installing p5-Exception-Class-1.40... | | `-- Installing p5-Class-Data-Inheritable-0.08_1... | | `-- Extracting p5-Class-Data-Inheritable-0.08_1: ... done | | `-- Extracting p5-Exception-Class-1.40: ......... done | `-- Extracting p5-Params-ValidationCompiler-0.13: .......... done `-- Extracting p5-DateTime-TimeZone-2.05,1: .......... done `-- Installing p5-DateTime-Locale-1.08... | `-- Installing p5-Scalar-List-Utils-1.45,1... | `-- Extracting p5-Scalar-List-Utils-1.45,1: .......... done `-- Extracting p5-DateTime-Locale-1.08: .......... done `-- Installing p5-Params-Validate-1.24... `-- Extracting p5-Params-Validate-1.24: .......... done Extracting p5-DateTime-1.39: .......... done ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-DateTime>=0.43.02 - found ===> Returning to build of p5-Bio-MAGETAB-1.31_1 ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-DateTime-Format-DateManip>=0.04 - not found ===> Installing existing package /packages/All/p5-DateTime-Format-DateManip-0.04_1.txz Installing p5-DateTime-Format-DateManip-0.04_1... Extracting p5-DateTime-Format-DateManip-0.04_1: ... done ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-DateTime-Format-DateManip>=0.04 - found ===> Returning to build of p5-Bio-MAGETAB-1.31_1 ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-Email-Valid>=0.179 - not found ===> Installing existing package /packages/All/p5-Email-Valid-1.200.txz Installing p5-Email-Valid-1.200... `-- Installing p5-Net-DNS-1.06_2,1... | `-- Installing p5-Digest-HMAC-1.03_1... | `-- Extracting p5-Digest-HMAC-1.03_1: ....... done | `-- Installing p5-IO-Socket-IP-0.37_1... | `-- Extracting p5-IO-Socket-IP-0.37_1: ....... done `-- Extracting p5-Net-DNS-1.06_2,1: .......... done `-- Installing p5-Net-Domain-TLD-1.74... `-- Extracting p5-Net-Domain-TLD-1.74: ... done `-- Installing p5-Mail-Tools-2.14... | `-- Installing p5-TimeDate-2.30_2,1... | `-- Extracting p5-TimeDate-2.30_2,1: .......... done `-- Extracting p5-Mail-Tools-2.14: .......... done Extracting p5-Email-Valid-1.200: ....... done ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-Email-Valid>=0.179 - found ===> Returning to build of p5-Bio-MAGETAB-1.31_1 ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-Moose>=0.43 - not found ===> Installing existing package /packages/All/p5-Moose-2.1806,1.txz Installing p5-Moose-2.1806,1... `-- Installing p5-Sub-Name-0.14,1... `-- Extracting p5-Sub-Name-0.14,1: .... done `-- Installing p5-Devel-OverloadInfo-0.004... `-- Extracting p5-Devel-OverloadInfo-0.004: ....... done `-- Installing p5-Class-Load-0.22... `-- Extracting p5-Class-Load-0.22: ........ done `-- Installing p5-Class-Load-XS-0.09_1... `-- Extracting p5-Class-Load-XS-0.09_1: ....... done `-- Installing p5-Package-DeprecationManager-0.15... `-- Extracting p5-Package-DeprecationManager-0.15: ...... done `-- Installing p5-Module-Runtime-Conflicts-0.003... `-- Extracting p5-Module-Runtime-Conflicts-0.003: ....... done `-- Installing p5-Devel-GlobalDestruction-0.13_1... `-- Extracting p5-Devel-GlobalDestruction-0.13_1: ....... done Extracting p5-Moose-2.1806,1: .......... done Message from p5-Moose-2.1806,1: Note that this release of p5-Moose is incompatible with older versions of the following modules: Catalyst <= 5.80017 Devel::REPL <= 1.003008 Fey::ORM <= 0.23 File::ChangeNotify <= 0.15 KiokuDB <= 0.41 MooseX::Aliases <= 0.07 MooseX::AttributeHelpers <= 0.22 MooseX::AttributeInflate <= 0.02 MooseX::Attribute::Prototype <= 0.10 MooseX::ClassAttribute <= 0.13 MooseX::FollowPBP <= 0.02 MooseX::HasDefaults <= 0.02 MooseX::InstanceTracking <= 0.04 MooseX::LazyRequire <= 0.05 MooseX::MethodAttributes <= 0.22 MooseX::NonMoose <= 0.13 MooseX::Params::Validate <= 0.05 MooseX::Role::Cmd <= 0.06 MooseX::Role::WithOverloading <= 0.07 MooseX::SemiAffordanceAccessor <= 0.05 MooseX::Singleton <= 0.22 MooseX::StrictConstructor <= 0.08 MooseX::Types <= 0.19 MooseX::UndefTolerant <= 0.04 namespace::autoclean <= 0.08 Pod::Elemental <= 0.093280 They will need to be updated. ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-Moose>=0.43 - found ===> Returning to build of p5-Bio-MAGETAB-1.31_1 ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-MooseX-FollowPBP>=0.04 - not found ===> Installing existing package /packages/All/p5-MooseX-FollowPBP-0.05_1.txz Installing p5-MooseX-FollowPBP-0.05_1... Extracting p5-MooseX-FollowPBP-0.05_1: ........ done ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-MooseX-FollowPBP>=0.04 - found ===> Returning to build of p5-Bio-MAGETAB-1.31_1 ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-MooseX-Types>=0.10 - not found ===> Installing existing package /packages/All/p5-MooseX-Types-0.46.txz Installing p5-MooseX-Types-0.46... `-- Installing p5-Sub-Exporter-ForMethods-0.100052... `-- Extracting p5-Sub-Exporter-ForMethods-0.100052: ... done `-- Installing p5-Carp-Clan-6.06... `-- Extracting p5-Carp-Clan-6.06: .... done Extracting p5-MooseX-Types-0.46: .......... done ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-MooseX-Types>=0.10 - found ===> Returning to build of p5-Bio-MAGETAB-1.31_1 ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-Params-Coerce>=0.14 - not found ===> Installing existing package /packages/All/p5-Params-Coerce-0.14_2.txz Installing p5-Params-Coerce-0.14_2... Extracting p5-Params-Coerce-0.14_2: ... done ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-Params-Coerce>=0.14 - found ===> Returning to build of p5-Bio-MAGETAB-1.31_1 ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-Parse-RecDescent>=1.965.001 - not found ===> Installing existing package /packages/All/p5-Parse-RecDescent-1.967.009_2.txz Installing p5-Parse-RecDescent-1.967.009_2... Extracting p5-Parse-RecDescent-1.967.009_2: .......... done ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-Parse-RecDescent>=1.965.001 - found ===> Returning to build of p5-Bio-MAGETAB-1.31_1 ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-Text-CSV_XS>=0.32 - not found ===> Installing existing package /packages/All/p5-Text-CSV_XS-1.18.txz Installing p5-Text-CSV_XS-1.18... Extracting p5-Text-CSV_XS-1.18: ........ done ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-Text-CSV_XS>=0.32 - found ===> Returning to build of p5-Bio-MAGETAB-1.31_1 ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-URI>=1.35 - not found ===> Installing existing package /packages/All/p5-URI-1.71.txz Installing p5-URI-1.71... Extracting p5-URI-1.71: .......... done ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-URI>=1.35 - found ===> Returning to build of p5-Bio-MAGETAB-1.31_1 ===> p5-Bio-MAGETAB-1.31_1 depends on package: perl5>=5.20<5.21 - found =========================================================================== =================================================== =========================================================================== =================================================== ===> Configuring for p5-Bio-MAGETAB-1.31_1 Warning: prerequisite DateTime::Format::Flexible 0.21 not found. Warning: prerequisite Test::Exception 0.26 not found. Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for Bio::MAGETAB Writing MYMETA.yml and MYMETA.json =========================================================================== =================================================== ===> Building for p5-Bio-MAGETAB-1.31_1 --- blib/lib/Bio/.exists --- --- blib/arch/.exists --- --- blib/lib/auto/Bio/MAGETAB/.exists --- --- blib/arch/auto/Bio/MAGETAB/.exists --- --- blib/bin/.exists --- --- blib/script/.exists --- --- blib/man1/.exists --- --- blib/man3/.exists --- --- subdirs --- --- dynamic --- --- pm_to_blib --- --- linkext --- --- blibdirs --- --- blib/script/unload_magetab_namespace.pl --- --- blib/script/fix_ae_magetab.pl --- --- blib/script/read_magetab.pl --- --- blib/script/deploy_magetab_db.pl --- --- blib/script/unload_magetab_namespace.pl --- cp scripts/unload_magetab_namespace.pl blib/script/unload_magetab_namespace.pl --- blib/script/fix_ae_magetab.pl --- cp scripts/fix_ae_magetab.pl blib/script/fix_ae_magetab.pl --- blib/script/read_magetab.pl --- cp scripts/read_magetab.pl blib/script/read_magetab.pl --- blib/script/fix_ae_magetab.pl --- /usr/local/bin/perl5.20.3 "-Iinc" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/fix_ae_magetab.pl --- blib/script/deploy_magetab_db.pl --- cp scripts/deploy_magetab_db.pl blib/script/deploy_magetab_db.pl /usr/local/bin/perl5.20.3 "-Iinc" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/deploy_magetab_db.pl --- blib/script/unload_magetab_namespace.pl --- /usr/local/bin/perl5.20.3 "-Iinc" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/unload_magetab_namespace.pl --- blib/script/read_magetab.pl --- /usr/local/bin/perl5.20.3 "-Iinc" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/read_magetab.pl --- pm_to_blib --- cp lib/Bio/MAGETAB/SDRFRow.pm blib/lib/Bio/MAGETAB/SDRFRow.pm cp lib/Bio/MAGETAB/Normalization.pm blib/lib/Bio/MAGETAB/Normalization.pm cp lib/Bio/MAGETAB/Util/Writer/Tabfile.pm blib/lib/Bio/MAGETAB/Util/Writer/Tabfile.pm cp lib/Bio/MAGETAB/Util/Reader.pm blib/lib/Bio/MAGETAB/Util/Reader.pm cp lib/Bio/MAGETAB/Util/Reader/SDRF.pm blib/lib/Bio/MAGETAB/Util/Reader/SDRF.pm cp lib/Bio/MAGETAB/DataMatrix.pm blib/lib/Bio/MAGETAB/DataMatrix.pm cp lib/Bio/MAGETAB/MatrixColumn.pm blib/lib/Bio/MAGETAB/MatrixColumn.pm cp lib/Bio/MAGETAB/ProtocolApplication.pm blib/lib/Bio/MAGETAB/ProtocolApplication.pm cp lib/Bio/MAGETAB/BaseClass.pm blib/lib/Bio/MAGETAB/BaseClass.pm cp lib/Bio/MAGETAB/Util/Reader/DataMatrix.pm blib/lib/Bio/MAGETAB/Util/Reader/DataMatrix.pm cp lib/Bio/MAGETAB/SDRF.pm blib/lib/Bio/MAGETAB/SDRF.pm cp lib/Bio/MAGETAB/Comment.pm blib/lib/Bio/MAGETAB/Comment.pm cp lib/Bio/MAGETAB/Edge.pm blib/lib/Bio/MAGETAB/Edge.pm cp lib/Bio/MAGETAB/Sample.pm blib/lib/Bio/MAGETAB/Sample.pm cp lib/Bio/MAGETAB/ArrayDesign.pm blib/lib/Bio/MAGETAB/ArrayDesign.pm cp lib/Bio/MAGETAB/Util/DBLoader.pm blib/lib/Bio/MAGETAB/Util/DBLoader.pm cp lib/Bio/MAGETAB/TermSource.pm blib/lib/Bio/MAGETAB/TermSource.pm cp lib/Bio/MAGETAB/Data.pm blib/lib/Bio/MAGETAB/Data.pm cp lib/Bio/MAGETAB/Event.pm blib/lib/Bio/MAGETAB/Event.pm cp lib/Bio/MAGETAB/Factor.pm blib/lib/Bio/MAGETAB/Factor.pm cp lib/Bio/MAGETAB/MatrixRow.pm blib/lib/Bio/MAGETAB/MatrixRow.pm cp lib/Bio/MAGETAB/Node.pm blib/lib/Bio/MAGETAB/Node.pm cp lib/Bio/MAGETAB/Util/Reader/IDF.pm blib/lib/Bio/MAGETAB/Util/Reader/IDF.pm cp lib/Bio/MAGETAB/Util/Persistence.pm blib/lib/Bio/MAGETAB/Util/Persistence.pm cp lib/Bio/MAGETAB/Protocol.pm blib/lib/Bio/MAGETAB/Protocol.pm cp lib/Bio/MAGETAB/Types.pm blib/lib/Bio/MAGETAB/Types.pm cp lib/Bio/MAGETAB/Util/Builder.pm blib/lib/Bio/MAGETAB/Util/Builder.pm cp lib/Bio/MAGETAB/FactorValue.pm blib/lib/Bio/MAGETAB/FactorValue.pm cp lib/Bio/MAGETAB/Util/Writer/ADF.pm blib/lib/Bio/MAGETAB/Util/Writer/ADF.pm cp lib/Bio/MAGETAB/Material.pm blib/lib/Bio/MAGETAB/Material.pm cp lib/Bio/MAGETAB/Util/Writer/GraphViz.pm blib/lib/Bio/MAGETAB/Util/Writer/GraphViz.pm cp lib/Bio/MAGETAB/LabeledExtract.pm blib/lib/Bio/MAGETAB/LabeledExtract.pm cp lib/Bio/MAGETAB/DataFile.pm blib/lib/Bio/MAGETAB/DataFile.pm cp lib/Bio/MAGETAB/Investigation.pm blib/lib/Bio/MAGETAB/Investigation.pm cp lib/Bio/MAGETAB/Reporter.pm blib/lib/Bio/MAGETAB/Reporter.pm cp lib/Bio/MAGETAB/Contact.pm blib/lib/Bio/MAGETAB/Contact.pm cp lib/Bio/MAGETAB/Util/Reader/ADF.pm blib/lib/Bio/MAGETAB/Util/Reader/ADF.pm cp lib/Bio/MAGETAB/DatabaseEntry.pm blib/lib/Bio/MAGETAB/DatabaseEntry.pm cp lib/Bio/MAGETAB/ProtocolParameter.pm blib/lib/Bio/MAGETAB/ProtocolParameter.pm cp lib/Bio/MAGETAB/Util/RewriteAE.pm blib/lib/Bio/MAGETAB/Util/RewriteAE.pm cp lib/Bio/MAGETAB/DataAcquisition.pm blib/lib/Bio/MAGETAB/DataAcquisition.pm cp lib/Bio/MAGETAB/ParameterValue.pm blib/lib/Bio/MAGETAB/ParameterValue.pm cp lib/Bio/MAGETAB/Measurement.pm blib/lib/Bio/MAGETAB/Measurement.pm cp lib/Bio/MAGETAB/CompositeElement.pm blib/lib/Bio/MAGETAB/CompositeElement.pm cp lib/Bio/MAGETAB/Assay.pm blib/lib/Bio/MAGETAB/Assay.pm cp lib/Bio/MAGETAB/Util/Writer/SDRF.pm blib/lib/Bio/MAGETAB/Util/Writer/SDRF.pm cp lib/Bio/MAGETAB/Util/Writer/IDF.pm blib/lib/Bio/MAGETAB/Util/Writer/IDF.pm cp lib/Bio/MAGETAB/Util/Reader/Tabfile.pm blib/lib/Bio/MAGETAB/Util/Reader/Tabfile.pm cp lib/Bio/MAGETAB.pm blib/lib/Bio/MAGETAB.pm cp lib/Bio/MAGETAB/Util/Reader/TagValueFile.pm blib/lib/Bio/MAGETAB/Util/Reader/TagValueFile.pm cp lib/Bio/MAGETAB/Extract.pm blib/lib/Bio/MAGETAB/Extract.pm cp lib/Bio/MAGETAB/Feature.pm blib/lib/Bio/MAGETAB/Feature.pm cp lib/Bio/MAGETAB/ControlledTerm.pm blib/lib/Bio/MAGETAB/ControlledTerm.pm cp lib/Bio/MAGETAB/DesignElement.pm blib/lib/Bio/MAGETAB/DesignElement.pm cp lib/Bio/MAGETAB/Publication.pm blib/lib/Bio/MAGETAB/Publication.pm cp lib/Bio/MAGETAB/Source.pm blib/lib/Bio/MAGETAB/Source.pm cp lib/Bio/MAGETAB/Util/Writer.pm blib/lib/Bio/MAGETAB/Util/Writer.pm --- config --- --- pure_all --- --- pure_all --- --- manifypods --- Manifying blib/man3/Bio::MAGETAB.3 Manifying blib/man3/Bio::MAGETAB::ArrayDesign.3 Manifying blib/man3/Bio::MAGETAB::Assay.3 Manifying blib/man3/Bio::MAGETAB::BaseClass.3 Manifying blib/man3/Bio::MAGETAB::Comment.3 Manifying blib/man3/Bio::MAGETAB::CompositeElement.3 Manifying blib/man3/Bio::MAGETAB::Contact.3 Manifying blib/man3/Bio::MAGETAB::ControlledTerm.3 Manifying blib/man3/Bio::MAGETAB::Data.3 Manifying blib/man3/Bio::MAGETAB::DataAcquisition.3 Manifying blib/man3/Bio::MAGETAB::DataFile.3 Manifying blib/man3/Bio::MAGETAB::DataMatrix.3 Manifying blib/man3/Bio::MAGETAB::DatabaseEntry.3 Manifying blib/man3/Bio::MAGETAB::DesignElement.3 Manifying blib/man3/Bio::MAGETAB::Edge.3 Manifying blib/man3/Bio::MAGETAB::Event.3 Manifying blib/man3/Bio::MAGETAB::Extract.3 Manifying blib/man3/Bio::MAGETAB::Factor.3 Manifying blib/man3/Bio::MAGETAB::FactorValue.3 Manifying blib/man3/Bio::MAGETAB::Feature.3 Manifying blib/man3/Bio::MAGETAB::Investigation.3 Manifying blib/man3/Bio::MAGETAB::LabeledExtract.3 Manifying blib/man3/Bio::MAGETAB::Material.3 Manifying blib/man3/Bio::MAGETAB::MatrixColumn.3 Manifying blib/man3/Bio::MAGETAB::MatrixRow.3 Manifying blib/man3/Bio::MAGETAB::Measurement.3 Manifying blib/man3/Bio::MAGETAB::Node.3 Manifying blib/man3/Bio::MAGETAB::Normalization.3 Manifying blib/man3/Bio::MAGETAB::ParameterValue.3 Manifying blib/man3/Bio::MAGETAB::Protocol.3 Manifying blib/man3/Bio::MAGETAB::ProtocolApplication.3 Manifying blib/man3/Bio::MAGETAB::ProtocolParameter.3 Manifying blib/man3/Bio::MAGETAB::Publication.3 Manifying blib/man3/Bio::MAGETAB::Reporter.3 Manifying blib/man3/Bio::MAGETAB::SDRF.3 Manifying blib/man3/Bio::MAGETAB::SDRFRow.3 Manifying blib/man3/Bio::MAGETAB::Sample.3 Manifying blib/man3/Bio::MAGETAB::Source.3 Manifying blib/man3/Bio::MAGETAB::TermSource.3 Manifying blib/man3/Bio::MAGETAB::Types.3 Manifying blib/man3/Bio::MAGETAB::Util::Builder.3 Manifying blib/man3/Bio::MAGETAB::Util::DBLoader.3 Manifying blib/man3/Bio::MAGETAB::Util::Persistence.3 Manifying blib/man3/Bio::MAGETAB::Util::Reader.3 Manifying blib/man3/Bio::MAGETAB::Util::Reader::ADF.3 Manifying blib/man3/Bio::MAGETAB::Util::Reader::DataMatrix.3 Manifying blib/man3/Bio::MAGETAB::Util::Reader::IDF.3 Manifying blib/man3/Bio::MAGETAB::Util::Reader::SDRF.3 Manifying blib/man3/Bio::MAGETAB::Util::Reader::Tabfile.3 Manifying blib/man3/Bio::MAGETAB::Util::Reader::TagValueFile.3 Manifying blib/man3/Bio::MAGETAB::Util::RewriteAE.3 Manifying blib/man3/Bio::MAGETAB::Util::Writer.3 Manifying blib/man3/Bio::MAGETAB::Util::Writer::ADF.3 Manifying blib/man3/Bio::MAGETAB::Util::Writer::GraphViz.3 Manifying blib/man3/Bio::MAGETAB::Util::Writer::IDF.3 Manifying blib/man3/Bio::MAGETAB::Util::Writer::SDRF.3 Manifying blib/man3/Bio::MAGETAB::Util::Writer::Tabfile.3 --- all --- =========================================================================== =================================================== ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-Date-Manip>=5.44 - found ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-DateTime>=0.43.02 - found ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-DateTime-Format-DateManip>=0.04 - found ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-Email-Valid>=0.179 - found ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-Moose>=0.43 - found ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-MooseX-FollowPBP>=0.04 - found ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-MooseX-Types>=0.10 - found ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-Params-Coerce>=0.14 - found ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-Parse-RecDescent>=1.965.001 - found ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-Text-CSV_XS>=0.32 - found ===> p5-Bio-MAGETAB-1.31_1 depends on package: p5-URI>=1.35 - found ===> p5-Bio-MAGETAB-1.31_1 depends on package: perl5>=5.20<5.21 - found =========================================================================== =================================================== ===> Staging for p5-Bio-MAGETAB-1.31_1 ===> Generating temporary packing list Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/BaseClass.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/ProtocolApplication.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Feature.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/SDRFRow.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/DataMatrix.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/DatabaseEntry.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/DataFile.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Edge.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/SDRF.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Types.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Comment.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/FactorValue.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Node.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Measurement.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Normalization.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/TermSource.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Sample.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Reporter.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/ParameterValue.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Protocol.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Assay.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/ProtocolParameter.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Extract.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/ArrayDesign.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Investigation.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Source.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Event.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/LabeledExtract.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Contact.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/DataAcquisition.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/MatrixRow.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Factor.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/MatrixColumn.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Publication.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/DesignElement.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Material.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/ControlledTerm.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/CompositeElement.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Data.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Util/Reader.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Util/RewriteAE.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Util/Persistence.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Util/DBLoader.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Util/Writer.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Util/Builder.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Util/Reader/SDRF.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Util/Reader/DataMatrix.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Util/Reader/ADF.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Util/Reader/TagValueFile.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Util/Reader/Tabfile.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Util/Reader/IDF.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Util/Writer/Tabfile.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Util/Writer/IDF.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Util/Writer/SDRF.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Util/Writer/GraphViz.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/Bio/MAGETAB/Util/Writer/ADF.pm Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Util::Reader::IDF.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Util::Persistence.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Util::DBLoader.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Util::Reader::Tabfile.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Util::Reader::SDRF.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Util::Reader.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Util::RewriteAE.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Util::Writer.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Util::Reader::DataMatrix.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Util::Reader::TagValueFile.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Util::Reader::ADF.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Util::Writer::Tabfile.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Util::Writer::GraphViz.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Util::Writer::SDRF.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Util::Writer::ADF.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Util::Writer::IDF.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::FactorValue.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Contact.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Types.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Measurement.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Event.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::DataMatrix.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Factor.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::ControlledTerm.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Comment.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::TermSource.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::ParameterValue.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::CompositeElement.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::BaseClass.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Data.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Material.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::LabeledExtract.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Feature.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Sample.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Edge.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Reporter.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::SDRF.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::SDRFRow.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Investigation.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Util::Builder.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Normalization.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Extract.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::MatrixColumn.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::DesignElement.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::MatrixRow.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Protocol.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::DataAcquisition.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::DatabaseEntry.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::DataFile.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::ProtocolParameter.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Node.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::ProtocolApplication.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Assay.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Source.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::Publication.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::MAGETAB::ArrayDesign.3 Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/bin/deploy_magetab_db.pl Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/bin/fix_ae_magetab.pl Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/bin/read_magetab.pl Installing /wrkdirs/biology/p5-Bio-MAGETAB/stage/usr/local/bin/unload_magetab_namespace.pl ====> Compressing man pages (compress-man) =========================================================================== =================================================== ===> Building package for p5-Bio-MAGETAB-1.31_1 file sizes/checksums [122]: .. done packing files [122]: .. done packing directories [0]: . done =========================================================================== => Cleaning up wrkdir ===> Cleaning for p5-Bio-MAGETAB-1.31_1 build of biology/p5-Bio-MAGETAB ended at Sat Oct 8 15:00:27 PDT 2016 build time: 00:00:18