=> Building science/minc2 build started at Sun Oct 9 12:28:24 PDT 2016 port directory: /usr/ports/science/minc2 building for: DragonFly pkgbox64.dragonflybsd.org 4.7-DEVELOPMENT DragonFly v4.7.0.78.g7d868-DEVELOPMENT #7: Mon Aug 1 22:25:32 PDT 2016 root@pkgbox64.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 maintained by: ports@FreeBSD.org ident warning: no id keywords in /build/boomdata/data/.m/Release46-default/ref/../05//usr/ports/science/minc2/Makefile Makefile ident: Poudriere version: 3.1-pre Host OSVERSION: 400700 Jail OSVERSION: 400600 ---Begin Environment--- STATUS=1 SAVED_TERM=screen MASTERMNT=/build/boomdata/data/.m/Release46-default/ref PATH=/usr/local/libexec/poudriere:/sbin:/bin:/usr/sbin:/usr/bin:/usr/pkg/bin:/usr/pkg/sbin:/usr/games:/usr/local/sbin:/usr/local/bin:/usr/pkg/xorg/bin:/usr/X11R6/bin:/root/bin:/sbin:/usr/sbin POUDRIERE_BUILD_TYPE=bulk PKGNAME=minc2-2.2.00_4,1 OLDPWD=/root/boom PWD=/build/boomdata/data/.m/Release46-default/ref/.p/pool MASTERNAME=Release46-default TERM=cons25 USER=root HOME=/root POUDRIERE_VERSION=3.1-pre LOCALBASE=/usr/local PACKAGE_BUILDING=yes ---End Environment--- ---Begin OPTIONS List--- ---End OPTIONS List--- --CONFIGURE_ARGS-- --enable-shared=yes --enable-static=yes --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl XDG_DATA_HOME=/wrkdirs/science/minc2 XDG_CONFIG_HOME=/wrkdirs/science/minc2 HOME=/wrkdirs/science/minc2 TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc50 CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144 --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/science/minc2 XDG_CONFIG_HOME=/wrkdirs/science/minc2 HOME=/wrkdirs/science/minc2 TMPDIR="/tmp" NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc50 PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" NOPROFILE=1 CC="cc" CFLAGS="-pipe -Wno-error=return-type -O2 -fno-strict-aliasing" CPP="cpp" CPPFLAGS="-I/usr/local/include" LDFLAGS=" -L/usr/local/lib" LIBS="" CXX="c++" CXXFLAGS=" -pipe -Wno-error=return-type -O2 -fno-strict-aliasing" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 444" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- OSREL=4.6 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local PORTDOCS="" PORTEXAMPLES="" LIB32DIR=lib PERL_VERSION=5.20.3 PERL_VER=5.20 PERL5_MAN1=lib/perl5/site_perl/man/man1 PERL5_MAN3=lib/perl5/site_perl/man/man3 SITE_PERL=lib/perl5/site_perl SITE_ARCH=lib/perl5/site_perl/mach/5.20 PROFILE="@comment " DOCSDIR="share/doc/minc" EXAMPLESDIR="share/examples/minc" DATADIR="share/minc" WWWDIR="www/minc" ETCDIR="etc/minc" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/minc DOCSDIR=/usr/local/share/doc/minc EXAMPLESDIR=/usr/local/share/examples/minc WWWDIR=/usr/local/www/minc ETCDIR=/usr/local/etc/minc --End SUB_LIST-- ---Begin make.conf--- NO_BACKUP=yes USE_PACKAGE_DEPENDS=yes PKG_CREATE_VERBOSE=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORT_DBDIR=/options PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles MAKE_JOBS_NUMBER=5 ---End make.conf--- =================================================== ===> NOTICE: The minc port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License MIT accepted by the user =========================================================================== =================================================== ===> minc2-2.2.00_4,1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.8.7_3.txz Installing pkg-1.8.7_3... Extracting pkg-1.8.7_3: .......... done ===> minc2-2.2.00_4,1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of minc2-2.2.00_4,1 =========================================================================== =================================================== =========================================================================== =================================================== ===> NOTICE: The minc port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License MIT accepted by the user ===> Fetching all distfiles required by minc2-2.2.00_4,1 for building =========================================================================== =================================================== ===> NOTICE: The minc port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License MIT accepted by the user ===> Fetching all distfiles required by minc2-2.2.00_4,1 for building => SHA256 Checksum OK for BIC-MNI-minc-release-2.2.00_GH0.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> NOTICE: The minc port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License MIT accepted by the user ===> Fetching all distfiles required by minc2-2.2.00_4,1 for building ===> Extracting for minc2-2.2.00_4,1 => SHA256 Checksum OK for BIC-MNI-minc-release-2.2.00_GH0.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for minc2-2.2.00_4,1 ===> Applying ports patches for minc2-2.2.00_4,1 =========================================================================== =================================================== ===> minc2-2.2.00_4,1 depends on executable: autoconf-2.69 - not found ===> Installing existing package /packages/All/autoconf-2.69_1.txz Installing autoconf-2.69_1... `-- Installing indexinfo-0.2.5... `-- Extracting indexinfo-0.2.5: .... done `-- Installing autoconf-wrapper-20131203... `-- Extracting autoconf-wrapper-20131203: ........ done `-- Installing perl5-5.20.3_15... `-- Extracting perl5-5.20.3_15: .......... done `-- Installing m4-1.4.17_1,1... `-- Extracting m4-1.4.17_1,1: .......... done Extracting autoconf-2.69_1: .......... done Message from perl5-5.20.3_15: The /usr/bin/perl symlink has been removed starting with Perl 5.20. For shebangs, you should either use: #!/usr/local/bin/perl or #!/usr/bin/env perl The first one will only work if you have a /usr/local/bin/perl, the second will work as long as perl is in PATH. ===> minc2-2.2.00_4,1 depends on executable: autoconf-2.69 - found ===> Returning to build of minc2-2.2.00_4,1 ===> minc2-2.2.00_4,1 depends on executable: autoheader-2.69 - found ===> minc2-2.2.00_4,1 depends on executable: autoreconf-2.69 - found ===> minc2-2.2.00_4,1 depends on executable: aclocal-1.15 - not found ===> Installing existing package /packages/All/automake-1.15_1.txz Installing automake-1.15_1... `-- Installing automake-wrapper-20131203... `-- Extracting automake-wrapper-20131203: ... done Extracting automake-1.15_1: .......... done ===> minc2-2.2.00_4,1 depends on executable: aclocal-1.15 - found ===> Returning to build of minc2-2.2.00_4,1 ===> minc2-2.2.00_4,1 depends on executable: automake-1.15 - found ===> minc2-2.2.00_4,1 depends on executable: libtoolize - not found ===> Installing existing package /packages/All/libtool-2.4.6.txz Installing libtool-2.4.6... Extracting libtool-2.4.6: .......... done ===> minc2-2.2.00_4,1 depends on executable: libtoolize - found ===> Returning to build of minc2-2.2.00_4,1 ===> minc2-2.2.00_4,1 depends on executable: bison - not found ===> Installing existing package /packages/All/bison-2.7.1,1.txz Installing bison-2.7.1,1... `-- Installing gettext-runtime-0.19.8.1... `-- Extracting gettext-runtime-0.19.8.1: .......... done Extracting bison-2.7.1,1: .......... done ===> minc2-2.2.00_4,1 depends on executable: bison - found ===> Returning to build of minc2-2.2.00_4,1 ===> minc2-2.2.00_4,1 depends on executable: gmake - not found ===> Installing existing package /packages/All/gmake-4.2.1_1.txz Installing gmake-4.2.1_1... Extracting gmake-4.2.1_1: .......... done ===> minc2-2.2.00_4,1 depends on executable: gmake - found ===> Returning to build of minc2-2.2.00_4,1 ===> minc2-2.2.00_4,1 depends on package: perl5>=5.20<5.21 - found =========================================================================== =================================================== ===> minc2-2.2.00_4,1 depends on shared library: libhdf5.so - not found ===> Installing existing package /packages/All/hdf5-1.10.0.txz Installing hdf5-1.10.0... `-- Installing hdf-szip-2.1_2... `-- Extracting hdf-szip-2.1_2: ........ done Extracting hdf5-1.10.0: .......... done ===> minc2-2.2.00_4,1 depends on shared library: libhdf5.so - found (/usr/local/lib/libhdf5.so) ===> Returning to build of minc2-2.2.00_4,1 ===> minc2-2.2.00_4,1 depends on shared library: libnetcdf.so - not found ===> Installing existing package /packages/All/netcdf-4.4.0_2.txz Installing netcdf-4.4.0_2... `-- Installing pkgconf-1.0.1... `-- Extracting pkgconf-1.0.1: .......... done `-- Installing curl-7.50.3... | `-- Installing ca_root_nss-3.27... | `-- Extracting ca_root_nss-3.27: ....... done | `-- Installing krb5-1.14.4... | `-- Extracting krb5-1.14.4: .......... done `-- Extracting curl-7.50.3: .......... done `-- Installing ncurses-6.0_5... `-- Extracting ncurses-6.0_5: .......... done Extracting netcdf-4.4.0_2: .......... done Message from ca_root_nss-3.27: ********************************* WARNING ********************************* FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. *********************************** NOTE ********************************** This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem *************************************************************************** Message from ncurses-6.0_5: ===> NOTICE: The ncurses port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> minc2-2.2.00_4,1 depends on shared library: libnetcdf.so - found (/usr/local/lib/libnetcdf.so) ===> Returning to build of minc2-2.2.00_4,1 =========================================================================== =================================================== ===> Configuring for minc2-2.2.00_4,1 aclocal-1.15: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:29: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... m4/libtool.m4:1022: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:4170: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:5253: _LT_LANG_C_CONFIG is expanded from... m4/libtool.m4:138: _LT_SETUP is expanded from... m4/libtool.m4:67: LT_INIT is expanded from... m4/libtool.m4:102: AC_PROG_LIBTOOL is expanded from... configure.in:29: the top level configure.in:29: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... m4/libtool.m4:4170: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:5253: _LT_LANG_C_CONFIG is expanded from... m4/libtool.m4:138: _LT_SETUP is expanded from... m4/libtool.m4:67: LT_INIT is expanded from... m4/libtool.m4:102: AC_PROG_LIBTOOL is expanded from... configure.in:29: the top level configure.in:29: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... m4/libtool.m4:1022: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:4170: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:5253: _LT_LANG_C_CONFIG is expanded from... m4/libtool.m4:138: _LT_SETUP is expanded from... m4/libtool.m4:67: LT_INIT is expanded from... m4/libtool.m4:102: AC_PROG_LIBTOOL is expanded from... configure.in:29: the top level configure.in:29: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from... m4/libtool.m4:4170: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:5253: _LT_LANG_C_CONFIG is expanded from... m4/libtool.m4:138: _LT_SETUP is expanded from... m4/libtool.m4:67: LT_INIT is expanded from... m4/libtool.m4:102: AC_PROG_LIBTOOL is expanded from... configure.in:29: the top level libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'ac_config_aux'. libtoolize: copying file 'ac_config_aux/ltmain.sh' libtoolize: putting macros in 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.in, libtoolize: and rerunning libtoolize and aclocal. aclocal-1.15: warning: autoconf input should be named 'configure.ac', not 'configure.in' automake-1.15: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:16: installing 'ac_config_aux/compile' configure.in:29: installing 'ac_config_aux/config.guess' configure.in:29: installing 'ac_config_aux/config.sub' configure.in:7: installing 'ac_config_aux/install-sh' configure.in:7: installing 'ac_config_aux/missing' Makefile.am:24: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') automake-1.15: warning: autoconf input should be named 'configure.ac', not 'configure.in' Makefile.am: installing 'ac_config_aux/depcomp' configure.in: installing 'ac_config_aux/ylwrap' libsrc2/test/Makefile.am:1: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') parallel-tests: installing 'ac_config_aux/test-driver' testdir/Makefile.am:1: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') volume_io/Testing/Makefile.am:3: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure: loading site script /usr/ports/Templates/config.site checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... (cached) /bin/mkdir -p checking for gawk... (cached) /usr/bin/awk checking whether gmake sets $(MAKE)... yes checking whether gmake supports nested variables... yes checking whether ln -s works... yes checking whether gmake sets $(MAKE)... (cached) yes checking for style of include used by gmake... GNU checking for gcc... cc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ISO C89... none needed checking whether cc understands -c and -o together... yes checking dependency style of cc... gcc3 checking for g77... no checking for xlf... no checking for f77... no checking for frt... no checking for pgf77... no checking for cf77... no checking for fort77... no checking for fl32... no checking for af77... no checking for xlf90... no checking for f90... no checking for pgf90... no checking for pghpf... no checking for epcf90... no checking for gfortran... no checking for g95... no checking for xlf95... no checking for f95... no checking for fort... no checking for ifort... no checking for ifc... no checking for efc... no checking for pgfortran... no checking for pgf95... no checking for lf95... no checking for ftn... no checking for nagfor... no checking whether we are using the GNU Fortran 77 compiler... no checking whether accepts -g... no checking for flex... flex checking lex output file root... lex.yy checking lex library... -lfl checking whether yytext is a pointer... yes checking for bison... bison -y checking whether time.h and sys/time.h may both be included... yes checking for dirent.h that defines DIR... yes checking for library containing opendir... none required checking how to run the C preprocessor... cpp checking for grep that handles long lines and -e... (cached) /usr/bin/grep checking for egrep... (cached) /usr/bin/egrep checking for ANSI C header files... (cached) yes checking for sys/types.h... (cached) yes checking for sys/stat.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for memory.h... (cached) yes checking for strings.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/time.h... (cached) yes checking for sys/stat.h... (cached) yes checking for sys/wait.h... (cached) yes checking for unistd.h... (cached) yes checking for fcntl.h... (cached) yes checking for pwd.h... (cached) yes checking for float.h... (cached) yes checking values.h usability... no checking values.h presence... no checking for values.h... no checking for int32_t... (cached) yes checking for int16_t... (cached) yes checking build system type... x86_64-portbld-dragonfly4.6 checking host system type... x86_64-portbld-dragonfly4.6 checking how to print strings... printf checking for a sed that does not truncate output... (cached) /usr/bin/sed checking for fgrep... (cached) /usr/bin/fgrep checking for ld used by cc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking the maximum length of command line arguments... (cached) 262144 checking how to convert x86_64-portbld-dragonfly4.6 file names to x86_64-portbld-dragonfly4.6 format... func_convert_file_noop checking how to convert x86_64-portbld-dragonfly4.6 file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from cc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... mt checking if mt is a manifest tool... no checking for dlfcn.h... (cached) yes checking for objdir... .libs checking if cc supports -fno-rtti -fno-exceptions... no checking for cc option to produce PIC... -fPIC -DPIC checking if cc PIC flag -fPIC -DPIC works... yes checking if cc static flag -static works... yes checking if cc supports -c -o file.o... yes checking if cc supports -c -o file.o... (cached) yes checking whether the cc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... dragonfly4.6 ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for pod2man... /usr/local/bin/pod2man checking for library m... yes checking for library netcdf... yes checking for library z... yes checking for library hdf5... yes checking for strdup... (cached) yes checking for mkstemp... (cached) yes checking for tempnam... yes checking for tmpnam... yes checking for getpwnam... yes checking for select... (cached) yes checking for strerror... (cached) yes checking for sysconf... (cached) yes checking for pid_t... (cached) yes checking for vfork.h... (cached) no checking for fork... (cached) yes checking for vfork... (cached) yes checking for working fork... yes checking for working vfork... (cached) yes checking for system... yes checking for popen... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating epm-header config.status: creating doc/Makefile config.status: creating testdir/Makefile config.status: creating libsrc2/test/Makefile config.status: creating volume_io/Makefile config.status: creating volume_io/Documentation/Makefile config.status: creating volume_io/Testing/Makefile config.status: creating progs/xfm/xfmflip config.status: creating progs/minccomplete/minccomplete config.status: creating progs/minchistory/minchistory config.status: creating progs/mincpik/mincpik config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands =========================================================================== =================================================== ===> Building for minc2-2.2.00_4,1 gmake[1]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00' gmake all-recursive gmake[2]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00' Making all in . gmake[3]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00' depbase=`echo libsrc/ParseArgv.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc/ParseArgv.lo -MD -MP -MF $depbase.Tpo -c -o libsrc/ParseArgv.lo libsrc/ParseArgv.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc/ParseArgv.lo -MD -MP -MF libsrc/.deps/ParseArgv.Tpo -c libsrc/ParseArgv.c -fPIC -DPIC -o libsrc/.libs/ParseArgv.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc/ParseArgv.lo -MD -MP -MF libsrc/.deps/ParseArgv.Tpo -c libsrc/ParseArgv.c -o libsrc/ParseArgv.o >/dev/null 2>&1 depbase=`echo libsrc/read_file_names.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc/read_file_names.lo -MD -MP -MF $depbase.Tpo -c -o libsrc/read_file_names.lo libsrc/read_file_names.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib 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libsrc/.deps/minc_simple.Tpo -c libsrc/minc_simple.c -o libsrc/minc_simple.o >/dev/null 2>&1 depbase=`echo libsrc2/convert.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/convert.lo -MD -MP -MF $depbase.Tpo -c -o libsrc2/convert.lo libsrc2/convert.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/convert.lo -MD -MP -MF libsrc2/.deps/convert.Tpo -c libsrc2/convert.c -fPIC -DPIC -o libsrc2/.libs/convert.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib 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-DPIC -o libsrc2/.libs/datatype.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/datatype.lo -MD -MP -MF libsrc2/.deps/datatype.Tpo -c libsrc2/datatype.c -o libsrc2/datatype.o >/dev/null 2>&1 depbase=`echo libsrc2/dimension.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/dimension.lo -MD -MP -MF $depbase.Tpo -c -o libsrc2/dimension.lo libsrc2/dimension.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/dimension.lo -MD -MP -MF libsrc2/.deps/dimension.Tpo -c libsrc2/dimension.c -fPIC -DPIC -o libsrc2/.libs/dimension.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/dimension.lo -MD -MP -MF libsrc2/.deps/dimension.Tpo -c libsrc2/dimension.c -o libsrc2/dimension.o >/dev/null 2>&1 depbase=`echo libsrc2/free.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/free.lo -MD -MP -MF $depbase.Tpo -c -o libsrc2/free.lo libsrc2/free.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/free.lo -MD -MP -MF libsrc2/.deps/free.Tpo -c libsrc2/free.c -fPIC -DPIC -o libsrc2/.libs/free.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/free.lo -MD -MP -MF libsrc2/.deps/free.Tpo -c libsrc2/free.c -o libsrc2/free.o >/dev/null 2>&1 depbase=`echo libsrc2/grpattr.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/grpattr.lo -MD -MP -MF $depbase.Tpo -c -o libsrc2/grpattr.lo libsrc2/grpattr.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/grpattr.lo -MD -MP -MF libsrc2/.deps/grpattr.Tpo -c libsrc2/grpattr.c -fPIC -DPIC -o libsrc2/.libs/grpattr.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/grpattr.lo -MD -MP -MF libsrc2/.deps/grpattr.Tpo -c libsrc2/grpattr.c -o libsrc2/grpattr.o >/dev/null 2>&1 depbase=`echo libsrc2/hyper.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/hyper.lo -MD -MP -MF $depbase.Tpo -c -o libsrc2/hyper.lo libsrc2/hyper.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/hyper.lo -MD -MP -MF libsrc2/.deps/hyper.Tpo -c libsrc2/hyper.c -fPIC -DPIC -o libsrc2/.libs/hyper.o libsrc2/hyper.c: In function 'miget_real_value_hyperslab': libsrc2/hyper.c:769:11: warning: 'return' with no value, in function returning non-void return; ^ libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/hyper.lo -MD -MP -MF libsrc2/.deps/hyper.Tpo -c libsrc2/hyper.c -o libsrc2/hyper.o >/dev/null 2>&1 depbase=`echo libsrc2/label.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/label.lo -MD -MP -MF $depbase.Tpo -c -o libsrc2/label.lo libsrc2/label.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/label.lo -MD -MP -MF libsrc2/.deps/label.Tpo -c libsrc2/label.c -fPIC -DPIC -o libsrc2/.libs/label.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/label.lo -MD -MP -MF libsrc2/.deps/label.Tpo -c libsrc2/label.c -o libsrc2/label.o >/dev/null 2>&1 depbase=`echo libsrc2/m2util.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/m2util.lo -MD -MP -MF $depbase.Tpo -c -o libsrc2/m2util.lo libsrc2/m2util.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/m2util.lo -MD -MP -MF libsrc2/.deps/m2util.Tpo -c libsrc2/m2util.c -fPIC -DPIC -o libsrc2/.libs/m2util.o libsrc2/m2util.c: In function 'minc_update_thumbnail': libsrc2/m2util.c:1627:32: warning: passing argument 4 of 'H5Sselect_elements' from incompatible pointer type [-Wincompatible-pointer-types] (const H5_START_T **) &start[0]); ^ In file included from /usr/local/include/hdf5.h:39:0, from libsrc2/m2util.c:8: /usr/local/include/H5Spublic.h:130:15: note: expected 'const hsize_t * {aka const long long unsigned int *}' but argument is of type 'const hsize_t ** {aka const long long unsigned int **}' H5_DLL herr_t H5Sselect_elements(hid_t space_id, H5S_seloper_t op, ^ libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/m2util.lo -MD -MP -MF libsrc2/.deps/m2util.Tpo -c libsrc2/m2util.c -o libsrc2/m2util.o >/dev/null 2>&1 depbase=`echo libsrc2/record.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/record.lo -MD -MP -MF $depbase.Tpo -c -o libsrc2/record.lo libsrc2/record.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/record.lo -MD -MP -MF libsrc2/.deps/record.Tpo -c libsrc2/record.c -fPIC -DPIC -o libsrc2/.libs/record.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/record.lo -MD -MP -MF libsrc2/.deps/record.Tpo -c libsrc2/record.c -o libsrc2/record.o >/dev/null 2>&1 depbase=`echo libsrc2/slice.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/slice.lo -MD -MP -MF $depbase.Tpo -c -o libsrc2/slice.lo libsrc2/slice.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/slice.lo -MD -MP -MF libsrc2/.deps/slice.Tpo -c libsrc2/slice.c -fPIC -DPIC -o libsrc2/.libs/slice.o libsrc2/slice.c: In function 'mirw_slice_minmax': libsrc2/slice.c:87:5: warning: passing argument 4 of 'H5Sselect_elements' from incompatible pointer type [-Wincompatible-pointer-types] (const hsize_t **) &hdf_start); ^ In file included from /usr/local/include/hdf5.h:39:0, from libsrc2/slice.c:18: /usr/local/include/H5Spublic.h:130:15: note: expected 'const hsize_t * {aka const long long unsigned int *}' but argument is of type 'const hsize_t ** {aka const long long unsigned int **}' H5_DLL herr_t H5Sselect_elements(hid_t space_id, H5S_seloper_t op, ^ libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/slice.lo -MD -MP -MF libsrc2/.deps/slice.Tpo -c libsrc2/slice.c -o libsrc2/slice.o >/dev/null 2>&1 depbase=`echo libsrc2/valid.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/valid.lo -MD -MP -MF $depbase.Tpo -c -o libsrc2/valid.lo libsrc2/valid.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/valid.lo -MD -MP -MF libsrc2/.deps/valid.Tpo -c libsrc2/valid.c -fPIC -DPIC -o libsrc2/.libs/valid.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/valid.lo -MD -MP -MF libsrc2/.deps/valid.Tpo -c libsrc2/valid.c -o libsrc2/valid.o >/dev/null 2>&1 depbase=`echo libsrc2/volprops.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/volprops.lo -MD -MP -MF $depbase.Tpo -c -o libsrc2/volprops.lo libsrc2/volprops.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/volprops.lo -MD -MP -MF libsrc2/.deps/volprops.Tpo -c libsrc2/volprops.c -fPIC -DPIC -o libsrc2/.libs/volprops.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/volprops.lo -MD -MP -MF libsrc2/.deps/volprops.Tpo -c libsrc2/volprops.c -o libsrc2/volprops.o >/dev/null 2>&1 depbase=`echo libsrc2/volume.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/volume.lo -MD -MP -MF $depbase.Tpo -c -o libsrc2/volume.lo libsrc2/volume.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/volume.lo -MD -MP -MF libsrc2/.deps/volume.Tpo -c libsrc2/volume.c -fPIC -DPIC -o libsrc2/.libs/volume.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT libsrc2/volume.lo -MD -MP -MF libsrc2/.deps/volume.Tpo -c libsrc2/volume.c -o libsrc2/volume.o >/dev/null 2>&1 /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -version-info 3:0:0 -L/usr/local/lib -o libminc2.la -rpath /usr/local/lib libsrc/ParseArgv.lo libsrc/read_file_names.lo libsrc/dim_conversion.lo libsrc/image_conversion.lo libsrc/minc_convenience.lo libsrc/minc_error.lo libsrc/nd_loop.lo libsrc/netcdf_convenience.lo libsrc/time_stamp.lo libsrc/value_conversion.lo libsrc/voxel_loop.lo libsrc/hdf_convenience.lo libsrc/minc_compat.lo libsrc/minc_simple.lo libsrc2/convert.lo libsrc2/datatype.lo libsrc2/dimension.lo libsrc2/free.lo libsrc2/grpattr.lo libsrc2/hyper.lo libsrc2/label.lo libsrc2/m2util.lo libsrc2/record.lo libsrc2/slice.lo libsrc2/valid.lo libsrc2/volprops.lo libsrc2/volume.lo -lhdf5 -lz -lnetcdf -lm libtool: link: cc -shared -fPIC -DPIC libsrc/.libs/ParseArgv.o libsrc/.libs/read_file_names.o libsrc/.libs/dim_conversion.o libsrc/.libs/image_conversion.o libsrc/.libs/minc_convenience.o libsrc/.libs/minc_error.o libsrc/.libs/nd_loop.o libsrc/.libs/netcdf_convenience.o libsrc/.libs/time_stamp.o libsrc/.libs/value_conversion.o libsrc/.libs/voxel_loop.o libsrc/.libs/hdf_convenience.o libsrc/.libs/minc_compat.o libsrc/.libs/minc_simple.o libsrc2/.libs/convert.o libsrc2/.libs/datatype.o libsrc2/.libs/dimension.o libsrc2/.libs/free.o libsrc2/.libs/grpattr.o libsrc2/.libs/hyper.o libsrc2/.libs/label.o libsrc2/.libs/m2util.o libsrc2/.libs/record.o libsrc2/.libs/slice.o libsrc2/.libs/valid.o libsrc2/.libs/volprops.o libsrc2/.libs/volume.o -L/usr/local/lib -lhdf5 -lz -lnetcdf -lm -O2 -Wl,-soname -Wl,libminc2.so.3 -o .libs/libminc2.so.3.0.0 libtool: link: (cd ".libs" && rm -f "libminc2.so.3" && ln -s "libminc2.so.3.0.0" "libminc2.so.3") libtool: link: (cd ".libs" && rm -f "libminc2.so" && ln -s "libminc2.so.3.0.0" "libminc2.so") libtool: link: ar cru .libs/libminc2.a libsrc/ParseArgv.o libsrc/read_file_names.o libsrc/dim_conversion.o libsrc/image_conversion.o libsrc/minc_convenience.o libsrc/minc_error.o libsrc/nd_loop.o libsrc/netcdf_convenience.o libsrc/time_stamp.o libsrc/value_conversion.o libsrc/voxel_loop.o libsrc/hdf_convenience.o libsrc/minc_compat.o libsrc/minc_simple.o libsrc2/convert.o libsrc2/datatype.o libsrc2/dimension.o libsrc2/free.o libsrc2/grpattr.o libsrc2/hyper.o libsrc2/label.o libsrc2/m2util.o libsrc2/record.o libsrc2/slice.o libsrc2/valid.o libsrc2/volprops.o libsrc2/volume.o libtool: link: ranlib .libs/libminc2.a libtool: link: ( cd ".libs" && rm -f "libminc2.la" && ln -s "../libminc2.la" "libminc2.la" ) depbase=`echo volume_io/Geometry/colour.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/colour.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/Geometry/colour.lo volume_io/Geometry/colour.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/colour.lo -MD -MP -MF volume_io/Geometry/.deps/colour.Tpo -c volume_io/Geometry/colour.c -fPIC -DPIC -o volume_io/Geometry/.libs/colour.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/colour.lo -MD -MP -MF volume_io/Geometry/.deps/colour.Tpo -c volume_io/Geometry/colour.c -o volume_io/Geometry/colour.o >/dev/null 2>&1 depbase=`echo volume_io/Geometry/colour_def.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/colour_def.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/Geometry/colour_def.lo volume_io/Geometry/colour_def.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/colour_def.lo -MD -MP -MF volume_io/Geometry/.deps/colour_def.Tpo -c volume_io/Geometry/colour_def.c -fPIC -DPIC -o volume_io/Geometry/.libs/colour_def.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/colour_def.lo -MD -MP -MF volume_io/Geometry/.deps/colour_def.Tpo -c volume_io/Geometry/colour_def.c -o volume_io/Geometry/colour_def.o >/dev/null 2>&1 depbase=`echo volume_io/Geometry/gaussian.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/gaussian.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/Geometry/gaussian.lo volume_io/Geometry/gaussian.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/gaussian.lo -MD -MP -MF volume_io/Geometry/.deps/gaussian.Tpo -c volume_io/Geometry/gaussian.c -fPIC -DPIC -o volume_io/Geometry/.libs/gaussian.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/gaussian.lo -MD -MP -MF volume_io/Geometry/.deps/gaussian.Tpo -c volume_io/Geometry/gaussian.c -o volume_io/Geometry/gaussian.o >/dev/null 2>&1 depbase=`echo volume_io/Geometry/inverse.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/inverse.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/Geometry/inverse.lo volume_io/Geometry/inverse.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/inverse.lo -MD -MP -MF volume_io/Geometry/.deps/inverse.Tpo -c volume_io/Geometry/inverse.c -fPIC -DPIC -o volume_io/Geometry/.libs/inverse.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/inverse.lo -MD -MP -MF volume_io/Geometry/.deps/inverse.Tpo -c volume_io/Geometry/inverse.c -o volume_io/Geometry/inverse.o >/dev/null 2>&1 depbase=`echo volume_io/Geometry/newton.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/newton.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/Geometry/newton.lo volume_io/Geometry/newton.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/newton.lo -MD -MP -MF volume_io/Geometry/.deps/newton.Tpo -c volume_io/Geometry/newton.c -fPIC -DPIC -o volume_io/Geometry/.libs/newton.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/newton.lo -MD -MP -MF volume_io/Geometry/.deps/newton.Tpo -c volume_io/Geometry/newton.c -o volume_io/Geometry/newton.o >/dev/null 2>&1 depbase=`echo volume_io/Geometry/points.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/points.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/Geometry/points.lo volume_io/Geometry/points.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/points.lo -MD -MP -MF volume_io/Geometry/.deps/points.Tpo -c volume_io/Geometry/points.c -fPIC -DPIC -o volume_io/Geometry/.libs/points.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/points.lo -MD -MP -MF volume_io/Geometry/.deps/points.Tpo -c volume_io/Geometry/points.c -o volume_io/Geometry/points.o >/dev/null 2>&1 depbase=`echo volume_io/Geometry/splines.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/splines.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/Geometry/splines.lo volume_io/Geometry/splines.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/splines.lo -MD -MP -MF volume_io/Geometry/.deps/splines.Tpo -c volume_io/Geometry/splines.c -fPIC -DPIC -o volume_io/Geometry/.libs/splines.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/splines.lo -MD -MP -MF volume_io/Geometry/.deps/splines.Tpo -c volume_io/Geometry/splines.c -o volume_io/Geometry/splines.o >/dev/null 2>&1 depbase=`echo volume_io/Geometry/tensors.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/tensors.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/Geometry/tensors.lo volume_io/Geometry/tensors.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/tensors.lo -MD -MP -MF volume_io/Geometry/.deps/tensors.Tpo -c volume_io/Geometry/tensors.c -fPIC -DPIC -o volume_io/Geometry/.libs/tensors.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/tensors.lo -MD -MP -MF volume_io/Geometry/.deps/tensors.Tpo -c volume_io/Geometry/tensors.c -o volume_io/Geometry/tensors.o >/dev/null 2>&1 depbase=`echo volume_io/Geometry/transforms.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/transforms.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/Geometry/transforms.lo volume_io/Geometry/transforms.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/transforms.lo -MD -MP -MF volume_io/Geometry/.deps/transforms.Tpo -c volume_io/Geometry/transforms.c -fPIC -DPIC -o volume_io/Geometry/.libs/transforms.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Geometry/transforms.lo -MD -MP -MF volume_io/Geometry/.deps/transforms.Tpo -c volume_io/Geometry/transforms.c -o volume_io/Geometry/transforms.o >/dev/null 2>&1 depbase=`echo volume_io/MNI_formats/gen_xf_io.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/MNI_formats/gen_xf_io.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/MNI_formats/gen_xf_io.lo volume_io/MNI_formats/gen_xf_io.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/MNI_formats/gen_xf_io.lo -MD -MP -MF volume_io/MNI_formats/.deps/gen_xf_io.Tpo -c volume_io/MNI_formats/gen_xf_io.c -fPIC -DPIC -o volume_io/MNI_formats/.libs/gen_xf_io.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/MNI_formats/gen_xf_io.lo -MD -MP -MF volume_io/MNI_formats/.deps/gen_xf_io.Tpo -c volume_io/MNI_formats/gen_xf_io.c -o volume_io/MNI_formats/gen_xf_io.o >/dev/null 2>&1 depbase=`echo volume_io/MNI_formats/gen_xfs.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/MNI_formats/gen_xfs.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/MNI_formats/gen_xfs.lo volume_io/MNI_formats/gen_xfs.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/MNI_formats/gen_xfs.lo -MD -MP -MF volume_io/MNI_formats/.deps/gen_xfs.Tpo -c volume_io/MNI_formats/gen_xfs.c -fPIC -DPIC -o volume_io/MNI_formats/.libs/gen_xfs.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/MNI_formats/gen_xfs.lo -MD -MP -MF volume_io/MNI_formats/.deps/gen_xfs.Tpo -c volume_io/MNI_formats/gen_xfs.c -o volume_io/MNI_formats/gen_xfs.o >/dev/null 2>&1 depbase=`echo volume_io/MNI_formats/grid_transforms.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/MNI_formats/grid_transforms.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/MNI_formats/grid_transforms.lo volume_io/MNI_formats/grid_transforms.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/MNI_formats/grid_transforms.lo -MD -MP -MF volume_io/MNI_formats/.deps/grid_transforms.Tpo -c volume_io/MNI_formats/grid_transforms.c -fPIC -DPIC -o volume_io/MNI_formats/.libs/grid_transforms.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/MNI_formats/grid_transforms.lo -MD -MP -MF volume_io/MNI_formats/.deps/grid_transforms.Tpo -c volume_io/MNI_formats/grid_transforms.c -o volume_io/MNI_formats/grid_transforms.o >/dev/null 2>&1 depbase=`echo volume_io/MNI_formats/mni_io.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/MNI_formats/mni_io.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/MNI_formats/mni_io.lo volume_io/MNI_formats/mni_io.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/MNI_formats/mni_io.lo -MD -MP -MF volume_io/MNI_formats/.deps/mni_io.Tpo -c volume_io/MNI_formats/mni_io.c -fPIC -DPIC -o volume_io/MNI_formats/.libs/mni_io.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/MNI_formats/mni_io.lo -MD -MP -MF volume_io/MNI_formats/.deps/mni_io.Tpo -c volume_io/MNI_formats/mni_io.c -o volume_io/MNI_formats/mni_io.o >/dev/null 2>&1 depbase=`echo volume_io/MNI_formats/tag_points.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/MNI_formats/tag_points.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/MNI_formats/tag_points.lo volume_io/MNI_formats/tag_points.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/MNI_formats/tag_points.lo -MD -MP -MF volume_io/MNI_formats/.deps/tag_points.Tpo -c volume_io/MNI_formats/tag_points.c -fPIC -DPIC -o volume_io/MNI_formats/.libs/tag_points.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/MNI_formats/tag_points.lo -MD -MP -MF volume_io/MNI_formats/.deps/tag_points.Tpo -c volume_io/MNI_formats/tag_points.c -o volume_io/MNI_formats/tag_points.o >/dev/null 2>&1 depbase=`echo 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-DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/MNI_formats/thin_plate_spline.lo -MD -MP -MF volume_io/MNI_formats/.deps/thin_plate_spline.Tpo -c volume_io/MNI_formats/thin_plate_spline.c -o volume_io/MNI_formats/thin_plate_spline.o >/dev/null 2>&1 depbase=`echo volume_io/Prog_utils/alloc.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Prog_utils/alloc.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/Prog_utils/alloc.lo volume_io/Prog_utils/alloc.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Prog_utils/alloc.lo -MD -MP -MF volume_io/Prog_utils/.deps/alloc.Tpo -c volume_io/Prog_utils/alloc.c -fPIC -DPIC -o volume_io/Prog_utils/.libs/alloc.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Prog_utils/alloc.lo -MD -MP -MF volume_io/Prog_utils/.deps/alloc.Tpo -c volume_io/Prog_utils/alloc.c -o volume_io/Prog_utils/alloc.o >/dev/null 2>&1 depbase=`echo volume_io/Prog_utils/alloc_check.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe 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volume_io/Prog_utils/alloc_check.o >/dev/null 2>&1 depbase=`echo volume_io/Prog_utils/arrays.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Prog_utils/arrays.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/Prog_utils/arrays.lo volume_io/Prog_utils/arrays.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Prog_utils/arrays.lo -MD -MP -MF volume_io/Prog_utils/.deps/arrays.Tpo -c volume_io/Prog_utils/arrays.c -fPIC -DPIC -o volume_io/Prog_utils/.libs/arrays.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Prog_utils/arrays.lo -MD -MP -MF volume_io/Prog_utils/.deps/arrays.Tpo -c volume_io/Prog_utils/arrays.c -o volume_io/Prog_utils/arrays.o >/dev/null 2>&1 depbase=`echo volume_io/Prog_utils/files.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Prog_utils/files.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/Prog_utils/files.lo volume_io/Prog_utils/files.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 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volume_io/Prog_utils/.deps/string.Tpo -c volume_io/Prog_utils/string.c -fPIC -DPIC -o volume_io/Prog_utils/.libs/string.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Prog_utils/string.lo -MD -MP -MF volume_io/Prog_utils/.deps/string.Tpo -c volume_io/Prog_utils/string.c -o volume_io/Prog_utils/string.o >/dev/null 2>&1 depbase=`echo volume_io/Prog_utils/time.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Prog_utils/time.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/Prog_utils/time.lo volume_io/Prog_utils/time.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Prog_utils/time.lo -MD -MP -MF volume_io/Prog_utils/.deps/time.Tpo -c volume_io/Prog_utils/time.c -fPIC -DPIC -o volume_io/Prog_utils/.libs/time.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Prog_utils/time.lo -MD -MP -MF volume_io/Prog_utils/.deps/time.Tpo -c volume_io/Prog_utils/time.c -o volume_io/Prog_utils/time.o >/dev/null 2>&1 depbase=`echo volume_io/Volumes/evaluate.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include 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libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/get_hyperslab.lo -MD -MP -MF volume_io/Volumes/.deps/get_hyperslab.Tpo -c volume_io/Volumes/get_hyperslab.c -o volume_io/Volumes/get_hyperslab.o >/dev/null 2>&1 depbase=`echo volume_io/Volumes/input_free.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/input_free.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/Volumes/input_free.lo volume_io/Volumes/input_free.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/input_free.lo -MD -MP -MF volume_io/Volumes/.deps/input_free.Tpo -c volume_io/Volumes/input_free.c -fPIC -DPIC -o volume_io/Volumes/.libs/input_free.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/input_free.lo -MD -MP -MF volume_io/Volumes/.deps/input_free.Tpo -c volume_io/Volumes/input_free.c -o volume_io/Volumes/input_free.o >/dev/null 2>&1 depbase=`echo volume_io/Volumes/input_mnc.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/input_mnc.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/Volumes/input_mnc.lo volume_io/Volumes/input_mnc.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/input_mnc.lo -MD -MP -MF volume_io/Volumes/.deps/input_mnc.Tpo -c volume_io/Volumes/input_mnc.c -fPIC -DPIC -o volume_io/Volumes/.libs/input_mnc.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/input_mnc.lo -MD -MP -MF volume_io/Volumes/.deps/input_mnc.Tpo -c volume_io/Volumes/input_mnc.c -o volume_io/Volumes/input_mnc.o >/dev/null 2>&1 depbase=`echo volume_io/Volumes/input_volume.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/input_volume.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/Volumes/input_volume.lo volume_io/Volumes/input_volume.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/input_volume.lo -MD -MP -MF volume_io/Volumes/.deps/input_volume.Tpo -c volume_io/Volumes/input_volume.c -fPIC -DPIC -o volume_io/Volumes/.libs/input_volume.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/input_volume.lo -MD -MP -MF volume_io/Volumes/.deps/input_volume.Tpo -c volume_io/Volumes/input_volume.c -o volume_io/Volumes/input_volume.o >/dev/null 2>&1 depbase=`echo volume_io/Volumes/multidim_arrays.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/multidim_arrays.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/Volumes/multidim_arrays.lo volume_io/Volumes/multidim_arrays.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/multidim_arrays.lo -MD -MP -MF volume_io/Volumes/.deps/multidim_arrays.Tpo -c volume_io/Volumes/multidim_arrays.c -fPIC -DPIC -o volume_io/Volumes/.libs/multidim_arrays.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/multidim_arrays.lo -MD -MP -MF volume_io/Volumes/.deps/multidim_arrays.Tpo -c volume_io/Volumes/multidim_arrays.c -o volume_io/Volumes/multidim_arrays.o >/dev/null 2>&1 depbase=`echo volume_io/Volumes/output_mnc.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/output_mnc.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/Volumes/output_mnc.lo volume_io/Volumes/output_mnc.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/output_mnc.lo -MD -MP -MF volume_io/Volumes/.deps/output_mnc.Tpo -c volume_io/Volumes/output_mnc.c -fPIC -DPIC -o volume_io/Volumes/.libs/output_mnc.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/output_mnc.lo -MD -MP -MF volume_io/Volumes/.deps/output_mnc.Tpo -c volume_io/Volumes/output_mnc.c -o volume_io/Volumes/output_mnc.o >/dev/null 2>&1 depbase=`echo volume_io/Volumes/output_volume.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/output_volume.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/Volumes/output_volume.lo volume_io/Volumes/output_volume.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/output_volume.lo -MD -MP -MF volume_io/Volumes/.deps/output_volume.Tpo -c volume_io/Volumes/output_volume.c -fPIC -DPIC -o volume_io/Volumes/.libs/output_volume.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/output_volume.lo -MD -MP -MF volume_io/Volumes/.deps/output_volume.Tpo -c volume_io/Volumes/output_volume.c -o volume_io/Volumes/output_volume.o >/dev/null 2>&1 depbase=`echo volume_io/Volumes/set_hyperslab.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/set_hyperslab.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/Volumes/set_hyperslab.lo volume_io/Volumes/set_hyperslab.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/set_hyperslab.lo -MD -MP -MF volume_io/Volumes/.deps/set_hyperslab.Tpo -c volume_io/Volumes/set_hyperslab.c -fPIC -DPIC -o volume_io/Volumes/.libs/set_hyperslab.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/set_hyperslab.lo -MD -MP -MF volume_io/Volumes/.deps/set_hyperslab.Tpo -c volume_io/Volumes/set_hyperslab.c -o volume_io/Volumes/set_hyperslab.o >/dev/null 2>&1 depbase=`echo volume_io/Volumes/volume_cache.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/volume_cache.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/Volumes/volume_cache.lo volume_io/Volumes/volume_cache.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/volume_cache.lo -MD -MP -MF volume_io/Volumes/.deps/volume_cache.Tpo -c volume_io/Volumes/volume_cache.c -fPIC -DPIC -o volume_io/Volumes/.libs/volume_cache.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/volume_cache.lo -MD -MP -MF volume_io/Volumes/.deps/volume_cache.Tpo -c volume_io/Volumes/volume_cache.c -o volume_io/Volumes/volume_cache.o >/dev/null 2>&1 depbase=`echo volume_io/Volumes/volumes.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/volumes.lo -MD -MP -MF $depbase.Tpo -c -o volume_io/Volumes/volumes.lo volume_io/Volumes/volumes.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/volumes.lo -MD -MP -MF volume_io/Volumes/.deps/volumes.Tpo -c volume_io/Volumes/volumes.c -fPIC -DPIC -o volume_io/Volumes/.libs/volumes.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT volume_io/Volumes/volumes.lo -MD -MP -MF volume_io/Volumes/.deps/volumes.Tpo -c volume_io/Volumes/volumes.c -o volume_io/Volumes/volumes.o >/dev/null 2>&1 /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -version-info 3:0:0 -L/usr/local/lib -o libvolume_io2.la -rpath /usr/local/lib volume_io/Geometry/colour.lo volume_io/Geometry/colour_def.lo volume_io/Geometry/gaussian.lo volume_io/Geometry/inverse.lo volume_io/Geometry/newton.lo volume_io/Geometry/points.lo volume_io/Geometry/splines.lo volume_io/Geometry/tensors.lo volume_io/Geometry/transforms.lo volume_io/MNI_formats/gen_xf_io.lo volume_io/MNI_formats/gen_xfs.lo volume_io/MNI_formats/grid_transforms.lo volume_io/MNI_formats/mni_io.lo volume_io/MNI_formats/tag_points.lo volume_io/MNI_formats/thin_plate_spline.lo volume_io/Prog_utils/alloc.lo volume_io/Prog_utils/alloc_check.lo volume_io/Prog_utils/arrays.lo volume_io/Prog_utils/files.lo volume_io/Prog_utils/print.lo volume_io/Prog_utils/progress.lo volume_io/Prog_utils/string.lo volume_io/Prog_utils/time.lo volume_io/Volumes/evaluate.lo volume_io/Volumes/get_hyperslab.lo volume_io/Volumes/input_free.lo volume_io/Volumes/input_mnc.lo volume_io/Volumes/input_volume.lo volume_io/Volumes/multidim_arrays.lo volume_io/Volumes/output_mnc.lo volume_io/Volumes/output_volume.lo volume_io/Volumes/set_hyperslab.lo volume_io/Volumes/volume_cache.lo volume_io/Volumes/volumes.lo -lhdf5 -lz -lnetcdf -lm libtool: link: cc -shared -fPIC -DPIC volume_io/Geometry/.libs/colour.o volume_io/Geometry/.libs/colour_def.o volume_io/Geometry/.libs/gaussian.o volume_io/Geometry/.libs/inverse.o volume_io/Geometry/.libs/newton.o volume_io/Geometry/.libs/points.o volume_io/Geometry/.libs/splines.o volume_io/Geometry/.libs/tensors.o volume_io/Geometry/.libs/transforms.o volume_io/MNI_formats/.libs/gen_xf_io.o volume_io/MNI_formats/.libs/gen_xfs.o volume_io/MNI_formats/.libs/grid_transforms.o volume_io/MNI_formats/.libs/mni_io.o volume_io/MNI_formats/.libs/tag_points.o volume_io/MNI_formats/.libs/thin_plate_spline.o volume_io/Prog_utils/.libs/alloc.o volume_io/Prog_utils/.libs/alloc_check.o volume_io/Prog_utils/.libs/arrays.o volume_io/Prog_utils/.libs/files.o volume_io/Prog_utils/.libs/print.o volume_io/Prog_utils/.libs/progress.o volume_io/Prog_utils/.libs/string.o volume_io/Prog_utils/.libs/time.o volume_io/Volumes/.libs/evaluate.o volume_io/Volumes/.libs/get_hyperslab.o volume_io/Volumes/.libs/input_free.o volume_io/Volumes/.libs/input_mnc.o volume_io/Volumes/.libs/input_volume.o volume_io/Volumes/.libs/multidim_arrays.o volume_io/Volumes/.libs/output_mnc.o volume_io/Volumes/.libs/output_volume.o volume_io/Volumes/.libs/set_hyperslab.o volume_io/Volumes/.libs/volume_cache.o volume_io/Volumes/.libs/volumes.o -L/usr/local/lib -lhdf5 -lz -lnetcdf -lm -O2 -Wl,-soname -Wl,libvolume_io2.so.3 -o .libs/libvolume_io2.so.3.0.0 libtool: link: (cd ".libs" && rm -f "libvolume_io2.so.3" && ln -s "libvolume_io2.so.3.0.0" "libvolume_io2.so.3") libtool: link: (cd ".libs" && rm -f "libvolume_io2.so" && ln -s "libvolume_io2.so.3.0.0" "libvolume_io2.so") libtool: link: ar cru .libs/libvolume_io2.a volume_io/Geometry/colour.o volume_io/Geometry/colour_def.o volume_io/Geometry/gaussian.o volume_io/Geometry/inverse.o volume_io/Geometry/newton.o volume_io/Geometry/points.o volume_io/Geometry/splines.o volume_io/Geometry/tensors.o volume_io/Geometry/transforms.o volume_io/MNI_formats/gen_xf_io.o volume_io/MNI_formats/gen_xfs.o volume_io/MNI_formats/grid_transforms.o volume_io/MNI_formats/mni_io.o volume_io/MNI_formats/tag_points.o volume_io/MNI_formats/thin_plate_spline.o volume_io/Prog_utils/alloc.o volume_io/Prog_utils/alloc_check.o volume_io/Prog_utils/arrays.o volume_io/Prog_utils/files.o volume_io/Prog_utils/print.o volume_io/Prog_utils/progress.o volume_io/Prog_utils/string.o volume_io/Prog_utils/time.o volume_io/Volumes/evaluate.o volume_io/Volumes/get_hyperslab.o volume_io/Volumes/input_free.o volume_io/Volumes/input_mnc.o volume_io/Volumes/input_volume.o volume_io/Volumes/multidim_arrays.o volume_io/Volumes/output_mnc.o volume_io/Volumes/output_volume.o volume_io/Volumes/set_hyperslab.o volume_io/Volumes/volume_cache.o volume_io/Volumes/volumes.o libtool: link: ranlib .libs/libvolume_io2.a libtool: link: ( cd ".libs" && rm -f "libvolume_io2.la" && ln -s "../libvolume_io2.la" "libvolume_io2.la" ) depbase=`echo conversion/Acr_nema/acr_io.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/Acr_nema/acr_io.lo -MD -MP -MF $depbase.Tpo -c -o conversion/Acr_nema/acr_io.lo conversion/Acr_nema/acr_io.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/Acr_nema/acr_io.lo -MD -MP -MF conversion/Acr_nema/.deps/acr_io.Tpo -c conversion/Acr_nema/acr_io.c -fPIC -DPIC -o conversion/Acr_nema/.libs/acr_io.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/Acr_nema/acr_io.lo -MD -MP -MF conversion/Acr_nema/.deps/acr_io.Tpo -c conversion/Acr_nema/acr_io.c -o conversion/Acr_nema/acr_io.o >/dev/null 2>&1 depbase=`echo conversion/Acr_nema/dicom_client_routines.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/Acr_nema/dicom_client_routines.lo -MD -MP -MF $depbase.Tpo -c -o conversion/Acr_nema/dicom_client_routines.lo conversion/Acr_nema/dicom_client_routines.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/Acr_nema/dicom_client_routines.lo -MD -MP -MF conversion/Acr_nema/.deps/dicom_client_routines.Tpo -c conversion/Acr_nema/dicom_client_routines.c -fPIC -DPIC -o conversion/Acr_nema/.libs/dicom_client_routines.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/Acr_nema/dicom_client_routines.lo -MD -MP -MF conversion/Acr_nema/.deps/dicom_client_routines.Tpo -c conversion/Acr_nema/dicom_client_routines.c -o conversion/Acr_nema/dicom_client_routines.o >/dev/null 2>&1 depbase=`echo conversion/Acr_nema/dicom_network.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/Acr_nema/dicom_network.lo -MD -MP -MF $depbase.Tpo -c -o conversion/Acr_nema/dicom_network.lo conversion/Acr_nema/dicom_network.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include 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conversion/Acr_nema/element.lo -MD -MP -MF $depbase.Tpo -c -o conversion/Acr_nema/element.lo conversion/Acr_nema/element.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/Acr_nema/element.lo -MD -MP -MF conversion/Acr_nema/.deps/element.Tpo -c conversion/Acr_nema/element.c -fPIC -DPIC -o conversion/Acr_nema/.libs/element.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/Acr_nema/element.lo -MD -MP -MF conversion/Acr_nema/.deps/element.Tpo -c conversion/Acr_nema/element.c -o conversion/Acr_nema/element.o >/dev/null 2>&1 depbase=`echo conversion/Acr_nema/file_io.lo | sed 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-MD -MP -MF conversion/Acr_nema/.deps/globals.Tpo -c conversion/Acr_nema/globals.c -fPIC -DPIC -o conversion/Acr_nema/.libs/globals.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/Acr_nema/globals.lo -MD -MP -MF conversion/Acr_nema/.deps/globals.Tpo -c conversion/Acr_nema/globals.c -o conversion/Acr_nema/globals.o >/dev/null 2>&1 depbase=`echo conversion/Acr_nema/group.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/Acr_nema/group.lo -MD -MP -MF $depbase.Tpo -c -o conversion/Acr_nema/group.lo conversion/Acr_nema/group.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/Acr_nema/group.lo -MD -MP -MF conversion/Acr_nema/.deps/group.Tpo -c conversion/Acr_nema/group.c -fPIC -DPIC -o conversion/Acr_nema/.libs/group.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/Acr_nema/group.lo -MD -MP -MF conversion/Acr_nema/.deps/group.Tpo -c conversion/Acr_nema/group.c -o conversion/Acr_nema/group.o >/dev/null 2>&1 depbase=`echo conversion/Acr_nema/message.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include 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conversion/Acr_nema/message.c -o conversion/Acr_nema/message.o >/dev/null 2>&1 depbase=`echo conversion/Acr_nema/value_repr.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/Acr_nema/value_repr.lo -MD -MP -MF $depbase.Tpo -c -o conversion/Acr_nema/value_repr.lo conversion/Acr_nema/value_repr.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/Acr_nema/value_repr.lo -MD -MP -MF conversion/Acr_nema/.deps/value_repr.Tpo -c conversion/Acr_nema/value_repr.c -fPIC -DPIC -o conversion/Acr_nema/.libs/value_repr.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/Acr_nema/value_repr.lo -MD -MP -MF conversion/Acr_nema/.deps/value_repr.Tpo -c conversion/Acr_nema/value_repr.c -o conversion/Acr_nema/value_repr.o >/dev/null 2>&1 /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o libacr_nema.la conversion/Acr_nema/acr_io.lo conversion/Acr_nema/dicom_client_routines.lo conversion/Acr_nema/dicom_network.lo conversion/Acr_nema/element.lo conversion/Acr_nema/file_io.lo conversion/Acr_nema/globals.lo conversion/Acr_nema/group.lo conversion/Acr_nema/message.lo conversion/Acr_nema/value_repr.lo -lhdf5 -lz -lnetcdf -lm libtool: link: ar cru .libs/libacr_nema.a conversion/Acr_nema/.libs/acr_io.o conversion/Acr_nema/.libs/dicom_client_routines.o conversion/Acr_nema/.libs/dicom_network.o conversion/Acr_nema/.libs/element.o conversion/Acr_nema/.libs/file_io.o conversion/Acr_nema/.libs/globals.o conversion/Acr_nema/.libs/group.o conversion/Acr_nema/.libs/message.o conversion/Acr_nema/.libs/value_repr.o libtool: link: ranlib .libs/libacr_nema.a libtool: link: ( cd ".libs" && rm -f "libacr_nema.la" && ln -s "../libacr_nema.la" "libacr_nema.la" ) depbase=`echo progs/coordinates/voxeltoworld.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/coordinates/voxeltoworld.o -MD -MP -MF $depbase.Tpo -c -o progs/coordinates/voxeltoworld.o progs/coordinates/voxeltoworld.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o voxeltoworld progs/coordinates/voxeltoworld.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/voxeltoworld progs/coordinates/voxeltoworld.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/coordinates/worldtovoxel.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/coordinates/worldtovoxel.o -MD -MP -MF $depbase.Tpo -c -o progs/coordinates/worldtovoxel.o progs/coordinates/worldtovoxel.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o worldtovoxel progs/coordinates/worldtovoxel.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/worldtovoxel progs/coordinates/worldtovoxel.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/minc_modify_header/minc_modify_header.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/minc_modify_header/minc_modify_header.o -MD -MP -MF $depbase.Tpo -c -o progs/minc_modify_header/minc_modify_header.o progs/minc_modify_header/minc_modify_header.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o minc_modify_header progs/minc_modify_header/minc_modify_header.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/minc_modify_header progs/minc_modify_header/minc_modify_header.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincaverage/mincaverage.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincaverage/mincaverage.o -MD -MP -MF $depbase.Tpo -c -o progs/mincaverage/mincaverage.o progs/mincaverage/mincaverage.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o mincaverage progs/mincaverage/mincaverage.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/mincaverage progs/mincaverage/mincaverage.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincblob/mincblob.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincblob/mincblob.o -MD -MP -MF $depbase.Tpo -c -o progs/mincblob/mincblob.o progs/mincblob/mincblob.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o mincblob progs/mincblob/mincblob.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/mincblob progs/mincblob/mincblob.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -Iprogs/minccalc -I./progs/minccalc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/minccalc/minccalc-minccalc.o -MD -MP -MF progs/minccalc/.deps/minccalc-minccalc.Tpo -c -o progs/minccalc/minccalc-minccalc.o `test -f 'progs/minccalc/minccalc.c' || echo './'`progs/minccalc/minccalc.c mv -f progs/minccalc/.deps/minccalc-minccalc.Tpo progs/minccalc/.deps/minccalc-minccalc.Po /bin/sh ./ac_config_aux/ylwrap progs/minccalc/gram.y y.tab.c progs/minccalc/gram.c y.tab.h `echo progs/minccalc/gram.c | sed -e s/cc$/hh/ -e s/cpp$/hpp/ -e s/cxx$/hxx/ -e s/c++$/h++/ -e s/c$/h/` y.output progs/minccalc/gram.output -- bison -y -d --debug conflicts: 111 shift/reduce updating progs/minccalc/gram.h cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -Iprogs/minccalc -I./progs/minccalc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/minccalc/minccalc-gram.o -MD -MP -MF progs/minccalc/.deps/minccalc-gram.Tpo -c -o progs/minccalc/minccalc-gram.o `test -f 'progs/minccalc/gram.c' || echo './'`progs/minccalc/gram.c mv -f progs/minccalc/.deps/minccalc-gram.Tpo progs/minccalc/.deps/minccalc-gram.Po cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -Iprogs/minccalc -I./progs/minccalc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/minccalc/minccalc-eval.o -MD -MP -MF progs/minccalc/.deps/minccalc-eval.Tpo -c -o progs/minccalc/minccalc-eval.o `test -f 'progs/minccalc/eval.c' || echo './'`progs/minccalc/eval.c mv -f progs/minccalc/.deps/minccalc-eval.Tpo progs/minccalc/.deps/minccalc-eval.Po cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -Iprogs/minccalc -I./progs/minccalc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/minccalc/minccalc-ident.o -MD -MP -MF progs/minccalc/.deps/minccalc-ident.Tpo -c -o progs/minccalc/minccalc-ident.o `test -f 'progs/minccalc/ident.c' || echo './'`progs/minccalc/ident.c mv -f progs/minccalc/.deps/minccalc-ident.Tpo progs/minccalc/.deps/minccalc-ident.Po cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -Iprogs/minccalc -I./progs/minccalc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/minccalc/minccalc-lex.o -MD -MP -MF progs/minccalc/.deps/minccalc-lex.Tpo -c -o progs/minccalc/minccalc-lex.o `test -f 'progs/minccalc/lex.c' || echo './'`progs/minccalc/lex.c mv -f progs/minccalc/.deps/minccalc-lex.Tpo progs/minccalc/.deps/minccalc-lex.Po cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -Iprogs/minccalc -I./progs/minccalc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/minccalc/minccalc-node.o -MD -MP -MF progs/minccalc/.deps/minccalc-node.Tpo -c -o progs/minccalc/minccalc-node.o `test -f 'progs/minccalc/node.c' || echo './'`progs/minccalc/node.c mv -f progs/minccalc/.deps/minccalc-node.Tpo progs/minccalc/.deps/minccalc-node.Po cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -Iprogs/minccalc -I./progs/minccalc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/minccalc/minccalc-optim.o -MD -MP -MF progs/minccalc/.deps/minccalc-optim.Tpo -c -o progs/minccalc/minccalc-optim.o `test -f 'progs/minccalc/optim.c' || echo './'`progs/minccalc/optim.c mv -f progs/minccalc/.deps/minccalc-optim.Tpo progs/minccalc/.deps/minccalc-optim.Po cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -Iprogs/minccalc -I./progs/minccalc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/minccalc/minccalc-scalar.o -MD -MP -MF progs/minccalc/.deps/minccalc-scalar.Tpo -c -o progs/minccalc/minccalc-scalar.o `test -f 'progs/minccalc/scalar.c' || echo './'`progs/minccalc/scalar.c mv -f progs/minccalc/.deps/minccalc-scalar.Tpo progs/minccalc/.deps/minccalc-scalar.Po cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -Iprogs/minccalc -I./progs/minccalc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/minccalc/minccalc-sym.o -MD -MP -MF progs/minccalc/.deps/minccalc-sym.Tpo -c -o progs/minccalc/minccalc-sym.o `test -f 'progs/minccalc/sym.c' || echo './'`progs/minccalc/sym.c mv -f progs/minccalc/.deps/minccalc-sym.Tpo progs/minccalc/.deps/minccalc-sym.Po cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -Iprogs/minccalc -I./progs/minccalc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/minccalc/minccalc-vector.o -MD -MP -MF progs/minccalc/.deps/minccalc-vector.Tpo -c -o progs/minccalc/minccalc-vector.o `test -f 'progs/minccalc/vector.c' || echo './'`progs/minccalc/vector.c mv -f progs/minccalc/.deps/minccalc-vector.Tpo progs/minccalc/.deps/minccalc-vector.Po /bin/sh ./libtool --tag=CC --mode=link cc -Iprogs/minccalc -I./progs/minccalc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o minccalc progs/minccalc/minccalc-minccalc.o progs/minccalc/minccalc-gram.o progs/minccalc/minccalc-eval.o progs/minccalc/minccalc-ident.o progs/minccalc/minccalc-lex.o progs/minccalc/minccalc-node.o progs/minccalc/minccalc-optim.o progs/minccalc/minccalc-scalar.o progs/minccalc/minccalc-sym.o progs/minccalc/minccalc-vector.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -Iprogs/minccalc -I./progs/minccalc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/minccalc progs/minccalc/minccalc-minccalc.o progs/minccalc/minccalc-gram.o progs/minccalc/minccalc-eval.o progs/minccalc/minccalc-ident.o progs/minccalc/minccalc-lex.o progs/minccalc/minccalc-node.o progs/minccalc/minccalc-optim.o progs/minccalc/minccalc-scalar.o progs/minccalc/minccalc-sym.o progs/minccalc/minccalc-vector.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/minccmp/minccmp.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/minccmp/minccmp.o -MD -MP -MF $depbase.Tpo -c -o progs/minccmp/minccmp.o progs/minccmp/minccmp.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o minccmp progs/minccmp/minccmp.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/minccmp progs/minccmp/minccmp.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincconcat/mincconcat.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincconcat/mincconcat.o -MD -MP -MF $depbase.Tpo -c -o progs/mincconcat/mincconcat.o progs/mincconcat/mincconcat.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o mincconcat progs/mincconcat/mincconcat.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/mincconcat progs/mincconcat/mincconcat.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/minccopy/minccopy.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/minccopy/minccopy.o -MD -MP -MF $depbase.Tpo -c -o progs/minccopy/minccopy.o progs/minccopy/minccopy.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o minccopy progs/minccopy/minccopy.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/minccopy progs/minccopy/minccopy.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincexpand/mincexpand.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincexpand/mincexpand.o -MD -MP -MF $depbase.Tpo -c -o progs/mincexpand/mincexpand.o progs/mincexpand/mincexpand.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o mincexpand progs/mincexpand/mincexpand.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/mincexpand progs/mincexpand/mincexpand.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincextract/mincextract.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincextract/mincextract.o -MD -MP -MF $depbase.Tpo -c -o progs/mincextract/mincextract.o progs/mincextract/mincextract.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o mincextract progs/mincextract/mincextract.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/mincextract progs/mincextract/mincextract.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincgen/escapes.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincgen/escapes.o -MD -MP -MF $depbase.Tpo -c -o progs/mincgen/escapes.o progs/mincgen/escapes.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo progs/mincgen/genlib.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincgen/genlib.o -MD -MP -MF $depbase.Tpo -c -o progs/mincgen/genlib.o progs/mincgen/genlib.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo progs/mincgen/getfill.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincgen/getfill.o -MD -MP -MF $depbase.Tpo -c -o progs/mincgen/getfill.o progs/mincgen/getfill.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo progs/mincgen/init.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincgen/init.o -MD -MP -MF $depbase.Tpo -c -o progs/mincgen/init.o progs/mincgen/init.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo progs/mincgen/load.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincgen/load.o -MD -MP -MF $depbase.Tpo -c -o progs/mincgen/load.o progs/mincgen/load.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo progs/mincgen/main.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincgen/main.o -MD -MP -MF $depbase.Tpo -c -o progs/mincgen/main.o progs/mincgen/main.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./ac_config_aux/ylwrap progs/mincgen/ncgentab.y y.tab.c progs/mincgen/ncgentab.c y.tab.h `echo progs/mincgen/ncgentab.c | sed -e s/cc$/hh/ -e s/cpp$/hpp/ -e s/cxx$/hxx/ -e s/c++$/h++/ -e s/c$/h/` y.output progs/mincgen/ncgentab.output -- bison -y -d --debug conflicts: 1 shift/reduce updating progs/mincgen/ncgentab.h depbase=`echo progs/mincgen/ncgentab.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincgen/ncgentab.o -MD -MP -MF $depbase.Tpo -c -o progs/mincgen/ncgentab.o progs/mincgen/ncgentab.c &&\ mv -f $depbase.Tpo $depbase.Po progs/mincgen/ncgentab.c: In function 'yyparse': progs/mincgen/ncgentab.c:795:16: warning: implicit declaration of function 'yylex' [-Wimplicit-function-declaration] # define YYLEX yylex () ^ progs/mincgen/ncgentab.c:1446:16: note: in expansion of macro 'YYLEX' yychar = YYLEX; ^ progs/mincgen/ncgentab.c:2345:7: warning: implicit declaration of function 'yyerror' [-Wimplicit-function-declaration] yyerror (YY_("syntax error")); ^ /bin/sh ./ac_config_aux/ylwrap progs/mincgen/ncgenyy.l lex.yy.c progs/mincgen/ncgenyy.c -- flex depbase=`echo progs/mincgen/ncgenyy.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincgen/ncgenyy.o -MD -MP -MF $depbase.Tpo -c -o progs/mincgen/ncgenyy.o progs/mincgen/ncgenyy.c &&\ mv -f $depbase.Tpo $depbase.Po progs/mincgen/ncgenyy.l: In function 'yylex': progs/mincgen/ncgenyy.l:59:5: warning: implicit declaration of function 'yyerror' [-Wimplicit-function-declaration] yyerror("string too long, truncated\n"); ^ progs/mincgen/ncgenyy.l:131:17: warning: implicit declaration of function 'lookup' [-Wimplicit-function-declaration] if ((yylval = lookup((char *)yytext)) == YYLVAL_NULL) { ^ progs/mincgen/ncgenyy.l:31:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] #define YYLVAL_NULL ((YYSTYPE) NULL) ^ progs/mincgen/ncgenyy.l:131:44: note: in expansion of macro 'YYLVAL_NULL' if ((yylval = lookup((char *)yytext)) == YYLVAL_NULL) { ^ progs/mincgen/ncgenyy.l:132:13: warning: implicit declaration of function 'install' [-Wimplicit-function-declaration] yylval = install((char *)yytext); ^ /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o mincgen progs/mincgen/escapes.o progs/mincgen/genlib.o progs/mincgen/getfill.o progs/mincgen/init.o progs/mincgen/load.o progs/mincgen/main.o progs/mincgen/ncgentab.o progs/mincgen/ncgenyy.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/mincgen progs/mincgen/escapes.o progs/mincgen/genlib.o progs/mincgen/getfill.o progs/mincgen/init.o progs/mincgen/load.o progs/mincgen/main.o progs/mincgen/ncgentab.o progs/mincgen/ncgenyy.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincinfo/mincinfo.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincinfo/mincinfo.o -MD -MP -MF $depbase.Tpo -c -o progs/mincinfo/mincinfo.o progs/mincinfo/mincinfo.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o mincinfo progs/mincinfo/mincinfo.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/mincinfo progs/mincinfo/mincinfo.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/minclookup/minclookup.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/minclookup/minclookup.o -MD -MP -MF $depbase.Tpo -c -o progs/minclookup/minclookup.o progs/minclookup/minclookup.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o minclookup progs/minclookup/minclookup.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/minclookup progs/minclookup/minclookup.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincmakescalar/mincmakescalar.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincmakescalar/mincmakescalar.o -MD -MP -MF $depbase.Tpo -c -o progs/mincmakescalar/mincmakescalar.o progs/mincmakescalar/mincmakescalar.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o mincmakescalar progs/mincmakescalar/mincmakescalar.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/mincmakescalar progs/mincmakescalar/mincmakescalar.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincmakevector/mincmakevector.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincmakevector/mincmakevector.o -MD -MP -MF $depbase.Tpo -c -o progs/mincmakevector/mincmakevector.o progs/mincmakevector/mincmakevector.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o mincmakevector progs/mincmakevector/mincmakevector.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/mincmakevector progs/mincmakevector/mincmakevector.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincmath/mincmath.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincmath/mincmath.o -MD -MP -MF $depbase.Tpo -c -o progs/mincmath/mincmath.o progs/mincmath/mincmath.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o mincmath progs/mincmath/mincmath.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/mincmath progs/mincmath/mincmath.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -Iprogs/mincmorph -I./progs/mincmorph -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincmorph/mincmorph-mincmorph.o -MD -MP -MF progs/mincmorph/.deps/mincmorph-mincmorph.Tpo -c -o progs/mincmorph/mincmorph-mincmorph.o `test -f 'progs/mincmorph/mincmorph.c' || echo './'`progs/mincmorph/mincmorph.c mv -f progs/mincmorph/.deps/mincmorph-mincmorph.Tpo progs/mincmorph/.deps/mincmorph-mincmorph.Po cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -Iprogs/mincmorph -I./progs/mincmorph -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincmorph/mincmorph-kernel_io.o -MD -MP -MF progs/mincmorph/.deps/mincmorph-kernel_io.Tpo -c -o progs/mincmorph/mincmorph-kernel_io.o `test -f 'progs/mincmorph/kernel_io.c' || echo './'`progs/mincmorph/kernel_io.c mv -f progs/mincmorph/.deps/mincmorph-kernel_io.Tpo progs/mincmorph/.deps/mincmorph-kernel_io.Po cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -Iprogs/mincmorph -I./progs/mincmorph -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincmorph/mincmorph-kernel_ops.o -MD -MP -MF progs/mincmorph/.deps/mincmorph-kernel_ops.Tpo -c -o progs/mincmorph/mincmorph-kernel_ops.o `test -f 'progs/mincmorph/kernel_ops.c' || echo './'`progs/mincmorph/kernel_ops.c mv -f progs/mincmorph/.deps/mincmorph-kernel_ops.Tpo progs/mincmorph/.deps/mincmorph-kernel_ops.Po /bin/sh ./libtool --tag=CC --mode=link cc -Iprogs/mincmorph -I./progs/mincmorph -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o mincmorph progs/mincmorph/mincmorph-mincmorph.o progs/mincmorph/mincmorph-kernel_io.o progs/mincmorph/mincmorph-kernel_ops.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -Iprogs/mincmorph -I./progs/mincmorph -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/mincmorph progs/mincmorph/mincmorph-mincmorph.o progs/mincmorph/mincmorph-kernel_io.o progs/mincmorph/mincmorph-kernel_ops.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincresample/mincresample.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincresample/mincresample.o -MD -MP -MF $depbase.Tpo -c -o progs/mincresample/mincresample.o progs/mincresample/mincresample.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo progs/mincresample/resample_volumes.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincresample/resample_volumes.o -MD -MP -MF $depbase.Tpo -c -o progs/mincresample/resample_volumes.o progs/mincresample/resample_volumes.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo progs/Proglib/convert_origin_to_start.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/Proglib/convert_origin_to_start.o -MD -MP -MF $depbase.Tpo -c -o progs/Proglib/convert_origin_to_start.o progs/Proglib/convert_origin_to_start.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o mincresample progs/mincresample/mincresample.o progs/mincresample/resample_volumes.o progs/Proglib/convert_origin_to_start.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/mincresample progs/mincresample/mincresample.o progs/mincresample/resample_volumes.o progs/Proglib/convert_origin_to_start.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincreshape/mincreshape.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincreshape/mincreshape.o -MD -MP -MF $depbase.Tpo -c -o progs/mincreshape/mincreshape.o progs/mincreshape/mincreshape.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo progs/mincreshape/copy_data.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincreshape/copy_data.o -MD -MP -MF $depbase.Tpo -c -o progs/mincreshape/copy_data.o progs/mincreshape/copy_data.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o mincreshape progs/mincreshape/mincreshape.o progs/mincreshape/copy_data.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/mincreshape progs/mincreshape/mincreshape.o progs/mincreshape/copy_data.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -Iprogs/mincsample -I./progs/mincsample -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincsample/mincsample-mincsample.o -MD -MP -MF progs/mincsample/.deps/mincsample-mincsample.Tpo -c -o progs/mincsample/mincsample-mincsample.o `test -f 'progs/mincsample/mincsample.c' || echo './'`progs/mincsample/mincsample.c mv -f progs/mincsample/.deps/mincsample-mincsample.Tpo progs/mincsample/.deps/mincsample-mincsample.Po cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -Iprogs/mincsample -I./progs/mincsample -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincsample/mincsample-mt19937ar.o -MD -MP -MF progs/mincsample/.deps/mincsample-mt19937ar.Tpo -c -o progs/mincsample/mincsample-mt19937ar.o `test -f 'progs/mincsample/mt19937ar.c' || echo './'`progs/mincsample/mt19937ar.c mv -f progs/mincsample/.deps/mincsample-mt19937ar.Tpo progs/mincsample/.deps/mincsample-mt19937ar.Po /bin/sh ./libtool --tag=CC --mode=link cc -Iprogs/mincsample -I./progs/mincsample -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o mincsample progs/mincsample/mincsample-mincsample.o progs/mincsample/mincsample-mt19937ar.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -Iprogs/mincsample -I./progs/mincsample -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/mincsample progs/mincsample/mincsample-mincsample.o progs/mincsample/mincsample-mt19937ar.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincstats/mincstats.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincstats/mincstats.o -MD -MP -MF $depbase.Tpo -c -o progs/mincstats/mincstats.o progs/mincstats/mincstats.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o mincstats progs/mincstats/mincstats.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/mincstats progs/mincstats/mincstats.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/minctoraw/minctoraw.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/minctoraw/minctoraw.o -MD -MP -MF $depbase.Tpo -c -o progs/minctoraw/minctoraw.o progs/minctoraw/minctoraw.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o minctoraw progs/minctoraw/minctoraw.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/minctoraw progs/minctoraw/minctoraw.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincview/invert_raw_image.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincview/invert_raw_image.o -MD -MP -MF $depbase.Tpo -c -o progs/mincview/invert_raw_image.o progs/mincview/invert_raw_image.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o invert_raw_image progs/mincview/invert_raw_image.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/invert_raw_image progs/mincview/invert_raw_image.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincwindow/mincwindow.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincwindow/mincwindow.o -MD -MP -MF $depbase.Tpo -c -o progs/mincwindow/mincwindow.o progs/mincwindow/mincwindow.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o mincwindow progs/mincwindow/mincwindow.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/mincwindow progs/mincwindow/mincwindow.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/rawtominc/rawtominc.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/rawtominc/rawtominc.o -MD -MP -MF $depbase.Tpo -c -o progs/rawtominc/rawtominc.o progs/rawtominc/rawtominc.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o rawtominc progs/rawtominc/rawtominc.o progs/Proglib/convert_origin_to_start.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/rawtominc progs/rawtominc/rawtominc.o progs/Proglib/convert_origin_to_start.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/xfm/transformtags.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/xfm/transformtags.o -MD -MP -MF $depbase.Tpo -c -o progs/xfm/transformtags.o progs/xfm/transformtags.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o transformtags progs/xfm/transformtags.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/transformtags progs/xfm/transformtags.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/xfm/xfm2def.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/xfm/xfm2def.o -MD -MP -MF $depbase.Tpo -c -o progs/xfm/xfm2def.o progs/xfm/xfm2def.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o xfm2def progs/xfm/xfm2def.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/xfm2def progs/xfm/xfm2def.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/xfm/xfmconcat.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/xfm/xfmconcat.o -MD -MP -MF $depbase.Tpo -c -o progs/xfm/xfmconcat.o progs/xfm/xfmconcat.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o xfmconcat progs/xfm/xfmconcat.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/xfmconcat progs/xfm/xfmconcat.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/xfm/xfminvert.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/xfm/xfminvert.o -MD -MP -MF $depbase.Tpo -c -o progs/xfm/xfminvert.o progs/xfm/xfminvert.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o xfminvert progs/xfm/xfminvert.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/xfminvert progs/xfm/xfminvert.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincconvert/mincconvert.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincconvert/mincconvert.o -MD -MP -MF $depbase.Tpo -c -o progs/mincconvert/mincconvert.o progs/mincconvert/mincconvert.c &&\ mv -f $depbase.Tpo $depbase.Po progs/mincconvert/mincconvert.c: In function 'main': progs/mincconvert/mincconvert.c:214:14: warning: implicit declaration of function 'micreatex' [-Wimplicit-function-declaration] new_fd = micreatex(new_fname, flags, &opts); ^ /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o mincconvert progs/mincconvert/mincconvert.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/mincconvert progs/mincconvert/mincconvert.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincdump/mincdump.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincdump/mincdump.o -MD -MP -MF $depbase.Tpo -c -o progs/mincdump/mincdump.o progs/mincdump/mincdump.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo progs/mincdump/vardata.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincdump/vardata.o -MD -MP -MF $depbase.Tpo -c -o progs/mincdump/vardata.o progs/mincdump/vardata.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo progs/mincdump/dumplib.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincdump/dumplib.o -MD -MP -MF $depbase.Tpo -c -o progs/mincdump/dumplib.o progs/mincdump/dumplib.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o mincdump progs/mincdump/mincdump.o progs/mincdump/vardata.o progs/mincdump/dumplib.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/mincdump progs/mincdump/mincdump.o progs/mincdump/vardata.o progs/mincdump/dumplib.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo conversion/ecattominc/ecattominc.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/ecattominc/ecattominc.o -MD -MP -MF $depbase.Tpo -c -o conversion/ecattominc/ecattominc.o conversion/ecattominc/ecattominc.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo conversion/ecattominc/insertblood.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/ecattominc/insertblood.o -MD -MP -MF $depbase.Tpo -c -o conversion/ecattominc/insertblood.o conversion/ecattominc/insertblood.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo conversion/ecattominc/ecat_file.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/ecattominc/ecat_file.o -MD -MP -MF $depbase.Tpo -c -o conversion/ecattominc/ecat_file.o conversion/ecattominc/ecat_file.c &&\ mv -f $depbase.Tpo $depbase.Po conversion/ecattominc/ecat_file.c: In function 'get_dirblock': conversion/ecattominc/ecat_file.c:1025:7: warning: implicit declaration of function 'get_int32_value' [-Wimplicit-function-declaration] get_int32_value(&dirblock[offset], &value); ^ depbase=`echo conversion/ecattominc/machine_indep.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/ecattominc/machine_indep.o -MD -MP -MF $depbase.Tpo -c -o conversion/ecattominc/machine_indep.o conversion/ecattominc/machine_indep.c &&\ mv -f $depbase.Tpo $depbase.Po conversion/ecattominc/machine_indep.c: In function 'get_short_value': conversion/ecattominc/machine_indep.c:20:22: warning: implicit declaration of function 'ntohs' [-Wimplicit-function-declaration] *(short int *)to = ntohs(short_value); ^ conversion/ecattominc/machine_indep.c: In function 'get_long_value': conversion/ecattominc/machine_indep.c:27:21: warning: implicit declaration of function 'ntohl' [-Wimplicit-function-declaration] *(long int *)to = ntohl(long_value); ^ /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o ecattominc conversion/ecattominc/ecattominc.o conversion/ecattominc/insertblood.o conversion/ecattominc/ecat_file.o conversion/ecattominc/machine_indep.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/ecattominc conversion/ecattominc/ecattominc.o conversion/ecattominc/insertblood.o conversion/ecattominc/ecat_file.o conversion/ecattominc/machine_indep.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo conversion/minctoecat/minctoecat.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/minctoecat/minctoecat.o -MD -MP -MF $depbase.Tpo -c -o conversion/minctoecat/minctoecat.o conversion/minctoecat/minctoecat.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo conversion/minctoecat/ecat_write.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/minctoecat/ecat_write.o -MD -MP -MF $depbase.Tpo -c -o conversion/minctoecat/ecat_write.o conversion/minctoecat/ecat_write.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo conversion/minctoecat/machine_indep.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/minctoecat/machine_indep.o -MD -MP -MF $depbase.Tpo -c -o conversion/minctoecat/machine_indep.o conversion/minctoecat/machine_indep.c &&\ mv -f $depbase.Tpo $depbase.Po conversion/minctoecat/machine_indep.c: In function 'SWAB': conversion/minctoecat/machine_indep.c:28:6: warning: implicit declaration of function 'ntohs' [-Wimplicit-function-declaration] if (ntohs(1) == 1) swab(from, to, length); ^ conversion/minctoecat/machine_indep.c: In function 'SWAW': conversion/minctoecat/machine_indep.c:41:21: warning: implicit declaration of function 'swaw' [-Wimplicit-function-declaration] if (ntohs(1) == 1) swaw((short*)from,to,length); ^ conversion/minctoecat/machine_indep.c: At top level: conversion/minctoecat/machine_indep.c:184:1: warning: return type defaults to 'int' [-Wimplicit-int] read_matrix_data( fptr, strtblk, nblks, dptr, dtype) ^ conversion/minctoecat/machine_indep.c: In function 'read_matrix_data': conversion/minctoecat/machine_indep.c:191:8: warning: implicit declaration of function 'mat_rblk' [-Wimplicit-function-declaration] err = mat_rblk( fptr, strtblk, dptr, nblks); ^ conversion/minctoecat/machine_indep.c: At top level: conversion/minctoecat/machine_indep.c:196:1: warning: return type defaults to 'int' [-Wimplicit-int] write_matrix_data( fptr, strtblk, nblks, dptr, dtype) ^ conversion/minctoecat/machine_indep.c: In function 'write_matrix_data': conversion/minctoecat/machine_indep.c:215:8: warning: implicit declaration of function 'mat_wblk' [-Wimplicit-function-declaration] if ( mat_wblk( fptr, strtblk, dptr, nblks) < 0) error_flag++; ^ /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o minctoecat conversion/minctoecat/minctoecat.o conversion/minctoecat/ecat_write.o conversion/minctoecat/machine_indep.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/minctoecat conversion/minctoecat/minctoecat.o conversion/minctoecat/ecat_write.o conversion/minctoecat/machine_indep.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo conversion/nifti1/mnc2nii.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/nifti1/mnc2nii.o -MD -MP -MF $depbase.Tpo -c -o conversion/nifti1/mnc2nii.o conversion/nifti1/mnc2nii.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo conversion/nifti1/nifti1_io.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/nifti1/nifti1_io.o -MD -MP -MF $depbase.Tpo -c -o conversion/nifti1/nifti1_io.o conversion/nifti1/nifti1_io.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo conversion/nifti1/znzlib.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/nifti1/znzlib.o -MD -MP -MF $depbase.Tpo -c -o conversion/nifti1/znzlib.o conversion/nifti1/znzlib.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o mnc2nii conversion/nifti1/mnc2nii.o conversion/nifti1/nifti1_io.o conversion/nifti1/znzlib.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/mnc2nii conversion/nifti1/mnc2nii.o conversion/nifti1/nifti1_io.o conversion/nifti1/znzlib.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo conversion/nifti1/nii2mnc.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/nifti1/nii2mnc.o -MD -MP -MF $depbase.Tpo -c -o conversion/nifti1/nii2mnc.o conversion/nifti1/nii2mnc.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o nii2mnc conversion/nifti1/nii2mnc.o conversion/nifti1/nifti1_io.o conversion/nifti1/znzlib.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/nii2mnc conversion/nifti1/nii2mnc.o conversion/nifti1/nifti1_io.o conversion/nifti1/znzlib.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo conversion/micropet/upet2mnc.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/micropet/upet2mnc.o -MD -MP -MF $depbase.Tpo -c -o conversion/micropet/upet2mnc.o conversion/micropet/upet2mnc.c &&\ mv -f $depbase.Tpo $depbase.Po conversion/micropet/upet2mnc.c: In function 'upet_to_minc': conversion/micropet/upet2mnc.c:566:17: warning: implicit declaration of function 'isspace' [-Wimplicit-function-declaration] while (!isspace(*line_ptr)) { ^ conversion/micropet/upet2mnc.c: In function 'parse_time': conversion/micropet/upet2mnc.c:1077:12: warning: implicit declaration of function 'isdigit' [-Wimplicit-function-declaration] while (isdigit(*str_ptr)) { ^ /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o upet2mnc conversion/micropet/upet2mnc.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/upet2mnc conversion/micropet/upet2mnc.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo conversion/dcm2mnc/dcm2mnc.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/dcm2mnc/dcm2mnc.o -MD -MP -MF $depbase.Tpo -c -o conversion/dcm2mnc/dcm2mnc.o conversion/dcm2mnc/dcm2mnc.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo conversion/dcm2mnc/dicom_to_minc.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/dcm2mnc/dicom_to_minc.o -MD -MP -MF $depbase.Tpo -c -o conversion/dcm2mnc/dicom_to_minc.o conversion/dcm2mnc/dicom_to_minc.c &&\ mv -f $depbase.Tpo $depbase.Po conversion/dcm2mnc/dicom_to_minc.c: In function 'add_siemens_info': conversion/dcm2mnc/dicom_to_minc.c:1414:9: warning: implicit declaration of function 'is_numaris3' [-Wimplicit-function-declaration] if (is_numaris3(group_list)) { ^ depbase=`echo conversion/dcm2mnc/siemens_to_dicom.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/dcm2mnc/siemens_to_dicom.o -MD -MP -MF $depbase.Tpo -c -o conversion/dcm2mnc/siemens_to_dicom.o conversion/dcm2mnc/siemens_to_dicom.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo conversion/dcm2mnc/dicom_read.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/dcm2mnc/dicom_read.o -MD -MP -MF $depbase.Tpo -c -o conversion/dcm2mnc/dicom_read.o conversion/dcm2mnc/dicom_read.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo conversion/dcm2mnc/minc_file.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/dcm2mnc/minc_file.o -MD -MP -MF $depbase.Tpo -c -o conversion/dcm2mnc/minc_file.o conversion/dcm2mnc/minc_file.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo conversion/dcm2mnc/progress.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/dcm2mnc/progress.o -MD -MP -MF $depbase.Tpo -c -o conversion/dcm2mnc/progress.o conversion/dcm2mnc/progress.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo conversion/dcm2mnc/string_to_filename.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/dcm2mnc/string_to_filename.o -MD -MP -MF $depbase.Tpo -c -o conversion/dcm2mnc/string_to_filename.o conversion/dcm2mnc/string_to_filename.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o dcm2mnc conversion/dcm2mnc/dcm2mnc.o conversion/dcm2mnc/dicom_to_minc.o conversion/dcm2mnc/siemens_to_dicom.o conversion/dcm2mnc/dicom_read.o conversion/dcm2mnc/minc_file.o conversion/dcm2mnc/progress.o conversion/dcm2mnc/string_to_filename.o libacr_nema.la libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/dcm2mnc conversion/dcm2mnc/dcm2mnc.o conversion/dcm2mnc/dicom_to_minc.o conversion/dcm2mnc/siemens_to_dicom.o conversion/dcm2mnc/dicom_read.o conversion/dcm2mnc/minc_file.o conversion/dcm2mnc/progress.o conversion/dcm2mnc/string_to_filename.o -L/usr/local/lib ./.libs/libacr_nema.a ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo conversion/vff2mnc/vff2mnc.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT conversion/vff2mnc/vff2mnc.o -MD -MP -MF $depbase.Tpo -c -o conversion/vff2mnc/vff2mnc.o conversion/vff2mnc/vff2mnc.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o vff2mnc conversion/vff2mnc/vff2mnc.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/vff2mnc conversion/vff2mnc/vff2mnc.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincexample/mincexample1.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincexample/mincexample1.o -MD -MP -MF $depbase.Tpo -c -o progs/mincexample/mincexample1.o progs/mincexample/mincexample1.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o mincexample1 progs/mincexample/mincexample1.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/mincexample1 progs/mincexample/mincexample1.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib depbase=`echo progs/mincexample/mincexample2.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT progs/mincexample/mincexample2.o -MD -MP -MF $depbase.Tpo -c -o progs/mincexample/mincexample2.o progs/mincexample/mincexample2.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ./libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o mincexample2 progs/mincexample/mincexample2.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/mincexample2 progs/mincexample/mincexample2.o -L/usr/local/lib ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib /usr/local/bin/pod2man --section=1 progs/minccomplete/minccomplete > progs/minccomplete/minccomplete.man1 /usr/local/bin/pod2man --section=1 progs/minchistory/minchistory > progs/minchistory/minchistory.man1 /usr/local/bin/pod2man --section=1 progs/mincpik/mincpik > progs/mincpik/mincpik.man1 gmake[3]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00' Making all in volume_io gmake[3]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00/volume_io' Making all in Documentation gmake[4]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00/volume_io/Documentation' gmake[4]: Nothing to be done for 'all'. gmake[4]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00/volume_io/Documentation' Making all in Testing gmake[4]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00/volume_io/Testing' cc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc -I../../volume_io/Include -I../../volume_io/Include -I../../progs/Proglib -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT example_modify.o -MD -MP -MF .deps/example_modify.Tpo -c -o example_modify.o example_modify.c mv -f .deps/example_modify.Tpo .deps/example_modify.Po /bin/sh ../../libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o example_modify example_modify.o ../../libvolume_io2.la ../../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/example_modify example_modify.o -L/usr/local/lib ../../.libs/libvolume_io2.so ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib cc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc -I../../volume_io/Include -I../../volume_io/Include -I../../progs/Proglib -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT example_tags.o -MD -MP -MF .deps/example_tags.Tpo -c -o example_tags.o example_tags.c mv -f .deps/example_tags.Tpo .deps/example_tags.Po /bin/sh ../../libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o example_tags example_tags.o ../../libvolume_io2.la ../../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/example_tags example_tags.o -L/usr/local/lib ../../.libs/libvolume_io2.so ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib cc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc -I../../volume_io/Include -I../../volume_io/Include -I../../progs/Proglib -I/usr/local/include -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -MT example_volume_io.o -MD -MP -MF .deps/example_volume_io.Tpo -c -o example_volume_io.o example_volume_io.c mv -f .deps/example_volume_io.Tpo .deps/example_volume_io.Po /bin/sh ../../libtool --tag=CC --mode=link cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -L/usr/local/lib -o example_volume_io example_volume_io.o ../../libvolume_io2.la ../../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: cc -pipe -Wno-error=return-type -O2 -fno-strict-aliasing -o .libs/example_volume_io example_volume_io.o -L/usr/local/lib ../../.libs/libvolume_io2.so ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm -Wl,-rpath -Wl,/usr/local/lib gmake[4]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00/volume_io/Testing' gmake[4]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00/volume_io' gmake[4]: Nothing to be done for 'all-am'. gmake[4]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00/volume_io' gmake[3]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00/volume_io' Making all in testdir gmake[3]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00/testdir' cd . && chmod +x run_test_arg_parse.sh run_tests.sh run_test2.sh xfmconcat_01.sh xfmconcat_02.sh run_test_progs.sh gmake[3]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00/testdir' Making all in doc gmake[3]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00/doc' gmake[3]: Nothing to be done for 'all'. gmake[3]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00/doc' Making all in libsrc2/test gmake[3]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00/libsrc2/test' cd . && chmod +x testminctools.sh gmake[3]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00/libsrc2/test' gmake[2]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00' gmake[1]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00' =========================================================================== =================================================== ===> minc2-2.2.00_4,1 depends on executable: bash - not found ===> Installing existing package /packages/All/bash-4.3.46_1.txz Installing bash-4.3.46_1... Extracting bash-4.3.46_1: .......... done ===> minc2-2.2.00_4,1 depends on executable: bash - found ===> Returning to build of minc2-2.2.00_4,1 ===> minc2-2.2.00_4,1 depends on package: perl5>=5.20<5.21 - found =========================================================================== =================================================== ===> Staging for minc2-2.2.00_4,1 ===> Generating temporary packing list gmake[1]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00' if test -z 'strip'; then \ gmake INSTALL_PROGRAM="/bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s" \ install_sh_PROGRAM="/bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s" INSTALL_STRIP_FLAG=-s \ install; \ else \ gmake INSTALL_PROGRAM="/bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s" \ install_sh_PROGRAM="/bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s" INSTALL_STRIP_FLAG=-s \ "INSTALL_PROGRAM_ENV=STRIPPROG='strip'" install; \ fi gmake[2]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00' Making install in . gmake[3]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00' gmake[4]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00' /bin/mkdir -p '/wrkdirs/science/minc2/stage/usr/local/lib' /bin/sh ./libtool --mode=install /usr/bin/install -c -s libminc2.la libvolume_io2.la '/wrkdirs/science/minc2/stage/usr/local/lib' libtool: install: /usr/bin/install -c .libs/libminc2.so.3.0.0 /wrkdirs/science/minc2/stage/usr/local/lib/libminc2.so.3.0.0 libtool: install: strip --strip-unneeded /wrkdirs/science/minc2/stage/usr/local/lib/libminc2.so.3.0.0 libtool: install: (cd /wrkdirs/science/minc2/stage/usr/local/lib && { ln -s -f libminc2.so.3.0.0 libminc2.so.3 || { rm -f libminc2.so.3 && ln -s libminc2.so.3.0.0 libminc2.so.3; }; }) libtool: install: (cd /wrkdirs/science/minc2/stage/usr/local/lib && { ln -s -f libminc2.so.3.0.0 libminc2.so || { rm -f libminc2.so && ln -s libminc2.so.3.0.0 libminc2.so; }; }) libtool: install: /usr/bin/install -c .libs/libminc2.lai /wrkdirs/science/minc2/stage/usr/local/lib/libminc2.la libtool: install: /usr/bin/install -c .libs/libvolume_io2.so.3.0.0 /wrkdirs/science/minc2/stage/usr/local/lib/libvolume_io2.so.3.0.0 libtool: install: strip --strip-unneeded /wrkdirs/science/minc2/stage/usr/local/lib/libvolume_io2.so.3.0.0 libtool: install: (cd /wrkdirs/science/minc2/stage/usr/local/lib && { ln -s -f libvolume_io2.so.3.0.0 libvolume_io2.so.3 || { rm -f libvolume_io2.so.3 && ln -s libvolume_io2.so.3.0.0 libvolume_io2.so.3; }; }) libtool: install: (cd /wrkdirs/science/minc2/stage/usr/local/lib && { ln -s -f libvolume_io2.so.3.0.0 libvolume_io2.so || { rm -f libvolume_io2.so && ln -s libvolume_io2.so.3.0.0 libvolume_io2.so; }; }) libtool: install: /usr/bin/install -c .libs/libvolume_io2.lai /wrkdirs/science/minc2/stage/usr/local/lib/libvolume_io2.la libtool: install: /usr/bin/install -c .libs/libminc2.a /wrkdirs/science/minc2/stage/usr/local/lib/libminc2.a libtool: install: strip --strip-debug /wrkdirs/science/minc2/stage/usr/local/lib/libminc2.a libtool: install: chmod 644 /wrkdirs/science/minc2/stage/usr/local/lib/libminc2.a libtool: install: ranlib /wrkdirs/science/minc2/stage/usr/local/lib/libminc2.a libtool: install: /usr/bin/install -c .libs/libvolume_io2.a /wrkdirs/science/minc2/stage/usr/local/lib/libvolume_io2.a libtool: install: strip --strip-debug /wrkdirs/science/minc2/stage/usr/local/lib/libvolume_io2.a libtool: install: chmod 644 /wrkdirs/science/minc2/stage/usr/local/lib/libvolume_io2.a libtool: install: ranlib /wrkdirs/science/minc2/stage/usr/local/lib/libvolume_io2.a libtool: warning: remember to run 'libtool --finish /usr/local/lib' /bin/mkdir -p '/wrkdirs/science/minc2/stage/usr/local/bin' STRIPPROG='strip' /bin/sh ./libtool --mode=install /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s voxeltoworld worldtovoxel minc_modify_header mincaverage mincblob minccalc minccmp mincconcat minccopy mincexpand mincextract mincgen mincinfo minclookup mincmakescalar mincmakevector mincmath mincmorph mincresample mincreshape mincsample mincstats minctoraw invert_raw_image mincwindow rawtominc transformtags xfm2def xfmconcat xfminvert mincconvert mincdump ecattominc minctoecat mnc2nii nii2mnc upet2mnc dcm2mnc vff2mnc '/wrkdirs/science/minc2/stage/usr/local/bin' libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/voxeltoworld /wrkdirs/science/minc2/stage/usr/local/bin/voxeltoworld libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/worldtovoxel /wrkdirs/science/minc2/stage/usr/local/bin/worldtovoxel libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/minc_modify_header /wrkdirs/science/minc2/stage/usr/local/bin/minc_modify_header libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/mincaverage /wrkdirs/science/minc2/stage/usr/local/bin/mincaverage libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/mincblob /wrkdirs/science/minc2/stage/usr/local/bin/mincblob libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/minccalc /wrkdirs/science/minc2/stage/usr/local/bin/minccalc libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/minccmp /wrkdirs/science/minc2/stage/usr/local/bin/minccmp libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/mincconcat /wrkdirs/science/minc2/stage/usr/local/bin/mincconcat libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/minccopy /wrkdirs/science/minc2/stage/usr/local/bin/minccopy libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/mincexpand /wrkdirs/science/minc2/stage/usr/local/bin/mincexpand libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/mincextract /wrkdirs/science/minc2/stage/usr/local/bin/mincextract libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/mincgen /wrkdirs/science/minc2/stage/usr/local/bin/mincgen libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/mincinfo /wrkdirs/science/minc2/stage/usr/local/bin/mincinfo libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/minclookup /wrkdirs/science/minc2/stage/usr/local/bin/minclookup libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/mincmakescalar /wrkdirs/science/minc2/stage/usr/local/bin/mincmakescalar libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/mincmakevector /wrkdirs/science/minc2/stage/usr/local/bin/mincmakevector libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/mincmath /wrkdirs/science/minc2/stage/usr/local/bin/mincmath libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/mincmorph /wrkdirs/science/minc2/stage/usr/local/bin/mincmorph libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/mincresample /wrkdirs/science/minc2/stage/usr/local/bin/mincresample libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/mincreshape /wrkdirs/science/minc2/stage/usr/local/bin/mincreshape libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/mincsample /wrkdirs/science/minc2/stage/usr/local/bin/mincsample libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/mincstats /wrkdirs/science/minc2/stage/usr/local/bin/mincstats libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/minctoraw /wrkdirs/science/minc2/stage/usr/local/bin/minctoraw libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/invert_raw_image /wrkdirs/science/minc2/stage/usr/local/bin/invert_raw_image libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/mincwindow /wrkdirs/science/minc2/stage/usr/local/bin/mincwindow libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/rawtominc /wrkdirs/science/minc2/stage/usr/local/bin/rawtominc libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/transformtags /wrkdirs/science/minc2/stage/usr/local/bin/transformtags libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/xfm2def /wrkdirs/science/minc2/stage/usr/local/bin/xfm2def libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/xfmconcat /wrkdirs/science/minc2/stage/usr/local/bin/xfmconcat libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/xfminvert /wrkdirs/science/minc2/stage/usr/local/bin/xfminvert libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/mincconvert /wrkdirs/science/minc2/stage/usr/local/bin/mincconvert libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/mincdump /wrkdirs/science/minc2/stage/usr/local/bin/mincdump libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/ecattominc /wrkdirs/science/minc2/stage/usr/local/bin/ecattominc libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/minctoecat /wrkdirs/science/minc2/stage/usr/local/bin/minctoecat libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/mnc2nii /wrkdirs/science/minc2/stage/usr/local/bin/mnc2nii libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/nii2mnc /wrkdirs/science/minc2/stage/usr/local/bin/nii2mnc libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/upet2mnc /wrkdirs/science/minc2/stage/usr/local/bin/upet2mnc libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/dcm2mnc /wrkdirs/science/minc2/stage/usr/local/bin/dcm2mnc libtool: warning: 'libvolume_io2.la' has not been installed in '/usr/local/lib' libtool: warning: 'libminc2.la' has not been installed in '/usr/local/lib' libtool: install: /bin/sh /wrkdirs/science/minc2/minc-release-2.2.00/ac_config_aux/install-sh -c -s .libs/vff2mnc /wrkdirs/science/minc2/stage/usr/local/bin/vff2mnc /bin/mkdir -p '/wrkdirs/science/minc2/stage/usr/local/bin' install -m 555 progs/minccomplete/minccomplete progs/minchistory/minchistory progs/mincpik/mincpik progs/xfm/xfmflip '/wrkdirs/science/minc2/stage/usr/local/bin' /bin/mkdir -p '/wrkdirs/science/minc2/stage/usr/local/bin' install -m 555 progs/mincdiff/mincdiff progs/mincedit/mincedit progs/mincheader/mincheader progs/mincview/mincview '/wrkdirs/science/minc2/stage/usr/local/bin' /bin/mkdir -p '/wrkdirs/science/minc2/stage/usr/local/include' install -m 0644 libsrc/minc.h libsrc/ParseArgv.h libsrc/voxel_loop.h libsrc/nd_loop.h libsrc/time_stamp.h libsrc/minc_compat.h volume_io/Include/volume_io.h libsrc2/minc2.h libsrc/minc_simple.h '/wrkdirs/science/minc2/stage/usr/local/include' /bin/mkdir -p '/wrkdirs/science/minc2/stage/usr/local/include/volume_io' install -m 0644 volume_io/Include/volume_io/alloc.h volume_io/Include/volume_io/arrays.h volume_io/Include/volume_io/basic.h volume_io/Include/volume_io/def_math.h volume_io/Include/volume_io/files.h volume_io/Include/volume_io/geom_structs.h volume_io/Include/volume_io/geometry.h volume_io/Include/internal_volume_io.h volume_io/Include/volume_io/multidim.h volume_io/Include/volume_io/progress.h volume_io/Include/volume_io/string_funcs.h volume_io/Include/volume_io/system_dependent.h volume_io/Include/volume_io/transforms.h volume_io/Include/volume_io/vol_io_prototypes.h volume_io/Include/volume_io/volume.h volume_io/Include/volume_io/volume_cache.h '/wrkdirs/science/minc2/stage/usr/local/include/volume_io' /bin/mkdir -p '/wrkdirs/science/minc2/stage/usr/local/man/man1' install -m 0644 'progs/coordinates/voxeltoworld.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/voxeltoworld.1' install -m 0644 'progs/minc_modify_header/minc_modify_header.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/minc_modify_header.1' install -m 0644 'progs/mincaverage/mincaverage.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/mincaverage.1' install -m 0644 'progs/mincblob/mincblob.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/mincblob.1' install -m 0644 'progs/minccalc/minccalc.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/minccalc.1' install -m 0644 'progs/minccomplete/minccomplete.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/minccomplete.1' install -m 0644 'progs/mincconcat/mincconcat.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/mincconcat.1' install -m 0644 'progs/minccmp/minccmp.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/minccmp.1' install -m 0644 'progs/minccopy/minccopy.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/minccopy.1' install -m 0644 'progs/mincdiff/mincdiff.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/mincdiff.1' install -m 0644 'progs/mincedit/mincedit.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/mincedit.1' install -m 0644 'progs/mincexpand/mincexpand.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/mincexpand.1' install -m 0644 'progs/mincextract/mincextract.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/mincextract.1' install -m 0644 'progs/mincgen/mincgen.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/mincgen.1' install -m 0644 'progs/mincheader/mincheader.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/mincheader.1' install -m 0644 'progs/minchistory/minchistory.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/minchistory.1' install -m 0644 'progs/mincinfo/mincinfo.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/mincinfo.1' install -m 0644 'progs/minclookup/minclookup.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/minclookup.1' install -m 0644 'progs/mincmakescalar/mincmakescalar.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/mincmakescalar.1' install -m 0644 'progs/mincmakevector/mincmakevector.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/mincmakevector.1' install -m 0644 'progs/mincmath/mincmath.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/mincmath.1' install -m 0644 'progs/mincpik/mincpik.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/mincpik.1' install -m 0644 'progs/mincresample/mincresample.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/mincresample.1' install -m 0644 'progs/mincreshape/mincreshape.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/mincreshape.1' install -m 0644 'progs/mincstats/mincstats.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/mincstats.1' install -m 0644 'progs/minctoraw/minctoraw.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/minctoraw.1' install -m 0644 'progs/mincview/invert_raw_image.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/invert_raw_image.1' install -m 0644 'progs/mincview/mincview.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/mincview.1' install -m 0644 'progs/mincwindow/mincwindow.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/mincwindow.1' install -m 0644 'progs/rawtominc/rawtominc.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/rawtominc.1' install -m 0644 'progs/xfm/transformtags.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/transformtags.1' install -m 0644 'progs/xfm/xfm2def.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/xfm2def.1' install -m 0644 'progs/xfm/xfmconcat.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/xfmconcat.1' install -m 0644 'progs/xfm/xfminvert.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/xfminvert.1' install -m 0644 'progs/xfm/xfmflip.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/xfmflip.1' install -m 0644 'progs/mincconvert/mincconvert.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/mincconvert.1' install -m 0644 'conversion/ecattominc/ecattominc.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/ecattominc.1' install -m 0644 'conversion/minctoecat/minctoecat.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/minctoecat.1' install -m 0644 'conversion/nifti1/nii2mnc.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/nii2mnc.1' install -m 0644 'conversion/nifti1/mnc2nii.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/mnc2nii.1' install -m 0644 'conversion/micropet/upet2mnc.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/upet2mnc.1' install -m 0644 'conversion/dcm2mnc/dcm2mnc.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/dcm2mnc.1' install -m 0644 'conversion/vff2mnc/vff2mnc.man1' '/wrkdirs/science/minc2/stage/usr/local/man/man1/vff2mnc.1' /bin/mkdir -p '/wrkdirs/science/minc2/stage/usr/local/man/man3' install -m 0644 'libsrc/ParseArgv.man3' '/wrkdirs/science/minc2/stage/usr/local/man/man3/ParseArgv.3' gmake[4]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00' gmake[3]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00' Making install in volume_io gmake[3]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00/volume_io' Making install in Documentation gmake[4]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00/volume_io/Documentation' gmake[5]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00/volume_io/Documentation' gmake[5]: Nothing to be done for 'install-exec-am'. gmake[5]: Nothing to be done for 'install-data-am'. gmake[5]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00/volume_io/Documentation' gmake[4]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00/volume_io/Documentation' Making install in Testing gmake[4]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00/volume_io/Testing' gmake[5]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00/volume_io/Testing' gmake[5]: Nothing to be done for 'install-exec-am'. gmake[5]: Nothing to be done for 'install-data-am'. gmake[5]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00/volume_io/Testing' gmake[4]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00/volume_io/Testing' gmake[4]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00/volume_io' gmake[5]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00/volume_io' gmake[5]: Nothing to be done for 'install-exec-am'. gmake[5]: Nothing to be done for 'install-data-am'. gmake[5]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00/volume_io' gmake[4]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00/volume_io' gmake[3]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00/volume_io' Making install in testdir gmake[3]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00/testdir' cd . && chmod +x run_test_arg_parse.sh run_tests.sh run_test2.sh xfmconcat_01.sh xfmconcat_02.sh run_test_progs.sh gmake[4]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00/testdir' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00/testdir' gmake[3]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00/testdir' Making install in doc gmake[3]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00/doc' gmake[4]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00/doc' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00/doc' gmake[3]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00/doc' Making install in libsrc2/test gmake[3]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00/libsrc2/test' cd . && chmod +x testminctools.sh gmake[4]: Entering directory '/wrkdirs/science/minc2/minc-release-2.2.00/libsrc2/test' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00/libsrc2/test' gmake[3]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00/libsrc2/test' gmake[2]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00' gmake[1]: Leaving directory '/wrkdirs/science/minc2/minc-release-2.2.00' ====> Compressing man pages (compress-man) =========================================================================== =================================================== ===> Building package for minc2-2.2.00_4,1 file sizes/checksums [127]: .. done packing files [127]: .. done packing directories [0]: . done =========================================================================== => Cleaning up wrkdir ===> Cleaning for minc2-2.2.00_4,1 build of science/minc2 ended at Sun Oct 9 12:31:10 PDT 2016 build time: 00:02:46