=> Building math/jags build started at Sun Oct 9 09:32:03 PDT 2016 port directory: /usr/ports/math/jags building for: DragonFly pkgbox64.dragonflybsd.org 4.7-DEVELOPMENT DragonFly v4.7.0.78.g7d868-DEVELOPMENT #7: Mon Aug 1 22:25:32 PDT 2016 root@pkgbox64.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 maintained by: ports@FreeBSD.org ident warning: no id keywords in /build/boomdata/data/.m/Release46-default/ref/../02//usr/ports/math/jags/Makefile Makefile ident: Poudriere version: 3.1-pre Host OSVERSION: 400700 Jail OSVERSION: 400600 ---Begin Environment--- STATUS=1 SAVED_TERM=screen MASTERMNT=/build/boomdata/data/.m/Release46-default/ref PATH=/usr/local/libexec/poudriere:/sbin:/bin:/usr/sbin:/usr/bin:/usr/pkg/bin:/usr/pkg/sbin:/usr/games:/usr/local/sbin:/usr/local/bin:/usr/pkg/xorg/bin:/usr/X11R6/bin:/root/bin:/sbin:/usr/sbin POUDRIERE_BUILD_TYPE=bulk PKGNAME=mcmc-jags-4.0.0 OLDPWD=/root/boom PWD=/build/boomdata/data/.m/Release46-default/ref/.p/pool MASTERNAME=Release46-default TERM=cons25 USER=root HOME=/root POUDRIERE_VERSION=3.1-pre LOCALBASE=/usr/local PACKAGE_BUILDING=yes ---End Environment--- ---Begin OPTIONS List--- ===> The following configuration options are available for mcmc-jags-4.0.0: DOCS=on: Build and/or install documentation EXAMPLES=on: Build and/or install examples ===> Use 'make config' to modify these settings ---End OPTIONS List--- --CONFIGURE_ARGS-- --with-lapack="-llapack" --with-blas="-lblas" --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran5" FC="gfortran5" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc5" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc5" MAKE=gmake CMAKE_PREFIX_PATH="/usr/local" XDG_DATA_HOME=/wrkdirs/math/jags XDG_CONFIG_HOME=/wrkdirs/math/jags HOME=/wrkdirs/math/jags TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc50 ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144 --End CONFIGURE_ENV-- --MAKE_ENV-- F77="gfortran5" FC="gfortran5" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc5" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc5" XDG_DATA_HOME=/wrkdirs/math/jags XDG_CONFIG_HOME=/wrkdirs/math/jags HOME=/wrkdirs/math/jags TMPDIR="/tmp" NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc50 ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" NOPROFILE=1 CC="gcc" CFLAGS="-pipe -isystem /usr/local/include -O2 -fno-strict-aliasing" CPP="cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib" LIBS="" CXX="g++" CXXFLAGS=" -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 444" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- MODULEVERSION=4 OSREL=4.6 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local PORTDOCS="" PORTEXAMPLES="" LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/mcmc-jags" EXAMPLESDIR="share/examples/mcmc-jags" DATADIR="share/mcmc-jags" WWWDIR="www/mcmc-jags" ETCDIR="etc/mcmc-jags" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/mcmc-jags DOCSDIR=/usr/local/share/doc/mcmc-jags EXAMPLESDIR=/usr/local/share/examples/mcmc-jags WWWDIR=/usr/local/www/mcmc-jags ETCDIR=/usr/local/etc/mcmc-jags --End SUB_LIST-- ---Begin make.conf--- NO_BACKUP=yes USE_PACKAGE_DEPENDS=yes PKG_CREATE_VERBOSE=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORT_DBDIR=/options PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles MAKE_JOBS_NUMBER=5 ---End make.conf--- =================================================== ===> NOTICE: The mcmc-jags port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License GPLv2 accepted by the user =========================================================================== =================================================== ===> mcmc-jags-4.0.0 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.8.7_3.txz Installing pkg-1.8.7_3... Extracting pkg-1.8.7_3: .......... done ===> mcmc-jags-4.0.0 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of mcmc-jags-4.0.0 =========================================================================== =================================================== =========================================================================== =================================================== ===> NOTICE: The mcmc-jags port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by mcmc-jags-4.0.0 for building =========================================================================== =================================================== ===> NOTICE: The mcmc-jags port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by mcmc-jags-4.0.0 for building => SHA256 Checksum OK for mcmc-jags/JAGS-4.0.0.tar.gz. => SHA256 Checksum OK for mcmc-jags/jags_developer_manual.pdf. => SHA256 Checksum OK for mcmc-jags/jags_installation_manual.pdf. => SHA256 Checksum OK for mcmc-jags/jags_user_manual.pdf. => SHA256 Checksum OK for mcmc-jags/classic-bugs.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> NOTICE: The mcmc-jags port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by mcmc-jags-4.0.0 for building ===> Extracting for mcmc-jags-4.0.0 => SHA256 Checksum OK for mcmc-jags/JAGS-4.0.0.tar.gz. => SHA256 Checksum OK for mcmc-jags/jags_developer_manual.pdf. => SHA256 Checksum OK for mcmc-jags/jags_installation_manual.pdf. => SHA256 Checksum OK for mcmc-jags/jags_user_manual.pdf. => SHA256 Checksum OK for mcmc-jags/classic-bugs.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for mcmc-jags-4.0.0 =========================================================================== =================================================== ===> mcmc-jags-4.0.0 depends on executable: bison - not found ===> Installing existing package /packages/All/bison-2.7.1,1.txz Installing bison-2.7.1,1... `-- Installing indexinfo-0.2.5... `-- Extracting indexinfo-0.2.5: .... done `-- Installing gettext-runtime-0.19.8.1... `-- Extracting gettext-runtime-0.19.8.1: .......... done `-- Installing m4-1.4.17_1,1... `-- Extracting m4-1.4.17_1,1: .......... done Extracting bison-2.7.1,1: .......... done ===> mcmc-jags-4.0.0 depends on executable: bison - found ===> Returning to build of mcmc-jags-4.0.0 ===> mcmc-jags-4.0.0 depends on executable: gfortran5 - not found ===> Installing existing package /packages/All/gcc5-5.4.0.txz Installing gcc5-5.4.0... `-- Installing mpc-1.0.3... | `-- Installing gmp-5.1.3_3... | `-- Extracting gmp-5.1.3_3: .......... done | `-- Installing mpfr-3.1.5... | `-- Extracting mpfr-3.1.5: .......... done `-- Extracting mpc-1.0.3: ...... done `-- Installing binutils-2.27_4,1... `-- Extracting binutils-2.27_4,1: .......... done Extracting gcc5-5.4.0: .......... done Message from gcc5-5.4.0: To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc5 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===> mcmc-jags-4.0.0 depends on executable: gfortran5 - found ===> Returning to build of mcmc-jags-4.0.0 ===> mcmc-jags-4.0.0 depends on executable: gmake - not found ===> Installing existing package /packages/All/gmake-4.2.1_1.txz Installing gmake-4.2.1_1... Extracting gmake-4.2.1_1: .......... done ===> mcmc-jags-4.0.0 depends on executable: gmake - found ===> Returning to build of mcmc-jags-4.0.0 ===> mcmc-jags-4.0.0 depends on file: /usr/local/bin/as - found =========================================================================== =================================================== ===> mcmc-jags-4.0.0 depends on shared library: libblas.so - not found ===> Installing existing package /packages/All/blas-3.5.0_3.txz Installing blas-3.5.0_3... Extracting blas-3.5.0_3: ....... done ===> mcmc-jags-4.0.0 depends on shared library: libblas.so - found (/usr/local/lib/libblas.so) ===> Returning to build of mcmc-jags-4.0.0 ===> mcmc-jags-4.0.0 depends on shared library: liblapack.so - not found ===> Installing existing package /packages/All/lapack-3.5.0.txz Installing lapack-3.5.0... Extracting lapack-3.5.0: .......... done ===> mcmc-jags-4.0.0 depends on shared library: liblapack.so - found (/usr/local/lib/liblapack.so) ===> Returning to build of mcmc-jags-4.0.0 =========================================================================== =================================================== ===> Configuring for mcmc-jags-4.0.0 configure: loading site script /usr/ports/Templates/config.site checking build system type... x86_64-portbld-dragonfly4.6 checking host system type... x86_64-portbld-dragonfly4.6 checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... (cached) /bin/mkdir -p checking for gawk... 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LD_LIBRARY_PATH checking for the default library search path... /lib /usr/lib checking for library containing dlopen... none required checking for dlerror... yes checking for shl_load... (cached) no checking for shl_load in -ldld... (cached) no checking for dld_link in -ldld... no checking for _ prefix in compiled symbols... no checking whether deplibs are loaded by dlopen... yes checking for argz.h... (cached) no checking for error_t... no checking for argz_add... no checking for argz_append... no checking for argz_count... (cached) no checking for argz_create_sep... no checking for argz_insert... no checking for argz_next... (cached) no checking for argz_stringify... (cached) no checking whether libtool supports -dlopen/-dlpreopen... yes checking for ltdl.h... no checking where to find libltdl headers... -I${top_srcdir}/libltdl checking where to find libltdl library... ${top_build_prefix}libltdl/libltdlc.la checking for unistd.h... (cached) yes checking for dl.h... (cached) no checking for sys/dl.h... no checking for dld.h... no checking for mach-o/dyld.h... no checking for dirent.h... (cached) yes checking for closedir... (cached) yes checking for opendir... (cached) yes checking for readdir... (cached) yes checking for strlcat... (cached) yes checking for strlcpy... (cached) yes checking for gcc... (cached) gcc checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking dependency style of gcc... (cached) gcc3 checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/local/bin/ld checking if the linker (/usr/local/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/local/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/local/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... dragonfly4.6 ld.so checking how to hardcode library paths into programs... immediate checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran5 accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for gfortran5 option to produce PIC... -fPIC checking if gfortran5 PIC flag -fPIC works... yes checking if gfortran5 static flag -static works... yes checking if gfortran5 supports -c -o file.o... yes checking if gfortran5 supports -c -o file.o... (cached) yes checking whether the gfortran5 linker (/usr/local/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... dragonfly4.6 ld.so checking how to hardcode library paths into programs... immediate checking for flex... flex checking lex output file root... lex.yy checking lex library... -lfl checking whether yytext is a pointer... yes checking for bison... bison -y checking ieeefp.h usability... yes checking ieeefp.h presence... yes checking for ieeefp.h... yes checking for isnan... yes checking whether isfinite is declared... yes checking whether isnan is declared... yes checking whether you have IEEE 754 floating-point arithmetic... yes checking for working isfinite... yes checking how to get verbose linking output from gfortran5... -v checking for Fortran 77 libraries of gfortran5... -L/usr/local/lib/gcc5 -L/usr/local/lib -L/usr/local/bin -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.6/5.4.0 -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.6/5.4.0/../../../../../x86_64-portbld-dragonfly4.6/lib -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.6/5.4.0/../../.. -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking how to get verbose linking output from gfortran5... (cached) -v checking for Fortran 77 libraries of gfortran5... (cached) -L/usr/local/lib/gcc5 -L/usr/local/lib -L/usr/local/bin -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.6/5.4.0 -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.6/5.4.0/../../../../../x86_64-portbld-dragonfly4.6/lib -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.6/5.4.0/../../.. -lgfortran -lm -lquadmath checking for sgemm_ in -lblas... yes checking for cheev_ in -llapack... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating m4/Makefile config.status: creating etc/Makefile config.status: creating etc/jags.pc config.status: creating libltdl/Makefile config.status: creating src/Makefile config.status: creating src/lib/Makefile config.status: creating src/lib/version.cc config.status: creating src/lib/util/Makefile config.status: creating src/lib/sarray/Makefile config.status: creating src/lib/function/Makefile config.status: creating src/lib/distribution/Makefile config.status: creating src/lib/graph/Makefile config.status: creating src/lib/sampler/Makefile config.status: creating src/lib/model/Makefile config.status: creating src/lib/module/Makefile config.status: creating src/lib/compiler/Makefile config.status: creating src/lib/rng/Makefile config.status: creating src/jrmath/Makefile config.status: creating src/include/Makefile config.status: creating src/include/util/Makefile config.status: creating src/include/sarray/Makefile config.status: creating src/include/function/Makefile config.status: creating src/include/distribution/Makefile config.status: creating src/include/graph/Makefile config.status: creating src/include/sampler/Makefile config.status: creating src/include/model/Makefile config.status: creating src/include/module/Makefile config.status: creating src/include/compiler/Makefile config.status: creating src/include/rng/Makefile config.status: creating src/modules/Makefile config.status: creating src/modules/base/Makefile config.status: creating src/modules/base/functions/Makefile config.status: creating src/modules/base/rngs/Makefile config.status: creating src/modules/base/samplers/Makefile config.status: creating src/modules/base/monitors/Makefile config.status: creating src/modules/bugs/Makefile config.status: creating src/modules/bugs/functions/Makefile config.status: creating src/modules/bugs/distributions/Makefile config.status: creating src/modules/bugs/samplers/Makefile config.status: creating src/modules/bugs/matrix/Makefile config.status: creating src/modules/msm/Makefile config.status: creating src/modules/msm/functions/Makefile config.status: creating src/modules/msm/distributions/Makefile config.status: creating src/modules/msm/matrix/Makefile config.status: creating src/modules/mix/Makefile config.status: creating src/modules/mix/distributions/Makefile config.status: creating src/modules/mix/samplers/Makefile config.status: creating src/modules/dic/Makefile config.status: creating src/modules/lecuyer/Makefile config.status: creating src/modules/glm/Makefile config.status: creating src/modules/glm/CSparse/Makefile config.status: creating src/modules/glm/SSparse/Makefile config.status: creating src/modules/glm/SSparse/UFconfig/Makefile config.status: creating src/modules/glm/SSparse/AMD/Makefile config.status: creating src/modules/glm/SSparse/COLAMD/Makefile config.status: creating src/modules/glm/SSparse/CHOLMOD/Makefile config.status: creating src/modules/glm/SSparse/CHOLMOD/Check/Makefile config.status: creating src/modules/glm/SSparse/CHOLMOD/Cholesky/Makefile config.status: creating src/modules/glm/SSparse/CHOLMOD/Core/Makefile config.status: creating src/modules/glm/SSparse/CHOLMOD/Include/Makefile config.status: creating src/modules/glm/SSparse/CHOLMOD/MatrixOps/Makefile config.status: creating src/modules/glm/SSparse/CHOLMOD/Modify/Makefile config.status: creating src/modules/glm/SSparse/CHOLMOD/Supernodal/Makefile config.status: creating src/modules/glm/samplers/Makefile config.status: creating src/terminal/Makefile config.status: creating win/Makefile config.status: creating win/runtime32/Makefile config.status: creating win/runtime64/Makefile config.status: creating doc/Makefile config.status: creating doc/manual/Makefile config.status: creating test/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands =========================================================================== =================================================== ===> Building for mcmc-jags-4.0.0 gmake[1]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0' gmake all-recursive gmake[2]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0' Making all in m4 gmake[3]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/m4' gmake[3]: Nothing to be done for 'all'. gmake[3]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/m4' Making all in libltdl gmake[3]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/libltdl' /bin/sh /wrkdirs/math/jags/JAGS-4.0.0/install-sh -d . cp ./argz_.h argz.h-t mv argz.h-t argz.h gmake all-am gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/libltdl' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -I./libltdl -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libltdlc_la-lt__alloc.lo -MD -MP -MF .deps/libltdlc_la-lt__alloc.Tpo -c -o libltdlc_la-lt__alloc.lo `test -f 'lt__alloc.c' || echo './'`lt__alloc.c /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -I./libltdl -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libltdlc_la-lt_dlloader.lo -MD -MP -MF .deps/libltdlc_la-lt_dlloader.Tpo -c -o libltdlc_la-lt_dlloader.lo `test -f 'lt_dlloader.c' || 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libjrmath_la-lgammacor.lo `test -f 'lgammacor.c' || echo './'`lgammacor.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-chebyshev.lo -MD -MP -MF .deps/libjrmath_la-chebyshev.Tpo -c chebyshev.c -fPIC -DPIC -o .libs/libjrmath_la-chebyshev.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-ftrunc.lo -MD -MP -MF .deps/libjrmath_la-ftrunc.Tpo -c ftrunc.c -fPIC -DPIC -o .libs/libjrmath_la-ftrunc.o mv -f .deps/libjrmath_la-fround.Tpo .deps/libjrmath_la-fround.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-lbeta.lo -MD -MP -MF .deps/libjrmath_la-lbeta.Tpo -c -o libjrmath_la-lbeta.lo `test -f 'lbeta.c' || echo './'`lbeta.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-lgammacor.lo -MD -MP -MF .deps/libjrmath_la-lgammacor.Tpo -c lgammacor.c -fPIC -DPIC -o .libs/libjrmath_la-lgammacor.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-lbeta.lo -MD -MP -MF .deps/libjrmath_la-lbeta.Tpo -c lbeta.c -fPIC -DPIC -o .libs/libjrmath_la-lbeta.o mv -f .deps/libjrmath_la-lgammacor.Tpo .deps/libjrmath_la-lgammacor.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe 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-DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-rbeta.lo -MD -MP -MF .deps/libjrmath_la-rbeta.Tpo -c rbeta.c -fPIC -DPIC -o .libs/libjrmath_la-rbeta.o mv -f .deps/libjrmath_la-chebyshev.Tpo .deps/libjrmath_la-chebyshev.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-pbeta.lo -MD -MP -MF .deps/libjrmath_la-pbeta.Tpo -c -o libjrmath_la-pbeta.lo `test -f 'pbeta.c' || echo './'`pbeta.c mv -f .deps/libjrmath_la-lbeta.Tpo .deps/libjrmath_la-lbeta.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-qbeta.lo -MD -MP -MF .deps/libjrmath_la-qbeta.Tpo -c -o libjrmath_la-qbeta.lo `test -f 'qbeta.c' || echo './'`qbeta.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-qbeta.lo -MD -MP -MF .deps/libjrmath_la-qbeta.Tpo -c qbeta.c -fPIC -DPIC -o .libs/libjrmath_la-qbeta.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-pbeta.lo -MD -MP -MF .deps/libjrmath_la-pbeta.Tpo -c pbeta.c -fPIC -DPIC -o .libs/libjrmath_la-pbeta.o mv -f .deps/libjrmath_la-pbeta.Tpo .deps/libjrmath_la-pbeta.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT 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-isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-dbinom.lo -MD -MP -MF .deps/libjrmath_la-dbinom.Tpo -c dbinom.c -fPIC -DPIC -o .libs/libjrmath_la-dbinom.o mv -f .deps/libjrmath_la-rbeta.Tpo .deps/libjrmath_la-rbeta.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-pbinom.lo -MD -MP -MF .deps/libjrmath_la-pbinom.Tpo -c -o libjrmath_la-pbinom.lo `test -f 'pbinom.c' || echo './'`pbinom.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-pbinom.lo -MD -MP -MF .deps/libjrmath_la-pbinom.Tpo -c pbinom.c -fPIC -DPIC -o .libs/libjrmath_la-pbinom.o mv -f .deps/libjrmath_la-rbinom.Tpo .deps/libjrmath_la-rbinom.Plo /bin/sh ../../libtool 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.deps/libjrmath_la-rchisq.Tpo -c rchisq.c -fPIC -DPIC -o .libs/libjrmath_la-rchisq.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-qbinom.lo -MD -MP -MF .deps/libjrmath_la-qbinom.Tpo -c qbinom.c -fPIC -DPIC -o .libs/libjrmath_la-qbinom.o mv -f .deps/libjrmath_la-qbeta.Tpo .deps/libjrmath_la-qbeta.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-dchisq.lo -MD -MP -MF .deps/libjrmath_la-dchisq.Tpo -c -o libjrmath_la-dchisq.lo `test -f 'dchisq.c' || echo './'`dchisq.c mv -f .deps/libjrmath_la-pbinom.Tpo .deps/libjrmath_la-pbinom.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE 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-isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-qexp.lo -MD -MP -MF .deps/libjrmath_la-qexp.Tpo -c qexp.c -fPIC -DPIC -o .libs/libjrmath_la-qexp.o mv -f .deps/libjrmath_la-dexp.Tpo .deps/libjrmath_la-dexp.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-dgamma.lo -MD -MP -MF .deps/libjrmath_la-dgamma.Tpo -c -o libjrmath_la-dgamma.lo `test -f 'dgamma.c' || echo './'`dgamma.c mv -f .deps/libjrmath_la-pexp.Tpo .deps/libjrmath_la-pexp.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-pgamma.lo -MD -MP -MF .deps/libjrmath_la-pgamma.Tpo -c -o libjrmath_la-pgamma.lo `test -f 'pgamma.c' || echo './'`pgamma.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-dgamma.lo -MD -MP -MF .deps/libjrmath_la-dgamma.Tpo -c dgamma.c -fPIC -DPIC -o .libs/libjrmath_la-dgamma.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-pgamma.lo -MD -MP -MF .deps/libjrmath_la-pgamma.Tpo -c pgamma.c -fPIC -DPIC -o .libs/libjrmath_la-pgamma.o mv -f .deps/libjrmath_la-qexp.Tpo .deps/libjrmath_la-qexp.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-qgamma.lo -MD -MP 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-I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-rhyper.lo -MD -MP -MF .deps/libjrmath_la-rhyper.Tpo -c rhyper.c -fPIC -DPIC -o .libs/libjrmath_la-rhyper.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-qgamma.lo -MD -MP -MF .deps/libjrmath_la-qgamma.Tpo -c qgamma.c -fPIC -DPIC -o .libs/libjrmath_la-qgamma.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-dhyper.lo -MD -MP -MF .deps/libjrmath_la-dhyper.Tpo -c dhyper.c -fPIC -DPIC -o .libs/libjrmath_la-dhyper.o mv -f .deps/libjrmath_la-dhyper.Tpo .deps/libjrmath_la-dhyper.Plo mv -f .deps/libjrmath_la-rhyper.Tpo 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phyper.c -fPIC -DPIC -o .libs/libjrmath_la-phyper.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-qhyper.lo -MD -MP -MF .deps/libjrmath_la-qhyper.Tpo -c qhyper.c -fPIC -DPIC -o .libs/libjrmath_la-qhyper.o mv -f .deps/libjrmath_la-pgamma.Tpo .deps/libjrmath_la-pgamma.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-rlnorm.lo -MD -MP -MF .deps/libjrmath_la-rlnorm.Tpo -c -o libjrmath_la-rlnorm.lo `test -f 'rlnorm.c' || echo './'`rlnorm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-rlnorm.lo -MD -MP -MF .deps/libjrmath_la-rlnorm.Tpo -c rlnorm.c -fPIC -DPIC -o .libs/libjrmath_la-rlnorm.o mv -f .deps/libjrmath_la-phyper.Tpo .deps/libjrmath_la-phyper.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-dlnorm.lo -MD -MP -MF .deps/libjrmath_la-dlnorm.Tpo -c -o libjrmath_la-dlnorm.lo `test -f 'dlnorm.c' || echo './'`dlnorm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-dlnorm.lo -MD -MP -MF .deps/libjrmath_la-dlnorm.Tpo -c dlnorm.c -fPIC -DPIC -o .libs/libjrmath_la-dlnorm.o mv -f .deps/libjrmath_la-qgamma.Tpo .deps/libjrmath_la-qgamma.Plo mv -f .deps/libjrmath_la-qhyper.Tpo .deps/libjrmath_la-qhyper.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-plnorm.lo -MD -MP -MF .deps/libjrmath_la-plnorm.Tpo -c -o libjrmath_la-plnorm.lo `test -f 'plnorm.c' || echo './'`plnorm.c /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-qlnorm.lo -MD -MP -MF .deps/libjrmath_la-qlnorm.Tpo -c -o libjrmath_la-qlnorm.lo `test -f 'qlnorm.c' || echo './'`qlnorm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-plnorm.lo -MD -MP -MF .deps/libjrmath_la-plnorm.Tpo -c plnorm.c -fPIC -DPIC -o .libs/libjrmath_la-plnorm.o mv -f 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-isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-qweibull.lo -MD -MP -MF .deps/libjrmath_la-qweibull.Tpo -c qweibull.c -fPIC -DPIC -o .libs/libjrmath_la-qweibull.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-rnchisq.lo -MD -MP -MF .deps/libjrmath_la-rnchisq.Tpo -c rnchisq.c -fPIC -DPIC -o .libs/libjrmath_la-rnchisq.o mv -f .deps/libjrmath_la-dweibull.Tpo .deps/libjrmath_la-dweibull.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-dnchisq.lo -MD -MP -MF .deps/libjrmath_la-dnchisq.Tpo -c -o libjrmath_la-dnchisq.lo `test -f 'dnchisq.c' || echo './'`dnchisq.c mv -f .deps/libjrmath_la-pweibull.Tpo .deps/libjrmath_la-pweibull.Plo 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-I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-rcauchy.lo -MD -MP -MF .deps/libjrmath_la-rcauchy.Tpo -c rcauchy.c -fPIC -DPIC -o .libs/libjrmath_la-rcauchy.o mv -f .deps/libjrmath_la-pnchisq.Tpo .deps/libjrmath_la-pnchisq.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-pcauchy.lo -MD -MP -MF .deps/libjrmath_la-pcauchy.Tpo -c -o libjrmath_la-pcauchy.lo `test -f 'pcauchy.c' || echo './'`pcauchy.c mv -f .deps/libjrmath_la-qnchisq.Tpo .deps/libjrmath_la-qnchisq.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT 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gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-rf.lo -MD -MP -MF .deps/libjrmath_la-rf.Tpo -c rf.c -fPIC -DPIC -o .libs/libjrmath_la-rf.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-pf.lo -MD -MP -MF .deps/libjrmath_la-pf.Tpo -c pf.c -fPIC -DPIC -o .libs/libjrmath_la-pf.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-df.lo -MD -MP -MF .deps/libjrmath_la-df.Tpo -c df.c -fPIC -DPIC -o .libs/libjrmath_la-df.o mv -f .deps/libjrmath_la-rf.Tpo .deps/libjrmath_la-rf.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. 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.deps/libjrmath_la-bessel_y.Tpo -c bessel_y.c -fPIC -DPIC -o .libs/libjrmath_la-bessel_y.o mv -f .deps/libjrmath_la-qf.Tpo .deps/libjrmath_la-qf.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-dgeom.lo -MD -MP -MF .deps/libjrmath_la-dgeom.Tpo -c -o libjrmath_la-dgeom.lo `test -f 'dgeom.c' || echo './'`dgeom.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-dgeom.lo -MD -MP -MF .deps/libjrmath_la-dgeom.Tpo -c dgeom.c -fPIC -DPIC -o .libs/libjrmath_la-dgeom.o mv -f .deps/libjrmath_la-bessel_i.Tpo .deps/libjrmath_la-bessel_i.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-pgeom.lo -MD -MP -MF .deps/libjrmath_la-pgeom.Tpo -c -o libjrmath_la-pgeom.lo `test -f 'pgeom.c' || echo './'`pgeom.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-pgeom.lo -MD -MP -MF .deps/libjrmath_la-pgeom.Tpo -c pgeom.c -fPIC -DPIC -o .libs/libjrmath_la-pgeom.o mv -f .deps/libjrmath_la-dgeom.Tpo .deps/libjrmath_la-dgeom.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-qgeom.lo -MD -MP -MF .deps/libjrmath_la-qgeom.Tpo -c -o libjrmath_la-qgeom.lo `test -f 'qgeom.c' || echo './'`qgeom.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-qgeom.lo -MD -MP -MF .deps/libjrmath_la-qgeom.Tpo -c qgeom.c -fPIC -DPIC -o .libs/libjrmath_la-qgeom.o mv -f .deps/libjrmath_la-pgeom.Tpo .deps/libjrmath_la-pgeom.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-rgeom.lo -MD -MP -MF .deps/libjrmath_la-rgeom.Tpo -c -o libjrmath_la-rgeom.lo `test -f 'rgeom.c' || echo './'`rgeom.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-rgeom.lo -MD -MP -MF .deps/libjrmath_la-rgeom.Tpo -c rgeom.c -fPIC -DPIC -o .libs/libjrmath_la-rgeom.o mv -f .deps/libjrmath_la-qgeom.Tpo .deps/libjrmath_la-qgeom.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-dnbeta.lo -MD -MP -MF .deps/libjrmath_la-dnbeta.Tpo -c -o libjrmath_la-dnbeta.lo `test -f 'dnbeta.c' || echo './'`dnbeta.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-dnbeta.lo -MD -MP -MF .deps/libjrmath_la-dnbeta.Tpo -c dnbeta.c -fPIC -DPIC -o .libs/libjrmath_la-dnbeta.o mv -f .deps/libjrmath_la-rgeom.Tpo .deps/libjrmath_la-rgeom.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-pnbeta.lo -MD -MP -MF .deps/libjrmath_la-pnbeta.Tpo -c -o libjrmath_la-pnbeta.lo `test -f 'pnbeta.c' || echo './'`pnbeta.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-pnbeta.lo -MD -MP -MF .deps/libjrmath_la-pnbeta.Tpo -c pnbeta.c -fPIC -DPIC -o .libs/libjrmath_la-pnbeta.o mv -f .deps/libjrmath_la-dnbeta.Tpo .deps/libjrmath_la-dnbeta.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-qnbeta.lo -MD -MP -MF .deps/libjrmath_la-qnbeta.Tpo -c -o libjrmath_la-qnbeta.lo `test -f 'qnbeta.c' || echo './'`qnbeta.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-qnbeta.lo -MD -MP -MF .deps/libjrmath_la-qnbeta.Tpo -c qnbeta.c -fPIC -DPIC -o .libs/libjrmath_la-qnbeta.o mv -f .deps/libjrmath_la-pnbeta.Tpo .deps/libjrmath_la-pnbeta.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-dnf.lo -MD -MP -MF .deps/libjrmath_la-dnf.Tpo -c -o libjrmath_la-dnf.lo `test -f 'dnf.c' || echo './'`dnf.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-dnf.lo -MD -MP -MF .deps/libjrmath_la-dnf.Tpo -c dnf.c -fPIC -DPIC -o .libs/libjrmath_la-dnf.o mv -f .deps/libjrmath_la-qnbeta.Tpo .deps/libjrmath_la-qnbeta.Plo /bin/sh 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-f 'qnf.c' || echo './'`qnf.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-qnf.lo -MD -MP -MF .deps/libjrmath_la-qnf.Tpo -c qnf.c -fPIC -DPIC -o .libs/libjrmath_la-qnf.o mv -f .deps/libjrmath_la-pnf.Tpo .deps/libjrmath_la-pnf.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-dnt.lo -MD -MP -MF .deps/libjrmath_la-dnt.Tpo -c -o libjrmath_la-dnt.lo `test -f 'dnt.c' || echo './'`dnt.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-dnt.lo -MD -MP -MF .deps/libjrmath_la-dnt.Tpo -c dnt.c -fPIC -DPIC -o .libs/libjrmath_la-dnt.o mv -f .deps/libjrmath_la-qnf.Tpo .deps/libjrmath_la-qnf.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-pnt.lo -MD -MP -MF .deps/libjrmath_la-pnt.Tpo -c -o libjrmath_la-pnt.lo `test -f 'pnt.c' || echo './'`pnt.c mv -f .deps/libjrmath_la-dnt.Tpo .deps/libjrmath_la-dnt.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-qnt.lo -MD -MP -MF .deps/libjrmath_la-qnt.Tpo -c -o libjrmath_la-qnt.lo `test -f 'qnt.c' || echo './'`qnt.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-pnt.lo -MD -MP -MF .deps/libjrmath_la-pnt.Tpo -c pnt.c -fPIC -DPIC -o .libs/libjrmath_la-pnt.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-qnt.lo -MD -MP -MF .deps/libjrmath_la-qnt.Tpo -c qnt.c -fPIC -DPIC -o .libs/libjrmath_la-qnt.o mv -f .deps/libjrmath_la-bessel_k.Tpo .deps/libjrmath_la-bessel_k.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-sign.lo -MD -MP -MF .deps/libjrmath_la-sign.Tpo -c -o libjrmath_la-sign.lo `test -f 'sign.c' || echo './'`sign.c mv -f .deps/libjrmath_la-pnt.Tpo .deps/libjrmath_la-pnt.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -DMATHLIB_STANDALONE -isystem /usr/local/include -std=c99 -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT libjrmath_la-sign.lo -MD -MP -MF .deps/libjrmath_la-sign.Tpo -c sign.c -fPIC -DPIC -o .libs/libjrmath_la-sign.o mv -f .deps/libjrmath_la-bessel_y.Tpo .deps/libjrmath_la-bessel_y.Plo mv -f .deps/libjrmath_la-qnt.Tpo .deps/libjrmath_la-qnt.Plo mv -f .deps/libjrmath_la-sign.Tpo .deps/libjrmath_la-sign.Plo mv -f .deps/libjrmath_la-bessel_j.Tpo .deps/libjrmath_la-bessel_j.Plo /bin/sh ../../libtool --tag=CXX --mode=link g++ -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -no-undefined -version-info 0:0:0 -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -o libjrmath.la -rpath /usr/local/lib libjrmath_la-callbacks.lo libjrmath_la-beta.lo libjrmath_la-gamma.lo libjrmath_la-gammalims.lo libjrmath_la-lgamma.lo libjrmath_la-polygamma.lo libjrmath_la-toms708.lo libjrmath_la-mlutils.lo libjrmath_la-stirlerr.lo libjrmath_la-bd0.lo libjrmath_la-choose.lo libjrmath_la-d1mach.lo libjrmath_la-i1mach.lo libjrmath_la-fsign.lo libjrmath_la-imax2.lo libjrmath_la-imin2.lo libjrmath_la-fmin2.lo libjrmath_la-fmax2.lo libjrmath_la-fprec.lo libjrmath_la-fround.lo libjrmath_la-ftrunc.lo libjrmath_la-chebyshev.lo libjrmath_la-lgammacor.lo libjrmath_la-lbeta.lo libjrmath_la-rbeta.lo libjrmath_la-dbeta.lo libjrmath_la-pbeta.lo libjrmath_la-qbeta.lo libjrmath_la-rbinom.lo libjrmath_la-dbinom.lo libjrmath_la-pbinom.lo libjrmath_la-qbinom.lo libjrmath_la-rchisq.lo libjrmath_la-dchisq.lo libjrmath_la-pchisq.lo libjrmath_la-qchisq.lo libjrmath_la-rexp.lo libjrmath_la-dexp.lo libjrmath_la-pexp.lo libjrmath_la-qexp.lo libjrmath_la-rgamma.lo libjrmath_la-dgamma.lo libjrmath_la-pgamma.lo libjrmath_la-qgamma.lo libjrmath_la-rhyper.lo libjrmath_la-dhyper.lo libjrmath_la-phyper.lo libjrmath_la-qhyper.lo libjrmath_la-rlnorm.lo libjrmath_la-dlnorm.lo libjrmath_la-plnorm.lo libjrmath_la-qlnorm.lo libjrmath_la-rlogis.lo libjrmath_la-dlogis.lo libjrmath_la-plogis.lo libjrmath_la-qlogis.lo libjrmath_la-rnbinom.lo libjrmath_la-dnbinom.lo libjrmath_la-pnbinom.lo libjrmath_la-qnbinom.lo libjrmath_la-rnorm.lo libjrmath_la-dnorm.lo libjrmath_la-pnorm.lo libjrmath_la-qnorm.lo libjrmath_la-rpois.lo libjrmath_la-dpois.lo libjrmath_la-ppois.lo libjrmath_la-qpois.lo libjrmath_la-rt.lo libjrmath_la-dt.lo libjrmath_la-pt.lo libjrmath_la-qt.lo libjrmath_la-runif.lo libjrmath_la-dunif.lo libjrmath_la-punif.lo libjrmath_la-qunif.lo libjrmath_la-rweibull.lo libjrmath_la-dweibull.lo libjrmath_la-pweibull.lo libjrmath_la-qweibull.lo libjrmath_la-rnchisq.lo libjrmath_la-dnchisq.lo libjrmath_la-pnchisq.lo libjrmath_la-qnchisq.lo libjrmath_la-rcauchy.lo libjrmath_la-dcauchy.lo libjrmath_la-pcauchy.lo libjrmath_la-qcauchy.lo libjrmath_la-rf.lo libjrmath_la-df.lo libjrmath_la-pf.lo libjrmath_la-qf.lo libjrmath_la-cospi.lo libjrmath_la-gamma_cody.lo libjrmath_la-bessel_i.lo libjrmath_la-bessel_j.lo libjrmath_la-bessel_k.lo libjrmath_la-bessel_y.lo libjrmath_la-dgeom.lo libjrmath_la-pgeom.lo libjrmath_la-qgeom.lo libjrmath_la-rgeom.lo libjrmath_la-dnbeta.lo libjrmath_la-pnbeta.lo libjrmath_la-qnbeta.lo libjrmath_la-dnf.lo libjrmath_la-pnf.lo libjrmath_la-qnf.lo libjrmath_la-dnt.lo libjrmath_la-pnt.lo libjrmath_la-qnt.lo libjrmath_la-sign.lo -lm libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/crti.o /usr/lib/gcc50/crtbeginS.o .libs/libjrmath_la-callbacks.o .libs/libjrmath_la-beta.o .libs/libjrmath_la-gamma.o .libs/libjrmath_la-gammalims.o .libs/libjrmath_la-lgamma.o .libs/libjrmath_la-polygamma.o .libs/libjrmath_la-toms708.o .libs/libjrmath_la-mlutils.o .libs/libjrmath_la-stirlerr.o .libs/libjrmath_la-bd0.o .libs/libjrmath_la-choose.o .libs/libjrmath_la-d1mach.o .libs/libjrmath_la-i1mach.o .libs/libjrmath_la-fsign.o .libs/libjrmath_la-imax2.o .libs/libjrmath_la-imin2.o .libs/libjrmath_la-fmin2.o .libs/libjrmath_la-fmax2.o .libs/libjrmath_la-fprec.o .libs/libjrmath_la-fround.o .libs/libjrmath_la-ftrunc.o .libs/libjrmath_la-chebyshev.o .libs/libjrmath_la-lgammacor.o .libs/libjrmath_la-lbeta.o .libs/libjrmath_la-rbeta.o .libs/libjrmath_la-dbeta.o .libs/libjrmath_la-pbeta.o .libs/libjrmath_la-qbeta.o .libs/libjrmath_la-rbinom.o .libs/libjrmath_la-dbinom.o .libs/libjrmath_la-pbinom.o .libs/libjrmath_la-qbinom.o .libs/libjrmath_la-rchisq.o .libs/libjrmath_la-dchisq.o .libs/libjrmath_la-pchisq.o .libs/libjrmath_la-qchisq.o .libs/libjrmath_la-rexp.o .libs/libjrmath_la-dexp.o .libs/libjrmath_la-pexp.o .libs/libjrmath_la-qexp.o .libs/libjrmath_la-rgamma.o .libs/libjrmath_la-dgamma.o .libs/libjrmath_la-pgamma.o .libs/libjrmath_la-qgamma.o .libs/libjrmath_la-rhyper.o .libs/libjrmath_la-dhyper.o .libs/libjrmath_la-phyper.o .libs/libjrmath_la-qhyper.o .libs/libjrmath_la-rlnorm.o .libs/libjrmath_la-dlnorm.o .libs/libjrmath_la-plnorm.o .libs/libjrmath_la-qlnorm.o .libs/libjrmath_la-rlogis.o .libs/libjrmath_la-dlogis.o .libs/libjrmath_la-plogis.o .libs/libjrmath_la-qlogis.o 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depbase=`echo cs_permute.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_permute.lo -MD -MP -MF $depbase.Tpo -c -o cs_permute.lo cs_permute.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo cs_pinv.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_pinv.lo -MD -MP -MF $depbase.Tpo -c -o cs_pinv.lo cs_pinv.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo cs_post.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_post.lo -MD -MP -MF $depbase.Tpo -c -o cs_post.lo cs_post.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo cs_pvec.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_pvec.lo -MD -MP -MF $depbase.Tpo -c -o cs_pvec.lo cs_pvec.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_multiply.lo -MD -MP -MF .deps/cs_multiply.Tpo -c cs_multiply.c -fPIC -DPIC -o .libs/cs_multiply.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_permute.lo -MD -MP -MF .deps/cs_permute.Tpo -c cs_permute.c -fPIC -DPIC -o .libs/cs_permute.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_pinv.lo -MD -MP -MF .deps/cs_pinv.Tpo -c cs_pinv.c -fPIC -DPIC -o .libs/cs_pinv.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_post.lo -MD -MP -MF .deps/cs_post.Tpo -c cs_post.c -fPIC -DPIC -o .libs/cs_post.o depbase=`echo cs_qr.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_qr.lo -MD -MP -MF $depbase.Tpo -c -o cs_qr.lo cs_qr.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_pvec.lo -MD -MP -MF .deps/cs_pvec.Tpo -c cs_pvec.c -fPIC -DPIC -o .libs/cs_pvec.o depbase=`echo cs_qrsol.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_qrsol.lo -MD -MP -MF $depbase.Tpo -c -o cs_qrsol.lo cs_qrsol.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo cs_scatter.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_scatter.lo -MD -MP -MF $depbase.Tpo -c -o cs_scatter.lo cs_scatter.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_qr.lo -MD -MP -MF .deps/cs_qr.Tpo -c cs_qr.c -fPIC -DPIC -o .libs/cs_qr.o depbase=`echo cs_schol.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_schol.lo -MD -MP -MF $depbase.Tpo -c -o cs_schol.lo cs_schol.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_qrsol.lo -MD -MP -MF .deps/cs_qrsol.Tpo -c cs_qrsol.c -fPIC -DPIC -o .libs/cs_qrsol.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_scatter.lo -MD -MP -MF .deps/cs_scatter.Tpo -c cs_scatter.c -fPIC -DPIC -o .libs/cs_scatter.o depbase=`echo cs_sqr.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_sqr.lo -MD -MP -MF $depbase.Tpo -c -o cs_sqr.lo cs_sqr.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_schol.lo -MD -MP -MF .deps/cs_schol.Tpo -c cs_schol.c -fPIC -DPIC -o .libs/cs_schol.o depbase=`echo cs_symperm.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_symperm.lo -MD -MP -MF $depbase.Tpo -c -o cs_symperm.lo cs_symperm.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_sqr.lo -MD -MP -MF .deps/cs_sqr.Tpo -c cs_sqr.c -fPIC -DPIC -o .libs/cs_sqr.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_symperm.lo -MD -MP -MF .deps/cs_symperm.Tpo -c cs_symperm.c -fPIC -DPIC -o .libs/cs_symperm.o depbase=`echo cs_tdfs.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_tdfs.lo -MD -MP -MF $depbase.Tpo -c -o cs_tdfs.lo cs_tdfs.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo cs_malloc.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_malloc.lo -MD -MP -MF $depbase.Tpo -c -o cs_malloc.lo cs_malloc.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_malloc.lo -MD -MP -MF .deps/cs_malloc.Tpo -c cs_malloc.c -fPIC -DPIC -o .libs/cs_malloc.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_tdfs.lo -MD -MP -MF .deps/cs_tdfs.Tpo -c cs_tdfs.c -fPIC -DPIC -o .libs/cs_tdfs.o depbase=`echo cs_transpose.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_transpose.lo -MD -MP -MF $depbase.Tpo -c -o cs_transpose.lo cs_transpose.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo cs_compress.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_compress.lo -MD -MP -MF $depbase.Tpo -c -o cs_compress.lo cs_compress.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo cs_usolve.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_usolve.lo -MD -MP -MF $depbase.Tpo -c -o cs_usolve.lo cs_usolve.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_transpose.lo -MD -MP -MF .deps/cs_transpose.Tpo -c cs_transpose.c -fPIC -DPIC -o .libs/cs_transpose.o depbase=`echo cs_utsolve.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_utsolve.lo -MD -MP -MF $depbase.Tpo -c -o cs_utsolve.lo cs_utsolve.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_usolve.lo -MD -MP -MF .deps/cs_usolve.Tpo -c cs_usolve.c -fPIC -DPIC -o .libs/cs_usolve.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_compress.lo -MD -MP -MF .deps/cs_compress.Tpo -c cs_compress.c -fPIC -DPIC -o .libs/cs_compress.o depbase=`echo cs_scc.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_scc.lo -MD -MP -MF $depbase.Tpo -c -o cs_scc.lo cs_scc.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_utsolve.lo -MD -MP -MF .deps/cs_utsolve.Tpo -c cs_utsolve.c -fPIC -DPIC -o .libs/cs_utsolve.o depbase=`echo cs_maxtrans.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_maxtrans.lo -MD -MP -MF $depbase.Tpo -c -o cs_maxtrans.lo cs_maxtrans.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo cs_dmperm.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_dmperm.lo -MD -MP -MF $depbase.Tpo -c -o cs_dmperm.lo cs_dmperm.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo cs_updown.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_updown.lo -MD -MP -MF $depbase.Tpo -c -o cs_updown.lo cs_updown.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_scc.lo -MD -MP -MF .deps/cs_scc.Tpo -c cs_scc.c -fPIC -DPIC -o .libs/cs_scc.o depbase=`echo cs_print.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_print.lo -MD -MP -MF $depbase.Tpo -c -o cs_print.lo cs_print.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_dmperm.lo -MD -MP -MF .deps/cs_dmperm.Tpo -c cs_dmperm.c -fPIC -DPIC -o .libs/cs_dmperm.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_updown.lo -MD -MP -MF .deps/cs_updown.Tpo -c cs_updown.c -fPIC -DPIC -o .libs/cs_updown.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_maxtrans.lo -MD -MP -MF .deps/cs_maxtrans.Tpo -c cs_maxtrans.c -fPIC -DPIC -o .libs/cs_maxtrans.o depbase=`echo cs_norm.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_norm.lo -MD -MP -MF $depbase.Tpo -c -o cs_norm.lo cs_norm.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_print.lo -MD -MP -MF .deps/cs_print.Tpo -c cs_print.c -fPIC -DPIC -o .libs/cs_print.o depbase=`echo cs_load.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_load.lo -MD -MP -MF $depbase.Tpo -c -o cs_load.lo cs_load.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_load.lo -MD -MP -MF .deps/cs_load.Tpo -c cs_load.c -fPIC -DPIC -o .libs/cs_load.o depbase=`echo cs_dfs.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_dfs.lo -MD -MP -MF $depbase.Tpo -c -o cs_dfs.lo cs_dfs.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo cs_reach.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_reach.lo -MD -MP -MF $depbase.Tpo -c -o cs_reach.lo cs_reach.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_dfs.lo -MD -MP -MF .deps/cs_dfs.Tpo -c cs_dfs.c -fPIC -DPIC -o .libs/cs_dfs.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_norm.lo -MD -MP -MF .deps/cs_norm.Tpo -c cs_norm.c -fPIC -DPIC -o .libs/cs_norm.o depbase=`echo cs_spsolve.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_spsolve.lo -MD -MP -MF $depbase.Tpo -c -o cs_spsolve.lo cs_spsolve.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_spsolve.lo -MD -MP -MF .deps/cs_spsolve.Tpo -c cs_spsolve.c -fPIC -DPIC -o .libs/cs_spsolve.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_reach.lo -MD -MP -MF .deps/cs_reach.Tpo -c cs_reach.c -fPIC -DPIC -o .libs/cs_reach.o depbase=`echo cs_ereach.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_ereach.lo -MD -MP -MF $depbase.Tpo -c -o cs_ereach.lo cs_ereach.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_ereach.lo -MD -MP -MF .deps/cs_ereach.Tpo -c cs_ereach.c -fPIC -DPIC -o .libs/cs_ereach.o depbase=`echo cs_leaf.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_leaf.lo -MD -MP -MF $depbase.Tpo -c -o cs_leaf.lo cs_leaf.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo cs_randperm.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cs_randperm.lo -MD -MP -MF $depbase.Tpo -c -o cs_randperm.lo cs_randperm.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -isystem /usr/local/include -pipe -isystem 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cs_sqr.lo cs_symperm.lo cs_tdfs.lo cs_malloc.lo cs_transpose.lo cs_compress.lo cs_usolve.lo cs_utsolve.lo cs_scc.lo cs_maxtrans.lo cs_dmperm.lo cs_updown.lo cs_print.lo cs_norm.lo cs_load.lo cs_dfs.lo cs_reach.lo cs_spsolve.lo cs_ereach.lo cs_leaf.lo cs_randperm.lo libtool: link: /usr/local/bin/ar cru .libs/csparse.a .libs/cs_add.o .libs/cs_amd.o .libs/cs_chol.o .libs/cs_cholsol.o .libs/cs_counts.o .libs/cs_cumsum.o .libs/cs_droptol.o .libs/cs_dropzeros.o .libs/cs_dupl.o .libs/cs_entry.o .libs/cs_etree.o .libs/cs_fkeep.o .libs/cs_gaxpy.o .libs/cs_happly.o .libs/cs_house.o .libs/cs_ipvec.o .libs/cs_lsolve.o .libs/cs_ltsolve.o .libs/cs_lu.o .libs/cs_lusol.o .libs/cs_util.o .libs/cs_multiply.o .libs/cs_permute.o .libs/cs_pinv.o .libs/cs_post.o .libs/cs_pvec.o .libs/cs_qr.o .libs/cs_qrsol.o .libs/cs_scatter.o .libs/cs_schol.o .libs/cs_sqr.o .libs/cs_symperm.o .libs/cs_tdfs.o .libs/cs_malloc.o .libs/cs_transpose.o .libs/cs_compress.o .libs/cs_usolve.o .libs/cs_utsolve.o .libs/cs_scc.o .libs/cs_maxtrans.o .libs/cs_dmperm.o .libs/cs_updown.o .libs/cs_print.o .libs/cs_norm.o .libs/cs_load.o .libs/cs_dfs.o .libs/cs_reach.o .libs/cs_spsolve.o .libs/cs_ereach.o .libs/cs_leaf.o .libs/cs_randperm.o /usr/local/bin/ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: /usr/local/bin/ranlib .libs/csparse.a libtool: link: ( cd ".libs" && rm -f "csparse.la" && ln -s "../csparse.la" "csparse.la" ) gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/CSparse' Making all in SSparse gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse' Making all in UFconfig gmake[7]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/UFconfig' gmake[7]: Nothing to be done for 'all'. gmake[7]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/UFconfig' Making all in AMD gmake[7]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/AMD' /bin/sh 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'./'`Source/amd_dump.c /bin/sh ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT Source/amd_la-amd_info.lo -MD -MP -MF Source/.deps/amd_la-amd_info.Tpo -c -o Source/amd_la-amd_info.lo `test -f 'Source/amd_info.c' || echo './'`Source/amd_info.c /bin/sh ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT Source/amd_la-amd_post_tree.lo -MD -MP -MF Source/.deps/amd_la-amd_post_tree.Tpo -c -o Source/amd_la-amd_post_tree.lo `test -f 'Source/amd_post_tree.c' || echo './'`Source/amd_post_tree.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT Source/amd_la-amd_1.lo -MD -MP -MF Source/.deps/amd_la-amd_1.Tpo -c Source/amd_1.c -fPIC -DPIC -o Source/.libs/amd_la-amd_1.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT Source/amd_la-amd_info.lo -MD -MP -MF Source/.deps/amd_la-amd_info.Tpo -c Source/amd_info.c -fPIC -DPIC -o Source/.libs/amd_la-amd_info.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT Source/amd_la-amd_post_tree.lo -MD -MP -MF Source/.deps/amd_la-amd_post_tree.Tpo -c Source/amd_post_tree.c -fPIC -DPIC -o Source/.libs/amd_la-amd_post_tree.o libtool: compile: gfortran5 -O -Wl,-rpath=/usr/local/lib/gcc5 -c Source/amdbar.f -fPIC -o Source/.libs/amdbar.o mv -f Source/.deps/amd_la-amd_post_tree.Tpo Source/.deps/amd_la-amd_post_tree.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT Source/amd_la-amd_dump.lo -MD -MP -MF Source/.deps/amd_la-amd_dump.Tpo -c Source/amd_dump.c -fPIC -DPIC -o Source/.libs/amd_la-amd_dump.o /bin/sh ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT Source/amd_la-amd_2.lo -MD -MP -MF Source/.deps/amd_la-amd_2.Tpo -c -o Source/amd_la-amd_2.lo `test -f 'Source/amd_2.c' || echo './'`Source/amd_2.c mv -f Source/.deps/amd_la-amd_info.Tpo Source/.deps/amd_la-amd_info.Plo /bin/sh ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT Source/amd_la-amd_control.lo -MD -MP -MF Source/.deps/amd_la-amd_control.Tpo -c -o Source/amd_la-amd_control.lo `test -f 'Source/amd_control.c' || echo './'`Source/amd_control.c mv -f Source/.deps/amd_la-amd_dump.Tpo Source/.deps/amd_la-amd_dump.Plo /bin/sh ../../../../../libtool --tag=F77 --mode=compile gfortran5 -O -Wl,-rpath=/usr/local/lib/gcc5 -c -o Source/amd.lo Source/amd.f libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT Source/amd_la-amd_control.lo -MD -MP -MF Source/.deps/amd_la-amd_control.Tpo -c Source/amd_control.c -fPIC -DPIC -o Source/.libs/amd_la-amd_control.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT Source/amd_la-amd_2.lo -MD -MP -MF Source/.deps/amd_la-amd_2.Tpo -c Source/amd_2.c -fPIC -DPIC -o Source/.libs/amd_la-amd_2.o libtool: compile: gfortran5 -O -Wl,-rpath=/usr/local/lib/gcc5 -c Source/amd.f -fPIC -o Source/.libs/amd.o mv -f Source/.deps/amd_la-amd_control.Tpo Source/.deps/amd_la-amd_control.Plo /bin/sh ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT Source/amd_la-amd_order.lo -MD -MP -MF Source/.deps/amd_la-amd_order.Tpo -c -o Source/amd_la-amd_order.lo `test -f 'Source/amd_order.c' || echo './'`Source/amd_order.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT Source/amd_la-amd_order.lo -MD -MP -MF Source/.deps/amd_la-amd_order.Tpo -c Source/amd_order.c -fPIC -DPIC -o Source/.libs/amd_la-amd_order.o mv -f Source/.deps/amd_la-amd_1.Tpo Source/.deps/amd_la-amd_1.Plo /bin/sh ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT Source/amd_la-amd_preprocess.lo -MD -MP -MF Source/.deps/amd_la-amd_preprocess.Tpo -c -o Source/amd_la-amd_preprocess.lo `test -f 'Source/amd_preprocess.c' || echo './'`Source/amd_preprocess.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT Source/amd_la-amd_preprocess.lo -MD -MP -MF Source/.deps/amd_la-amd_preprocess.Tpo -c Source/amd_preprocess.c -fPIC -DPIC -o Source/.libs/amd_la-amd_preprocess.o mv -f Source/.deps/amd_la-amd_order.Tpo Source/.deps/amd_la-amd_order.Plo /bin/sh ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT Source/amd_la-amd_aat.lo -MD -MP -MF Source/.deps/amd_la-amd_aat.Tpo -c -o Source/amd_la-amd_aat.lo `test -f 'Source/amd_aat.c' || echo './'`Source/amd_aat.c /bin/sh ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT Source/amd_la-amd_defaults.lo -MD -MP -MF Source/.deps/amd_la-amd_defaults.Tpo -c -o Source/amd_la-amd_defaults.lo `test -f 'Source/amd_defaults.c' || echo './'`Source/amd_defaults.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT Source/amd_la-amd_aat.lo -MD -MP -MF Source/.deps/amd_la-amd_aat.Tpo -c Source/amd_aat.c -fPIC -DPIC -o Source/.libs/amd_la-amd_aat.o mv -f Source/.deps/amd_la-amd_preprocess.Tpo Source/.deps/amd_la-amd_preprocess.Plo /bin/sh ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT Source/amd_la-amd_global.lo -MD -MP -MF Source/.deps/amd_la-amd_global.Tpo -c -o Source/amd_la-amd_global.lo `test -f 'Source/amd_global.c' || echo './'`Source/amd_global.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT Source/amd_la-amd_defaults.lo -MD -MP -MF Source/.deps/amd_la-amd_defaults.Tpo -c Source/amd_defaults.c -fPIC -DPIC -o Source/.libs/amd_la-amd_defaults.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT Source/amd_la-amd_global.lo -MD -MP -MF Source/.deps/amd_la-amd_global.Tpo -c Source/amd_global.c -fPIC -DPIC -o Source/.libs/amd_la-amd_global.o mv -f Source/.deps/amd_la-amd_global.Tpo Source/.deps/amd_la-amd_global.Plo mv -f Source/.deps/amd_la-amd_defaults.Tpo Source/.deps/amd_la-amd_defaults.Plo /bin/sh ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT Source/amd_la-amd_postorder.lo -MD -MP -MF Source/.deps/amd_la-amd_postorder.Tpo -c -o Source/amd_la-amd_postorder.lo `test -f 'Source/amd_postorder.c' || echo './'`Source/amd_postorder.c /bin/sh ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT Source/amd_la-amd_valid.lo -MD -MP -MF Source/.deps/amd_la-amd_valid.Tpo -c -o Source/amd_la-amd_valid.lo `test -f 'Source/amd_valid.c' || echo './'`Source/amd_valid.c mv -f Source/.deps/amd_la-amd_aat.Tpo Source/.deps/amd_la-amd_aat.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT Source/amd_la-amd_postorder.lo -MD -MP -MF Source/.deps/amd_la-amd_postorder.Tpo -c Source/amd_postorder.c -fPIC -DPIC -o Source/.libs/amd_la-amd_postorder.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT Source/amd_la-amd_valid.lo -MD -MP -MF Source/.deps/amd_la-amd_valid.Tpo -c Source/amd_valid.c -fPIC -DPIC -o Source/.libs/amd_la-amd_valid.o mv -f Source/.deps/amd_la-amd_valid.Tpo Source/.deps/amd_la-amd_valid.Plo mv -f Source/.deps/amd_la-amd_postorder.Tpo Source/.deps/amd_la-amd_postorder.Plo mv -f Source/.deps/amd_la-amd_2.Tpo Source/.deps/amd_la-amd_2.Plo /bin/sh ../../../../../libtool --tag=F77 --mode=link gfortran5 -O -Wl,-rpath=/usr/local/lib/gcc5 -no-undefined -module -avoid-version -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -o amd.la Source/amd_la-amd_1.lo Source/amdbar.lo Source/amd_la-amd_dump.lo Source/amd_la-amd_info.lo Source/amd_la-amd_post_tree.lo Source/amd_la-amd_2.lo Source/amd_la-amd_control.lo Source/amd.lo Source/amd_la-amd_order.lo Source/amd_la-amd_preprocess.lo Source/amd_la-amd_aat.lo Source/amd_la-amd_defaults.lo Source/amd_la-amd_global.lo Source/amd_la-amd_postorder.lo Source/amd_la-amd_valid.lo libtool: link: /usr/local/bin/ar cru .libs/amd.a Source/.libs/amd_la-amd_1.o Source/.libs/amdbar.o Source/.libs/amd_la-amd_dump.o Source/.libs/amd_la-amd_info.o Source/.libs/amd_la-amd_post_tree.o Source/.libs/amd_la-amd_2.o Source/.libs/amd_la-amd_control.o Source/.libs/amd.o Source/.libs/amd_la-amd_order.o Source/.libs/amd_la-amd_preprocess.o Source/.libs/amd_la-amd_aat.o Source/.libs/amd_la-amd_defaults.o Source/.libs/amd_la-amd_global.o Source/.libs/amd_la-amd_postorder.o Source/.libs/amd_la-amd_valid.o /usr/local/bin/ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: /usr/local/bin/ranlib .libs/amd.a libtool: link: ( cd ".libs" && rm -f "amd.la" && ln -s "../amd.la" "amd.la" ) gmake[7]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/AMD' Making all in COLAMD gmake[7]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/COLAMD' /bin/sh ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/COLAMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT Source/colamd_la-colamd.lo -MD -MP -MF Source/.deps/colamd_la-colamd.Tpo -c -o Source/colamd_la-colamd.lo `test -f 'Source/colamd.c' || echo './'`Source/colamd.c /bin/sh ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/COLAMD/Include -isystem /usr/local/include -pipe -isystem 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.deps/cholmodcheck_la-cholmod_write.Tpo -c cholmod_write.c -fPIC -DPIC -o .libs/cholmodcheck_la-cholmod_write.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cholmodcheck_la-cholmod_read.lo -MD -MP -MF .deps/cholmodcheck_la-cholmod_read.Tpo -c cholmod_read.c -fPIC -DPIC -o .libs/cholmodcheck_la-cholmod_read.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cholmodcheck_la-cholmod_check.lo -MD -MP -MF .deps/cholmodcheck_la-cholmod_check.Tpo -c cholmod_check.c -fPIC -DPIC -o .libs/cholmodcheck_la-cholmod_check.o mv -f .deps/cholmodcheck_la-cholmod_write.Tpo .deps/cholmodcheck_la-cholmod_write.Plo mv -f .deps/cholmodcheck_la-cholmod_read.Tpo .deps/cholmodcheck_la-cholmod_read.Plo mv -f .deps/cholmodcheck_la-cholmod_check.Tpo .deps/cholmodcheck_la-cholmod_check.Plo /bin/sh ../../../../../../libtool --tag=CC --mode=link gcc -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -no-undefined -module -avoid-version -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -o cholmodcheck.la cholmodcheck_la-cholmod_check.lo cholmodcheck_la-cholmod_read.lo cholmodcheck_la-cholmod_write.lo libtool: link: /usr/local/bin/ar cru .libs/cholmodcheck.a .libs/cholmodcheck_la-cholmod_check.o .libs/cholmodcheck_la-cholmod_read.o .libs/cholmodcheck_la-cholmod_write.o /usr/local/bin/ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: /usr/local/bin/ranlib .libs/cholmodcheck.a libtool: link: ( cd ".libs" && rm -f "cholmodcheck.la" && ln -s "../cholmodcheck.la" "cholmodcheck.la" ) gmake[8]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Check' Making all in Cholesky gmake[8]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Cholesky' /bin/sh ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cholmodcholesky_la-cholmod_amd.lo -MD -MP -MF .deps/cholmodcholesky_la-cholmod_amd.Tpo -c -o cholmodcholesky_la-cholmod_amd.lo `test -f 'cholmod_amd.c' || echo './'`cholmod_amd.c /bin/sh ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cholmodcholesky_la-cholmod_analyze.lo -MD -MP -MF .deps/cholmodcholesky_la-cholmod_analyze.Tpo -c -o cholmodcholesky_la-cholmod_analyze.lo `test -f 'cholmod_analyze.c' || echo './'`cholmod_analyze.c /bin/sh ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cholmodcholesky_la-cholmod_colamd.lo -MD -MP -MF .deps/cholmodcholesky_la-cholmod_colamd.Tpo -c -o cholmodcholesky_la-cholmod_colamd.lo `test -f 'cholmod_colamd.c' || echo './'`cholmod_colamd.c /bin/sh ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cholmodcholesky_la-cholmod_etree.lo -MD -MP -MF .deps/cholmodcholesky_la-cholmod_etree.Tpo -c -o cholmodcholesky_la-cholmod_etree.lo `test -f 'cholmod_etree.c' || echo './'`cholmod_etree.c /bin/sh ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include 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-I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cholmodcholesky_la-cholmod_etree.lo -MD -MP -MF .deps/cholmodcholesky_la-cholmod_etree.Tpo -c cholmod_etree.c -fPIC -DPIC -o .libs/cholmodcholesky_la-cholmod_etree.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cholmodcholesky_la-cholmod_colamd.lo -MD -MP -MF .deps/cholmodcholesky_la-cholmod_colamd.Tpo -c cholmod_colamd.c -fPIC -DPIC -o .libs/cholmodcholesky_la-cholmod_colamd.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cholmodcholesky_la-cholmod_analyze.lo -MD -MP -MF .deps/cholmodcholesky_la-cholmod_analyze.Tpo -c cholmod_analyze.c -fPIC -DPIC -o .libs/cholmodcholesky_la-cholmod_analyze.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cholmodcholesky_la-cholmod_factorize.lo -MD -MP -MF .deps/cholmodcholesky_la-cholmod_factorize.Tpo -c cholmod_factorize.c -fPIC -DPIC -o .libs/cholmodcholesky_la-cholmod_factorize.o mv -f .deps/cholmodcholesky_la-cholmod_amd.Tpo .deps/cholmodcholesky_la-cholmod_amd.Plo /bin/sh ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cholmodcholesky_la-cholmod_postorder.lo -MD -MP -MF .deps/cholmodcholesky_la-cholmod_postorder.Tpo -c -o cholmodcholesky_la-cholmod_postorder.lo `test -f 'cholmod_postorder.c' || echo './'`cholmod_postorder.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cholmodcholesky_la-cholmod_postorder.lo -MD -MP -MF .deps/cholmodcholesky_la-cholmod_postorder.Tpo -c cholmod_postorder.c -fPIC -DPIC -o .libs/cholmodcholesky_la-cholmod_postorder.o mv -f .deps/cholmodcholesky_la-cholmod_etree.Tpo .deps/cholmodcholesky_la-cholmod_etree.Plo /bin/sh ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 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-I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cholmodcholesky_la-cholmod_resymbol.lo -MD -MP -MF .deps/cholmodcholesky_la-cholmod_resymbol.Tpo -c cholmod_resymbol.c -fPIC -DPIC -o .libs/cholmodcholesky_la-cholmod_resymbol.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cholmodcholesky_la-cholmod_rcond.lo -MD -MP -MF .deps/cholmodcholesky_la-cholmod_rcond.Tpo -c cholmod_rcond.c -fPIC -DPIC 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cholmodcore_la-cholmod_add.lo cholmodcore_la-cholmod_dense.lo cholmodcore_la-cholmod_triplet.lo cholmodcore_la-cholmod_band.lo cholmodcore_la-cholmod_error.lo cholmodcore_la-cholmod_change_factor.lo cholmodcore_la-cholmod_factor.lo cholmodcore_la-cholmod_common.lo cholmodcore_la-cholmod_memory.lo cholmodcore_la-cholmod_complex.lo cholmodcore_la-cholmod_sparse.lo libtool: link: /usr/local/bin/ar cru .libs/cholmodcore.a .libs/cholmodcore_la-cholmod_aat.o .libs/cholmodcore_la-cholmod_copy.o .libs/cholmodcore_la-cholmod_transpose.o .libs/cholmodcore_la-cholmod_add.o .libs/cholmodcore_la-cholmod_dense.o .libs/cholmodcore_la-cholmod_triplet.o .libs/cholmodcore_la-cholmod_band.o .libs/cholmodcore_la-cholmod_error.o .libs/cholmodcore_la-cholmod_change_factor.o .libs/cholmodcore_la-cholmod_factor.o .libs/cholmodcore_la-cholmod_common.o .libs/cholmodcore_la-cholmod_memory.o .libs/cholmodcore_la-cholmod_complex.o .libs/cholmodcore_la-cholmod_sparse.o /usr/local/bin/ar: `u' modifier ignored since 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cholmodmatrix_la-cholmod_submatrix.lo -MD -MP -MF .deps/cholmodmatrix_la-cholmod_submatrix.Tpo -c -o cholmodmatrix_la-cholmod_submatrix.lo `test -f 'cholmod_submatrix.c' || echo './'`cholmod_submatrix.c /bin/sh ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cholmodmatrix_la-cholmod_horzcat.lo -MD -MP -MF .deps/cholmodmatrix_la-cholmod_horzcat.Tpo -c -o cholmodmatrix_la-cholmod_horzcat.lo `test -f 'cholmod_horzcat.c' || echo './'`cholmod_horzcat.c /bin/sh ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 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-c cholmod_submatrix.c -fPIC -DPIC -o .libs/cholmodmatrix_la-cholmod_submatrix.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cholmodmatrix_la-cholmod_sdmult.lo -MD -MP -MF .deps/cholmodmatrix_la-cholmod_sdmult.Tpo -c cholmod_sdmult.c -fPIC -DPIC -o .libs/cholmodmatrix_la-cholmod_sdmult.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cholmodmatrix_la-cholmod_drop.lo -MD -MP -MF .deps/cholmodmatrix_la-cholmod_drop.Tpo -c cholmod_drop.c -fPIC -DPIC -o .libs/cholmodmatrix_la-cholmod_drop.o mv -f .deps/cholmodmatrix_la-cholmod_drop.Tpo 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cholmodmatrix_la-cholmod_ssmult.lo -MD -MP -MF .deps/cholmodmatrix_la-cholmod_ssmult.Tpo -c cholmod_ssmult.c -fPIC -DPIC -o .libs/cholmodmatrix_la-cholmod_ssmult.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cholmodmatrix_la-cholmod_symmetry.lo -MD -MP -MF .deps/cholmodmatrix_la-cholmod_symmetry.Tpo -c cholmod_symmetry.c -fPIC -DPIC -o .libs/cholmodmatrix_la-cholmod_symmetry.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cholmodmatrix_la-cholmod_norm.lo -MD -MP -MF .deps/cholmodmatrix_la-cholmod_norm.Tpo -c cholmod_norm.c -fPIC -DPIC -o .libs/cholmodmatrix_la-cholmod_norm.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cholmodmatrix_la-cholmod_horzcat.lo -MD -MP -MF .deps/cholmodmatrix_la-cholmod_horzcat.Tpo -c cholmod_horzcat.c -fPIC -DPIC -o .libs/cholmodmatrix_la-cholmod_horzcat.o mv -f .deps/cholmodmatrix_la-cholmod_symmetry.Tpo .deps/cholmodmatrix_la-cholmod_symmetry.Plo /bin/sh ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cholmodmatrix_la-cholmod_vertcat.lo -MD -MP -MF .deps/cholmodmatrix_la-cholmod_vertcat.Tpo -c -o cholmodmatrix_la-cholmod_vertcat.lo `test -f 'cholmod_vertcat.c' || echo './'`cholmod_vertcat.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cholmodmatrix_la-cholmod_vertcat.lo -MD -MP -MF .deps/cholmodmatrix_la-cholmod_vertcat.Tpo -c cholmod_vertcat.c -fPIC -DPIC -o .libs/cholmodmatrix_la-cholmod_vertcat.o mv -f .deps/cholmodmatrix_la-cholmod_ssmult.Tpo .deps/cholmodmatrix_la-cholmod_ssmult.Plo mv -f .deps/cholmodmatrix_la-cholmod_norm.Tpo .deps/cholmodmatrix_la-cholmod_norm.Plo mv -f .deps/cholmodmatrix_la-cholmod_horzcat.Tpo .deps/cholmodmatrix_la-cholmod_horzcat.Plo mv -f .deps/cholmodmatrix_la-cholmod_vertcat.Tpo .deps/cholmodmatrix_la-cholmod_vertcat.Plo mv -f .deps/cholmodmatrix_la-cholmod_sdmult.Tpo .deps/cholmodmatrix_la-cholmod_sdmult.Plo /bin/sh 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/usr/local/bin/ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: /usr/local/bin/ranlib .libs/cholmodmatrix.a libtool: link: ( cd ".libs" && rm -f "cholmodmatrix.la" && ln -s "../cholmodmatrix.la" "cholmodmatrix.la" ) gmake[8]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/MatrixOps' Making all in Modify gmake[8]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Modify' /bin/sh ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cholmodmodify_la-cholmod_rowadd.lo -MD -MP -MF .deps/cholmodmodify_la-cholmod_rowadd.Tpo -c -o cholmodmodify_la-cholmod_rowadd.lo `test -f 'cholmod_rowadd.c' || echo './'`cholmod_rowadd.c /bin/sh ../../../../../../libtool 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-I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cholmodmodify_la-cholmod_rowadd.lo -MD -MP -MF .deps/cholmodmodify_la-cholmod_rowadd.Tpo -c cholmod_rowadd.c -fPIC -DPIC -o .libs/cholmodmodify_la-cholmod_rowadd.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -MT cholmodmodify_la-cholmod_updown.lo -MD -MP -MF .deps/cholmodmodify_la-cholmod_updown.Tpo -c cholmod_updown.c -fPIC -DPIC -o .libs/cholmodmodify_la-cholmod_updown.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include 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/usr/lib/gcc50/crtendS.o /usr/lib/crtn.o -O2 -Wl,-rpath=/usr/local/lib/gcc5 -B/usr/local/bin -Wl,-soname -Wl,dic.so -o .libs/dic.so libtool: link: ( cd ".libs" && rm -f "dic.la" && ln -s "../dic.la" "dic.la" ) gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/dic' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules' gmake[5]: Nothing to be done for 'all-am'. gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules' Making all in terminal gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/terminal' gmake all-am gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/terminal' g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -I../../libltdl -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT jags_terminal-parser.o -MD -MP -MF .deps/jags_terminal-parser.Tpo -c -o jags_terminal-parser.o `test -f 'parser.cc' || echo './'`parser.cc g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -I../../libltdl -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT jags_terminal-scanner.o -MD -MP -MF .deps/jags_terminal-scanner.Tpo -c -o jags_terminal-scanner.o `test -f 'scanner.cc' || echo './'`scanner.cc g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -I../../libltdl -isystem /usr/local/include -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -MT jags_terminal-ReadData.o -MD -MP -MF .deps/jags_terminal-ReadData.Tpo -c -o jags_terminal-ReadData.o `test -f 'ReadData.cc' || echo './'`ReadData.cc rm -f mcmc-jags jags.tmp jterm=`echo jags-terminal | sed -e 's,x,x,'`; \ sed -e 's,@jagsmoddir\@,/usr/local/lib/JAGS/modules-4,g' -e 's,@libexecdir\@,/usr/local/libexec,g' -e 's,@libdir\@,/usr/local/lib,g' -e "s,@jterm\@,${jterm},g" ./jags.in > jags.tmp chmod +x jags.tmp mv jags.tmp mcmc-jags mv -f .deps/jags_terminal-ReadData.Tpo .deps/jags_terminal-ReadData.Po mv -f .deps/jags_terminal-scanner.Tpo .deps/jags_terminal-scanner.Po mv -f .deps/jags_terminal-parser.Tpo .deps/jags_terminal-parser.Po /bin/sh ../../libtool --tag=CXX --mode=link g++ -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -o jags-terminal jags_terminal-parser.o jags_terminal-scanner.o jags_terminal-ReadData.o ../../libltdl/libltdlc.la ../../src/lib/libjags.la -dlopen ../../src/modules/base/basemod.la -dlopen ../../src/modules/bugs/bugs.la -dlopen ../../src/modules/dic/dic.la -dlopen ../../src/modules/glm/glm.la -dlopen ../../src/modules/lecuyer/lecuyer.la -dlopen ../../src/modules/mix/mix.la -dlopen ../../src/modules/msm/msm.la libtool: link: rm -f .libs/jags-terminal.nm .libs/jags-terminal.nmS .libs/jags-terminal.nmT libtool: link: (cd .libs && gcc -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -c -fno-builtin "jags-terminalS.c") libtool: link: rm -f ".libs/jags-terminalS.c" ".libs/jags-terminal.nm" ".libs/jags-terminal.nmS" ".libs/jags-terminal.nmT" libtool: link: g++ -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -Wl,-rpath=/usr/local/lib/gcc5 -B/usr/local/bin -o .libs/jags-terminal jags_terminal-parser.o jags_terminal-scanner.o jags_terminal-ReadData.o .libs/jags-terminalS.o /wrkdirs/math/jags/JAGS-4.0.0/libltdl/./.libs/dlopen.a -L/usr/local/lib/gcc5 -L/usr/local/lib ../../libltdl/.libs/libltdlc.a ../../src/lib/.libs/libjags.so -Wl,-rpath -Wl,/usr/local/lib gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/terminal' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/terminal' gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src' gmake[4]: Nothing to be done for 'all-am'. gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src' gmake[3]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src' Making all in etc gmake[3]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/etc' gmake[3]: Nothing to be done for 'all'. gmake[3]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/etc' Making all in win gmake[3]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/win' Making all in runtime32 gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/win/runtime32' gmake[4]: Nothing to be done for 'all'. gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/win/runtime32' Making all in runtime64 gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/win/runtime64' gmake[4]: Nothing to be done for 'all'. gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/win/runtime64' gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/win' gmake[4]: Nothing to be done for 'all-am'. gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/win' gmake[3]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/win' Making all in doc gmake[3]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/doc' Making all in manual gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/doc/manual' gmake[4]: Nothing to be done for 'all'. gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/doc/manual' gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/doc' gmake[4]: Nothing to be done for 'all-am'. gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/doc' gmake[3]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/doc' Making all in test gmake[3]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/test' gmake[3]: Nothing to be done for 'all'. gmake[3]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/test' gmake[3]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0' gmake[3]: Nothing to be done for 'all-am'. gmake[3]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0' gmake[2]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0' gmake[1]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0' =========================================================================== =================================================== ===> mcmc-jags-4.0.0 depends on executable: gfortran5 - found =========================================================================== =================================================== ===> Staging for mcmc-jags-4.0.0 ===> Generating temporary packing list gmake[1]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0' Making install in m4 gmake[2]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/m4' gmake[3]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/m4' gmake[3]: Nothing to be done for 'install-exec-am'. gmake[3]: Nothing to be done for 'install-data-am'. gmake[3]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/m4' gmake[2]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/m4' Making install in libltdl gmake[2]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/libltdl' gmake install-am gmake[3]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/libltdl' gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/libltdl' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/libltdl' gmake[3]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/libltdl' gmake[2]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/libltdl' Making install in src gmake[2]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src' Making install in include gmake[3]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include' Making install in compiler gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/compiler' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/compiler' gmake[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/wrkdirs/math/jags/stage/usr/local/include/JAGS/compiler' install -m 0644 Compiler.h LogicalFactory.h ParseTree.h Counter.h CounterTab.h MixtureFactory.h NodeFactory.h ObsFuncTab.h '/wrkdirs/math/jags/stage/usr/local/include/JAGS/compiler' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/compiler' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/compiler' Making install in distribution gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/distribution' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/distribution' gmake[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/wrkdirs/math/jags/stage/usr/local/include/JAGS/distribution' install -m 0644 Distribution.h ScalarDist.h VectorDist.h ArrayDist.h DistPtr.h DistTab.h DistError.h RScalarDist.h '/wrkdirs/math/jags/stage/usr/local/include/JAGS/distribution' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/distribution' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/distribution' Making install in function gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/function' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/function' gmake[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/wrkdirs/math/jags/stage/usr/local/include/JAGS/function' install -m 0644 FuncTab.h Function.h ScalarFunction.h VectorFunction.h ArrayFunction.h LinkFunction.h FunctionPtr.h FuncError.h DPQFunction.h DFunction.h PFunction.h QFunction.h ScalarLogDensity.h VectorLogDensity.h ArrayLogDensity.h ScalarVectorFunction.h '/wrkdirs/math/jags/stage/usr/local/include/JAGS/function' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/function' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/function' Making install in graph gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/graph' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/graph' gmake[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/wrkdirs/math/jags/stage/usr/local/include/JAGS/graph' install -m 0644 AggNode.h MixtureNode.h MixTab.h Node.h ConstantNode.h LogicalNode.h StochasticNode.h Graph.h DeterministicNode.h GraphMarks.h NodeError.h ScalarLogicalNode.h VectorLogicalNode.h ArrayLogicalNode.h LinkNode.h VSLogicalNode.h ScalarStochasticNode.h VectorStochasticNode.h ArrayStochasticNode.h ParentError.h '/wrkdirs/math/jags/stage/usr/local/include/JAGS/graph' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/graph' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/graph' Making install in model gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/model' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/model' gmake[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/wrkdirs/math/jags/stage/usr/local/include/JAGS/model' install -m 0644 SymTab.h NodeArray.h Model.h Monitor.h BUGSModel.h MonitorFactory.h MonitorControl.h MonitorInfo.h NodeArraySubset.h '/wrkdirs/math/jags/stage/usr/local/include/JAGS/model' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/model' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/model' Making install in sampler gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/sampler' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/sampler' gmake[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/wrkdirs/math/jags/stage/usr/local/include/JAGS/sampler' install -m 0644 Sampler.h SamplerFactory.h SingletonFactory.h Slicer.h Metropolis.h RWMetropolis.h Linear.h GraphView.h StepAdapter.h TemperedMetropolis.h SampleMethodNoAdapt.h SingletonGraphView.h MutableSampleMethod.h ImmutableSampleMethod.h MutableSampler.h ImmutableSampler.h '/wrkdirs/math/jags/stage/usr/local/include/JAGS/sampler' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/sampler' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/sampler' Making install in sarray gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/sarray' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/sarray' gmake[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/wrkdirs/math/jags/stage/usr/local/include/JAGS/sarray' install -m 0644 RangeIterator.h SArray.h Range.h SimpleRange.h '/wrkdirs/math/jags/stage/usr/local/include/JAGS/sarray' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/sarray' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/sarray' Making install in rng gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/rng' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/rng' gmake[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/wrkdirs/math/jags/stage/usr/local/include/JAGS/rng' install -m 0644 RNG.h RmathRNG.h RNGFactory.h TruncatedNormal.h '/wrkdirs/math/jags/stage/usr/local/include/JAGS/rng' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/rng' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/rng' Making install in util gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/util' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/util' gmake[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/wrkdirs/math/jags/stage/usr/local/include/JAGS/util' install -m 0644 nainf.h dim.h logical.h integer.h '/wrkdirs/math/jags/stage/usr/local/include/JAGS/util' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/util' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/util' Making install in module gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/module' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/module' gmake[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/wrkdirs/math/jags/stage/usr/local/include/JAGS/module' install -m 0644 Module.h ModuleError.h '/wrkdirs/math/jags/stage/usr/local/include/JAGS/module' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/module' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include/module' gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include' gmake[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/wrkdirs/math/jags/stage/usr/local/include/JAGS' install -m 0644 Console.h JRmath.h version.h '/wrkdirs/math/jags/stage/usr/local/include/JAGS' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include' gmake[3]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/include' Making install in lib gmake[3]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib' Making install in util gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/util' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/util' gmake[5]: Nothing to be done for 'install-exec-am'. gmake[5]: Nothing to be done for 'install-data-am'. gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/util' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/util' Making install in sarray gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/sarray' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/sarray' gmake[5]: Nothing to be done for 'install-exec-am'. gmake[5]: Nothing to be done for 'install-data-am'. gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/sarray' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/sarray' Making install in distribution gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/distribution' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/distribution' gmake[5]: Nothing to be done for 'install-exec-am'. gmake[5]: Nothing to be done for 'install-data-am'. gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/distribution' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/distribution' Making install in function gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/function' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/function' gmake[5]: Nothing to be done for 'install-exec-am'. gmake[5]: Nothing to be done for 'install-data-am'. gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/function' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/function' Making install in sampler gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/sampler' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/sampler' gmake[5]: Nothing to be done for 'install-exec-am'. gmake[5]: Nothing to be done for 'install-data-am'. gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/sampler' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/sampler' Making install in graph gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/graph' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/graph' gmake[5]: Nothing to be done for 'install-exec-am'. gmake[5]: Nothing to be done for 'install-data-am'. gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/graph' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/graph' Making install in model gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/model' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/model' gmake[5]: Nothing to be done for 'install-exec-am'. gmake[5]: Nothing to be done for 'install-data-am'. gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/model' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/model' Making install in compiler gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/compiler' gmake install-am gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/compiler' gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/compiler' gmake[6]: Nothing to be done for 'install-exec-am'. gmake[6]: Nothing to be done for 'install-data-am'. gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/compiler' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/compiler' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/compiler' Making install in rng gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/rng' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/rng' gmake[5]: Nothing to be done for 'install-exec-am'. gmake[5]: Nothing to be done for 'install-data-am'. gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/rng' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/rng' Making install in module gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/module' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/module' gmake[5]: Nothing to be done for 'install-exec-am'. gmake[5]: Nothing to be done for 'install-data-am'. gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/module' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib/module' gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib' /bin/mkdir -p '/wrkdirs/math/jags/stage/usr/local/lib' /bin/sh ../../libtool --mode=install /usr/bin/install -c libjags.la '/wrkdirs/math/jags/stage/usr/local/lib' libtool: install: /usr/bin/install -c .libs/libjags.so.4.0.0 /wrkdirs/math/jags/stage/usr/local/lib/libjags.so.4.0.0 libtool: install: (cd /wrkdirs/math/jags/stage/usr/local/lib && { ln -s -f libjags.so.4.0.0 libjags.so.4 || { rm -f libjags.so.4 && ln -s libjags.so.4.0.0 libjags.so.4; }; }) libtool: install: (cd /wrkdirs/math/jags/stage/usr/local/lib && { ln -s -f libjags.so.4.0.0 libjags.so || { rm -f libjags.so && ln -s libjags.so.4.0.0 libjags.so; }; }) libtool: install: /usr/bin/install -c .libs/libjags.lai /wrkdirs/math/jags/stage/usr/local/lib/libjags.la libtool: install: warning: remember to run `libtool --finish /usr/local/lib' gmake[5]: Nothing to be done for 'install-data-am'. gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib' gmake[3]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/lib' Making install in jrmath gmake[3]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/jrmath' gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/jrmath' /bin/mkdir -p '/wrkdirs/math/jags/stage/usr/local/lib' /bin/sh ../../libtool --mode=install /usr/bin/install -c libjrmath.la '/wrkdirs/math/jags/stage/usr/local/lib' libtool: install: /usr/bin/install -c .libs/libjrmath.so.0.0.0 /wrkdirs/math/jags/stage/usr/local/lib/libjrmath.so.0.0.0 libtool: install: (cd /wrkdirs/math/jags/stage/usr/local/lib && { ln -s -f libjrmath.so.0.0.0 libjrmath.so.0 || { rm -f libjrmath.so.0 && ln -s libjrmath.so.0.0.0 libjrmath.so.0; }; }) libtool: install: (cd /wrkdirs/math/jags/stage/usr/local/lib && { ln -s -f libjrmath.so.0.0.0 libjrmath.so || { rm -f libjrmath.so && ln -s libjrmath.so.0.0.0 libjrmath.so; }; }) libtool: install: /usr/bin/install -c .libs/libjrmath.lai /wrkdirs/math/jags/stage/usr/local/lib/libjrmath.la libtool: install: warning: remember to run `libtool --finish /usr/local/lib' gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/jrmath' gmake[3]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/jrmath' Making install in modules gmake[3]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules' Making install in base gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/base' Making install in functions gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/base/functions' gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/base/functions' gmake[6]: Nothing to be done for 'install-exec-am'. gmake[6]: Nothing to be done for 'install-data-am'. gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/base/functions' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/base/functions' Making install in samplers gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/base/samplers' gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/base/samplers' gmake[6]: Nothing to be done for 'install-exec-am'. gmake[6]: Nothing to be done for 'install-data-am'. gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/base/samplers' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/base/samplers' Making install in monitors gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/base/monitors' gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/base/monitors' gmake[6]: Nothing to be done for 'install-exec-am'. gmake[6]: Nothing to be done for 'install-data-am'. gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/base/monitors' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/base/monitors' Making install in rngs gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/base/rngs' gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/base/rngs' gmake[6]: Nothing to be done for 'install-exec-am'. gmake[6]: Nothing to be done for 'install-data-am'. gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/base/rngs' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/base/rngs' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/base' gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/base' gmake[6]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4' /bin/sh ../../../libtool --mode=install /usr/bin/install -c basemod.la '/wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4' libtool: install: warning: relinking `basemod.la' libtool: install: (cd /wrkdirs/math/jags/JAGS-4.0.0/src/modules/base; /bin/sh /wrkdirs/math/jags/JAGS-4.0.0/libtool --tag CXX --mode=relink g++ -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -module -avoid-version -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -o basemod.la -rpath /usr/local/lib/JAGS/modules-4 basemod_la-base.lo functions/libbasefunctions.la monitors/libbasemonitors.la samplers/libbasesamplers.la rngs/libbaserngs.la ../../../src/jrmath/libjrmath.la ../../../src/lib/libjags.la -inst-prefix-dir /wrkdirs/math/jags/stage) libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/crti.o /usr/lib/gcc50/crtbeginS.o .libs/basemod_la-base.o -Wl,--whole-archive functions/.libs/libbasefunctions.a monitors/.libs/libbasemonitors.a samplers/.libs/libbasesamplers.a rngs/.libs/libbaserngs.a -Wl,--no-whole-archive -Wl,-rpath -Wl,/usr/local/lib -L/usr/local/lib/gcc5 -L/usr/local/lib ../../../src/jrmath/.libs/libjrmath.so ../../../src/lib/.libs/libjags.so -L/usr/lib/gcc50 -lstdc++ -lm -lc -lgcc -lgcc_pic /usr/lib/gcc50/crtendS.o /usr/lib/crtn.o -O2 -Wl,-rpath=/usr/local/lib/gcc5 -B/usr/local/bin -Wl,-soname -Wl,basemod.so -o .libs/basemod.so libtool: install: /usr/bin/install -c .libs/basemod.soT /wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4/basemod.so libtool: install: /usr/bin/install -c .libs/basemod.lai /wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4/basemod.la libtool: install: warning: remember to run `libtool --finish /usr/local/lib/JAGS/modules-4' gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/base' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/base' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/base' Making install in bugs gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/bugs' Making install in distributions gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/bugs/distributions' gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/bugs/distributions' gmake[6]: Nothing to be done for 'install-exec-am'. gmake[6]: Nothing to be done for 'install-data-am'. gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/bugs/distributions' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/bugs/distributions' Making install in functions gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/bugs/functions' gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/bugs/functions' gmake[6]: Nothing to be done for 'install-exec-am'. gmake[6]: Nothing to be done for 'install-data-am'. gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/bugs/functions' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/bugs/functions' Making install in samplers gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/bugs/samplers' gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/bugs/samplers' gmake[6]: Nothing to be done for 'install-exec-am'. gmake[6]: Nothing to be done for 'install-data-am'. gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/bugs/samplers' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/bugs/samplers' Making install in matrix gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/bugs/matrix' gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/bugs/matrix' gmake[6]: Nothing to be done for 'install-exec-am'. gmake[6]: Nothing to be done for 'install-data-am'. gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/bugs/matrix' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/bugs/matrix' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/bugs' gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/bugs' gmake[6]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4' /bin/sh ../../../libtool --mode=install /usr/bin/install -c bugs.la '/wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4' libtool: install: warning: relinking `bugs.la' libtool: install: (cd /wrkdirs/math/jags/JAGS-4.0.0/src/modules/bugs; /bin/sh /wrkdirs/math/jags/JAGS-4.0.0/libtool --tag CXX --mode=relink g++ -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -module -avoid-version -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -o bugs.la -rpath /usr/local/lib/JAGS/modules-4 bugs_la-bugs.lo distributions/libbugsdist.la functions/libbugsfunc.la samplers/libbugssampler.la matrix/libbugsmatrix.la ../../../src/jrmath/libjrmath.la ../../../src/lib/libjags.la -llapack -lblas -L/usr/local/lib/gcc5 -L/usr/local/lib -L/usr/local/bin -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.6/5.4.0 -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.6/5.4.0/../../../../../x86_64-portbld-dragonfly4.6/lib -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.6/5.4.0/../../.. -lgfortran -lm -lquadmath -inst-prefix-dir /wrkdirs/math/jags/stage) libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/crti.o /usr/lib/gcc50/crtbeginS.o .libs/bugs_la-bugs.o -Wl,--whole-archive distributions/.libs/libbugsdist.a functions/.libs/libbugsfunc.a samplers/.libs/libbugssampler.a matrix/.libs/libbugsmatrix.a -Wl,--no-whole-archive -Wl,-rpath -Wl,/usr/local/lib -L/usr/local/lib/gcc5 -L/usr/local/lib ../../../src/jrmath/.libs/libjrmath.so ../../../src/lib/.libs/libjags.so -llapack -lblas -L/usr/local/bin -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.6/5.4.0 -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.6/5.4.0/../../../../../x86_64-portbld-dragonfly4.6/lib -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.6/5.4.0/../../.. -lgfortran -lquadmath -L/usr/lib/gcc50 -lstdc++ -lm -lc -lgcc -lgcc_pic /usr/lib/gcc50/crtendS.o /usr/lib/crtn.o -O2 -Wl,-rpath=/usr/local/lib/gcc5 -B/usr/local/bin -Wl,-soname -Wl,bugs.so -o .libs/bugs.so libtool: install: /usr/bin/install -c .libs/bugs.soT /wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4/bugs.so libtool: install: /usr/bin/install -c .libs/bugs.lai /wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4/bugs.la libtool: install: warning: remember to run `libtool --finish /usr/local/lib/JAGS/modules-4' gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/bugs' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/bugs' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/bugs' Making install in msm gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/msm' Making install in distributions gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/msm/distributions' gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/msm/distributions' gmake[6]: Nothing to be done for 'install-exec-am'. gmake[6]: Nothing to be done for 'install-data-am'. gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/msm/distributions' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/msm/distributions' Making install in functions gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/msm/functions' gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/msm/functions' gmake[6]: Nothing to be done for 'install-exec-am'. gmake[6]: Nothing to be done for 'install-data-am'. gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/msm/functions' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/msm/functions' Making install in matrix gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/msm/matrix' gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/msm/matrix' gmake[6]: Nothing to be done for 'install-exec-am'. gmake[6]: Nothing to be done for 'install-data-am'. gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/msm/matrix' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/msm/matrix' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/msm' gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/msm' gmake[6]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4' /bin/sh ../../../libtool --mode=install /usr/bin/install -c msm.la '/wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4' libtool: install: warning: relinking `msm.la' libtool: install: (cd /wrkdirs/math/jags/JAGS-4.0.0/src/modules/msm; /bin/sh /wrkdirs/math/jags/JAGS-4.0.0/libtool --tag CXX --mode=relink g++ -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -module -avoid-version -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -o msm.la -rpath /usr/local/lib/JAGS/modules-4 msm_la-msm.lo distributions/msmdist.la functions/msmfunc.la matrix/msmmatrix.la ../../../src/jrmath/libjrmath.la ../../../src/lib/libjags.la -llapack -lblas -L/usr/local/lib/gcc5 -L/usr/local/lib -L/usr/local/bin -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.6/5.4.0 -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.6/5.4.0/../../../../../x86_64-portbld-dragonfly4.6/lib -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.6/5.4.0/../../.. -lgfortran -lm -lquadmath -inst-prefix-dir /wrkdirs/math/jags/stage) libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/crti.o /usr/lib/gcc50/crtbeginS.o .libs/msm_la-msm.o -Wl,--whole-archive distributions/.libs/msmdist.a functions/.libs/msmfunc.a matrix/.libs/msmmatrix.a -Wl,--no-whole-archive -Wl,-rpath -Wl,/usr/local/lib -L/usr/local/lib/gcc5 -L/usr/local/lib ../../../src/jrmath/.libs/libjrmath.so ../../../src/lib/.libs/libjags.so -llapack -lblas -L/usr/local/bin -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.6/5.4.0 -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.6/5.4.0/../../../../../x86_64-portbld-dragonfly4.6/lib -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.6/5.4.0/../../.. -lgfortran -lquadmath -L/usr/lib/gcc50 -lstdc++ -lm -lc -lgcc -lgcc_pic /usr/lib/gcc50/crtendS.o /usr/lib/crtn.o -O2 -Wl,-rpath=/usr/local/lib/gcc5 -B/usr/local/bin -Wl,-soname -Wl,msm.so -o .libs/msm.so libtool: install: /usr/bin/install -c .libs/msm.soT /wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4/msm.so libtool: install: /usr/bin/install -c .libs/msm.lai /wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4/msm.la libtool: install: warning: remember to run `libtool --finish /usr/local/lib/JAGS/modules-4' gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/msm' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/msm' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/msm' Making install in mix gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/mix' Making install in distributions gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/mix/distributions' gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/mix/distributions' gmake[6]: Nothing to be done for 'install-exec-am'. gmake[6]: Nothing to be done for 'install-data-am'. gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/mix/distributions' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/mix/distributions' Making install in samplers gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/mix/samplers' gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/mix/samplers' gmake[6]: Nothing to be done for 'install-exec-am'. gmake[6]: Nothing to be done for 'install-data-am'. gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/mix/samplers' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/mix/samplers' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/mix' gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/mix' gmake[6]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4' /bin/sh ../../../libtool --mode=install /usr/bin/install -c mix.la '/wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4' libtool: install: warning: relinking `mix.la' libtool: install: (cd /wrkdirs/math/jags/JAGS-4.0.0/src/modules/mix; /bin/sh /wrkdirs/math/jags/JAGS-4.0.0/libtool --tag CXX --mode=relink g++ -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -module -avoid-version -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -o mix.la -rpath /usr/local/lib/JAGS/modules-4 mix_la-mix.lo distributions/mixdist.la samplers/mixsamp.la ../../../src/jrmath/libjrmath.la ../../../src/lib/libjags.la -inst-prefix-dir /wrkdirs/math/jags/stage) libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/crti.o /usr/lib/gcc50/crtbeginS.o .libs/mix_la-mix.o -Wl,--whole-archive distributions/.libs/mixdist.a samplers/.libs/mixsamp.a -Wl,--no-whole-archive -Wl,-rpath -Wl,/usr/local/lib -L/usr/local/lib/gcc5 -L/usr/local/lib ../../../src/jrmath/.libs/libjrmath.so ../../../src/lib/.libs/libjags.so -L/usr/lib/gcc50 -lstdc++ -lm -lc -lgcc -lgcc_pic /usr/lib/gcc50/crtendS.o /usr/lib/crtn.o -O2 -Wl,-rpath=/usr/local/lib/gcc5 -B/usr/local/bin -Wl,-soname -Wl,mix.so -o .libs/mix.so libtool: install: /usr/bin/install -c .libs/mix.soT /wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4/mix.so libtool: install: /usr/bin/install -c .libs/mix.lai /wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4/mix.la libtool: install: warning: remember to run `libtool --finish /usr/local/lib/JAGS/modules-4' gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/mix' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/mix' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/mix' Making install in lecuyer gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/lecuyer' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/lecuyer' gmake[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4' /bin/sh ../../../libtool --mode=install /usr/bin/install -c lecuyer.la '/wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4' libtool: install: warning: relinking `lecuyer.la' libtool: install: (cd /wrkdirs/math/jags/JAGS-4.0.0/src/modules/lecuyer; /bin/sh /wrkdirs/math/jags/JAGS-4.0.0/libtool --tag CXX --mode=relink g++ -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -module -avoid-version -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -o lecuyer.la -rpath /usr/local/lib/JAGS/modules-4 lecuyer_la-lecuyer.lo lecuyer_la-RngStream.lo lecuyer_la-RngStreamFactory.lo ../../../src/lib/libjags.la -inst-prefix-dir /wrkdirs/math/jags/stage) libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/crti.o /usr/lib/gcc50/crtbeginS.o .libs/lecuyer_la-lecuyer.o .libs/lecuyer_la-RngStream.o .libs/lecuyer_la-RngStreamFactory.o -Wl,-rpath -Wl,/usr/local/lib -L/usr/local/lib/gcc5 -L/usr/local/lib ../../../src/lib/.libs/libjags.so -L/usr/lib/gcc50 -lstdc++ -lm -lc -lgcc -lgcc_pic /usr/lib/gcc50/crtendS.o /usr/lib/crtn.o -O2 -Wl,-rpath=/usr/local/lib/gcc5 -B/usr/local/bin -Wl,-soname -Wl,lecuyer.so -o .libs/lecuyer.so libtool: install: /usr/bin/install -c .libs/lecuyer.soT /wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4/lecuyer.so libtool: install: /usr/bin/install -c .libs/lecuyer.lai /wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4/lecuyer.la libtool: install: warning: remember to run `libtool --finish /usr/local/lib/JAGS/modules-4' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/lecuyer' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/lecuyer' Making install in glm gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm' Making install in CSparse gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/CSparse' gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/CSparse' gmake[6]: Nothing to be done for 'install-exec-am'. gmake[6]: Nothing to be done for 'install-data-am'. gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/CSparse' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/CSparse' Making install in SSparse gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse' Making install in UFconfig gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/UFconfig' gmake[7]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/UFconfig' gmake[7]: Nothing to be done for 'install-exec-am'. gmake[7]: Nothing to be done for 'install-data-am'. gmake[7]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/UFconfig' gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/UFconfig' Making install in AMD gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/AMD' gmake[7]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/AMD' gmake[7]: Nothing to be done for 'install-exec-am'. gmake[7]: Nothing to be done for 'install-data-am'. gmake[7]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/AMD' gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/AMD' Making install in COLAMD gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/COLAMD' gmake[7]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/COLAMD' gmake[7]: Nothing to be done for 'install-exec-am'. gmake[7]: Nothing to be done for 'install-data-am'. gmake[7]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/COLAMD' gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/COLAMD' Making install in CHOLMOD gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD' Making install in Check gmake[7]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Check' gmake[8]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Check' gmake[8]: Nothing to be done for 'install-exec-am'. gmake[8]: Nothing to be done for 'install-data-am'. gmake[8]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Check' gmake[7]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Check' Making install in Cholesky gmake[7]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Cholesky' gmake[8]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Cholesky' gmake[8]: Nothing to be done for 'install-exec-am'. gmake[8]: Nothing to be done for 'install-data-am'. gmake[8]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Cholesky' gmake[7]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Cholesky' Making install in Core gmake[7]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Core' gmake[8]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Core' gmake[8]: Nothing to be done for 'install-exec-am'. gmake[8]: Nothing to be done for 'install-data-am'. gmake[8]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Core' gmake[7]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Core' Making install in Include gmake[7]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Include' gmake[8]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Include' gmake[8]: Nothing to be done for 'install-exec-am'. gmake[8]: Nothing to be done for 'install-data-am'. gmake[8]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Include' gmake[7]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Include' Making install in MatrixOps gmake[7]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/MatrixOps' gmake[8]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/MatrixOps' gmake[8]: Nothing to be done for 'install-exec-am'. gmake[8]: Nothing to be done for 'install-data-am'. gmake[8]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/MatrixOps' gmake[7]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/MatrixOps' Making install in Modify gmake[7]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Modify' gmake[8]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Modify' gmake[8]: Nothing to be done for 'install-exec-am'. gmake[8]: Nothing to be done for 'install-data-am'. gmake[8]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Modify' gmake[7]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Modify' Making install in Supernodal gmake[7]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Supernodal' gmake[8]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Supernodal' gmake[8]: Nothing to be done for 'install-exec-am'. gmake[8]: Nothing to be done for 'install-data-am'. gmake[8]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Supernodal' gmake[7]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD/Supernodal' gmake[7]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD' gmake[8]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD' gmake[8]: Nothing to be done for 'install-exec-am'. gmake[8]: Nothing to be done for 'install-data-am'. gmake[8]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD' gmake[7]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD' gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse/CHOLMOD' gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse' gmake[7]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse' gmake[7]: Nothing to be done for 'install-exec-am'. gmake[7]: Nothing to be done for 'install-data-am'. gmake[7]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse' gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/SSparse' Making install in samplers gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/samplers' gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/samplers' gmake[6]: Nothing to be done for 'install-exec-am'. gmake[6]: Nothing to be done for 'install-data-am'. gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/samplers' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm/samplers' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm' gmake[6]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm' gmake[6]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4' /bin/sh ../../../libtool --mode=install /usr/bin/install -c glm.la '/wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4' libtool: install: warning: relinking `glm.la' libtool: install: (cd /wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm; /bin/sh /wrkdirs/math/jags/JAGS-4.0.0/libtool --tag CXX --mode=relink g++ -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -module -avoid-version -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -o glm.la -rpath /usr/local/lib/JAGS/modules-4 glm_la-glm.lo samplers/libglmsampler.la CSparse/csparse.la SSparse/ssparse.la ../../../src/lib/libjags.la ../../../src/jrmath/libjrmath.la -llapack -lblas -L/usr/local/lib/gcc5 -L/usr/local/lib -L/usr/local/bin -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.6/5.4.0 -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.6/5.4.0/../../../../../x86_64-portbld-dragonfly4.6/lib -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.6/5.4.0/../../.. -lgfortran -lm -lquadmath -inst-prefix-dir /wrkdirs/math/jags/stage) libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/crti.o /usr/lib/gcc50/crtbeginS.o .libs/glm_la-glm.o -Wl,--whole-archive samplers/.libs/libglmsampler.a CSparse/.libs/csparse.a SSparse/.libs/ssparse.a -Wl,--no-whole-archive -Wl,-rpath -Wl,/usr/local/lib -L/usr/local/lib/gcc5 -L/usr/local/lib ../../../src/lib/.libs/libjags.so ../../../src/jrmath/.libs/libjrmath.so -llapack -lblas -L/usr/local/bin -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.6/5.4.0 -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.6/5.4.0/../../../../../x86_64-portbld-dragonfly4.6/lib -L/usr/local/lib/gcc5/gcc/x86_64-portbld-dragonfly4.6/5.4.0/../../.. -lgfortran -lquadmath -L/usr/lib/gcc50 -lstdc++ -lm -lc -lgcc -lgcc_pic /usr/lib/gcc50/crtendS.o /usr/lib/crtn.o -O2 -Wl,-rpath=/usr/local/lib/gcc5 -B/usr/local/bin -Wl,-soname -Wl,glm.so -o .libs/glm.so libtool: install: /usr/bin/install -c .libs/glm.soT /wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4/glm.so libtool: install: /usr/bin/install -c .libs/glm.lai /wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4/glm.la libtool: install: warning: remember to run `libtool --finish /usr/local/lib/JAGS/modules-4' gmake[6]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/glm' Making install in dic gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/dic' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/dic' gmake[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4' /bin/sh ../../../libtool --mode=install /usr/bin/install -c dic.la '/wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4' libtool: install: warning: relinking `dic.la' libtool: install: (cd /wrkdirs/math/jags/JAGS-4.0.0/src/modules/dic; /bin/sh /wrkdirs/math/jags/JAGS-4.0.0/libtool --tag CXX --mode=relink g++ -pipe -isystem /usr/local/include -O2 -fno-strict-aliasing -isystem /usr/local/include -module -avoid-version -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -o dic.la -rpath /usr/local/lib/JAGS/modules-4 dic_la-dic.lo dic_la-DevianceMean.lo dic_la-DevianceTrace.lo dic_la-DevianceMonitorFactory.lo dic_la-PDMonitor.lo dic_la-PoptMonitor.lo dic_la-PDMonitorFactory.lo dic_la-PDTrace.lo dic_la-PDTraceFactory.lo ../../../src/lib/libjags.la -inst-prefix-dir /wrkdirs/math/jags/stage) libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/crti.o /usr/lib/gcc50/crtbeginS.o .libs/dic_la-dic.o .libs/dic_la-DevianceMean.o .libs/dic_la-DevianceTrace.o .libs/dic_la-DevianceMonitorFactory.o .libs/dic_la-PDMonitor.o .libs/dic_la-PoptMonitor.o .libs/dic_la-PDMonitorFactory.o .libs/dic_la-PDTrace.o .libs/dic_la-PDTraceFactory.o -Wl,-rpath -Wl,/usr/local/lib -L/usr/local/lib/gcc5 -L/usr/local/lib ../../../src/lib/.libs/libjags.so -L/usr/lib/gcc50 -lstdc++ -lm -lc -lgcc -lgcc_pic /usr/lib/gcc50/crtendS.o /usr/lib/crtn.o -O2 -Wl,-rpath=/usr/local/lib/gcc5 -B/usr/local/bin -Wl,-soname -Wl,dic.so -o .libs/dic.so libtool: install: /usr/bin/install -c .libs/dic.soT /wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4/dic.so libtool: install: /usr/bin/install -c .libs/dic.lai /wrkdirs/math/jags/stage/usr/local/lib/JAGS/modules-4/dic.la libtool: install: warning: remember to run `libtool --finish /usr/local/lib/JAGS/modules-4' gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/dic' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules/dic' gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules' gmake[5]: Nothing to be done for 'install-exec-am'. gmake[5]: Nothing to be done for 'install-data-am'. gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules' gmake[3]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/modules' Making install in terminal gmake[3]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/terminal' gmake install-am gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/terminal' gmake[5]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src/terminal' /bin/mkdir -p '/wrkdirs/math/jags/stage/usr/local/bin' install -m 555 mcmc-jags '/wrkdirs/math/jags/stage/usr/local/bin' /bin/mkdir -p '/wrkdirs/math/jags/stage/usr/local/libexec' /bin/sh ../../libtool --mode=install install -s -m 555 jags-terminal '/wrkdirs/math/jags/stage/usr/local/libexec' libtool: install: warning: `../../src/lib/libjags.la' has not been installed in `/usr/local/lib' libtool: install: install -m 555 -s .libs/jags-terminal /wrkdirs/math/jags/stage/usr/local/libexec/jags-terminal gmake[5]: Nothing to be done for 'install-data-am'. gmake[5]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/terminal' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/terminal' gmake[3]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src/terminal' gmake[3]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src' gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/src' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src' gmake[3]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src' gmake[2]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/src' Making install in etc gmake[2]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/etc' gmake[3]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/etc' gmake[3]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/wrkdirs/math/jags/stage/usr/local/libdata/pkgconfig' install -m 0644 jags.pc '/wrkdirs/math/jags/stage/usr/local/libdata/pkgconfig' gmake[3]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/etc' gmake[2]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/etc' Making install in win gmake[2]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/win' Making install in runtime32 gmake[3]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/win/runtime32' gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/win/runtime32' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/win/runtime32' gmake[3]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/win/runtime32' Making install in runtime64 gmake[3]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/win/runtime64' gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/win/runtime64' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/win/runtime64' gmake[3]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/win/runtime64' gmake[3]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/win' gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/win' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/win' gmake[3]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/win' gmake[2]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/win' Making install in doc gmake[2]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/doc' Making install in manual gmake[3]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/doc/manual' gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/doc/manual' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/doc/manual' gmake[3]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/doc/manual' gmake[3]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/doc' gmake[4]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/doc' gmake[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/wrkdirs/math/jags/stage/usr/local/man/man1' install -m 0644 jags.1 '/wrkdirs/math/jags/stage/usr/local/man/man1' gmake[4]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/doc' gmake[3]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/doc' gmake[2]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/doc' Making install in test gmake[2]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/test' gmake[3]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0/test' gmake[3]: Nothing to be done for 'install-exec-am'. gmake[3]: Nothing to be done for 'install-data-am'. gmake[3]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/test' gmake[2]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0/test' gmake[2]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0' gmake[3]: Entering directory '/wrkdirs/math/jags/JAGS-4.0.0' gmake[3]: Nothing to be done for 'install-exec-am'. gmake[3]: Nothing to be done for 'install-data-am'. gmake[3]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0' gmake[2]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0' gmake[1]: Leaving directory '/wrkdirs/math/jags/JAGS-4.0.0' ====> Compressing man pages (compress-man) =========================================================================== =================================================== ===> Building package for mcmc-jags-4.0.0 file sizes/checksums [441]: ..... done packing files [441]: ..... done packing directories [0]: . done =========================================================================== => Cleaning up wrkdir ===> Cleaning for mcmc-jags-4.0.0 build of math/jags ended at Sun Oct 9 09:36:00 PDT 2016 build time: 00:03:56