=> Building science/gromacs build started at Sun Oct 9 12:17:32 PDT 2016 port directory: /usr/ports/science/gromacs building for: DragonFly pkgbox64.dragonflybsd.org 4.7-DEVELOPMENT DragonFly v4.7.0.78.g7d868-DEVELOPMENT #7: Mon Aug 1 22:25:32 PDT 2016 root@pkgbox64.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 maintained by: freebsd@skysmurf.nl ident warning: no id keywords in /build/boomdata/data/.m/Release46-default/ref/../02//usr/ports/science/gromacs/Makefile Makefile ident: Poudriere version: 3.1-pre Host OSVERSION: 400700 Jail OSVERSION: 400600 ---Begin Environment--- STATUS=1 SAVED_TERM=screen MASTERMNT=/build/boomdata/data/.m/Release46-default/ref PATH=/usr/local/libexec/poudriere:/sbin:/bin:/usr/sbin:/usr/bin:/usr/pkg/bin:/usr/pkg/sbin:/usr/games:/usr/local/sbin:/usr/local/bin:/usr/pkg/xorg/bin:/usr/X11R6/bin:/root/bin:/sbin:/usr/sbin POUDRIERE_BUILD_TYPE=bulk PKGNAME=gromacs-5.0.6 OLDPWD=/root/boom PWD=/build/boomdata/data/.m/Release46-default/ref/.p/pool MASTERNAME=Release46-default TERM=cons25 USER=root HOME=/root POUDRIERE_VERSION=3.1-pre LOCALBASE=/usr/local PACKAGE_BUILDING=yes ---End Environment--- ---Begin OPTIONS List--- ===> The following configuration options are available for gromacs-5.0.6: ATLAS=off: Use ATLAS for BLAS and LAPACK FLOAT=on: Use single instead of double precision OPENMP=on: Parallel processing support via OpenMP SIMD=off: Use CPU-specific optimizations X11=on: X11 (graphics) support ====> MPI (Message Passing Interface) support: you can only select none or one of them MPICH2=off: Parallel processing support via MPICH2 OPENMPI=off: Parallel processing support via Open MPI ===> Use 'make config' to modify these settings ---End OPTIONS List--- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran5" FC="gfortran5" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc5" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc5" ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl PKG_CONFIG=pkgconf XDG_DATA_HOME=/wrkdirs/science/gromacs XDG_CONFIG_HOME=/wrkdirs/science/gromacs HOME=/wrkdirs/science/gromacs TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc50 --End CONFIGURE_ENV-- --MAKE_ENV-- F77="gfortran5" FC="gfortran5" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc5" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc5" XDG_DATA_HOME=/wrkdirs/science/gromacs XDG_CONFIG_HOME=/wrkdirs/science/gromacs HOME=/wrkdirs/science/gromacs TMPDIR="/tmp" NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc50 ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib" LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 444" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- ATLAS="@comment " NO_ATLAS="" FLOAT="" NO_FLOAT="@comment " OPENMP="" NO_OPENMP="@comment " SIMD="@comment " NO_SIMD="" X11="" NO_X11="@comment " MPICH2="@comment " NO_MPICH2="" OPENMPI="@comment " NO_OPENMPI="" SUFFIX_D="" SUFFIX_MPI="" CMAKE_BUILD_TYPE="release" GTK2_VERSION="2.10.0" GTK3_VERSION="3.0.0" OSREL=4.6 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local PORTDOCS="" PORTEXAMPLES="" LIB32DIR=lib PERL_VERSION=5.20.3 PERL_VER=5.20 PERL5_MAN1=lib/perl5/site_perl/man/man1 PERL5_MAN3=lib/perl5/site_perl/man/man3 SITE_PERL=lib/perl5/site_perl SITE_ARCH=lib/perl5/site_perl/mach/5.20 PROFILE="@comment " DOCSDIR="share/doc/gromacs" EXAMPLESDIR="share/examples/gromacs" DATADIR="share/gromacs" WWWDIR="www/gromacs" ETCDIR="etc/gromacs" --End PLIST_SUB-- --SUB_LIST-- ATLAS="@comment " NO_ATLAS="" FLOAT="" NO_FLOAT="@comment " OPENMP="" NO_OPENMP="@comment " SIMD="@comment " NO_SIMD="" X11="" NO_X11="@comment " MPICH2="@comment " NO_MPICH2="" OPENMPI="@comment " NO_OPENMPI="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/gromacs DOCSDIR=/usr/local/share/doc/gromacs EXAMPLESDIR=/usr/local/share/examples/gromacs WWWDIR=/usr/local/www/gromacs ETCDIR=/usr/local/etc/gromacs --End SUB_LIST-- ---Begin make.conf--- NO_BACKUP=yes USE_PACKAGE_DEPENDS=yes PKG_CREATE_VERBOSE=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORT_DBDIR=/options PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles MAKE_JOBS_NUMBER=5 ---End make.conf--- =================================================== ===> License LGPL21 accepted by the user =========================================================================== =================================================== ===> gromacs-5.0.6 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.8.7_3.txz Installing pkg-1.8.7_3... Extracting pkg-1.8.7_3: .......... done ===> gromacs-5.0.6 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of gromacs-5.0.6 =========================================================================== =================================================== =========================================================================== =================================================== ===> License LGPL21 accepted by the user ===> Fetching all distfiles required by gromacs-5.0.6 for building =========================================================================== =================================================== ===> License LGPL21 accepted by the user ===> Fetching all distfiles required by gromacs-5.0.6 for building => SHA256 Checksum OK for gromacs-5.0.6.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> License LGPL21 accepted by the user ===> Fetching all distfiles required by gromacs-5.0.6 for building ===> Extracting for gromacs-5.0.6 => SHA256 Checksum OK for gromacs-5.0.6.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for gromacs-5.0.6 ===> Applying ports patches for gromacs-5.0.6 =========================================================================== =================================================== ===> gromacs-5.0.6 depends on package: boost-libs>=1.44 - not found ===> Installing existing package /packages/All/boost-libs-1.55.0_13.txz Installing boost-libs-1.55.0_13... `-- Installing icu-57.1,1... `-- Extracting icu-57.1,1: .......... done Extracting boost-libs-1.55.0_13: .......... done Message from boost-libs-1.55.0_13: You have built the Boost library with thread support. Don't forget to add -pthread to your linker options when linking your code. ===> gromacs-5.0.6 depends on package: boost-libs>=1.44 - found ===> Returning to build of gromacs-5.0.6 ===> gromacs-5.0.6 depends on package: fftw3>0 - not found ===> Installing existing package /packages/All/fftw3-3.3.3_2.txz Installing fftw3-3.3.3_2... `-- Installing indexinfo-0.2.5... `-- Extracting indexinfo-0.2.5: .... done Extracting fftw3-3.3.3_2: .......... done Message from fftw3-3.3.3_2: ===> NOTICE: The fftw3 port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> gromacs-5.0.6 depends on package: fftw3>0 - found ===> Returning to build of gromacs-5.0.6 ===> gromacs-5.0.6 depends on file: /usr/local/bin/cmake - not found ===> Installing existing package /packages/All/cmake-3.6.2.txz Installing cmake-3.6.2... `-- Installing expat-2.2.0... `-- Extracting expat-2.2.0: .......... done `-- Installing cmake-modules-3.6.2... `-- Extracting cmake-modules-3.6.2: .......... done `-- Installing curl-7.50.3... | `-- Installing ca_root_nss-3.27... | `-- Extracting ca_root_nss-3.27: ....... done | `-- Installing krb5-1.14.4... | | `-- Installing pkgconf-1.0.1... | | `-- Extracting pkgconf-1.0.1: .......... done | | `-- Installing gettext-runtime-0.19.8.1... | | `-- Extracting gettext-runtime-0.19.8.1: .......... done | `-- Extracting krb5-1.14.4: .......... done `-- Extracting curl-7.50.3: .......... done `-- Installing libarchive-3.2.1,1... | `-- Installing liblz4-131... | `-- Extracting liblz4-131: .......... done | `-- Installing lzo2-2.09... | `-- Extracting lzo2-2.09: .......... done `-- Extracting libarchive-3.2.1,1: .......... done `-- Installing jsoncpp-1.7.3... `-- Extracting jsoncpp-1.7.3: .......... done `-- Installing ncurses-6.0_5... `-- Extracting ncurses-6.0_5: .......... done Extracting cmake-3.6.2: .......... done Message from ca_root_nss-3.27: ********************************* WARNING ********************************* FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. *********************************** NOTE ********************************** This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem *************************************************************************** Message from ncurses-6.0_5: ===> NOTICE: The ncurses port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> gromacs-5.0.6 depends on file: /usr/local/bin/cmake - found ===> Returning to build of gromacs-5.0.6 ===> gromacs-5.0.6 depends on executable: gfortran5 - not found ===> Installing existing package /packages/All/gcc5-5.4.0.txz Installing gcc5-5.4.0... `-- Installing mpc-1.0.3... | `-- Installing gmp-5.1.3_3... | `-- Extracting gmp-5.1.3_3: .......... done | `-- Installing mpfr-3.1.5... | `-- Extracting mpfr-3.1.5: .......... done `-- Extracting mpc-1.0.3: ...... done `-- Installing binutils-2.27_4,1... `-- Extracting binutils-2.27_4,1: .......... done Extracting gcc5-5.4.0: .......... done Message from gcc5-5.4.0: To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc5 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===> gromacs-5.0.6 depends on executable: gfortran5 - found ===> Returning to build of gromacs-5.0.6 ===> gromacs-5.0.6 depends on package: pkgconf>=0.9.10 - found ===> gromacs-5.0.6 depends on file: /usr/local/bin/as - found ===> gromacs-5.0.6 depends on file: /usr/local/libdata/pkgconfig/xext.pc - not found ===> Installing existing package /packages/All/libXext-1.3.3_1,1.txz Installing libXext-1.3.3_1,1... `-- Installing xproto-7.0.28... `-- Extracting xproto-7.0.28: .......... done `-- Installing libXau-1.0.8_3... `-- Extracting libXau-1.0.8_3: .......... done `-- Installing libX11-1.6.3,1... | `-- Installing kbproto-1.0.7... | `-- Extracting kbproto-1.0.7: .......... done | `-- Installing libXdmcp-1.1.2... | `-- Extracting libXdmcp-1.1.2: ......... done | `-- Installing libxcb-1.11.1... | | `-- Installing libxml2-2.9.4... | | `-- Extracting libxml2-2.9.4: .......... done | | `-- Installing libpthread-stubs-0.3_6... | | `-- Extracting libpthread-stubs-0.3_6: ..... done | `-- Extracting libxcb-1.11.1: .......... done `-- Extracting libX11-1.6.3,1: .......... done `-- Installing xextproto-7.3.0... `-- Extracting xextproto-7.3.0: .......... done Extracting libXext-1.3.3_1,1: .......... done ===> gromacs-5.0.6 depends on file: /usr/local/libdata/pkgconfig/xext.pc - found ===> Returning to build of gromacs-5.0.6 ===> gromacs-5.0.6 depends on file: /usr/local/libdata/pkgconfig/x11.pc - found ===> gromacs-5.0.6 depends on package: perl5>=5.20<5.21 - not found ===> Installing existing package /packages/All/perl5-5.20.3_15.txz Installing perl5-5.20.3_15... Extracting perl5-5.20.3_15: .......... done Message from perl5-5.20.3_15: The /usr/bin/perl symlink has been removed starting with Perl 5.20. For shebangs, you should either use: #!/usr/local/bin/perl or #!/usr/bin/env perl The first one will only work if you have a /usr/local/bin/perl, the second will work as long as perl is in PATH. ===> gromacs-5.0.6 depends on package: perl5>=5.20<5.21 - found ===> Returning to build of gromacs-5.0.6 =========================================================================== =================================================== ===> gromacs-5.0.6 depends on shared library: libfftw3f.so - not found ===> Installing existing package /packages/All/fftw3-float-3.3.3_2.txz Installing fftw3-float-3.3.3_2... Extracting fftw3-float-3.3.3_2: .......... done Message from fftw3-float-3.3.3_2: ===> NOTICE: The fftw3-float port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> gromacs-5.0.6 depends on shared library: libfftw3f.so - found (/usr/local/lib/libfftw3f.so) ===> Returning to build of gromacs-5.0.6 ===> gromacs-5.0.6 depends on shared library: libblas.so - not found ===> Installing existing package /packages/All/blas-3.5.0_3.txz Installing blas-3.5.0_3... Extracting blas-3.5.0_3: ....... done ===> gromacs-5.0.6 depends on shared library: libblas.so - found (/usr/local/lib/libblas.so) ===> Returning to build of gromacs-5.0.6 ===> gromacs-5.0.6 depends on shared library: liblapack.so - not found ===> Installing existing package /packages/All/lapack-3.5.0.txz Installing lapack-3.5.0... Extracting lapack-3.5.0: .......... done ===> gromacs-5.0.6 depends on shared library: liblapack.so - found (/usr/local/lib/liblapack.so) ===> Returning to build of gromacs-5.0.6 ===> gromacs-5.0.6 depends on shared library: libxml2.so - found (/usr/local/lib/libxml2.so) =========================================================================== =================================================== ===> Configuring for gromacs-5.0.6 ===> Performing in-source build /bin/mkdir -p /wrkdirs/science/gromacs/gromacs-5.0.6 -- The C compiler identification is GNU 5.3.1 -- The CXX compiler identification is GNU 5.3.1 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Looking for NVIDIA GPUs present in the system -- Could not detect NVIDIA GPUs -- No compatible CUDA toolkit found (v4.0+), disabling native GPU acceleration -- Try OpenMP C flag = [-fopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Success -- Try OpenMP CXX flag = [-fopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Success -- Found OpenMP: -fopenmp -- Performing Test CFLAGS_WARN -- Performing Test CFLAGS_WARN - Success -- Performing Test CFLAGS_WARN_EXTRA -- Performing Test CFLAGS_WARN_EXTRA - Success -- Performing Test CFLAGS_WARN_REL -- Performing Test CFLAGS_WARN_REL - Success -- Performing Test CFLAGS_WARN_UNINIT -- Performing Test CFLAGS_WARN_UNINIT - Success -- Performing Test CFLAGS_EXCESS_PREC -- Performing Test CFLAGS_EXCESS_PREC - Success -- Performing Test CFLAGS_COPT -- Performing Test CFLAGS_COPT - Success -- Performing Test CFLAGS_NOINLINE -- Performing Test CFLAGS_NOINLINE - Success -- Performing Test CXXFLAGS_WARN -- Performing Test CXXFLAGS_WARN - Success -- Performing Test CXXFLAGS_WARN_EXTRA -- Performing Test CXXFLAGS_WARN_EXTRA - Success -- Performing Test CXXFLAGS_WARN_REL -- Performing Test CXXFLAGS_WARN_REL - Success -- Performing Test CXXFLAGS_EXCESS_PREC -- Performing Test CXXFLAGS_EXCESS_PREC - Success -- Performing Test CXXFLAGS_COPT -- Performing Test CXXFLAGS_COPT - Success -- Performing Test CXXFLAGS_NOINLINE -- Performing Test CXXFLAGS_NOINLINE - Success -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file pwd.h -- Looking for include file pwd.h - found -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file time.h -- Looking for include file time.h - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include file io.h -- Looking for include file io.h - not found -- Looking for include file sched.h -- Looking for include file sched.h - found -- Looking for include file regex.h -- Looking for include file regex.h - found -- Looking for posix_memalign -- Looking for posix_memalign - found -- Looking for memalign -- Looking for memalign - not found -- Looking for _aligned_malloc -- Looking for _aligned_malloc - not found -- Looking for gettimeofday -- Looking for gettimeofday - found -- Looking for fsync -- Looking for fsync - found -- Looking for _fileno -- Looking for _fileno - not found -- Looking for fileno -- Looking for fileno - found -- Looking for _commit -- Looking for _commit - not found -- Looking for sigaction -- Looking for sigaction - found -- Looking for sysconf -- Looking for sysconf - found -- Looking for rsqrt -- Looking for rsqrt - not found -- Looking for rsqrtf -- Looking for rsqrtf - not found -- Looking for sqrtf -- Looking for sqrtf - not found -- Looking for sqrt in m -- Looking for sqrt in m - found -- Looking for clock_gettime in rt -- Looking for clock_gettime in rt - found -- Checking for sched.h GNU affinity API -- Performing Test sched_affinity_compile -- Performing Test sched_affinity_compile - Failed -- Check if the system is big endian -- Searching 16 bit integer -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- Looking for zlibVersion in /usr/lib/libz.so -- Looking for zlibVersion in /usr/lib/libz.so - found -- Found LibXml2: /usr/local/lib/libxml2.so (found version "2.9.4") -- Looking for xmlTextWriterEndAttribute in /usr/local/lib/libxml2.so -- Looking for xmlTextWriterEndAttribute in /usr/local/lib/libxml2.so - found -- Looking for include file libxml/parser.h -- Looking for include file libxml/parser.h - found -- Looking for XOpenDisplay in /usr/local/lib/libX11.so;/usr/local/lib/libXext.so -- Looking for XOpenDisplay in /usr/local/lib/libX11.so;/usr/local/lib/libXext.so - found -- Looking for gethostbyname -- Looking for gethostbyname - found -- Looking for connect -- Looking for connect - found -- Looking for remove -- Looking for remove - found -- Looking for shmat -- Looking for shmat - found -- Found X11: /usr/local/lib/libX11.so -- Looking for pthread.h -- Looking for pthread.h - found -- Found Threads: TRUE -- Looking for include file pthread.h -- Looking for include file pthread.h - found -- Atomic operations found -- Performing Test PTHREAD_SETAFFINITY -- Performing Test PTHREAD_SETAFFINITY - Failed -- Boost version: 1.55.0 -- Checking for GCC x86 inline asm -- Checking for GCC x86 inline asm - supported -- Setting build user/date/host/cpu information -- Setting build user & time - OK -- Checking floating point format -- Checking floating point format - IEEE754 (LE byte, LE word) -- Checking for 64-bit off_t -- Checking for 64-bit off_t - present -- Checking for fseeko/ftello -- Checking for fseeko/ftello - present -- Checking for SIGUSR1 -- Checking for SIGUSR1 - found -- Checking for pipe support -- Checking for isfinite -- Performing Test isfinite_compile_ok -- Performing Test isfinite_compile_ok - Success -- Checking for isfinite - yes -- Checking for _isfinite -- Performing Test _isfinite_compile_ok -- Performing Test _isfinite_compile_ok - Failed -- Checking for _isfinite - no -- Checking for _finite -- Performing Test _finite_compile_ok -- Performing Test _finite_compile_ok - Failed -- Checking for _finite - no -- Performing Test CXXFLAG_STD_CXX0X -- Performing Test CXXFLAG_STD_CXX0X - Success -- Performing Test GMX_CXX11_SUPPORTED -- Performing Test GMX_CXX11_SUPPORTED - Success -- Looking for C++ include regex -- Looking for C++ include regex - not found -- Checking for system XDR support -- Checking for system XDR support - present -- SIMD instructions disabled -- Performing Test _callconv___vectorcall -- Performing Test _callconv___vectorcall - Failed -- Performing Test _callconv___regcall -- Performing Test _callconv___regcall - Failed -- Performing Test _callconv_ -- Performing Test _callconv_ - Success -- Checking for module 'fftw3f' -- Found fftw3f, version 3.3.3 -- Looking for fftwf_plan_r2r_1d in /usr/local/lib/libfftw3f.so -- Looking for fftwf_plan_r2r_1d in /usr/local/lib/libfftw3f.so - found -- Looking for fftwf_have_simd_sse in /usr/local/lib/libfftw3f.so -- Looking for fftwf_have_simd_sse in /usr/local/lib/libfftw3f.so - not found -- Looking for fftwf_have_simd_sse2 in /usr/local/lib/libfftw3f.so -- Looking for fftwf_have_simd_sse2 in /usr/local/lib/libfftw3f.so - found -- Looking for fftwf_have_simd_avx_128 in /usr/local/lib/libfftw3f.so -- Looking for fftwf_have_simd_avx_128 in /usr/local/lib/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx2_128 in /usr/local/lib/libfftw3f.so -- Looking for fftwf_have_simd_avx2_128 in /usr/local/lib/libfftw3f.so - not found -- Looking for fftwf_have_simd_sse2 in /usr/local/lib/libfftw3f.so -- Looking for fftwf_have_simd_sse2 in /usr/local/lib/libfftw3f.so - found -- Using external FFT library - FFTW3 -- A library with BLAS API found. -- A library with LAPACK API found. -- Checking for dlopen -- Performing Test HAVE_DLOPEN -- Performing Test HAVE_DLOPEN - Success -- Checking for dlopen - found -- Using dynamic plugins (e.g VMD-supported file formats) -- Checking for suitable VMD version -- VMD plugins not found. Path to VMD can be set with VMDDIR. -- Using default binary suffix: "" -- Using default library suffix: "" -- Could NOT find Pandoc (missing: PANDOC_EXECUTABLE) -- Could NOT find PythonInterp (missing: PYTHON_EXECUTABLE) -- Performing Test HAS_NO_UNUSED_VARIABLE -- Performing Test HAS_NO_UNUSED_VARIABLE - Success -- Check if the system is big endian -- Searching 16 bit integer -- Using unsigned short -- Check if the system is big endian - little endian -- Looking for inttypes.h -- Looking for inttypes.h - found -- Performing Test HAS_NO_UNUSED_PARAMETER -- Performing Test HAS_NO_UNUSED_PARAMETER - Success -- Performing Test HAS_NO_DEPRECATED_REGISTER -- Performing Test HAS_NO_DEPRECATED_REGISTER - Success -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_MODULE_LINKER_FLAGS CMAKE_NO_BUILTIN_CHRPATH -- Build files have been written to: /wrkdirs/science/gromacs/gromacs-5.0.6 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-I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/fixpoint.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/src/compression/fixpoint.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/huffman.c.o --- [ 4%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/huffman.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/huffman.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/src/compression/huffman.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/dict.c.o --- [ 4%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/dict.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/dict.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/src/compression/dict.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/huffmem.c.o --- [ 4%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/huffmem.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/huffmem.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/src/compression/huffmem.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/lz77.c.o --- [ 4%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/lz77.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/lz77.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/src/compression/lz77.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/merge_sort.c.o --- [ 4%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/merge_sort.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/merge_sort.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/src/compression/merge_sort.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/mtf.c.o --- [ 4%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/mtf.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/mtf.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/src/compression/mtf.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/rle.c.o --- [ 4%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/rle.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/rle.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/src/compression/rle.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/tng_compress.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/vals16.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/tng_compress.c.o --- [ 4%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/tng_compress.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/tng_compress.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/src/compression/tng_compress.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/warnmalloc.c.o --- [ 4%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/warnmalloc.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/warnmalloc.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/src/compression/warnmalloc.c --- src/programs/CMakeFiles/mdrun_objlib.dir/all --- [ 4%] Built target mdrun_objlib --- src/gromacs/CMakeFiles/libgromacs.dir/all --- --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/vals16.c.o --- [ 5%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/vals16.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/vals16.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/src/compression/vals16.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/widemuldiv.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/xtc2.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/xtc3.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/widemuldiv.c.o --- [ 5%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/widemuldiv.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/widemuldiv.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/src/compression/widemuldiv.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/xtc3.c.o --- [ 5%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/xtc3.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/xtc3.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/src/compression/xtc3.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/lib/tng_io.c.o --- [ 5%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/lib/tng_io.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -DUSE_STD_INTTYPES_H -DUSE_ZLIB -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/tng_io/src/lib/tng_io.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/src/lib/tng_io.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/xtc2.c.o --- [ 5%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/xtc2.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/xtc2.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/src/compression/xtc2.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/lib/md5.c.o --- [ 5%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/lib/md5.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/tng_io/src/lib/md5.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/src/lib/md5.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/add_par.c.o --- [ 5%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/add_par.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/add_par.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/add_par.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/addconf.c.o --- [ 5%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/addconf.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/addconf.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/addconf.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/calc_verletbuf.c.o --- [ 5%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/calc_verletbuf.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/calc_verletbuf.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/calc_verletbuf.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/compute_io.c.o --- [ 6%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/compute_io.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/compute_io.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/compute_io.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/convparm.c.o --- [ 6%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/convparm.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/convparm.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/convparm.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/gen_ad.c.o --- [ 6%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/gen_ad.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/gen_ad.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/gen_ad.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/gen_maxwell_velocities.c.o --- [ 6%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/gen_maxwell_velocities.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/gen_maxwell_velocities.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/gen_maxwell_velocities.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/gen_vsite.c.o --- [ 6%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/gen_vsite.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/gen_vsite.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/gen_vsite.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/genconf.c.o --- [ 6%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/genconf.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/genconf.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/genconf.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/genhydro.c.o --- [ 6%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/genhydro.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/genhydro.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/genhydro.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/gmxcpp.c.o --- [ 6%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/gmxcpp.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/gmxcpp.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/gmxcpp.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/gpp_atomtype.c.o --- [ 6%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/gpp_atomtype.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/gpp_atomtype.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/gpp_atomtype.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/gpp_bond_atomtype.c.o --- [ 7%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/gpp_bond_atomtype.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/gpp_bond_atomtype.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/gpp_bond_atomtype.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/gpp_nextnb.c.o --- [ 7%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/gpp_nextnb.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/gpp_nextnb.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/gpp_nextnb.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/grompp.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/h_db.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/grompp.c.o --- [ 7%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/grompp.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/grompp.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/grompp.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/h_db.c.o --- [ 7%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/h_db.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/h_db.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/h_db.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/hackblock.c.o --- [ 7%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/hackblock.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/hackblock.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/hackblock.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/hizzie.c.o --- [ 7%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/hizzie.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/hizzie.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/hizzie.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/nm2type.c.o --- [ 7%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/nm2type.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/nm2type.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/nm2type.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/pdb2gmx.c.o --- [ 7%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/pdb2gmx.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/pdb2gmx.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/pdb2gmx.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/pgutil.c.o --- [ 7%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/pgutil.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/pgutil.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/pgutil.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/protonate.c.o --- [ 7%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/protonate.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/protonate.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/protonate.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/readadress.c.o --- [ 8%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/readadress.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/readadress.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/readadress.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/readir.c.o --- [ 8%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/readir.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/readir.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/readir.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/readpull.c.o --- [ 8%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/readpull.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/readpull.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/readpull.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/readrot.c.o --- [ 8%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/readrot.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/readrot.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/readrot.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/resall.c.o --- [ 8%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/resall.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/resall.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/resall.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/sortwater.c.o --- [ 8%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/sortwater.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/sortwater.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/sortwater.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/specbond.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/ter_db.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/specbond.c.o --- [ 8%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/specbond.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/specbond.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/specbond.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/ter_db.c.o --- [ 8%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/ter_db.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/ter_db.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/ter_db.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/tomorse.c.o --- [ 8%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/tomorse.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/tomorse.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/tomorse.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/topdirs.c.o --- [ 10%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/topdirs.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/topdirs.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/topdirs.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/topio.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/toppush.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/topio.c.o --- [ 10%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/topio.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/topio.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/topio.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/toppush.c.o --- [ 10%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/toppush.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/toppush.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/toppush.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/topshake.c.o --- [ 10%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/topshake.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/topshake.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/topshake.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/toputil.c.o --- [ 10%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/toputil.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/toputil.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/toputil.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/vsite_parm.c.o --- [ 10%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/vsite_parm.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/vsite_parm.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/vsite_parm.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/x2top.c.o --- [ 10%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/x2top.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/x2top.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/x2top.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/xlate.c.o --- [ 10%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/xlate.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/xlate.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/xlate.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/fflibutil.cpp.o --- [ 10%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/fflibutil.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/fflibutil.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/fflibutil.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/insert-molecules.cpp.o --- [ 11%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/insert-molecules.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include 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-Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/read-conformation.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/read-conformation.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/solvate.cpp.o --- [ 11%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/solvate.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/solvate.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxpreprocess/solvate.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/commandline/cmdlinehelpcontext.cpp.o --- [ 11%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/commandline/cmdlinehelpcontext.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlinehelpcontext.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/commandline/cmdlinehelpcontext.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/commandline/cmdlinehelpmodule.cpp.o --- [ 11%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/commandline/cmdlinehelpmodule.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlinehelpmodule.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/commandline/cmdlinehelpmodule.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/commandline/cmdlinehelpwriter.cpp.o --- [ 11%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/commandline/cmdlinehelpwriter.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlinehelpwriter.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/commandline/cmdlinehelpwriter.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/commandline/cmdlineinit.cpp.o --- [ 11%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/commandline/cmdlineinit.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlineinit.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/commandline/cmdlineinit.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/commandline/cmdlinemodulemanager.cpp.o --- [ 11%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/commandline/cmdlinemodulemanager.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlinemodulemanager.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/commandline/cmdlinemodulemanager.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/commandline/cmdlineparser.cpp.o --- [ 11%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/commandline/cmdlineparser.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlineparser.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/commandline/cmdlineparser.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/commandline/cmdlineprogramcontext.cpp.o --- [ 12%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/commandline/cmdlineprogramcontext.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlineprogramcontext.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/commandline/cmdlineprogramcontext.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/commandline/pargs.cpp.o --- [ 12%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/commandline/pargs.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/pargs.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/commandline/pargs.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/commandline/shellcompletions.cpp.o --- [ 12%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/commandline/shellcompletions.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/shellcompletions.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/commandline/shellcompletions.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/fft/fft.c.o --- [ 12%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/fft/fft.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fft/fft.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/fft/fft.c --- src/gromacs/CMakeFiles/libgromacs.dir/fft/fft5d.cpp.o --- [ 12%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fft/fft5d.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fft/fft5d.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/fft/fft5d.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/fft/parallel_3dfft.c.o --- [ 12%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/fft/parallel_3dfft.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fft/parallel_3dfft.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/fft/parallel_3dfft.c --- src/gromacs/CMakeFiles/libgromacs.dir/fft/fft_fftw3.cpp.o --- [ 12%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fft/fft_fftw3.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fft/fft_fftw3.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/fft/fft_fftw3.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/linearalgebra/eigensolver.c.o --- [ 12%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/linearalgebra/eigensolver.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/linearalgebra/eigensolver.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/linearalgebra/eigensolver.c --- src/gromacs/CMakeFiles/libgromacs.dir/linearalgebra/gmx_arpack.c.o --- [ 12%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/linearalgebra/gmx_arpack.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/linearalgebra/gmx_arpack.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/linearalgebra/gmx_arpack.c --- src/gromacs/CMakeFiles/libgromacs.dir/linearalgebra/matrix.c.o --- [ 13%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/linearalgebra/matrix.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/linearalgebra/matrix.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/linearalgebra/matrix.c --- src/gromacs/CMakeFiles/libgromacs.dir/linearalgebra/mtxio.c.o --- [ 13%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/linearalgebra/mtxio.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/linearalgebra/mtxio.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/linearalgebra/mtxio.c --- src/gromacs/CMakeFiles/libgromacs.dir/linearalgebra/nrjac.c.o --- [ 13%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/linearalgebra/nrjac.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized 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/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/random/random.c --- src/gromacs/CMakeFiles/libgromacs.dir/onlinehelp/helpmanager.cpp.o --- [ 13%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/onlinehelp/helpmanager.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/onlinehelp/helpmanager.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/onlinehelp/helpmanager.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/onlinehelp/helptopic.cpp.o --- [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/onlinehelp/helptopic.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/onlinehelp/helptopic.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/onlinehelp/helptopic.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/onlinehelp/helpwritercontext.cpp.o --- [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/onlinehelp/helpwritercontext.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/onlinehelp/helpwritercontext.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/onlinehelp/helpwritercontext.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/options/abstractoption.cpp.o --- [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/options/abstractoption.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC 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CMakeFiles/libgromacs.dir/options/basicoptions.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/options/basicoptions.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/options/filenameoption.cpp.o --- [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/options/filenameoption.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/options/filenameoption.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/options/filenameoption.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/options/options.cpp.o --- [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/options/options.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/options/options.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/options/options.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/options/optionsassigner.cpp.o --- [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/options/optionsassigner.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/options/optionsassigner.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/options/optionsassigner.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/options/optionsvisitor.cpp.o --- [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/options/optionsvisitor.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/options/optionsvisitor.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/options/optionsvisitor.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/options/timeunitmanager.cpp.o --- [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/options/timeunitmanager.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/options/timeunitmanager.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/options/timeunitmanager.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/timing/cyclecounter.c.o --- [ 15%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/timing/cyclecounter.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/timing/cyclecounter.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/timing/cyclecounter.c --- src/gromacs/CMakeFiles/libgromacs.dir/timing/wallcycle.c.o --- [ 15%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/timing/wallcycle.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/timing/wallcycle.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/timing/wallcycle.c --- src/gromacs/CMakeFiles/libgromacs.dir/timing/walltime_accounting.c.o --- [ 15%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/timing/walltime_accounting.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/timing/walltime_accounting.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/timing/walltime_accounting.c --- src/gromacs/CMakeFiles/libgromacs.dir/utility/cstringutil.c.o --- [ 15%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/utility/cstringutil.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/cstringutil.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility/cstringutil.c --- src/gromacs/CMakeFiles/libgromacs.dir/utility/qsort_threadsafe.c.o --- [ 15%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/utility/qsort_threadsafe.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/qsort_threadsafe.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility/qsort_threadsafe.c --- src/gromacs/CMakeFiles/libgromacs.dir/utility/smalloc.c.o --- [ 15%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/utility/smalloc.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/smalloc.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility/smalloc.c --- src/gromacs/CMakeFiles/libgromacs.dir/utility/baseversion.cpp.o --- [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/baseversion.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/baseversion.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility/baseversion.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/utility/errorcodes.cpp.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/utility/errorformat.cpp.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/utility/errorcodes.cpp.o --- [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/errorcodes.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include 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-I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/gmxassert.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility/gmxassert.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/utility/gmxomp.cpp.o --- [ 16%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/gmxomp.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include 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/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/gmx_system_xdr.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/fileio/gmx_system_xdr.c --- src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio.c.o --- [ 17%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/gmxfio.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/fileio/gmxfio.c --- src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio_asc.c.o --- [ 19%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio_asc.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/gmxfio_asc.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/fileio/gmxfio_asc.c --- src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio_bin.c.o --- [ 19%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio_bin.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/gmxfio_bin.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/fileio/gmxfio_bin.c --- src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio_rw.c.o --- [ 19%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio_rw.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/gmxfio_rw.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/fileio/gmxfio_rw.c --- src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio_xdr.c.o --- [ 19%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio_xdr.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/gmxfio_xdr.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/fileio/gmxfio_xdr.c --- src/gromacs/CMakeFiles/libgromacs.dir/fileio/libxdrf.c.o --- [ 19%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/fileio/libxdrf.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops 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-Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/mdoutf.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/fileio/mdoutf.c --- src/gromacs/CMakeFiles/libgromacs.dir/fileio/pdbio.c.o --- [ 19%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/fileio/pdbio.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/pdbio.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/fileio/pdbio.c --- src/gromacs/CMakeFiles/libgromacs.dir/fileio/strdb.c.o --- [ 19%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/fileio/strdb.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/strdb.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/fileio/strdb.c --- src/gromacs/CMakeFiles/libgromacs.dir/fileio/timecontrol.c.o --- [ 19%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/fileio/timecontrol.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/timecontrol.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/fileio/timecontrol.c --- src/gromacs/CMakeFiles/libgromacs.dir/fileio/tpxio.c.o --- [ 20%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/fileio/tpxio.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/tpxio.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/fileio/tpxio.c --- src/gromacs/CMakeFiles/libgromacs.dir/fileio/trajectory_writing.c.o --- [ 20%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/fileio/trajectory_writing.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/trajectory_writing.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/fileio/trajectory_writing.c --- src/gromacs/CMakeFiles/libgromacs.dir/fileio/trnio.c.o --- [ 20%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/fileio/trnio.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/trnio.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/fileio/trnio.c --- src/gromacs/CMakeFiles/libgromacs.dir/fileio/trxio.c.o --- [ 20%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/fileio/trxio.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders 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-I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/vmdio.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/fileio/vmdio.c --- src/gromacs/CMakeFiles/libgromacs.dir/fileio/writeps.c.o --- [ 20%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/fileio/writeps.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS 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src/gromacs/CMakeFiles/libgromacs.dir/fileio/xdrd.c.o --- [ 20%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/fileio/xdrd.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/xdrd.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/fileio/xdrd.c --- src/gromacs/CMakeFiles/libgromacs.dir/fileio/xtcio.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/xtcio.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/fileio/xtcio.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/vmd_molfile/vmddlopen.c.o --- [ 20%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/vmd_molfile/vmddlopen.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/vmd_molfile/vmddlopen.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/vmd_molfile/vmddlopen.c --- src/gromacs/CMakeFiles/libgromacs.dir/swap/swapcoords.c.o --- [ 21%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/swap/swapcoords.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/swap/swapcoords.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/swap/swapcoords.c --- src/gromacs/CMakeFiles/libgromacs.dir/essentialdynamics/edsam.c.o --- [ 21%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/essentialdynamics/edsam.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/essentialdynamics/edsam.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/essentialdynamics/edsam.c --- src/gromacs/CMakeFiles/libgromacs.dir/pulling/pull.c.o --- [ 21%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/pulling/pull.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/pulling/pull.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/pulling/pull.c --- src/gromacs/CMakeFiles/libgromacs.dir/pulling/pull_rotation.c.o --- [ 21%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/pulling/pull_rotation.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/pulling/pull_rotation.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/pulling/pull_rotation.c --- src/gromacs/CMakeFiles/libgromacs.dir/pulling/pullutil.c.o --- [ 21%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/pulling/pullutil.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/pulling/pullutil.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/pulling/pullutil.c --- src/gromacs/CMakeFiles/libgromacs.dir/imd/imd.c.o --- [ 21%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/imd/imd.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/imd/imd.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/imd/imd.c --- src/gromacs/CMakeFiles/libgromacs.dir/imd/imdsocket.c.o --- [ 21%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/imd/imdsocket.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/imd/imdsocket.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/imd/imdsocket.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/anadih.c.o --- [ 21%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/anadih.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/anadih.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/anadih.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/autocorr.c.o --- [ 21%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/autocorr.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/autocorr.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/autocorr.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/binsearch.c.o --- [ 22%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/binsearch.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/binsearch.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/binsearch.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/cmat.c.o --- [ 22%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/cmat.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/cmat.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/cmat.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/correl.c.o --- [ 22%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/correl.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/correl.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/correl.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/dens_filter.c.o --- [ 22%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/dens_filter.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/dens_filter.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/dens_filter.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/dlist.c.o --- [ 22%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/dlist.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/dlist.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/dlist.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/edittop.c.o --- [ 22%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/edittop.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include 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src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_anadock.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_anadock.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_anadock.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_anaeig.c.o --- [ 23%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_anaeig.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_anaeig.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_anaeig.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_analyze.c.o --- [ 23%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_analyze.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_analyze.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_analyze.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_angle.c.o --- [ 23%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_angle.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_angle.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_angle.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_bar.c.o --- [ 23%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_bar.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_bar.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_bar.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_bundle.c.o --- [ 23%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_bundle.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_bundle.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_bundle.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_chi.c.o --- [ 23%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_chi.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_chi.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_chi.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_cluster.c.o --- [ 23%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_cluster.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_cluster.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_cluster.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_clustsize.c.o --- [ 23%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_clustsize.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_clustsize.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_clustsize.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_confrms.c.o --- [ 24%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_confrms.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_confrms.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_confrms.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_covar.c.o --- [ 24%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_covar.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_covar.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_covar.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_current.c.o --- [ 24%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_current.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_current.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_current.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_density.c.o --- [ 24%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_density.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_density.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_density.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_densmap.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_dielectric.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_densmap.c.o --- [ 24%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_densmap.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_dielectric.c.o --- [ 24%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_dielectric.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_densmap.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_densmap.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_densmap.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_dielectric.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_dielectric.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_dielectric.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_disre.c.o --- [ 24%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_disre.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_disre.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_disre.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_do_dssp.c.o --- [ 24%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_do_dssp.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o 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-Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_dos.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_dos.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_dyecoupl.c.o --- [ 24%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_dyecoupl.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer 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-Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_dyndom.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_dyndom.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_editconf.c.o --- [ 25%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_editconf.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 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-I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_eneconv.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_eneconv.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_enemat.c.o --- [ 25%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_enemat.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_enemat.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_enemat.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_energy.c.o --- [ 25%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_energy.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_energy.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_energy.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_filter.c.o --- [ 25%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_filter.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include 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-I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_genion.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_genion.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_genpr.c.o --- [ 25%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_genpr.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_genpr.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_genpr.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_gyrate.c.o --- [ 25%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_gyrate.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_gyrate.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_gyrate.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_h2order.c.o --- [ 26%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_h2order.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_h2order.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_h2order.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_hbond.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_helix.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_hbond.c.o --- [ 26%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_hbond.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_hbond.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_hbond.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_helix.c.o --- [ 26%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_helix.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_helix.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_helix.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_helixorient.c.o --- [ 26%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_helixorient.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_helixorient.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_helixorient.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_hydorder.c.o --- [ 26%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_hydorder.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_hydorder.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_hydorder.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_lie.c.o --- [ 26%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_lie.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_lie.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_lie.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_make_edi.c.o --- [ 26%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_make_edi.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_make_edi.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_make_edi.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_make_ndx.c.o --- [ 26%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_make_ndx.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_make_ndx.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_make_ndx.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_mdmat.c.o --- [ 26%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_mdmat.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_mdmat.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_mdmat.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_mindist.c.o --- [ 28%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_mindist.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_mindist.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_mindist.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_mk_angndx.c.o --- [ 28%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_mk_angndx.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_mk_angndx.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_mk_angndx.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_morph.c.o --- [ 28%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_morph.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_morph.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_morph.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_msd.c.o --- [ 28%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_msd.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include 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-I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_nmeig.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_nmeig.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_nmens.c.o --- [ 28%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_nmens.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_nmens.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_nmens.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_nmtraj.c.o --- [ 28%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_nmtraj.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_nmtraj.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_nmtraj.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_options.c.o --- [ 28%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_options.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_options.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_options.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_order.c.o --- [ 28%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_order.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_order.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_order.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_polystat.c.o --- [ 28%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_polystat.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_polystat.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_polystat.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_potential.c.o --- [ 29%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_potential.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_potential.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_potential.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_principal.c.o --- [ 29%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_principal.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_principal.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_principal.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_rama.c.o --- [ 29%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_rama.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_rama.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_rama.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_rdf.c.o --- [ 29%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_rdf.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_rdf.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_rdf.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_rms.c.o --- [ 29%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_rms.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_rms.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_rms.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_rmsdist.c.o --- [ 29%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_rmsdist.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_rmsdist.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_rmsdist.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_rmsf.c.o --- [ 29%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_rmsf.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_rmsf.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_rmsf.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_rotacf.c.o --- [ 29%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_rotacf.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_rotacf.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_rotacf.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_rotmat.c.o --- [ 29%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_rotmat.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_rotmat.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_rotmat.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_saltbr.c.o --- [ 30%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_saltbr.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_saltbr.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_saltbr.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_sans.c.o --- [ 30%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_sans.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_sans.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_sans.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_saxs.c.o --- [ 30%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_saxs.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include 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-DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_sigeps.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_sigeps.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_sorient.c.o --- [ 30%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_sorient.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_sorient.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_sorient.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_spatial.c.o --- [ 30%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_spatial.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_spatial.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_spatial.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_spol.c.o --- [ 30%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_spol.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_spol.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_spol.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_tcaf.c.o --- [ 30%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_tcaf.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_tcaf.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_tcaf.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_traj.c.o --- [ 30%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_traj.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_traj.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_traj.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_trjcat.c.o --- [ 31%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_trjcat.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_trjcat.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_trjcat.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_trjconv.c.o --- [ 31%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_trjconv.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_trjconv.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_trjconv.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_trjorder.c.o --- [ 31%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_trjorder.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_trjorder.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_trjorder.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_tune_pme.c.o --- [ 31%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_tune_pme.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_tune_pme.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_tune_pme.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_vanhove.c.o --- [ 31%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_vanhove.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_vanhove.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_vanhove.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_velacc.c.o --- [ 31%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_velacc.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_velacc.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_velacc.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_wheel.c.o --- [ 31%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_wheel.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_wheel.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_wheel.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_xpm2ps.c.o --- [ 31%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_xpm2ps.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_xpm2ps.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_xpm2ps.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/hxprops.c.o --- [ 31%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/hxprops.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/hxprops.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/hxprops.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/levenmar.c.o --- [ 32%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/levenmar.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/levenmar.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/levenmar.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/nrama.c.o --- [ 32%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/nrama.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/nrama.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/nrama.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/nsfactor.c.o --- [ 32%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/nsfactor.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/nsfactor.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/nsfactor.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/polynomials.c.o --- [ 32%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/polynomials.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/polynomials.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/polynomials.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/powerspect.c.o --- [ 32%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/powerspect.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/powerspect.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/powerspect.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/pp2shift.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_densorder.cpp.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/pp2shift.c.o --- [ 32%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/pp2shift.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/pp2shift.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/pp2shift.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_densorder.cpp.o --- [ 32%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_densorder.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_densorder.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_densorder.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_dipoles.cpp.o --- [ 32%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_dipoles.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_dipoles.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_dipoles.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_pme_error.cpp.o --- [ 32%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_pme_error.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_pme_error.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_pme_error.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_wham.cpp.o --- [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_wham.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_wham.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxana/gmx_wham.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/statistics/statistics.c.o --- [ 33%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/statistics/statistics.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops 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-I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/analysisdata/dataproxy.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/analysisdata/dataproxy.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/analysisdata/datastorage.cpp.o --- [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/analysisdata/datastorage.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/analysisdata/datastorage.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/analysisdata/datastorage.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/analysisdata/modules/average.cpp.o --- [ 34%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/analysisdata/modules/average.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src 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-I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/analysisdata/modules/displacement.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/analysisdata/modules/displacement.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/analysisdata/modules/frameaverager.cpp.o --- [ 34%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/analysisdata/modules/frameaverager.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders 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-DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/selection.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/selection/selection.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/selection/selectioncollection.cpp.o --- [ 37%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/selection/selectioncollection.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/selectioncollection.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/selection/selectioncollection.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/selection/selectionoption.cpp.o --- [ 37%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/selection/selectionoption.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && 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/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/selectionoptionmanager.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/selection/selectionoptionmanager.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/selection/selelem.cpp.o --- [ 37%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/selection/selelem.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/selelem.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/selection/selelem.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/selection/selhelp.cpp.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/selection/selmethod.cpp.o --- [ 37%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/selection/selmethod.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/selmethod.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/selection/selmethod.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/selection/selhelp.cpp.o --- [ 37%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/selection/selhelp.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/selhelp.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/selection/selhelp.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/selection/selvalue.cpp.o --- [ 37%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/selection/selvalue.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/selvalue.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/selection/selvalue.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_compare.cpp.o --- [ 37%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_compare.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/sm_compare.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/selection/sm_compare.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_distance.cpp.o --- [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_distance.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/sm_distance.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/selection/sm_distance.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_insolidangle.cpp.o --- [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_insolidangle.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/sm_insolidangle.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/selection/sm_insolidangle.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_keywords.cpp.o --- [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_keywords.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/sm_keywords.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/selection/sm_keywords.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_merge.cpp.o --- [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_merge.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/sm_merge.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/selection/sm_merge.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_permute.cpp.o --- [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_permute.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/sm_permute.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/selection/sm_permute.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_position.cpp.o --- [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_position.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/sm_position.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/selection/sm_position.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_same.cpp.o --- [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_same.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/sm_same.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/selection/sm_same.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_simple.cpp.o --- [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_simple.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/sm_simple.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/selection/sm_simple.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/selection/symrec.cpp.o --- [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/selection/symrec.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/symrec.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/selection/symrec.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/trajectoryanalysis/analysismodule.cpp.o --- [ 39%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/trajectoryanalysis/analysismodule.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/trajectoryanalysis/analysismodule.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/trajectoryanalysis/analysismodule.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/trajectoryanalysis/analysissettings.cpp.o --- [ 39%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/trajectoryanalysis/analysissettings.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/trajectoryanalysis/analysissettings.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/trajectoryanalysis/analysissettings.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/trajectoryanalysis/cmdlinerunner.cpp.o --- [ 39%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/trajectoryanalysis/cmdlinerunner.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/trajectoryanalysis/cmdlinerunner.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/trajectoryanalysis/cmdlinerunner.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/trajectoryanalysis/modules.cpp.o --- [ 39%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/trajectoryanalysis/modules.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast 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-Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/bondfree.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/bondfree.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/calcgrid.c.o --- [ 40%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/calcgrid.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/calcgrid.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/calcgrid.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/calch.c.o --- [ 40%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/calch.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/calch.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/calch.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/chargegroup.c.o --- [ 41%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/chargegroup.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/chargegroup.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/chargegroup.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/checkpoint.c.o --- [ 41%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/checkpoint.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/checkpoint.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/checkpoint.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/cinvsqrtdata.c.o --- [ 41%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/cinvsqrtdata.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/cinvsqrtdata.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/cinvsqrtdata.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/conformation-utilities.c.o --- [ 41%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/conformation-utilities.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders 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src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/gmx_detect_hardware.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/gmx_cpuid.c.o --- [ 41%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/gmx_cpuid.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/gmx_detect_hardware.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/gmx_detect_hardware.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/gmx_detect_hardware.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/gmx_cpuid.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/gmx_cpuid.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/gmx_cpuid.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/gmx_fatal.c.o --- [ 41%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/gmx_fatal.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer 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-fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/gmx_omp_nthreads.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/gmx_omp_nthreads.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/gmx_thread_affinity.c.o --- [ 42%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/gmx_thread_affinity.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/ifunc.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/gmx_thread_affinity.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/gmx_thread_affinity.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/gmx_thread_affinity.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/ifunc.c.o --- [ 42%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/ifunc.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/ifunc.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/ifunc.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/index.c.o --- [ 42%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/index.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/index.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/index.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/inputrec.c.o --- [ 42%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/inputrec.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders 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-Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/rbin.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/rbin.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/readinp.c.o --- [ 43%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/readinp.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/readinp.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/readinp.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/restcbt.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/rmpbc.c.o --- [ 43%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/rmpbc.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/rmpbc.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/rmpbc.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/restcbt.c.o --- [ 44%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/restcbt.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/restcbt.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/restcbt.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/sfactor.c.o --- [ 44%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/sfactor.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/sfactor.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/sfactor.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/sighandler.c.o --- [ 44%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/sighandler.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/sighandler.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/sighandler.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/splitter.c.o --- [ 44%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/splitter.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/splitter.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/splitter.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/symtab.c.o --- [ 44%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/symtab.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/symtab.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/symtab.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/topsort.c.o --- [ 44%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/topsort.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/topsort.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/topsort.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/txtdump.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/typedefs.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/txtdump.c.o --- [ 44%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/txtdump.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/txtdump.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/txtdump.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/typedefs.c.o --- [ 44%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/typedefs.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/typedefs.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/typedefs.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/viewit.c.o --- [ 44%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/viewit.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/viewit.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/viewit.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/warninp.c.o --- [ 46%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/warninp.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/warninp.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/warninp.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/copyrite.cpp.o --- [ 46%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/copyrite.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/copyrite.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/copyrite.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/main.cpp.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/oenv.cpp.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/main.cpp.o --- [ 46%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/main.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/main.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/main.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/oenv.cpp.o --- [ 46%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/oenv.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/oenv.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/oenv.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/xvgr.cpp.o --- [ 46%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/xvgr.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/xvgr.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/xvgr.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_free_energy.c.o --- [ 46%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_free_energy.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_free_energy.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_free_energy.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_generic.c.o --- [ 46%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_generic.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS 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Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_generic_cg.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_generic_cg.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_generic_cg.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel.c.o --- [ 47%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nonbonded.c.o --- [ 47%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nonbonded.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nonbonded.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nonbonded.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomP1P1_c.c.o --- [ 47%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW3P1_c.c.o --- [ 47%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW3W3_c.c.o --- [ 47%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW4P1_c.c.o --- [ 47%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW4W4_c.c.o --- [ 47%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomP1P1_c.c.o --- [ 47%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3P1_c.c.o --- [ 47%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3W3_c.c.o --- [ 47%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4P1_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4W4_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4P1_c.c.o --- [ 48%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4W4_c.c.o --- [ 48%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomP1P1_c.c.o --- [ 48%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3P1_c.c.o --- [ 48%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3W3_c.c.o --- [ 48%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4P1_c.c.o --- [ 48%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4W4_c.c.o --- [ 48%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomP1P1_c.c.o --- [ 48%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3P1_c.c.o --- [ 48%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3W3_c.c.o --- [ 49%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW4P1_c.c.o --- [ 49%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW4W4_c.c.o --- [ 49%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomP1P1_c.c.o --- [ 49%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW3P1_c.c.o --- [ 49%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW3W3_c.c.o --- [ 49%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW4P1_c.c.o --- [ 49%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW4W4_c.c.o --- [ 49%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomP1P1_c.c.o --- [ 49%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3P1_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3W3_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3P1_c.c.o --- [ 50%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4P1_c.c.o --- [ 50%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4W4_c.c.o --- [ 50%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3W3_c.c.o --- [ 50%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3W3_c.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomP1P1_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3W3_c.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomP1P1_c.c.o --- [ 50%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3P1_c.c.o --- [ 50%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3W3_c.c.o --- [ 50%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW4P1_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW4W4_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW4P1_c.c.o --- [ 50%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW4W4_c.c.o --- [ 50%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomP1P1_c.c.o --- [ 50%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW3P1_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW3W3_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW3P1_c.c.o --- [ 51%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW3W3_c.c.o --- [ 51%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4P1_c.c.o --- [ 51%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4W4_c.c.o --- [ 51%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomP1P1_c.c.o --- [ 51%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW3P1_c.c.o --- [ 51%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW3W3_c.c.o --- [ 51%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW4P1_c.c.o --- [ 51%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW4W4_c.c.o --- [ 51%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomP1P1_c.c.o --- [ 52%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3P1_c.c.o --- [ 52%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3W3_c.c.o --- [ 52%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4P1_c.c.o --- [ 52%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4W4_c.c.o --- [ 52%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomP1P1_c.c.o --- [ 52%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3P1_c.c.o --- [ 52%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3W3_c.c.o --- [ 52%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4P1_c.c.o --- [ 52%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4W4_c.c.o --- [ 52%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomP1P1_c.c.o --- [ 53%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3P1_c.c.o --- [ 53%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3W3_c.c.o --- [ 53%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4P1_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4W4_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4P1_c.c.o --- [ 53%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4W4_c.c.o --- [ 53%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomP1P1_c.c.o --- [ 53%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3P1_c.c.o --- [ 53%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3W3_c.c.o --- [ 53%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4P1_c.c.o --- [ 53%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4W4_c.c.o --- [ 55%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomP1P1_c.c.o --- [ 55%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW3P1_c.c.o --- [ 55%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW3W3_c.c.o --- [ 55%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW4P1_c.c.o --- [ 55%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW4W4_c.c.o --- [ 55%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW4W4_c.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomP1P1_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW4W4_c.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomP1P1_c.c.o --- [ 55%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW3P1_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW3W3_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW3P1_c.c.o --- [ 55%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW3W3_c.c.o --- [ 55%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW4P1_c.c.o --- [ 56%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW4W4_c.c.o --- [ 56%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomP1P1_c.c.o --- [ 56%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW3P1_c.c.o --- [ 56%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW3W3_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW4P1_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW3W3_c.c.o --- [ 56%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW4P1_c.c.o --- [ 56%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW4W4_c.c.o --- [ 56%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomP1P1_c.c.o --- [ 56%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW3P1_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW3W3_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW3P1_c.c.o --- [ 56%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW3W3_c.c.o --- [ 56%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW4P1_c.c.o --- [ 57%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW4W4_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomP1P1_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW4W4_c.c.o --- [ 57%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomP1P1_c.c.o --- [ 57%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW3P1_c.c.o --- [ 57%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW3W3_c.c.o --- [ 57%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW4P1_c.c.o --- [ 57%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW4W4_c.c.o --- [ 57%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomP1P1_c.c.o --- [ 57%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW3P1_c.c.o --- [ 57%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW3W3_c.c.o --- [ 58%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW4P1_c.c.o --- [ 58%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW4W4_c.c.o --- [ 58%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomP1P1_c.c.o --- [ 58%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW3P1_c.c.o --- [ 58%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW3W3_c.c.o --- [ 58%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW4P1_c.c.o --- [ 58%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW4W4_c.c.o --- [ 58%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwBham_GeomP1P1_c.c.o --- [ 58%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwBham_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwBham_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwBham_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwCSTab_GeomP1P1_c.c.o --- [ 58%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwCSTab_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwCSTab_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwCSTab_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwLJ_GeomP1P1_c.c.o --- [ 59%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwLJ_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwLJ_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwLJ_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwNone_GeomP1P1_c.c.o --- [ 59%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwNone_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwNone_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwNone_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBhamSh_GeomP1P1_c.c.o --- [ 59%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBhamSh_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBhamSh_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBhamSh_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBhamSw_GeomP1P1_c.c.o --- [ 59%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBhamSw_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBhamSw_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBhamSw_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBham_GeomP1P1_c.c.o --- [ 59%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBham_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBham_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBham_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwCSTab_GeomP1P1_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJEwSh_GeomP1P1_c.c.o --- [ 59%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJEwSh_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJEwSh_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJEwSh_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwCSTab_GeomP1P1_c.c.o --- [ 59%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwCSTab_GeomP1P1_c.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJEw_GeomP1P1_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwCSTab_GeomP1P1_c.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwCSTab_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwCSTab_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJEw_GeomP1P1_c.c.o --- [ 59%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJEw_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJEw_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJEw_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJSh_GeomP1P1_c.c.o --- [ 59%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJSh_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJSh_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJSh_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJSw_GeomP1P1_c.c.o --- [ 60%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJSw_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJSw_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJSw_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJ_GeomP1P1_c.c.o --- [ 60%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJ_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJ_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJ_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomP1P1_c.c.o --- [ 60%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW3P1_c.c.o --- [ 60%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW3W3_c.c.o --- [ 60%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4P1_c.c.o --- [ 60%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4W4_c.c.o --- [ 60%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomP1P1_c.c.o --- [ 60%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3P1_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3W3_c.c.o --- [ 61%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3P1_c.c.o --- [ 61%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4P1_c.c.o --- [ 61%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4W4_c.c.o --- [ 61%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomP1P1_c.c.o --- [ 61%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3P1_c.c.o --- [ 61%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3W3_c.c.o --- [ 61%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4P1_c.c.o --- [ 61%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4W4_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomP1P1_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4W4_c.c.o --- [ 61%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomP1P1_c.c.o --- [ 61%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3P1_c.c.o --- [ 61%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3W3_c.c.o --- [ 62%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW4P1_c.c.o --- [ 62%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW4W4_c.c.o --- [ 62%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomP1P1_c.c.o --- [ 62%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomP1P1_c.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW3P1_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomP1P1_c.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW3P1_c.c.o --- [ 62%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW3W3_c.c.o --- [ 62%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4P1_c.c.o --- [ 62%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4W4_c.c.o --- [ 62%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomP1P1_c.c.o --- [ 62%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3P1_c.c.o --- [ 64%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3W3_c.c.o --- [ 64%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4P1_c.c.o --- [ 64%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4W4_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomP1P1_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW3P1_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4W4_c.c.o --- [ 64%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW3P1_c.c.o --- [ 64%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW3P1_c.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomP1P1_c.c.o --- [ 64%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomP1P1_c.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW3P1_c.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomP1P1_c.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW3W3_c.c.o --- [ 64%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4P1_c.c.o --- [ 64%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4W4_c.c.o --- [ 64%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomP1P1_c.c.o --- [ 64%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3P1_c.c.o --- [ 65%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3W3_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4P1_c.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3W3_c.c.o --- [ 65%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4P1_c.c.o --- [ 65%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4W4_c.c.o --- [ 65%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomP1P1_c.c.o --- [ 65%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW3P1_c.c.o --- [ 65%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW3W3_c.c.o --- [ 65%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW4P1_c.c.o --- [ 65%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW4W4_c.c.o --- [ 65%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomP1P1_c.c.o --- [ 66%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomP1P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomP1P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomP1P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3P1_c.c.o --- [ 66%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3W3_c.c.o --- [ 66%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3W3_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3W3_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3W3_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4P1_c.c.o --- [ 66%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4P1_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4P1_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4P1_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4W4_c.c.o --- [ 66%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4W4_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4W4_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4W4_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsall.c.o --- [ 66%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsall.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsall.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsall.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsallgb.c.o --- [ 66%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsallgb.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsallgb.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsallgb.c --- src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_c.c.o --- [ 66%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_c.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_c.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_c.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_4xn.c.o --- [ 66%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_4xn.c.o --- [ 67%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_4xn.c.o --- [ 67%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_4xn.c.o --- [ 67%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_4xn.c.o --- [ 67%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_4xn.c.o --- [ 67%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_4xn.c.o --- [ 67%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_4xn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_4xn.c.o --- [ 67%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_4xn.c.o --- [ 67%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_4xn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_4xn.c.o --- [ 67%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_4xn.c.o --- [ 68%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_4xn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_4xn.c.o --- [ 68%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_4xn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_4xn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_4xn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_4xn.c.o --- [ 68%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_4xn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_4xn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_4xn.c.o --- [ 68%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_4xn.c.o --- [ 68%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_4xn.c.o --- [ 68%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_4xn.c.o --- [ 68%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_4xn.c.o --- [ 68%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_4xn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_4xn.c.o --- [ 68%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_4xn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_4xn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_4xn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_4xn.c.o --- [ 68%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_4xn.c.o --- [ 69%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_4xn.c.o --- [ 69%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_4xn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_4xn.c.o --- [ 69%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_4xn.c.o --- [ 69%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_4xn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_4xn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_4xn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_4xn.c.o --- [ 69%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_4xn.c.o --- [ 69%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_4xn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_4xn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_4xn.c.o --- [ 69%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_F_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_F_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_F_4xn.c.o --- [ 69%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_F_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_4xn.c.o --- [ 69%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_F_4xn.c.o --- [ 70%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_F_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_4xn.c.o --- [ 70%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_4xn.c.o --- [ 70%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_F_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_4xn.c.o --- [ 70%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_4xn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_F_4xn.c.o --- [ 70%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_F_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VF_4xn.c.o --- [ 70%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VF_4xn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_4xn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VF_4xn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_4xn.c.o --- [ 70%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_4xn.c.o --- [ 70%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_4xn.c.o --- [ 70%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_4xn.c.o --- [ 70%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_4xn.c.o --- [ 71%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_4xn.c.o --- [ 71%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_4xn.c.o --- [ 71%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_4xn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_4xn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_4xn.c.o --- [ 71%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_4xn.c.o --- [ 71%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_4xn.c.o --- [ 71%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_4xn.c.o --- [ 71%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_4xn.c.o --- [ 71%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_4xn.c.o --- [ 71%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_4xn.c.o --- [ 73%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_4xn.c.o --- [ 73%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_4xn.c.o --- [ 73%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_4xn.c.o --- [ 73%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_4xn.c.o --- [ 73%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_4xn.c.o --- [ 73%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_4xn.c.o --- [ 73%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_4xn.c.o --- [ 73%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_4xn.c.o --- [ 73%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_4xn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_4xn.c.o --- [ 73%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_4xn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_4xn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_4xn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_4xn.c.o --- [ 74%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_4xn.c.o --- [ 74%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_4xn.c.o --- [ 74%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_4xn.c.o --- [ 74%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_4xn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_4xn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_4xn.c.o --- [ 74%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_4xn.c.o --- [ 74%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_4xn.c.o --- [ 74%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_4xn.c.o --- [ 74%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_4xn.c.o --- [ 74%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_4xn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_4xn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_4xn.c.o --- [ 75%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_4xn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_4xn.c.o --- [ 75%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_4xn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_F_4xn.c.o --- [ 75%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_F_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_4xn.c.o --- [ 75%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_4xn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_4xn.c.o --- [ 75%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_4xn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_4xn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_4xn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_4xn.c.o --- [ 75%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_4xn.c.o --- [ 75%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_4xn.c.o --- [ 75%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_4xn.c.o --- [ 75%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_4xn.c.o --- [ 75%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_4xn.c.o --- [ 76%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_4xn.c.o --- [ 76%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_F_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_4xn.c.o --- [ 76%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_4xn.c.o --- [ 76%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_F_4xn.c.o --- [ 76%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_F_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_4xn.c.o --- [ 76%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_F_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_4xn.c.o --- [ 76%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_F_4xn.c.o --- [ 76%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_F_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_4xn.c.o --- [ 77%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_4xn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_4xn.c.o --- [ 77%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_4xn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_4xn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_4xn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_F_4xn.c.o --- [ 77%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_F_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_F_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_F_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VF_4xn.c.o --- [ 77%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_4xn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_simd_4xn.c.o --- [ 77%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_simd_4xn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_simd_4xn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_simd_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_simd_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_2xnn.c.o --- [ 77%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_4xn.c.o --- [ 77%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_4xn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_4xn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_4xn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_2xnn.c.o --- [ 77%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_2xnn.c.o --- [ 77%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_2xnn.c.o --- [ 77%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_2xnn.c.o --- [ 77%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_2xnn.c.o --- [ 78%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_2xnn.c.o --- [ 78%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_2xnn.c.o --- [ 78%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.c.o --- [ 78%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_2xnn.c.o --- [ 78%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_2xnn.c.o --- [ 78%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_2xnn.c.o --- [ 78%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_2xnn.c.o --- [ 78%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_2xnn.c.o --- [ 78%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_2xnn.c.o --- [ 79%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_2xnn.c.o --- [ 79%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_2xnn.c.o --- [ 79%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_2xnn.c.o --- [ 79%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_2xnn.c.o --- [ 79%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_2xnn.c.o --- [ 79%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_2xnn.c.o --- [ 79%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_2xnn.c.o --- [ 79%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_2xnn.c.o --- [ 79%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_2xnn.c.o --- [ 80%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_2xnn.c.o --- [ 80%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_2xnn.c.o --- [ 80%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_2xnn.c.o --- [ 80%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_F_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_F_2xnn.c.o --- [ 80%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_F_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_F_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_F_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_2xnn.c.o --- [ 80%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_2xnn.c.o --- [ 80%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_F_2xnn.c.o --- [ 80%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_F_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_2xnn.c.o --- [ 80%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_F_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_2xnn.c.o --- [ 80%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_F_2xnn.c.o --- [ 82%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_F_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_2xnn.c.o --- [ 82%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VF_2xnn.c.o --- [ 82%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VF_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VF_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_2xnn.c.o --- [ 82%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_2xnn.c.o --- [ 82%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_2xnn.c.o --- [ 82%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_2xnn.c.o --- [ 82%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_2xnn.c.o --- [ 82%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_2xnn.c.o --- [ 82%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_2xnn.c.o --- [ 83%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.c.o --- [ 83%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_2xnn.c.o --- [ 83%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_2xnn.c.o --- [ 83%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_2xnn.c.o --- [ 83%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_2xnn.c.o --- [ 83%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_2xnn.c.o --- [ 83%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_2xnn.c.o --- [ 83%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_2xnn.c.o --- [ 83%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_2xnn.c.o --- [ 84%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_2xnn.c.o --- [ 84%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_2xnn.c.o --- [ 84%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_2xnn.c.o --- [ 84%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_2xnn.c.o --- [ 84%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_2xnn.c.o --- [ 84%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_2xnn.c.o --- [ 84%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_2xnn.c.o --- [ 84%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_2xnn.c.o --- [ 84%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_2xnn.c.o --- [ 84%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_2xnn.c.o --- [ 85%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_2xnn.c.o --- [ 85%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_2xnn.c.o --- [ 85%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_2xnn.c.o --- [ 85%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_2xnn.c.o --- [ 85%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_2xnn.c.o --- [ 85%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_2xnn.c.o --- [ 85%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_2xnn.c.o --- [ 85%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_F_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_2xnn.c.o --- [ 86%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_F_2xnn.c.o --- [ 86%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_F_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_2xnn.c.o --- [ 86%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_2xnn.c.o --- [ 86%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_F_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_2xnn.c.o --- [ 86%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_2xnn.c.o --- [ 86%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_2xnn.c.o --- [ 86%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_2xnn.c.o --- [ 86%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_2xnn.c.o --- [ 86%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_2xnn.c.o --- [ 86%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_2xnn.c.o --- [ 86%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_F_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_2xnn.c.o --- [ 87%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_F_2xnn.c.o --- [ 87%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_F_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_2xnn.c.o --- [ 87%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_F_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_2xnn.c.o --- [ 87%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_F_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_F_2xnn.c.o --- [ 87%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_F_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_2xnn.c.o --- [ 87%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_2xnn.c.o --- [ 87%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_F_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VF_2xnn.c.o --- [ 87%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_2xnn.c.o --- [ 88%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_F_2xnn.c.o --- [ 88%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_F_2xnn.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_simd_2xnn.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_F_2xnn.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_F_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_F_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_common.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_gpu_ref.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_common.c.o --- [ 88%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_common.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_simd_2xnn.c.o --- [ 88%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_simd_2xnn.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_simd_2xnn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_simd_2xnn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_common.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_common.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_common.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_gpu_ref.c.o --- [ 88%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_gpu_ref.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_gpu_ref.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_gpu_ref.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_ref.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/adress.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_ref.c.o --- [ 88%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_ref.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_ref.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_ref.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/adress.c.o --- [ 88%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/adress.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/adress.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/adress.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/calcmu.c.o --- [ 88%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/calcmu.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/calcmu.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/calcmu.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/calcvir.c.o --- [ 88%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/calcvir.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/calcvir.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/calcvir.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/clincs.c.o --- [ 88%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/clincs.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include 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-I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/constr.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/constr.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/coupling.c.o --- [ 89%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/coupling.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/coupling.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/coupling.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/csettle.c.o --- [ 89%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/csettle.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/csettle.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/csettle.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/domdec.c.o --- [ 89%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/domdec.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/domdec.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/domdec.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/domdec_box.c.o --- [ 89%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/domdec_box.c.o cd 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src/gromacs/CMakeFiles/libgromacs.dir/mdlib/domdec_con.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/domdec_con.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/domdec_con.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/domdec_network.c.o --- [ 89%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/domdec_network.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/domdec_network.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/domdec_network.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/domdec_setup.c.o --- [ 89%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/domdec_setup.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/domdec_setup.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/domdec_setup.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/domdec_top.c.o --- [ 89%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/domdec_top.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/domdec_top.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/domdec_top.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/ebin.c.o --- [ 89%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/ebin.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/ebin.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/ebin.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/ewald.c.o --- [ 91%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/ewald.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast 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-fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/genborn.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/genborn.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/genborn_allvsall.c.o --- [ 91%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/genborn_allvsall.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/genborn_allvsall.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/genborn_allvsall.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/genborn_allvsall_sse2_double.c.o --- [ 91%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/genborn_allvsall_sse2_double.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra 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-I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/genborn_allvsall_sse2_single.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/genborn_allvsall_sse2_single.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/genborn_sse2_double.c.o --- [ 91%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/genborn_sse2_double.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders 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&& /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/iteratedconstraints.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/iteratedconstraints.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/md_support.c.o --- [ 92%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/md_support.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/md_support.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/md_support.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/mdatom.c.o --- [ 92%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/mdatom.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/mdatom.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/mdatom.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/mdebin.c.o --- [ 92%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/mdebin.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/mdebin.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/mdebin.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/mdebin_bar.c.o --- [ 92%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/mdebin_bar.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/mdebin_bar.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/mdebin_bar.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/minimize.c.o --- [ 92%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/minimize.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/minimize.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/minimize.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_atomdata.c.o --- [ 92%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_atomdata.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_atomdata.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_atomdata.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_search.c.o --- [ 93%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nbnxn_search.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_search.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nbnxn_search.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nlistheuristics.c.o --- [ 93%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nlistheuristics.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nlistheuristics.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nlistheuristics.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/ns.c.o --- [ 93%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/ns.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/ns.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/ns.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nsgrid.c.o --- [ 93%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/nsgrid.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nsgrid.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/nsgrid.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/perf_est.c.o --- [ 93%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/perf_est.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/perf_est.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/perf_est.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/pme.c.o --- [ 93%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/pme.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/pme.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/pme.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/pme_pp.c.o --- [ 93%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/pme_pp.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/pme_pp.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/pme_pp.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/qm_gamess.c.o --- [ 93%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/qm_gamess.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/qm_gamess.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/qm_gamess.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/qm_gaussian.c.o --- [ 93%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/qm_gaussian.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/qm_gaussian.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/qm_gaussian.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/qm_mopac.c.o --- [ 94%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/qm_mopac.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/qm_mopac.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/qm_mopac.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/qm_orca.c.o --- [ 94%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/qm_orca.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/qm_orca.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/qm_orca.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/qmmm.c.o --- [ 94%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/qmmm.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/qmmm.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/qmmm.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/rf_util.c.o --- [ 94%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/rf_util.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/rf_util.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/rf_util.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/shakef.c.o --- [ 94%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/shakef.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/shakef.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/shakef.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/shellfc.c.o --- [ 94%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/shellfc.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/shellfc.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/shellfc.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/sim_util.c.o --- [ 94%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/sim_util.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/sim_util.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/sim_util.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/stat.c.o --- [ 94%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/stat.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include 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-DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/tpi.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/tpi.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/update.c.o --- [ 95%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/update.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/update.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/update.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/vcm.c.o --- [ 95%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/vcm.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/vcm.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/vcm.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/vsite.c.o --- [ 95%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/vsite.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/vsite.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/vsite.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/wall.c.o --- [ 95%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/wall.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/wall.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/wall.c --- src/gromacs/CMakeFiles/libgromacs.dir/mdlib/wnblist.c.o --- [ 95%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/wnblist.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/wnblist.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/mdlib/wnblist.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/errhandler.c.o --- [ 95%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/errhandler.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/errhandler.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/src/errhandler.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/tmpi_malloc.c.o --- [ 95%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/tmpi_malloc.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/tmpi_malloc.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/src/tmpi_malloc.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/atomic.c.o --- [ 95%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/atomic.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/atomic.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/src/atomic.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/lock.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/pthreads.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/lock.c.o --- [ 96%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/lock.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/lock.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/src/lock.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/pthreads.c.o --- [ 96%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/pthreads.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/pthreads.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/src/pthreads.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/system_error.cpp.o --- [ 96%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/system_error.cpp.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/c++ -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wextra -Wno-missing-field-initializers -Wpointer-arith -Wall -Wno-unused-function -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/system_error.cpp.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/src/system_error.cpp --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/alltoall.c.o --- [ 96%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/alltoall.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/alltoall.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/src/alltoall.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/p2p_protocol.c.o --- [ 96%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/p2p_protocol.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/p2p_protocol.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/src/p2p_protocol.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/barrier.c.o --- [ 96%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/barrier.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/barrier.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/src/barrier.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/p2p_send_recv.c.o --- [ 96%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/p2p_send_recv.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/p2p_send_recv.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/src/p2p_send_recv.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/bcast.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/p2p_wait.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/bcast.c.o --- [ 96%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/bcast.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/bcast.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/src/bcast.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/p2p_wait.c.o --- [ 96%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/p2p_wait.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/p2p_wait.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/src/p2p_wait.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/collective.c.o --- [ 97%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/collective.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/collective.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/src/collective.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/profile.c.o --- [ 97%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/profile.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/profile.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/src/profile.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/comm.c.o --- [ 97%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/comm.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/comm.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/src/comm.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/reduce.c.o --- [ 97%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/reduce.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/reduce.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/src/reduce.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/event.c.o --- [ 97%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/event.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/event.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/src/event.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/reduce_fast.c.o --- [ 97%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/reduce_fast.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/reduce_fast.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/src/reduce_fast.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/gather.c.o --- [ 97%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/gather.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/gather.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/src/gather.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/scatter.c.o --- [ 97%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/scatter.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/scatter.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/src/scatter.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/group.c.o --- [ 97%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/group.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/group.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/src/group.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/tmpi_init.c.o --- [ 97%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/tmpi_init.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS 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object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/list.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/list.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/src/list.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/type.c.o --- [ 98%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/type.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/type.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/src/type.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/scan.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/numa_malloc.c.o --- --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/scan.c.o --- [ 98%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/scan.c.o --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/numa_malloc.c.o --- [ 98%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/numa_malloc.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/numa_malloc.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/src/numa_malloc.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/scan.c.o --- cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/utility -I/wrkdirs/science/gromacs/gromacs-5.0.6/src -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/include -I/usr/local/include -pipe -O2 -fno-strict-aliasing -Wno-maybe-uninitialized -Wextra -Wno-missing-field-initializers -Wno-sign-compare -Wpointer-arith -Wall -Wno-unused -Wunused-value -Wunused-parameter -pipe -O2 -fno-strict-aliasing -fomit-frame-pointer -funroll-all-loops -fexcess-precision=fast -Wno-array-bounds -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/scan.c.o -c /wrkdirs/science/gromacs/gromacs-5.0.6/src/external/thread_mpi/src/scan.c --- src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/once.c.o --- [ 98%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/once.c.o cd /wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs && /usr/bin/cc -DHAVE_CONFIG_H -Dlibgromacs_EXPORTS -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/external/tng_io/include -I/wrkdirs/science/gromacs/gromacs-5.0.6/src/gromacs/legacyheaders 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Creating symbolic link /wrkdirs/science/gromacs/stage/usr/local/bin/g_spol -- Installing: Creating symbolic link /wrkdirs/science/gromacs/stage/usr/local/bin/g_tcaf -- Installing: Creating symbolic link /wrkdirs/science/gromacs/stage/usr/local/bin/g_traj -- Installing: Creating symbolic link /wrkdirs/science/gromacs/stage/usr/local/bin/g_tune_pme -- Installing: Creating symbolic link /wrkdirs/science/gromacs/stage/usr/local/bin/g_vanhove -- Installing: Creating symbolic link /wrkdirs/science/gromacs/stage/usr/local/bin/g_velacc -- Installing: Creating symbolic link /wrkdirs/science/gromacs/stage/usr/local/bin/g_wham -- Installing: Creating symbolic link /wrkdirs/science/gromacs/stage/usr/local/bin/g_wheel ====> Compressing man pages (compress-man) =========================================================================== =================================================== ===> Building package for gromacs-5.0.6 file sizes/checksums [1000]: .......... done packing files [1000]: .......... done packing directories [0]: . done =========================================================================== => Cleaning up wrkdir ===> Cleaning for gromacs-5.0.6 build of science/gromacs ended at Sun Oct 9 12:21:43 PDT 2016 build time: 00:04:11