=> Building biology/py-biopython build started at Sat Oct 8 16:26:48 PDT 2016 port directory: /usr/ports/biology/py-biopython building for: DragonFly pkgbox64.dragonflybsd.org 4.7-DEVELOPMENT DragonFly v4.7.0.78.g7d868-DEVELOPMENT #7: Mon Aug 1 22:25:32 PDT 2016 root@pkgbox64.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 maintained by: mauricio@arareko.net ident warning: no id keywords in /build/boomdata/data/.m/Release46-default/ref/../01//usr/ports/biology/py-biopython/Makefile Makefile ident: Poudriere version: 3.1-pre Host OSVERSION: 400700 Jail OSVERSION: 400600 ---Begin Environment--- STATUS=1 SAVED_TERM=screen MASTERMNT=/build/boomdata/data/.m/Release46-default/ref PATH=/usr/local/libexec/poudriere:/sbin:/bin:/usr/sbin:/usr/bin:/usr/pkg/bin:/usr/pkg/sbin:/usr/games:/usr/local/sbin:/usr/local/bin:/usr/pkg/xorg/bin:/usr/X11R6/bin:/root/bin:/sbin:/usr/sbin POUDRIERE_BUILD_TYPE=bulk PKGNAME=py27-biopython-1.68 OLDPWD=/root/boom PWD=/build/boomdata/data/.m/Release46-default/ref/.p/pool MASTERNAME=Release46-default TERM=cons25 USER=root HOME=/root POUDRIERE_VERSION=3.1-pre LOCALBASE=/usr/local PACKAGE_BUILDING=yes ---End Environment--- ---Begin OPTIONS List--- ===> The following configuration options are available for py27-biopython-1.68: REPORTLAB=on: PDF support in Bio.Graphics module ===> Use 'make config' to modify these settings ---End OPTIONS List--- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PYTHON="/usr/local/bin/python2.7" XDG_DATA_HOME=/wrkdirs/biology/py-biopython XDG_CONFIG_HOME=/wrkdirs/biology/py-biopython HOME=/wrkdirs/biology/py-biopython TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc50 --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/biology/py-biopython XDG_CONFIG_HOME=/wrkdirs/biology/py-biopython HOME=/wrkdirs/biology/py-biopython TMPDIR="/tmp" NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc50 LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS="" LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 444" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PYTHON_INCLUDEDIR=include/python2.7 PYTHON_LIBDIR=lib/python2.7 PYTHON_PLATFORM=dragonfly4 PYTHON_SITELIBDIR=lib/python2.7/site-packages PYTHON_VER=2.7 PYTHON_VERSION=python2.7 OSREL=4.6 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local PORTDOCS="" PORTEXAMPLES="" LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/biopython" EXAMPLESDIR="share/examples/biopython" DATADIR="share/biopython" WWWDIR="www/biopython" ETCDIR="etc/biopython" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/biopython DOCSDIR=/usr/local/share/doc/biopython EXAMPLESDIR=/usr/local/share/examples/biopython WWWDIR=/usr/local/www/biopython ETCDIR=/usr/local/etc/biopython --End SUB_LIST-- ---Begin make.conf--- NO_BACKUP=yes USE_PACKAGE_DEPENDS=yes PKG_CREATE_VERBOSE=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORT_DBDIR=/options PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles MAKE_JOBS_NUMBER=5 ---End make.conf--- =================================================== =========================================================================== =================================================== ===> py27-biopython-1.68 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.8.7_3.txz Installing pkg-1.8.7_3... Extracting pkg-1.8.7_3: .......... done ===> py27-biopython-1.68 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py27-biopython-1.68 =========================================================================== =================================================== =========================================================================== =================================================== ===> Fetching all distfiles required by py27-biopython-1.68 for building =========================================================================== =================================================== ===> Fetching all distfiles required by py27-biopython-1.68 for building => SHA256 Checksum OK for biopython-1.68.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Fetching all distfiles required by py27-biopython-1.68 for building ===> Extracting for py27-biopython-1.68 => SHA256 Checksum OK for biopython-1.68.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for py27-biopython-1.68 =========================================================================== =================================================== ===> py27-biopython-1.68 depends on file: /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py - not found ===> Installing existing package /packages/All/py27-numpy-1.11.1,1.txz Installing py27-numpy-1.11.1,1... `-- Installing python27-2.7.12... | `-- Installing expat-2.2.0... | `-- Extracting expat-2.2.0: .......... done | `-- Installing readline-6.3.8... | | `-- Installing indexinfo-0.2.5... | | `-- Extracting indexinfo-0.2.5: .... done | | `-- Installing ncurses-6.0_5... | | `-- Extracting ncurses-6.0_5: .......... done | `-- Extracting readline-6.3.8: .......... done | `-- Installing libffi-3.2.1... | `-- Extracting libffi-3.2.1: .......... done | `-- Installing gettext-runtime-0.19.8.1... | `-- Extracting gettext-runtime-0.19.8.1: .......... done `-- Extracting python27-2.7.12: .......... done `-- Installing py27-setuptools27-23.1.0... `-- Extracting py27-setuptools27-23.1.0: .......... done `-- Installing lapack-3.5.0... | `-- Installing blas-3.5.0_3... | | `-- Installing gcc5-5.4.0... | | `-- Installing mpc-1.0.3... | | | `-- Installing gmp-5.1.3_3... | | | `-- Extracting gmp-5.1.3_3: .......... done | | | `-- Installing mpfr-3.1.5... | | | `-- Extracting mpfr-3.1.5: .......... done | | `-- Extracting mpc-1.0.3: ...... done | | `-- Installing binutils-2.27_4,1... | | `-- Extracting binutils-2.27_4,1: .......... done | | `-- Extracting gcc5-5.4.0: .......... done | `-- Extracting blas-3.5.0_3: ....... done `-- Extracting lapack-3.5.0: .......... done `-- Installing openblas-0.2.18_1,1... `-- Extracting openblas-0.2.18_1,1: ......... done `-- Installing suitesparse-4.0.2_4... `-- Extracting suitesparse-4.0.2_4: .......... done `-- Installing cblas-1.0_4... `-- Extracting cblas-1.0_4: ......... done Extracting py27-numpy-1.11.1,1: .......... done Message from ncurses-6.0_5: ===> NOTICE: The ncurses port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port Message from python27-2.7.12: =========================================================================== Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: bsddb databases/py-bsddb gdbm databases/py-gdbm sqlite3 databases/py-sqlite3 tkinter x11-toolkits/py-tkinter =========================================================================== Message from gcc5-5.4.0: To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc5 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. Message from cblas-1.0_4: ===> NOTICE: The cblas port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> py27-biopython-1.68 depends on file: /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py - found ===> Returning to build of py27-biopython-1.68 ===> py27-biopython-1.68 depends on package: py27-setuptools27>0 - found ===> py27-biopython-1.68 depends on file: /usr/local/bin/python2.7 - found ===> py27-biopython-1.68 depends on executable: python2 - not found ===> Installing existing package /packages/All/python2-2_3.txz Installing python2-2_3... Extracting python2-2_3: ...... done ===> py27-biopython-1.68 depends on executable: python2 - found ===> Returning to build of py27-biopython-1.68 =========================================================================== =================================================== =========================================================================== =================================================== ===> Configuring for py27-biopython-1.68 running config =========================================================================== =================================================== ===> Building for py27-biopython-1.68 running build running build_py creating build creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7 creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio copying Bio/bgzf.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio copying Bio/DocSQL.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio copying Bio/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio copying Bio/triefind.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio copying Bio/_utils.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio copying Bio/Index.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio copying Bio/SeqFeature.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio copying Bio/MaxEntropy.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio copying Bio/MarkovModel.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio copying Bio/SeqRecord.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio copying Bio/ParserSupport.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio copying Bio/kNN.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio copying Bio/Seq.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio copying Bio/pairwise2.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio copying Bio/NaiveBayes.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio copying Bio/LogisticRegression.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio copying Bio/File.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align copying Bio/Align/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align copying Bio/Align/AlignInfo.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align copying Bio/Align/Generic.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align/Applications copying Bio/Align/Applications/_MSAProbs.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align/Applications copying Bio/Align/Applications/_Prank.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align/Applications copying Bio/Align/Applications/_Dialign.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align/Applications copying Bio/Align/Applications/_ClustalOmega.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align/Applications copying Bio/Align/Applications/_Clustalw.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align/Applications copying Bio/Align/Applications/_Probcons.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align/Applications copying Bio/Align/Applications/_TCoffee.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align/Applications copying Bio/Align/Applications/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align/Applications copying Bio/Align/Applications/_Muscle.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align/Applications copying Bio/Align/Applications/_Mafft.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align/Applications creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/AlignIO copying Bio/AlignIO/FastaIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/AlignIO copying Bio/AlignIO/ClustalIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/AlignIO copying Bio/AlignIO/NexusIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/AlignIO copying Bio/AlignIO/StockholmIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/AlignIO copying Bio/AlignIO/Interfaces.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/AlignIO copying Bio/AlignIO/PhylipIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/AlignIO copying Bio/AlignIO/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/AlignIO copying Bio/AlignIO/EmbossIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/AlignIO creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Alphabet copying Bio/Alphabet/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Alphabet copying Bio/Alphabet/Reduced.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Alphabet copying Bio/Alphabet/IUPAC.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Alphabet creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Application copying Bio/Application/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Application creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Blast copying Bio/Blast/ParseBlastTable.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Blast copying Bio/Blast/NCBIStandalone.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Blast copying Bio/Blast/NCBIXML.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Blast copying Bio/Blast/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Blast copying Bio/Blast/Applications.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Blast copying Bio/Blast/Record.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Blast copying Bio/Blast/NCBIWWW.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Blast creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/CAPS copying Bio/CAPS/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/CAPS creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/codonalign copying Bio/codonalign/codonalphabet.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/codonalign copying Bio/codonalign/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/codonalign copying Bio/codonalign/chisq.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/codonalign copying Bio/codonalign/codonalignment.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/codonalign copying Bio/codonalign/codonseq.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/codonalign creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Compass copying Bio/Compass/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Compass creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Crystal copying Bio/Crystal/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Crystal creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Data copying Bio/Data/IUPACData.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Data copying Bio/Data/CodonTable.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Data copying Bio/Data/SCOPData.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Data copying Bio/Data/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Data creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Emboss copying Bio/Emboss/Applications.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Emboss copying Bio/Emboss/Primer3.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Emboss copying Bio/Emboss/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Emboss copying Bio/Emboss/PrimerSearch.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Emboss creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez copying Bio/Entrez/Parser.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez copying Bio/Entrez/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/ExPASy copying Bio/ExPASy/Enzyme.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/ExPASy copying Bio/ExPASy/ScanProsite.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/ExPASy copying Bio/ExPASy/Prodoc.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/ExPASy copying Bio/ExPASy/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/ExPASy copying Bio/ExPASy/Prosite.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/ExPASy creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/FSSP copying Bio/FSSP/fssp_rec.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/FSSP copying Bio/FSSP/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/FSSP copying Bio/FSSP/FSSPTools.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/FSSP creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA copying Bio/GA/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA copying Bio/GA/Organism.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA copying Bio/GA/Evolver.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Crossover copying Bio/GA/Crossover/Point.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Crossover copying Bio/GA/Crossover/General.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Crossover copying Bio/GA/Crossover/TwoPoint.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Crossover copying Bio/GA/Crossover/Uniform.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Crossover copying Bio/GA/Crossover/GeneralPoint.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Crossover copying Bio/GA/Crossover/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Crossover creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Mutation copying Bio/GA/Mutation/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Mutation copying Bio/GA/Mutation/Simple.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Mutation copying Bio/GA/Mutation/General.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Mutation creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Repair copying Bio/GA/Repair/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Repair copying Bio/GA/Repair/Stabilizing.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Repair creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Selection copying Bio/GA/Selection/Diversity.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Selection copying Bio/GA/Selection/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Selection copying Bio/GA/Selection/RouletteWheel.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Selection copying Bio/GA/Selection/Tournament.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Selection copying Bio/GA/Selection/Abstract.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Selection creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GenBank copying Bio/GenBank/Scanner.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GenBank copying Bio/GenBank/Record.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GenBank copying Bio/GenBank/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GenBank copying Bio/GenBank/utils.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GenBank creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Geo copying Bio/Geo/Record.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Geo copying Bio/Geo/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Geo creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics copying Bio/Graphics/Distribution.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics copying Bio/Graphics/Comparative.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics copying Bio/Graphics/KGML_vis.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics copying Bio/Graphics/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics copying Bio/Graphics/BasicChromosome.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics copying Bio/Graphics/DisplayRepresentation.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics copying Bio/Graphics/ColorSpiral.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Track.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Feature.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Colors.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Diagram.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Graph.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/GenomeDiagram creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/HMM copying Bio/HMM/MarkovModel.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/HMM copying Bio/HMM/DynamicProgramming.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/HMM copying Bio/HMM/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/HMM copying Bio/HMM/Utilities.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/HMM copying Bio/HMM/Trainer.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/HMM creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KEGG copying Bio/KEGG/REST.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KEGG copying Bio/KEGG/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KEGG creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KEGG/Compound copying Bio/KEGG/Compound/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KEGG/Compound creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KEGG/Enzyme copying Bio/KEGG/Enzyme/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KEGG/Enzyme creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KEGG/Map copying Bio/KEGG/Map/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KEGG/Map creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/mmtf copying Bio/PDB/mmtf/DefaultParser.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/mmtf copying Bio/PDB/mmtf/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/mmtf creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KEGG/KGML copying Bio/KEGG/KGML/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KEGG/KGML copying Bio/KEGG/KGML/KGML_parser.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KEGG/KGML copying Bio/KEGG/KGML/KGML_pathway.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KEGG/KGML creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Medline copying Bio/Medline/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Medline creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs copying Bio/motifs/mast.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs copying Bio/motifs/alignace.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs copying Bio/motifs/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs copying Bio/motifs/meme.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs copying Bio/motifs/matrix.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs copying Bio/motifs/thresholds.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs copying Bio/motifs/transfac.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs/applications copying Bio/motifs/applications/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs/applications copying Bio/motifs/applications/_xxmotif.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs/applications creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs/jaspar copying Bio/motifs/jaspar/db.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs/jaspar copying Bio/motifs/jaspar/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs/jaspar creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NeuralNetwork copying Bio/NeuralNetwork/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NeuralNetwork copying Bio/NeuralNetwork/StopTraining.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NeuralNetwork copying Bio/NeuralNetwork/Training.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NeuralNetwork creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NeuralNetwork/BackPropagation copying Bio/NeuralNetwork/BackPropagation/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NeuralNetwork/BackPropagation copying Bio/NeuralNetwork/BackPropagation/Layer.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NeuralNetwork/BackPropagation copying Bio/NeuralNetwork/BackPropagation/Network.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NeuralNetwork/BackPropagation creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NeuralNetwork/Gene copying Bio/NeuralNetwork/Gene/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NeuralNetwork/Gene copying Bio/NeuralNetwork/Gene/Motif.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NeuralNetwork/Gene copying Bio/NeuralNetwork/Gene/Schema.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NeuralNetwork/Gene copying Bio/NeuralNetwork/Gene/Pattern.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NeuralNetwork/Gene copying Bio/NeuralNetwork/Gene/Signature.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NeuralNetwork/Gene creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Nexus copying Bio/Nexus/Nexus.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Nexus copying Bio/Nexus/Nodes.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Nexus copying Bio/Nexus/StandardData.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Nexus copying Bio/Nexus/Trees.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Nexus copying Bio/Nexus/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Nexus creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NMR copying Bio/NMR/xpktools.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NMR copying Bio/NMR/NOEtools.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NMR copying Bio/NMR/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NMR creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Pathway copying Bio/Pathway/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Pathway creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Pathway/Rep copying Bio/Pathway/Rep/Graph.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Pathway/Rep copying Bio/Pathway/Rep/MultiGraph.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Pathway/Rep copying Bio/Pathway/Rep/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Pathway/Rep copying Bio/PDB/parse_pdb_header.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/Chain.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/Residue.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/PDBParser.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/Superimposer.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/StructureBuilder.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/NeighborSearch.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/Entity.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/PDBList.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/PDBIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/MMCIF2Dict.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/Structure.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/Dice.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/HSExposure.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/AbstractPropertyMap.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/PDBExceptions.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/Model.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/ResidueDepth.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/PSEA.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/Atom.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/FragmentMapper.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/DSSP.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/NACCESS.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/Selection.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/StructureAlignment.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/Vector.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/MMCIFParser.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB copying Bio/PDB/Polypeptide.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen copying Bio/PopGen/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/Async copying Bio/PopGen/Async/Local.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/Async copying Bio/PopGen/Async/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/Async creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/FDist copying Bio/PopGen/FDist/Utils.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/FDist copying Bio/PopGen/FDist/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/FDist copying Bio/PopGen/FDist/Controller.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/FDist copying Bio/PopGen/FDist/Async.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/FDist creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/LargeFileParser.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/Utils.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/EasyController.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/FileParser.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/Controller.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/GenePop creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal copying Bio/PopGen/SimCoal/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal copying Bio/PopGen/SimCoal/Cache.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal copying Bio/PopGen/SimCoal/Controller.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal copying Bio/PopGen/SimCoal/Async.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal copying Bio/PopGen/SimCoal/Template.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Restriction copying Bio/Restriction/Restriction.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Restriction copying Bio/Restriction/PrintFormat.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Restriction copying Bio/Restriction/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Restriction copying Bio/Restriction/Restriction_Dictionary.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Restriction copying Bio/Restriction/RanaConfig.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Restriction creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SCOP copying Bio/SCOP/Dom.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SCOP copying Bio/SCOP/Des.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SCOP copying Bio/SCOP/Raf.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SCOP copying Bio/SCOP/Hie.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SCOP copying Bio/SCOP/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SCOP copying Bio/SCOP/Residues.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SCOP copying Bio/SCOP/Cla.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SCOP creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO copying Bio/SearchIO/_utils.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO copying Bio/SearchIO/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO copying Bio/SearchIO/FastaIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO copying Bio/SearchIO/_index.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO copying Bio/SearchIO/BlatIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/_model copying Bio/SearchIO/_model/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/_model copying Bio/SearchIO/_model/hsp.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/_model copying Bio/SearchIO/_model/_base.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/_model copying Bio/SearchIO/_model/query.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/_model copying Bio/SearchIO/_model/hit.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/_model creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_text.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_tab.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_xml.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/BlastIO creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer2_text.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/_base.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_tab.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_text.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/HmmerIO creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_text.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/_base.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/ExonerateIO creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/IgIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/PirIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/SeqXmlIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/TabIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/SffIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/AceIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/PdbIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/PhdIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/FastaIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/SwissIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/QualityIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/Interfaces.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/_convert.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/InsdcIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/_index.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/AbiIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO copying Bio/SeqIO/UniprotIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqUtils copying Bio/SeqUtils/ProtParam.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqUtils copying Bio/SeqUtils/lcc.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqUtils copying Bio/SeqUtils/CodonUsage.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqUtils copying Bio/SeqUtils/MeltingTemp.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqUtils copying Bio/SeqUtils/CheckSum.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqUtils copying Bio/SeqUtils/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqUtils copying Bio/SeqUtils/ProtParamData.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqUtils copying Bio/SeqUtils/IsoelectricPoint.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqUtils copying Bio/SeqUtils/CodonUsageIndices.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqUtils creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Sequencing copying Bio/Sequencing/Phd.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Sequencing copying Bio/Sequencing/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Sequencing copying Bio/Sequencing/Ace.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Sequencing creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_bwa.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_Novoalign.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_samtools.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Sequencing/Applications creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Statistics copying Bio/Statistics/lowess.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Statistics copying Bio/Statistics/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Statistics creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SubsMat copying Bio/SubsMat/MatrixInfo.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SubsMat copying Bio/SubsMat/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SubsMat copying Bio/SubsMat/FreqTable.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SubsMat creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SVDSuperimposer copying Bio/SVDSuperimposer/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SVDSuperimposer creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/QCPSuperimposer copying Bio/PDB/QCPSuperimposer/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/QCPSuperimposer creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SwissProt copying Bio/SwissProt/KeyWList.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SwissProt copying Bio/SwissProt/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SwissProt creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/TogoWS copying Bio/TogoWS/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/TogoWS creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo copying Bio/Phylo/CDAOIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo copying Bio/Phylo/NewickIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo copying Bio/Phylo/NeXML.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo copying Bio/Phylo/_utils.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo copying Bio/Phylo/PhyloXML.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo copying Bio/Phylo/_cdao_owl.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo copying Bio/Phylo/BaseTree.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo copying Bio/Phylo/NeXMLIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo copying Bio/Phylo/CDAO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo copying Bio/Phylo/Consensus.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo copying Bio/Phylo/PhyloXMLIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo copying Bio/Phylo/NexusIO.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo copying Bio/Phylo/TreeConstruction.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo copying Bio/Phylo/_io.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo copying Bio/Phylo/Newick.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo copying Bio/Phylo/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Fasttree.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Phyml.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/Applications copying Bio/Phylo/Applications/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Raxml.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/Applications creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_codeml.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/baseml.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/chi2.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_baseml.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/codeml.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_yn00.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/yn00.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/_paml.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/PAML creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/UniGene copying Bio/UniGene/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/UniGene creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/UniProt copying Bio/UniProt/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/UniProt copying Bio/UniProt/GOA.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/UniProt creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Wise copying Bio/Wise/psw.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Wise copying Bio/Wise/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Wise copying Bio/Wise/dnal.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Wise creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/_py3k copying Bio/_py3k/_ordereddict.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/_py3k copying Bio/_py3k/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/_py3k creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/BioSQL copying BioSQL/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/BioSQL copying BioSQL/BioSeqDatabase.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/BioSQL copying BioSQL/BioSeq.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/BioSQL copying BioSQL/Loader.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/BioSQL copying BioSQL/DBUtils.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/BioSQL creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Affy copying Bio/Affy/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Affy copying Bio/Affy/CelFile.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Affy creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Cluster copying Bio/Cluster/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Cluster creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KDTree copying Bio/KDTree/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KDTree copying Bio/KDTree/KDTree.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KDTree creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/phenotype copying Bio/phenotype/pm_fitting.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/phenotype copying Bio/phenotype/phen_micro.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/phenotype copying Bio/phenotype/__init__.py -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/phenotype creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/HomoloGene.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/SP_General.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Pub.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Sequence.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PubMed.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PDB_General.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqset.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmserials_080101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSummary_041029.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSpell.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PRF_General.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NSE.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_020114.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_080101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_140101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Protein.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_090101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_100301.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_4.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PIR_General.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medlars.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_0.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pmc-1.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/SP_General.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_150101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/OMSSA.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_110101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eLink_101123.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Variation.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eLink_090910.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Biblio.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/HomoloGene.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_080101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Access.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/GenBank_General.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_120101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mim.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TxInit.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Rsite.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_130101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/ePost_020511.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_130101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NSE.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_150101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PDB_General.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_090101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/esearch.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/taxon.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_General.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Features.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cdd.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Submit.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmserials_100101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqres.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/egquery.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/htmltable.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_all.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_011101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioSource.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_RNA.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/EMBL_General.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_1.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/GenBank_General.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_011101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mime.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSearch_020511.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Project.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/einfo.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivearticle.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/elink_020122.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_3.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PRF_General.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_080101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Remap.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/esummary-v1.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioTree.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TSeq.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_2.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_110101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Systems.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_General.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_140101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PIR_General.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/EMBL_General.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eInfo_020511.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_090101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medline.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Organism.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_120101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_100101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_100301.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Gene.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml2.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/OMSSA.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_130501.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Blast4.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isonum.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk4.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/notat.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/modules.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/articlemeta.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/default-classes.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-modules.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/para.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsb.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/default-mixes.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsn.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isocyr2.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/xmlspecchars.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/link.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/references.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/backmatter.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/journalmeta.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomopf.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/chars.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-models.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk1.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/math.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-classes.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isopub.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isolat1.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsa.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mmlextra.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isodia.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamso.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/list.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/display.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomscr.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mmlalias.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/section.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsc.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk3.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/XHTMLtablesetup.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/format.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/common.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isotech.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk2.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isolat2.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-mixes.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/phrase.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isobox.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsr.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathmlsetup.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomfrk.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isocyr1.ent -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml2-qname-1.mod -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs creating build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/simple.par -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/split_ssm_2d.par -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/bottle.par -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/ssm_1d.par -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/ssm_2d.par -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/split_island.par -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/split_ssm_1d.par -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/decline_split.par -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/island.par -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/decline_lambda.par -> build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/data running build_ext building 'Bio.cpairwise2' extension creating build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7 creating build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/local/include/python2.7 -c Bio/cpairwise2module.c -o build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/cpairwise2module.o cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/cpairwise2module.o -L/usr/local/lib -lpython2.7 -o build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/cpairwise2.so building 'Bio.trie' extension cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -IBio -I/usr/local/include/python2.7 -c Bio/triemodule.c -o build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/triemodule.o cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -IBio -I/usr/local/include/python2.7 -c Bio/trie.c -o build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/trie.o cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/triemodule.o build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/trie.o -L/usr/local/lib -lpython2.7 -o build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/trie.so building 'Bio.Nexus.cnexus' extension creating build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Nexus cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/local/include/python2.7 -c Bio/Nexus/cnexus.c -o build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Nexus/cnexus.o cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Nexus/cnexus.o -L/usr/local/lib -lpython2.7 -o build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Nexus/cnexus.so building 'Bio.Cluster.cluster' extension creating build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Cluster cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c Bio/Cluster/clustermodule.c -o build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Cluster/clustermodule.o cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c Bio/Cluster/cluster.c -o build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Cluster/cluster.o cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Cluster/clustermodule.o build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Cluster/cluster.o -L/usr/local/lib -lpython2.7 -o build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Cluster/cluster.so building 'Bio.KDTree._CKDTree' extension creating build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KDTree cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c Bio/KDTree/KDTree.c -o build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KDTree/KDTree.o cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c Bio/KDTree/KDTreemodule.c -o build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KDTree/KDTreemodule.o cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KDTree/KDTree.o build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KDTree/KDTreemodule.o -L/usr/local/lib -lpython2.7 -o build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KDTree/_CKDTree.so building 'Bio.motifs._pwm' extension creating build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c Bio/motifs/_pwm.c -o build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs/_pwm.o cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs/_pwm.o -L/usr/local/lib -lpython2.7 -o build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs/_pwm.so building 'Bio.PDB.QCPSuperimposer.qcprotmodule' extension creating build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB creating build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/QCPSuperimposer cc -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c Bio/PDB/QCPSuperimposer/qcprotmodule.c -o build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/QCPSuperimposer/qcprotmodule.o cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/QCPSuperimposer/qcprotmodule.o -L/usr/local/lib -lpython2.7 -o build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/QCPSuperimposer/qcprotmodule.so =========================================================================== =================================================== ===> py27-biopython-1.68 depends on file: /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py - found ===> py27-biopython-1.68 depends on package: py27-reportlab1>0 - not found ===> Installing existing package /packages/All/py27-reportlab1-1.21.2_3.txz Installing py27-reportlab1-1.21.2_3... Extracting py27-reportlab1-1.21.2_3: .......... done Message from py27-reportlab1-1.21.2_3: ======================================================= You may need to install print/adobe-cmaps port to use East Asian languages. ======================================================= ===> py27-biopython-1.68 depends on package: py27-reportlab1>0 - found ===> Returning to build of py27-biopython-1.68 ===> py27-biopython-1.68 depends on package: py27-setuptools27>0 - found ===> py27-biopython-1.68 depends on file: /usr/local/bin/python2.7 - found ===> py27-biopython-1.68 depends on executable: python2 - found =========================================================================== =================================================== ===> Staging for py27-biopython-1.68 ===> Generating temporary packing list running install running build running build_py running build_ext running install_lib creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7 creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/cpairwise2.so -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SwissProt copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SwissProt/KeyWList.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SwissProt copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SwissProt/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SwissProt creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/Parser.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/pubmed_120101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_TxInit.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/journalmeta.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Mime.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/eLink_090910.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Medline.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/section.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/isolat1.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/einfo.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/PDB_General.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/egquery.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/MMDB_Features.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/nlmcommon_090101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/pubmed_130101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/phrase.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/isopub.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/isoamsn.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/MMDB.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/ePost_020511.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Remap.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/isocyr1.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/pubmed_020114.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/pmc-1.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/mmlextra.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/Docsum_3_0.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/list.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/PRF_General.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/isogrk4.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/isobox.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/isoamsb.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Sequence.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/nlmmedline_011101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_BioSource.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/default-mixes.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/mathmlsetup.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Access.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/eLink_101123.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/isomscr.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/nlmcommon_011101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/HomoloGene.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/isoamsr.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/pubmed_130501.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Gene.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/bookdoc_150101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/Docsum_3_4.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/chars.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/mmlalias.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/HomoloGene.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Pub.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Submit.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/isoamso.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/GenBank_General.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/MMDB.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/taxon.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_RNA.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Variation.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/pubmed_100101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/para.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/isomfrk.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/archivearticle.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/backmatter.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/nlmcommon_080101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/isotech.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/bookdoc_140101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/Docsum_3_1.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/mathml2-qname-1.mod -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/htmltable.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/bookdoc_100301.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/nlmserials_080101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/PRF_General.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/eSpell.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Project.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/pubmed_100301.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/OMSSA.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/pubmed_090101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/bookdoc_110101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/archivecustom-classes.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/nlmserials_100101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/archivecustom-models.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/mathml2.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_General.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/math.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/archivecustom-mixes.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Biblio.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/bookdoc_130101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/link.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/notat.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/common.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/esearch.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/display.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/PIR_General.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/modules.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/archivecustom-modules.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_BioTree.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Mim.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NSE.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Seqres.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/isogrk2.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/GenBank_General.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/pubmed_140101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/format.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/isogrk1.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NSE.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/default-classes.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/EMBL_General.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/xmlspecchars.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Blast4.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/isonum.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Protein.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_TSeq.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/bookdoc_120101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/pubmed_150101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/PDB_General.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Systems.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/references.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/pubmed_080101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/SP_General.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_PubMed.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/eSearch_020511.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_all.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/isolat2.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/eInfo_020511.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/pubmed_110101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Rsite.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Medlars.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/articlemeta.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Organism.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/esummary-v1.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/isodia.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/nlmmedline_090101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/isomopf.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/PIR_General.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Seqset.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/elink_020122.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_General.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Cdd.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/XHTMLtablesetup.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/isoamsc.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/isoamsa.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/eSummary_041029.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/isogrk3.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/EMBL_General.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/Docsum_3_3.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/nlmmedline_080101.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/isocyr2.ent -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/OMSSA.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/SP_General.mod.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Entrez/DTDs/Docsum_3_2.dtd -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/DTDs creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Crystal copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Crystal/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Crystal creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Application copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Application/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Application copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/File.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/phenotype copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/phenotype/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/phenotype copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/phenotype/pm_fitting.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/phenotype copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/phenotype/phen_micro.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/phenotype copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/kNN.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SVDSuperimposer copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SVDSuperimposer/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SVDSuperimposer copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/pairwise2.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/triefind.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/bgzf.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Geo copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Geo/Record.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Geo copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Geo/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Geo copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/MaxEntropy.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqUtils/ProtParamData.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqUtils/lcc.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqUtils/CodonUsage.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqUtils/ProtParam.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqUtils/CodonUsageIndices.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqUtils/IsoelectricPoint.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqUtils/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqUtils/CheckSum.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqUtils/MeltingTemp.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Statistics copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Statistics/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Statistics copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Statistics/lowess.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Statistics creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/Map copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KEGG/Map/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/Map creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/KGML copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KEGG/KGML/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/KGML copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KEGG/KGML/KGML_parser.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/KGML copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KEGG/KGML/KGML_pathway.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/KGML copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KEGG/REST.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KEGG/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/Compound copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KEGG/Compound/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/Compound creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/Enzyme copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KEGG/Enzyme/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/Enzyme creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/TogoWS copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/TogoWS/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/TogoWS copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NaiveBayes.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Index.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/ExonerateIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/ExonerateIO/exonerate_text.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/ExonerateIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/ExonerateIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/ExonerateIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/ExonerateIO/_base.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/ExonerateIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/ExonerateIO/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/ExonerateIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/_utils.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/_model copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/_model/hit.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/_model copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/_model/query.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/_model copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/_model/_base.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/_model copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/_model/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/_model copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/_model/hsp.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/_model creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/HmmerIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/HmmerIO/hmmer3_text.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/HmmerIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/HmmerIO/hmmer3_tab.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/HmmerIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/HmmerIO/_base.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/HmmerIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/HmmerIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/HmmerIO/hmmer2_text.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/HmmerIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/HmmerIO/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/HmmerIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/BlatIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/BlastIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/BlastIO/blast_xml.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/BlastIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/BlastIO/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/BlastIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/BlastIO/blast_tab.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/BlastIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/BlastIO/blast_text.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/BlastIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/_index.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SearchIO/FastaIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/AlignIO/StockholmIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/AlignIO/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/AlignIO/NexusIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/AlignIO/EmbossIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/AlignIO/FastaIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/AlignIO/PhylipIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/AlignIO/ClustalIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/AlignIO/Interfaces.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NeuralNetwork/StopTraining.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NeuralNetwork/Training.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NeuralNetwork/Gene/Schema.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NeuralNetwork/Gene/Pattern.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NeuralNetwork/Gene/Signature.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NeuralNetwork/Gene/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NeuralNetwork/Gene/Motif.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NeuralNetwork/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/BackPropagation copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NeuralNetwork/BackPropagation/Network.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/BackPropagation copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NeuralNetwork/BackPropagation/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/BackPropagation copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NeuralNetwork/BackPropagation/Layer.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/BackPropagation creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Nexus copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Nexus/cnexus.so -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Nexus copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Nexus/StandardData.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Nexus copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Nexus/Trees.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Nexus copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Nexus/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Nexus copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Nexus/Nexus.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Nexus copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Nexus/Nodes.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Nexus creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SCOP copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SCOP/Des.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SCOP copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SCOP/Dom.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SCOP copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SCOP/Cla.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SCOP copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SCOP/Residues.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SCOP copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SCOP/Raf.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SCOP copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SCOP/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SCOP copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SCOP/Hie.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SCOP creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SubsMat copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SubsMat/MatrixInfo.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SubsMat copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SubsMat/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SubsMat copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SubsMat/FreqTable.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SubsMat copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/_utils.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align/Generic.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align/Applications/_Muscle.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align/Applications/_TCoffee.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align/Applications/_MSAProbs.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align/Applications/_Mafft.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align/Applications/_Dialign.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align/Applications/_Clustalw.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align/Applications/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align/Applications/_Probcons.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align/Applications/_Prank.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align/Applications/_ClustalOmega.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align/AlignInfo.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Align/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/_py3k copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/_py3k/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/_py3k copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/_py3k/_ordereddict.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/_py3k creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KDTree copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KDTree/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KDTree copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KDTree/_CKDTree.so -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KDTree copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/KDTree/KDTree.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KDTree creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/GenePop copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/GenePop/LargeFileParser.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/GenePop copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/GenePop/Controller.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/GenePop copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/GenePop/FileParser.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/GenePop copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/GenePop/EasyController.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/GenePop copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/GenePop/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/GenePop copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/GenePop/Utils.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/GenePop copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/FDist copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/FDist/Utils.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/FDist copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/FDist/Async.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/FDist copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/FDist/Controller.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/FDist copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/FDist/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/FDist creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/Async.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/Controller.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/Cache.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/Template.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/data/split_island.par -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/data/decline_split.par -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/data/decline_lambda.par -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/data/split_ssm_1d.par -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/data/island.par -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/data/bottle.par -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/data/split_ssm_2d.par -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/data/ssm_2d.par -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/data/simple.par -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/data/ssm_1d.par -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/SimCoal/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/Async copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/Async/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/Async copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PopGen/Async/Local.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/Async copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqFeature.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NMR copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NMR/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NMR copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NMR/NOEtools.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NMR copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/NMR/xpktools.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NMR creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GenBank copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GenBank/Record.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GenBank copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GenBank/utils.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GenBank copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GenBank/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GenBank copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GenBank/Scanner.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GenBank creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/TreeConstruction.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/CDAOIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/Newick.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/NexusIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/NewickIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/NeXMLIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/CDAO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/Consensus.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/PhyloXML.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/Applications copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/Applications/_Phyml.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/Applications copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/Applications/_Fasttree.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/Applications copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/Applications/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/Applications copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/Applications/_Raxml.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/Applications copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/BaseTree.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/PAML/_parse_baseml.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/PAML/baseml.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/PAML/codeml.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/PAML/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/PAML/chi2.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/PAML/_parse_yn00.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/PAML/_paml.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/PAML/_parse_codeml.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/PAML/yn00.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/NeXML.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/_utils.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/PhyloXMLIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/_io.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Phylo/_cdao_owl.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Pathway copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Pathway/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Pathway creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Pathway/Rep copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Pathway/Rep/Graph.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Pathway/Rep copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Pathway/Rep/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Pathway/Rep copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Pathway/Rep/MultiGraph.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Pathway/Rep copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/ParserSupport.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/KGML_vis.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/Distribution.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/Comparative.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/ColorSpiral.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/BasicChromosome.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/GenomeDiagram/_Graph.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/GenomeDiagram/_FeatureSet.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/GenomeDiagram/_GraphSet.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/GenomeDiagram/_Colors.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/GenomeDiagram/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/GenomeDiagram/_Diagram.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/GenomeDiagram/_Feature.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/GenomeDiagram/_CrossLink.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/GenomeDiagram/_Track.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Graphics/DisplayRepresentation.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/LogisticRegression.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Evolver.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Organism.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Mutation copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Mutation/Simple.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Mutation copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Mutation/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Mutation copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Mutation/General.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Mutation creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Selection copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Selection/Tournament.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Selection copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Selection/Abstract.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Selection copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Selection/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Selection copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Selection/Diversity.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Selection copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Selection/RouletteWheel.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Selection creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Repair copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Repair/Stabilizing.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Repair copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Repair/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Repair copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Crossover/Uniform.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Crossover/Point.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Crossover/General.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Crossover/TwoPoint.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Crossover/GeneralPoint.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/GA/Crossover/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/UniGene copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/UniGene/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/UniGene creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/StructureBuilder.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/Atom.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/PDBList.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/PSEA.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/MMCIF2Dict.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/Dice.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/ResidueDepth.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/StructureAlignment.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/Entity.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/NeighborSearch.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/Model.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/Superimposer.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/Polypeptide.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/Selection.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/MMCIFParser.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/Structure.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/PDBExceptions.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/mmtf copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/mmtf/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/mmtf copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/mmtf/DefaultParser.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/mmtf copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/AbstractPropertyMap.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/HSExposure.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/QCPSuperimposer copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/QCPSuperimposer/qcprotmodule.so -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/QCPSuperimposer copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/QCPSuperimposer/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/QCPSuperimposer copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/PDBIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/parse_pdb_header.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/NACCESS.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/PDBParser.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/Vector.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/DSSP.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/Residue.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/Chain.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/PDB/FragmentMapper.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Sequencing/Ace.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing/Applications copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Sequencing/Applications/_samtools.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing/Applications copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Sequencing/Applications/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing/Applications copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Sequencing/Applications/_Novoalign.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing/Applications copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Sequencing/Applications/_bwa.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing/Applications copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Sequencing/Phd.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Sequencing/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqRecord.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Affy copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Affy/CelFile.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Affy copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Affy/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Affy creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/codonalign copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/codonalign/chisq.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/codonalign copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/codonalign/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/codonalign copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/codonalign/codonalphabet.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/codonalign copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/codonalign/codonseq.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/codonalign copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/codonalign/codonalignment.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/codonalign creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Data copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Data/IUPACData.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Data copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Data/CodonTable.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Data copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Data/SCOPData.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Data copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Data/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Data creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Wise copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Wise/dnal.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Wise copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Wise/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Wise copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Wise/psw.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Wise creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Medline copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Medline/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Medline creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/HMM copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/HMM/Trainer.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/HMM copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/HMM/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/HMM copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/HMM/Utilities.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/HMM copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/HMM/MarkovModel.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/HMM copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/HMM/DynamicProgramming.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/HMM creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/motifs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs/_pwm.so -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/motifs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/motifs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs/alignace.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/motifs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs/transfac.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/motifs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs/meme.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/motifs creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/motifs/applications copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs/applications/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/motifs/applications copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs/applications/_xxmotif.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/motifs/applications copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs/mast.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/motifs copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs/matrix.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/motifs creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/motifs/jaspar copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs/jaspar/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/motifs/jaspar copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs/jaspar/db.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/motifs/jaspar copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/motifs/thresholds.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/motifs creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO/AceIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO/QualityIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO/AbiIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO/Interfaces.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO/PdbIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO/PirIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO/SffIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO/SwissIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO/_index.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO/InsdcIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO/FastaIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO/IgIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO/TabIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO/UniprotIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO/_convert.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO/PhdIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO/SeqXmlIO.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/SeqIO/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqIO creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/ExPASy copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/ExPASy/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/ExPASy copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/ExPASy/Enzyme.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/ExPASy copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/ExPASy/Prosite.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/ExPASy copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/ExPASy/ScanProsite.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/ExPASy copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/ExPASy/Prodoc.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/ExPASy creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Cluster copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Cluster/cluster.so -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Cluster copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Cluster/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Cluster creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/UniProt copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/UniProt/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/UniProt copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/UniProt/GOA.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/UniProt copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/MarkovModel.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Alphabet copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Alphabet/IUPAC.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Alphabet copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Alphabet/Reduced.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Alphabet copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Alphabet/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Alphabet creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Blast copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Blast/NCBIStandalone.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Blast copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Blast/NCBIXML.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Blast copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Blast/NCBIWWW.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Blast copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Blast/Record.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Blast copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Blast/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Blast copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Blast/Applications.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Blast copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Blast/ParseBlastTable.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Blast creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Restriction copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Restriction/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Restriction copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Restriction/PrintFormat.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Restriction copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Restriction/Restriction.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Restriction copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Restriction/Restriction_Dictionary.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Restriction copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Restriction/RanaConfig.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Restriction creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/FSSP copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/FSSP/fssp_rec.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/FSSP copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/FSSP/FSSPTools.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/FSSP copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/FSSP/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/FSSP creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Compass copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Compass/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Compass creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Emboss copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Emboss/Primer3.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Emboss copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Emboss/Applications.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Emboss copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Emboss/PrimerSearch.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Emboss copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Emboss/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Emboss copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/Seq.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/DocSQL.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/CAPS copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/CAPS/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/CAPS copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/Bio/trie.so -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio creating /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/BioSQL copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/BioSQL/BioSeqDatabase.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/BioSQL copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/BioSQL/Loader.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/BioSQL copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/BioSQL/DBUtils.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/BioSQL copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/BioSQL/__init__.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/BioSQL copying build/lib.dragonfly-4.7-DEVELOPMENT-x86_64-2.7/BioSQL/BioSeq.py -> /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/BioSQL byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SwissProt/KeyWList.py to KeyWList.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SwissProt/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/Parser.py to Parser.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Entrez/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Crystal/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Application/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/File.py to File.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/phenotype/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/phenotype/pm_fitting.py to pm_fitting.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/phenotype/phen_micro.py to phen_micro.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/kNN.py to kNN.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SVDSuperimposer/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/pairwise2.py to pairwise2.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/triefind.py to triefind.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/bgzf.py to bgzf.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Geo/Record.py to Record.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Geo/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/MaxEntropy.py to MaxEntropy.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils/ProtParamData.py to ProtParamData.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils/lcc.py to lcc.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils/CodonUsage.py to CodonUsage.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils/ProtParam.py to ProtParam.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils/CodonUsageIndices.py to CodonUsageIndices.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils/IsoelectricPoint.py to IsoelectricPoint.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils/CheckSum.py to CheckSum.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqUtils/MeltingTemp.py to MeltingTemp.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Statistics/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Statistics/lowess.py to lowess.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/Map/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/KGML/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/KGML/KGML_parser.py to KGML_parser.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/KGML/KGML_pathway.py to KGML_pathway.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/REST.py to REST.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/Compound/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KEGG/Enzyme/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/TogoWS/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NaiveBayes.py to NaiveBayes.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Index.py to Index.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/ExonerateIO/exonerate_text.py to exonerate_text.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/ExonerateIO/exonerate_cigar.py to exonerate_cigar.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py to exonerate_vulgar.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/ExonerateIO/_base.py to _base.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/ExonerateIO/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/_utils.py to _utils.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/_model/hit.py to hit.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/_model/query.py to query.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/_model/_base.py to _base.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/_model/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/_model/hsp.py to hsp.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/HmmerIO/hmmer3_text.py to hmmer3_text.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/HmmerIO/hmmer3_tab.py to hmmer3_tab.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/HmmerIO/_base.py to _base.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/HmmerIO/hmmer3_domtab.py to hmmer3_domtab.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/HmmerIO/hmmer2_text.py to hmmer2_text.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/HmmerIO/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/BlatIO.py to BlatIO.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/BlastIO/blast_xml.py to blast_xml.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/BlastIO/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/BlastIO/blast_tab.py to blast_tab.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/BlastIO/blast_text.py to blast_text.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/_index.py to _index.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SearchIO/FastaIO.py to FastaIO.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO/StockholmIO.py to StockholmIO.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO/NexusIO.py to NexusIO.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO/EmbossIO.py to EmbossIO.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO/FastaIO.py to FastaIO.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO/PhylipIO.py to PhylipIO.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO/ClustalIO.py to ClustalIO.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/AlignIO/Interfaces.py to Interfaces.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/StopTraining.py to StopTraining.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/Training.py to Training.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene/Schema.py to Schema.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene/Pattern.py to Pattern.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene/Signature.py to Signature.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene/Motif.py to Motif.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/BackPropagation/Network.py to Network.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/BackPropagation/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NeuralNetwork/BackPropagation/Layer.py to Layer.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Nexus/StandardData.py to StandardData.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Nexus/Trees.py to Trees.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Nexus/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Nexus/Nexus.py to Nexus.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Nexus/Nodes.py to Nodes.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SCOP/Des.py to Des.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SCOP/Dom.py to Dom.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SCOP/Cla.py to Cla.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SCOP/Residues.py to Residues.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SCOP/Raf.py to Raf.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SCOP/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SCOP/Hie.py to Hie.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SubsMat/MatrixInfo.py to MatrixInfo.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SubsMat/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SubsMat/FreqTable.py to FreqTable.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/_utils.py to _utils.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Generic.py to Generic.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications/_Muscle.py to _Muscle.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications/_TCoffee.py to _TCoffee.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications/_MSAProbs.py to _MSAProbs.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications/_Mafft.py to _Mafft.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications/_Dialign.py to _Dialign.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications/_Clustalw.py to _Clustalw.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications/_Probcons.py to _Probcons.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications/_Prank.py to _Prank.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align/Applications/_ClustalOmega.py to _ClustalOmega.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align/AlignInfo.py to AlignInfo.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Align/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/_py3k/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/_py3k/_ordereddict.py to _ordereddict.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KDTree/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/KDTree/KDTree.py to KDTree.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/GenePop/LargeFileParser.py to LargeFileParser.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/GenePop/Controller.py to Controller.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/GenePop/FileParser.py to FileParser.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/GenePop/EasyController.py to EasyController.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/GenePop/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/GenePop/Utils.py to Utils.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/FDist/Utils.py to Utils.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/FDist/Async.py to Async.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/FDist/Controller.py to Controller.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/FDist/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/Async.py to Async.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/Controller.py to Controller.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/Cache.py to Cache.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/Template.py to Template.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/SimCoal/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/Async/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PopGen/Async/Local.py to Local.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqFeature.py to SeqFeature.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NMR/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NMR/NOEtools.py to NOEtools.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/NMR/xpktools.py to xpktools.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GenBank/Record.py to Record.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GenBank/utils.py to utils.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GenBank/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GenBank/Scanner.py to Scanner.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/TreeConstruction.py to TreeConstruction.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/CDAOIO.py to CDAOIO.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/Newick.py to Newick.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/NexusIO.py to NexusIO.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/NewickIO.py to NewickIO.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/NeXMLIO.py to NeXMLIO.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/CDAO.py to CDAO.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/Consensus.py to Consensus.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PhyloXML.py to PhyloXML.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/Applications/_Phyml.py to _Phyml.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/Applications/_Fasttree.py to _Fasttree.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/Applications/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/Applications/_Raxml.py to _Raxml.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/BaseTree.py to BaseTree.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML/_parse_baseml.py to _parse_baseml.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML/baseml.py to baseml.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML/codeml.py to codeml.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML/chi2.py to chi2.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML/_parse_yn00.py to _parse_yn00.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML/_paml.py to _paml.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML/_parse_codeml.py to _parse_codeml.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PAML/yn00.py to yn00.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/NeXML.py to NeXML.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/_utils.py to _utils.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/PhyloXMLIO.py to PhyloXMLIO.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/_io.py to _io.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Phylo/_cdao_owl.py to _cdao_owl.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Pathway/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Pathway/Rep/Graph.py to Graph.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Pathway/Rep/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Pathway/Rep/MultiGraph.py to MultiGraph.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/ParserSupport.py to ParserSupport.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/KGML_vis.py to KGML_vis.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/Distribution.py to Distribution.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/Comparative.py to Comparative.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/ColorSpiral.py to ColorSpiral.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/BasicChromosome.py to BasicChromosome.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram/_Graph.py to _Graph.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram/_CircularDrawer.py to _CircularDrawer.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram/_FeatureSet.py to _FeatureSet.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram/_GraphSet.py to _GraphSet.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram/_Colors.py to _Colors.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram/_Diagram.py to _Diagram.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram/_Feature.py to _Feature.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram/_CrossLink.py to _CrossLink.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram/_LinearDrawer.py to _LinearDrawer.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py to _AbstractDrawer.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram/_Track.py to _Track.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Graphics/DisplayRepresentation.py to DisplayRepresentation.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/LogisticRegression.py to LogisticRegression.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Evolver.py to Evolver.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Organism.py to Organism.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Mutation/Simple.py to Simple.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Mutation/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Mutation/General.py to General.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Selection/Tournament.py to Tournament.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Selection/Abstract.py to Abstract.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Selection/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Selection/Diversity.py to Diversity.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Selection/RouletteWheel.py to RouletteWheel.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Repair/Stabilizing.py to Stabilizing.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Repair/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover/Uniform.py to Uniform.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover/Point.py to Point.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover/General.py to General.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover/TwoPoint.py to TwoPoint.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover/GeneralPoint.py to GeneralPoint.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/GA/Crossover/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/UniGene/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/StructureBuilder.py to StructureBuilder.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/Atom.py to Atom.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/PDBList.py to PDBList.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/PSEA.py to PSEA.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/MMCIF2Dict.py to MMCIF2Dict.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/Dice.py to Dice.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/ResidueDepth.py to ResidueDepth.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/StructureAlignment.py to StructureAlignment.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/Entity.py to Entity.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/NeighborSearch.py to NeighborSearch.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/Model.py to Model.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/Superimposer.py to Superimposer.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/Polypeptide.py to Polypeptide.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/Selection.py to Selection.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/MMCIFParser.py to MMCIFParser.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/Structure.py to Structure.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/PDBExceptions.py to PDBExceptions.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/mmtf/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/mmtf/DefaultParser.py to DefaultParser.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/AbstractPropertyMap.py to AbstractPropertyMap.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/HSExposure.py to HSExposure.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/QCPSuperimposer/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/PDBIO.py to PDBIO.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/parse_pdb_header.py to parse_pdb_header.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/NACCESS.py to NACCESS.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/PDBParser.py to PDBParser.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/Vector.py to Vector.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/DSSP.py to DSSP.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/Residue.py to Residue.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/Chain.py to Chain.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/PDB/FragmentMapper.py to FragmentMapper.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing/Ace.py to Ace.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing/Applications/_samtools.py to _samtools.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing/Applications/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing/Applications/_Novoalign.py to _Novoalign.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing/Applications/_bwa.py to _bwa.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing/Phd.py to Phd.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Sequencing/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/SeqRecord.py to SeqRecord.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Affy/CelFile.py to CelFile.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Affy/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/codonalign/chisq.py to chisq.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/codonalign/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/codonalign/codonalphabet.py to codonalphabet.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/codonalign/codonseq.py to codonseq.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/codonalign/codonalignment.py to codonalignment.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Data/IUPACData.py to IUPACData.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Data/CodonTable.py to CodonTable.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Data/SCOPData.py to SCOPData.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Data/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Wise/dnal.py to dnal.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Wise/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Wise/psw.py to psw.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/Medline/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/HMM/Trainer.py to Trainer.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/HMM/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/HMM/Utilities.py to Utilities.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/HMM/MarkovModel.py to MarkovModel.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/HMM/DynamicProgramming.py to DynamicProgramming.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/motifs/__init__.py to __init__.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/motifs/alignace.py to alignace.pyc byte-compiling /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/Bio/motifs/transfac.py to transfac.pyc byte-compiling 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names to biopython.egg-info/top_level.txt writing dependency_links to biopython.egg-info/dependency_links.txt writing manifest file 'biopython.egg-info/SOURCES.txt' reading manifest file 'biopython.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '*.py{}' found anywhere in distribution warning: no previously-included files matching '*.py-e' found anywhere in distribution writing manifest file 'biopython.egg-info/SOURCES.txt' Copying biopython.egg-info to /wrkdirs/biology/py-biopython/stage/usr/local/lib/python2.7/site-packages/biopython-1.68-py2.7.egg-info writing list of installed files to '/wrkdirs/biology/py-biopython/.PLIST.pymodtmp' ====> Compressing man pages (compress-man) =========================================================================== =================================================== ===> Building package for py27-biopython-1.68 file sizes/checksums [1303]: .......... done packing files [1303]: .......... done packing directories [0]: . done =========================================================================== => Cleaning up wrkdir ===> Cleaning for py27-biopython-1.68 build of biology/py-biopython ended at Sat Oct 8 16:28:12 PDT 2016 build time: 00:01:24